Ria de Alvor as a spawning place and a nursery ground

Ria de Alvor is a small estuary between Lagos and Portimão on the south coast of Portugal, 37°7'–37°10'N, 8°35'–8°38'W.
Samples were collected monthly in the period April 1985–March 1986 in an ichthyoplankton and ichthyofauna survey of the estuary. A WP-2 plankton net was used for catching ichthyoplankton, and a beam trawl and a beach seine were used for catching ichthyofauna.
Scaldfish, Arnoglossus laterna (Walbaum, 1792), even though the most abundant species in ichthyoplankton samples, was never found in ichthyofauna samples.
From the results obtained, it is concluded that a great part of the fish species are temporary marine visitors using the Ria as a nursery ground, although this system appears to provide a spawning area for species with benthic eggs. No evidence was found of pelagic spawning.     

Irradiation of cells in tissue culture

Summary The susceptibility of giant cells which had been induced by 1000 to 4000 r of gamma irradiation from a Cobalt⁶⁰ source was studied in comparison to unirradiated cultures. Three human lines were utilized: a synovial cell (McCoy), an amnion (Fernandes) and a fetal lung (Nakanishi). In the amnion line a complete cytopathogenic effect was observed in the giant cells at the beginning of the third day after inoculation as compared to a similar effect produced on the fifth for the corresponding unirradiated control elements. A similar difference of two days was noted for the synovial cells. The virus titers of the amnion line were similar while the synovial cells produced a difference of approximately one logarithm for the virus obtained from the giant elements. The peak for the viral titer was reached earlier with the use of the irradiated cells.After treatment with 2000 r of gamma irradiation, the fetal lung strain which had not been found susceptible to bluetongue virus showed a complete cytopathogenic effect four days following virus inoculation.Giant cells were observed with phase contrast microscopy and following staining in order to study the lesions caused by the virus. Time-lapse phase contrast cinematography was also employed in the study of the giant cell-virus system. No specific lesions were observed.This research was supported by funds provided under Contract AF 41(657)-198 with the School of Aviation Medicine, USAF, Randolph Air Force Base, Texas.Fellow of the Instituto de Alta Cultura and the Fundaçaõ Calouste Gulbenkian of Lisbon, Portugal. Permanent address: Laboratorio Nacional de Investigação Veterinária, Lisbon, Portugal.     

A fourteen-year overview of the fish assemblages and yield of the two oldest Algarve artificial reefs (southern Portugal)

Artificial reefs have been deployed worldwide for the last three decades in response to problems concerning coastal resources, ecosystems and fisheries. In many countries they have became important elements of integrated fisheries management plans. In Portugal two artificial reef systems (ARSs) were deployed by the Portuguese Institute of Marine Research (IPIMAR) in 1990, in the southern coast (Algarve). They were located off Faro and Olhão, over different sea-bottom types and located at different distances from the coastline. To analyse the effect of ARSs deployment on local fish assemblages and to evaluate their effectiveness in terms of mean fishing yields and mean number of species caught, fishing surveys have been conducted over 14 years (256 net sets) using a gillnet to sample the ARS of Faro and Olhão and respective control sites. The fishing yields from the ARs continually exceeded those from the control sites, in both the mean number of species caught and the mean CPUE in weight (1.8–2.6 times); both were higher at Faro. Moreover, the comparison between fish assemblages from the ARS and respective control sites showed that the deployment of the man-made structures did not change the composition of the fish assemblages caught by the gill nets, or the equilibrium of the community, since the relative proportion of the different functional groups of fish remained stable. The ARSs are a useful management tool on the Algarve coast, enhancing and diversifying the catches, thus contributing to improved local artisanal fisheries, which play a major role in this region.     

First records of urban invasive Cryptotermes brevis (Isoptera: Kalotermitidae) in continental Spain and Portugal

Occurrence of the West Indian drywood termite, Cryptotermes brevis, is registered for the first time as established populations in Barcelona (Spain) and also additional information is given regarding a recent record from Lisbon (Portugal). This serious invasive termite pest was detected in five buildings in Barcelona, Spain and one building in Lisbon, Portugal.     

The girl from the church of the sacrament: a case of congenital syphilis in XVIII century Lisbon

Syphilis is a sexually or congenitally transmitted infectious disease with an impact on the health of human populations that has undergone important cycles in different countries and periods of history. Its presence was first diagnosed in Europe in the late XIV century. In Portugal, although there are various written records of the infection in the last centuries, there are rare references to it in archeological findings (mummified bodies are also rare in Portugal). The current study describes a probable case of congenital syphilis in an 18-month-old girl buried in the Church of the Sacrament in Lisbon. Her body, dating to the XVIII century, was found mummified together with dozens of others, still not studied. Symmetrical periostitis of the long bones, osteitis, metaphyseal lesions, left knee articular, and epiphyseal destruction, and a rarefied lesion with a radiological appearance compatible with Wimberger's sign all point to a diagnosis of congenital syphilis. The diagnosis of this severe form of the infection, possibly related to the cause of death in this upper-class girl, calls attention to the disease's presence in XVIII century Lisbon and is consistent with the intense mobilization at the time in relation to the risks posed by so-called heredosyphilis. It is the first case of congenital syphilis in a child reported in archeological findings in Portugal, and can be correlated with other cases in skeletons of adults buried in cemeteries in Lisbon (in the XVI to XVIII centuries) and Coimbra (XIX century). Finally, this finding highlights the need to study the entire series of mummified bodies in the Church of the Sacrament in order to compare the paleopathological findings and existing historical documents on syphilis, so as to expand the paleoepidemiological knowledge of this infection in XVIII century Lisbon.     

