Swimming abilities of juvenile estuarine fishes: implications for passage at water control structures

The capability of early life history stage fishes to access nursery habitat within managed salt marshes is dependent on their ability to negotiate water control structures (WCSs). Knowledge of swimming ability and hydrodynamic preferences is essential to assess the impact of WCSs on fish movement in managed marshes. These data, however, are lacking for many common estuarine fishes, and the utility of the data for the few species examined thus far is limited. We examined critical swimming speeds and derived linear relationships between fish size and swimming speed for juveniles of six common estuarine fish species of the southeast U.S. and northern Gulf of Mexico coasts. White mullet Mugil curema displayed the greatest swimming ability among these six species and was able to swim against currents ≥ 30 cm s^?1 higher than the other species examined at the same size. The remaining species displayed lower critical swimming speeds and were classified into groups of moderate (pinfish Lagodon rhomboides, striped mullet Mugil cephalus) or slow (silver perch Bairdiella chrysoura, spotfin mojarra Eucinostomus argenteus, spot Leiostomus xanthurus) swimmers. Our results suggest that high-flow conditions at WCSs would likely preclude the passage of all but the largest juvenile fishes, and passage for most juveniles would occur under low-flow conditions; these flows at WCSs are dictated largely by site-specific tidal and weather conditions.     

Predation on crown-of-thorns starfish larvae by damselfishes

Examining the functional response of predators can provide insight into the role of predation in structuring prey populations and ecological communities. This study explored feeding behaviour and functional responses of planktivorous damselfishes when offered captive reared larvae of crown-of-thorns starfish, Acanthaster sp., with the aim of determining whether these predators could ever play a role in moderating outbreaks of Acanthaster sp. We examined predatory behaviour of 11 species of planktivorous damselfish, testing: (1) the relationship between predator size and predation rate, both within and among fish species; (2) consumption rates on larvae of Acanthaster sp. versus larvae of a common, co-occurring coral reef asteroid Linckia laevigata; (3) maximal feeding rates upon both Acanthaster sp. and L. laevigata; and (4) functional responses of planktivorous fishes to increasing densities of Acanthaster sp. Consumption rates of crown-of-thorns larvae by damselfishes were independent of predator size; however, there was a significant negative relationship between predator size and consumption rate of L. laevigata, when pooling across all predatory species. Some damselfishes, including Acanthochromis polyacanthus and Amblyglyphidodon curacao, consumed larval Acanthaster sp. at a greater rate than for L. laevigata. Most predatory species (all except A. curacao and Pomacentrus amboinensis) exhibited a Type II functional response whereby the increasing feeding rate decelerated with increasing prey density. In addition to revealing that a wide range of planktivorous fishes can prey upon larvae of Acanthaster sp., these data suggest that planktivorous damselfishes may have the capacity to buffer against population fluctuations of Acanthaster sp. Importantly, predators with Type II functional responses often contribute to stability of prey populations, though planktivorous fishes may be swamped by an abnormally high influx of larvae, potentially contributing to the characteristic population fluctuations of Acanthaster sp.     

Inconsistency between salinity preference and habitat salinity in euryhaline gobiid fishes in the Isazu River,northern Kyoto Prefecture

Adults of three amphidromous gobiid fishes, Tridentiger brevispinis, Rhinogobius similis, and Gymnogobius petschiliensis, are euryhaline and generally found in both freshwater (FW) and brackish water (BW) areas. The determining factors for their choice of habitat with different salinity have never been explored. In this study, a salinity-choice experiment was conducted using the above species captured in the FW region of the Isazu River, northern Kyoto Prefecture. For comparison, the fluvial goby Rhinogobius flumineus and BW-acclimated G. petschiliensis were also tested. We found that the three euryhaline species, including BW-acclimated G. petschiliensis, preferred BW to FW, whereas R. flumineus preferred FW. These results suggest that salinity preference did not determine habitat in these euryhaline gobiids, which were found in FW. Surveys were also conducted focusing on competitors and predators in their potential habitats. Thus, net sampling captured many other gobiid species, and an environmental DNA method detected Japanese temperate bass, a voracious predator, in the estuarine areas, suggesting that biotic factors are major determinants in the distribution of euryhaline species.     

Estuarine fish behavior around slotted water control structures in a managed salt marsh

Estuaries are composed of multiple interconnected habitat types used by transient fish species during their period of estuarine residency. Structural marsh management restricts habitat connectivity and impedes the movement of fishes among these habitat types by limiting access via water control structures (WCSs) between the managed area and the rest of the estuary. While some general information on fish passage rates is available, species-specific information on passage through WCSs is lacking for salt marsh fishes. We monitored tagged fishes from March 2012 through November 2013 using passive integrated transponder antenna arrays at two identical WCSs in the Calcasieu Lake estuary, Louisiana, USA, to assess the effect of slotted WCSs on fish behavior. A total of 420 individuals of 15 species was tagged and released at the WCSs; of these, 145 individuals representing 11 species were later detected at the WCSs. Five species comprised most (93%) of the detected individuals: Elops saurus (n = 60), Mugil cephalus (n = 43), Sciaenops ocellatus (n = 20), Pogonias cromis (n = 7), and Ariopsis felis (n = 5). Passage rates were low, with most of the observed fishes (n = 80) passing only once through the structures. Other than E. saurus, which was only observed migrating out of the managed marsh, no clear pattern in swimming direction was observed for the other species. Detected species were all present primarily during the summer and fall, however, diel activity at the structures varied by species. The WCSs in our study area appeared to attract and congregate fishes, functioning more like ecological hotspots, rather than simply facilitating fish passage.     

Mating calls of three prochilodontid fish species from Brazil

Passive acoustic monitoring (PAM) of fish sounds has been used as a means of detecting the presence and abundance of fishes. Prior to PAM, bioacoustical analyses of sounds are needed to characterize species-specific characteristics of calls. With hydrophones placed in outdoor ponds, we recorded the mating calls of three species of prochilodontid fishes (Prochilodus argenteus, P. costatus, P. lineatus). Fish were induced to spawn and call by injection of carp (Cyprinus carpio) pituitary gland extract. We recorded a total of 394 pulse train calls and additional single pulse calls that were not associated with trains. The trains of all three species were similar in nature - series of low frequency pulses that lasted from 1 to 11 s, often with an initial rapid rise followed by a slow tapering of pulse amplitude. Dominant frequency of single pulses and trains was greatest in P. lineatus, with P. costatus and P. argenteus exhibiting lower single pulse dominant frequencies, and P. costatus having lower train dominant frequency. With data from the three species combined, the dominant frequency of pulses significantly increased with fish standard length. There was also a significant linear relationship between the dominant frequency of pulses and trains. Discriminant function analysis showed that differences in train dominant frequency, pulse duration, and pulse period between the three species were significant enough to discriminate between them. This study was the first to fully characterize the sounds of these three Prochilodus species, and should assist fisheries biologists monitoring spawning behavior in these species.     

Fine-scale genetic structure of rabbitfish, <Emphasis Type="Italic">Siganus fuscescens</Emphasis>, in Penghu Archipelago following a mass mortality event caused by extreme cold winter weather

In the winter of 2007–2008, a large number of fish were killed by chilling damage that occurred in the Pescadores (Penghu Archipelago). Such extreme weather events can cause rapid population changes, which provide an opportunity to understand the possible restoration mechanism of coral reef fishes in the Pescadores. The fine-scale genetic structure of the rabbitfish, Siganus fuscescens (Siganidae), was assessed using amplified fragment length polymorphism analysis. Significant genetic differences (lower gene flow) were observed between rabbitfish from the northern and southern parts of the Pescadores (Chenkong-Soukang, Φ _ST 0.075, P?<?0.001) but not between those from the northern Pescadores and northeastern Taiwan (Chenkong-Keelung, Φ _ST 0.03, P?>?0.02). The northern Pescadores and northeastern Taiwan have been shown to be relatively connected. The population structure of rabbitfish has complemented and helped support fish population recovery after several chilling events in the Pescadores.     

Changes in Immunity,Expression of some Immune-Related Genes of Shabot Fish, <Emphasis Type="Italic">Tor grypus</Emphasis>, Following Experimental Infection with <Emphasis Type="Italic">Aeromonas hydrophila</Emphasis>: Effects of Autochthonous Probiotics

In this study, the effects of orally administrated two native probiotics (Lactobacillus plantarum and Lactobacillus delbrueckii ssp. bulguricus), isolated from the intestine of Shabot fish, Tor grypus, on some immune response parameters and immune-related genes expression against Aeromonas hydrophila in T. grypus were evaluated. Four hundred and eighty juveniles weighing 45?±?10 g were randomly divided into four groups (with three replications) and fed with the experimental diet containing 5?×?10⁷ cfu g^?1 of L. plantarum (G1), Lactobacillus bulgaricus (G2), Lactobacillus casei (G3), and a control diet (without probiotics) for 60 continuous days. At the end of the dietary treatments, fish were challenged with a lethal concentration of A. hydrophila (5?×?10⁸ CFU ml^?1) via intra peritoneal (i.p) injection. Blood and head kidney samples were taken from six fish in each treatment before challenging and 6, 12, 24, and 48 h and also 7 days after injection. The results showed that lysozyme, complement, bactericidal, and NBT activity of probiotic-treated groups were significantly elevated (P?<?0.05). The IL-8, IL-1β, and TNF-α gene expressions were significantly higher in all probiotic-treated groups (P?<?0.05). Meanwhile, a high direct correlation was observed between serum immune parameters and expression of immune-related genes (P?<?0.0001); furthermore, the highest correlation (R ²?=?0.634, P?<?0.0001) was recorded between IL-1β expression and NBT activity. It can be concluded that not only two native probiotics strains stimulate serum immune responses parameters and immune-related gene expression in T. grypus, but also a high correlation was seen among these indices. The study suggests that gastrointestinal colonization is preferred for host specificity as the strain previously derived from shabot fish displayed better colonization than the non-indigenous bacteria strain such as L. casei. Therefore, these native probiotics bacteria can be accounted as suitable candidates to immune stimulation in fish.     

Distribution and abundance of fish in the southwest of Caspian Sea coastal waters

This study was carried out in southwestern Caspian Sea coastal area to elucidate demersal bony fishes distribution and abundance. Twenty two species were found in shore line, which belong to 6 families. In deeper waters down to 7 meters only 5 species of Gobiidae and 1 species of Syngnathidae were identified. Two species Neogobius caspius and N. pallasi were the main components of demersal fishes; however in some regions Rutilus caspicus, Rutilus kutum and Liza spp. were dominated. Most places were dominantly occupied by Atherina boyeri, which had the highest abundance among the pelagic fishes. Conversely, the Ponticola gorlap, N. melanostomus and Proterorhinus nasalis showed the lowest abundances (less than 1 ind./100 m²). Benthophilus stellatus and P. nasali had the lowest niche overlaps with other species. Both of these two species and P. gorlap are suggested to be classified as endangered or vulnerable species based on their low abundance. The distribution of Syngnathus abaster depends on algae, while algae grow up into the stony construction of the coastal line. A negative insignificant correlation was observed between pelagic and demersal fish abundances. The commercial fisheries data of 76 beach seines in our study area during 2002–2013 was compared with our results on fish abundance and species composition. More than 93% of total fish catch constituted Liza spp. and Rutilus kutum. The relationship between the abundance and distribution of the studied species, and the restocking activities performed by Iranian fisheries organization are discussed. The high abundance and distribution of small size fish in tidal zone could be related to the distribution of crustacean, which provide a good source of food for these fish species.     

DNA barcoding of fishes in Irtysh River China

DNA barcoding was a molecular diagnostic method that provided rapid and accurate species identification. The 650 bp-length cytochrome c oxidase subunit I (COI) gene of 33 species in Irtysh River China was sequenced and analyzed in this study. The average intra-species, -genus, -family, and -order of Kimura two parameter (K2P) distances were 0.003, 0.060, 0.163 and 0.240, respectively. The genetic distance between genus Barbatula and Cobitis was the largest whereas that between genus Hypophthalmichthys and Aristichthys was the smallest. The neighbour-joining tree constructed by all 44 haplotypes was divided into two major clusters: Cypriniformes fishes and other fishes. A cryptic species of Barbatula barbatula was detected according to 2% genetic threshold.     

Slow-progressing photoreceptor cell degeneration in <Emphasis Type="Italic">night blindness c</Emphasis> mutant zebrafish

We describe here the morphological and functional alterations of the retina of mutant zebrafish, night blindness c (nbc). The nbc mutant was isolated from the F1 generation of N-ethyl-N-nitrosourea mutagenized founders. Visual sensitivity of wildtype and heterozygous (nbc^+/?) mutant fish was determined using a behavioral assay based on visually mediated escape responses. Histology, immunocytochemistry, and electroretinography were used to study structural and functional changes of the outer retina. The behavioral visual response of nbc^+/? mutants started to deteriorate at 12 months of age. Considerable variations existed between the extents of retinal degeneration of individual fish. In the most severe cases, both rod and cone outer segments were degenerated. In moderate cases, only rod outer segments were affected. Yet in other cases, no degeneration was detected. The retina of homozygous (nbc^?/?) larvae had a normal appearance. However, they develop abnormally and died before 9 days post fertilization. In conclusion, nbc causes late-onset and progressive dominant retinal degeneration of both rod and cone photoreceptor cells. However, nbc is not a retina-specific gene, as the homozygous fish displayed extra-retinal defects.     

A re-evaluation of diversity of the Aporocotylidae Odhner, 1912 in <Emphasis Type="Italic">Siganus fuscescens</Emphasis> (Houttuyn) (Perciformes: Siganidae) and associated species

The aporocotylid fauna of the mottled spinefoot, Siganus fuscescens (Houttuyn), from Moreton Bay, Queensland, Australia, was characterised using a combined morphological and molecular approach. Four aporocotylid species were identified, three belonging to the genus Ankistromeces Nolan & Cribb, 2006 and one to Cardicola Short, 1953. Specimens of Cardicola matched an undescribed species from the same host and locality; this species is described as Cardicola mogilae n. sp. Phylogenetic analyses of ITS2 and 28S data showed that C. mogilae n. sp. forms a strongly supported clade with other Cardicola species from siganid fishes. We record Ankistromeces olsoni Nolan & Cribb, 2006 in Moreton Bay for the first time, redescribe A. dunwichensis Nolan & Cribb, 2006 on the basis of new specimens and sequence data and re-report Ankistromeces sp. X from Moreton Bay based on molecular data. We review the status of the ten putative species of aporocotylids reported from siganids. Small variation in ITS2 rDNA sequences, in association with different geographic localities, was previously used to separate Cardicola lafii Nolan & Cribb, 2006 from C. parilus Nolan & Cribb, 2006, C. bartolii Nolan & Cribb, 2006 from C. watsonensis Nolan & Cribb, 2006, C. tantabiddii Nolan & Cribb, 2006 from Cardicola sp. 2, Ankistromeces sp. Y from A. olsoni and Ankistromeces sp. X from Ankistromeces sp. Z. These five combinations are reinterpreted as each representing a single species; Cardicola lafii is recognised as the senior synonym of C. parilus and C. bartolii as the senior synonym of C. watsonensis. This study thus suggests that six, rather than ten, species should be recognised as infecting S. fuscescens. This richness remains greater than is known for any other fish species and siganids are, so far, unique among fishes in harbouring two strongly radiated lineages of aporocotylids.     

Medaka villin 1-like protein (VILL) is associated with the formation of microvilli induced by decreasing salinities in the absorptive ionocytes

Introduction

Villin 1 is an actin-regulatory protein involved in the formation of microvilli of mammalian enterocytes. The microvilli, finger-like protrusions, are more abundant on the apical surfaces of gill ionocytes in various freshwater (FW) teleosts than in seawater (SW) fishes. However, the plasticity in the mechanisms of microvillus formation in the gill ionocytes are poorly understood, and the actin-regulatory proteins involved in the formation of microvilli have not been identified in fishes. The present study used the euryhaline medaka (Oryzias dancena) as a model to explore the role of a homolog of villin 1 in the actin-organization of cellular morphologies induced by decreasing salinities.

Results

By ultrastructural observation, there are numerous actin filaments organized on the apical cortex of ion-absorptive ionocytes in the FW-acclimated medaka. From gills of the euryhaline medaka, we have identified the VILL sequence. The phylogenetic tree and functional domains suggest that VILL is the homolog of villin 1 in fishes. Immunofluorescence using a specific antibody revealed that VILL was specifically localized to the apical region of gill ionocytes along with microvilli in the FW medaka, but not in SW fish. The expression levels of Odvill mRNA and VILL protein were higher in the gills of the FW individuals than in the SW group and were induced when fish were transferred from SW to FW. A morpholino oligonucleotide for VILL knockdown eliminated the apical protrusions of ionocytes and pavement cells in the trunk epithelia of embryos.

Conclusions

From a novel aspect of cytoskeletal functions, our findings highlighted the important role of VILL protein in the ionoregulation of aquatic vertebrates in response to different osmotic challenges. This study is the first to show that the expression of VILL is associated with the formation of microvilli in the absorptive ionocytes of a euryhaline fish. Loss-of-function experiments showed that the distribution of VILL may represent the molecular link between the cytoskeletal organization and cellular morphology of the absorptive ionocytes during hypoosmotic adaptation in aquatic vertebrates.     

<Emphasis Type="Italic">Acinetobacter pittii</Emphasis>, an emerging new multi-drug resistant fish pathogen isolated from diseased blunt snout bream (<Emphasis Type="Italic">Megalobrama amblycephala</Emphasis> Yih) in China

Despite the reason that genus Acinetobacter works as a grave human pathogen, very few numbers of researches have been done so that term it as a pathogen in respect to fish. As per the current study, isolation of three pathogenic bacterial strains was carried out from infected blunt snout bream (Megalobrama amblycephala Yih), from a farm in Yixing city, Jiangsu province, China, which displayed symptoms like tail-rot, shedding scales and ascites in addition to gentle ulceration on the entire body regardless of size and sex of fish. Taking into account the bases of morphology, varied biochemical tests, 16S rDNA segment and rpoB gene sequence analysis, in addition to phylogenetic study, the pathogenic bacteria was identified as A. pittii. Recursive infectivity experiment validated their pathogenicity. Pathological modifications of blunt snout bream infected with A. pittii were taken into observation. Confirmation of the pathogenicity was additionally made by infectivity studies of zebra fish (Brachydanio rerio) and nematode (Caenorhabditis elegans). The drug resistance of these isolates was also scrutinized. All isolates, recognized as multiple drug resistant strains, showcased resistance to clindamycin, streptomycin, vancomycin, cephalosporins, ampicillin, piperacillin, and trimethoprim-sulfamethoxazole, while showcasing sensitivity to norfloxacin, gentamicin, amikacin, and imipenem. Multi-locus sequence typing of these A. pittii isolates brought to light a new clonal lineage of Acinetobacter leading to fish septicemia outbreaks together with indicating that Acinetobacter stains with the new sequence type 839 may be the dominant clone. This is the first report dealing with the infection caused by A. pittii in fish that suggests that A. pittii has a prospective threat to be encountered by freshwater fish farming in addition to causing human clinical infections.     

Fish length-weight relationships in the Weddell Sea and Bransfield Strait

Length-weight relationships are provided for 49 Antarctic fishes from 9 families. The fish were from three research cruises of 1996, 1998 and 2000 to the Weddell Sea and Antarctic Peninsula. Samples were collected by benthopelagic net, Agassiz trawl and bottom trawl at depths of 200–2,300 m. The exponent b in the length-weight relationship W=aL ^b ranged from 2.53 to 4.05. With a mean of 3.33, 50% of the values ranged between 3.157 and 3.480. In 31 species, the parameters were determined for each sex. For 64.5% of species, b was higher in females than in males. Exceptions were the Channichthyidae where b for six species was higher for males.     

A new primer set for amplification of the cytochrome <Emphasis Type="Italic">b</Emphasis> gene in lantern fishes (Myctophidae)

New universal primers are offered for amplification of complete sequence of mitochondrial cyt b gene in lantern fishes of the family Myctophidae. Analysis of cyt b variability in the species of seven genera (Bolinichthys, Ceratoscopelus, Diaphus, Diogenichthys, Lampanyctus, Lepidophanes, Nannobrachium) demonstrates considerable divergence between species: an average of 18.2% (p-distances). Diversity (nucleotide diversity, number of segregating and phylogenetically informative sites, average number of nucleotide differences) and divergence significantly exceed those of another widely used mitochondrial marker, a fragment of cytochrome c oxidase subunit 1 sequence (cox 1). The mitochondrial cyt b gene amplified with the developed primers can be recommended as an informative tool for phylogenetic and population studies of lantern fishes.     

Organic matter sources for fish larvae and juveniles in a marine-estuarine interface (Mar Chiquita lagoon,Argentina)

The aim of this study was to analyze the organic matter (OM) origin in the nearshore and the surf zones adjacent to Mar Chiquita lagoon, in order to determine the importance of allochthonous estuarine detritus and in situ marine phytoplankton as carbon (C) sources for young fishes prior to entering the lagoon. Water samples from both the nearshore and the surf zones were collected for estimation of Chlorophyll a concentration, and δ¹³C and δ¹⁵N values of the particulate organic matter (POM). Isotopic composition of the zooplankton and fish larvae from both zones and fish juveniles from the surf zone were also estimated. The contribution of potential OM sources was quantified by Bayesian stable isotope mixing models (SIAR). SIAR models revealed that the POM composition in the coastal area close to Mar Chiquita lagoon comprised a mix of primary producers (terrestrial and marine). The cordgrass Spartina densiflora that develops in the saltmarshes bounding the lagoon, contributed most to the POM of the surf zone, being important as a C source for zooplankton from the same zone. Towards deeper waters (10–12 m, ~2.5 km offshore) with higher chlorophyll a concentrations, phytoplankton contributed most to the POM. Spartina densiflora was not relevant as a C source for larval and juvenile fishes. However, it was of importance to the group of primary consumers, which apparently sustain other zooplankton organisms that fish fed on. In this sense, the OM derived from S. densiflora and exported to the coastal area contributes to sustaining the prey for young fishes outside Mar Chiquita.     

An annotated list and molecular data on larvae of gryporhynchid tapeworms (Cestoda: Cyclophyllidea) from freshwater fishes in Africa

An annotated list of larvae (metacestodes) of gryporhynchid tapeworms (Cestoda: Cyclophyllidea) from freshwater fishes in Africa is provided with numerous new host and geographical records. Newly collected materials from Burundi, Democratic Republic of the Congo, Kenya, Madagascar, Namibia, Senegal, South Africa, Sudan and Zimbabwe practically double the total number of species reported from African fish so far. We confirm the occurrence of 16 species (five unidentified to the species level and most likely representing new taxa) belonging to the genera Amirthalingamia Bray, 1974 (1 species), Cyclustera Fuhrmann, 1901 (2 species), Dendrouterina Fuhrmann, 1912 (1 species), Neogryporhynchus Baer & Bona, 1960 (1 species), Paradilepis Hsü, 1935 (4 species), Parvitaenia Burt, 1940 (5 species), and Valipora Linton, 1927 (2 species). Additionally, metacestodes of four unidentified species of Paradilepis and Parvitaenia are reported from fish for the first time. Rostellar hooks of all species are illustrated and their measurements are provided together with a host-parasite list. The molecular phylogenetic analysis based on partial LSU rDNA sequences offers the first insight into the internal phylogenetic relationships within the family. Together with the morphological observations, the present study provides a taxonomic baseline for future studies on this largely neglected, but widely distributed and relatively frequent, group of parasites of African fishes, including economically important cichlids like tilapias and cyprinids.