Is surface orientation a determinant for colonisation patterns of vagile and sessile macrobenthos on artificial reefs?

In order to examine how substratum colonisation can affect community structure, a 1-year study was conducted at the Faro/Ancão artificial reef (Algarve, Portugal). In the study of hard substratum communities, motile species are usually neglected and only the conspicuous species are taken into account. Therefore, the development of vagile and sessile components of the epibiotic community were analysed separately. Differences between assemblages on horizontal surfaces, but not on vertical surfaces, were detected. Multivariate analysis detected differences in macrobenthic community structure either considering sessile or motile components. However, significant differences were only detected for vagile fauna. Moreover, this study suggests that for hard substratum communities, analysis of the vagile fauna is important and should be taken into account in the functioning of the artificial raft.     

Biochemical Engineering Science

Cover illustration Coast of the Portuguese Algarve, location of the 7^th European Symposium of Biochemical Engineering Science (ESBES) held last September in Faro, Portugal. This special issue of BTJ is edited by ESBES President Alois Jungbauer and highlights not only a meeting report but also 17 selected scientific contributions from international speakers at the conference. Topics include process analytical technology, bioprocessing and engineering, biocatalysis, system scale-up and much more.     

Glycerolysis of olive oil: batch operational stability of Candida rugosa lipase immobilized in hydrophilic polyurethane foams

The operational stability of the Candida rugosa lipase immobilized in a hydrophilic polyurethane foam was evaluated in consecutive batches for the glycerolysis of olive oil in n-hexane, aimed at the production of monoglycerides.Glycerol controlled the glycerolysis in the system under study, since it is both a substrate and a powerful water binder that reduces the water activity of the reaction medium and of the microenvironment. Two sets of experiments were carried out under different glycerol/triglyceride ratios. After 345 hours of consecutive 23 hours batches no lipase inactivation was observed.List of Symbols a_w thermodynamic activity of water - DG diglyceride (s) - FAME fatty acid methyl ester (s) - FFA free fatty acid (s) - FID flame ionization detector Gly glycerol - MG monoglyceride (s) - TG triglyceride (s) - TLC thin layer chromatography The authors are grateful to Profs. P. Adlercreutz, Technical University of Lund, Sweden, and J.M.S. Cabral, Instituto Superior Técnico, Lisbon, Portugal, for inspiring discussions and advice, to Prof. Helena Pereira, Instituto Superior de Agronomia (ISA), Lisbon, Portugal, for the use of GC equipment and to Mrs. Marlene Dionísio, ISA, for invaluable help with some of the experimental work.     

A Space of One’s Own: Barbosa du Bocage,the Foundation of the National Museum of Lisbon,and the Construction of a Career in Zoology (1851–1907)

This paper discusses the life and scientific work of José Vicente Barbosa du Bocage (1823–1907), a nineteenth-century Portuguese naturalist who carved a new place for zoological research in Portugal and built up a prestigious scientific career by securing appropriate physical and institutional spaces to the discipline. Although he was appointed professor of zoology at the Lisbon Polytechnic School, an institution mainly devoted to the preparatory training of military officers and engineers, he succeeded in creating the conditions that allowed him to develop consistent research in zoology at this institution. Taking advantage of the reconstruction and further improvement of the building of the Lisbon Polytechnic, following a violent fire in 1843, Bocage transferred a natural history museum formerly located at the Academy of Sciences of Lisbon to his institution, where he conquered a more prestigious place for zoology. Although successive governments were unwilling to meet Bocage’s ambitions for the Zoological Section of the newly created National Museum of Lisbon, the collaborators he found in different parts of the Portuguese continental territory and colonial empire supplied him the specimens he needed to make a career as a naturalist. Bocage ultimately became a renowned specialist in Southwestern African fauna thanks to José de Anchieta, his finest collaborator. Travels to foreign museums, and the establishment of links with the international community of zoologists, proved fundamental to build up Bocage’s national and international scientific reputation, as it will be exemplified by the discussion of his discovery of Hyalonema, a specimen with a controversial identity collected off the Portuguese coast.     

Characterization of nine microsatellite loci in the sea star Astropecten aranciacus and cross-species amplification for related taxa

So far, only few microsatellite markers have been developed and extensively tested for echinoderms. To study the population genetic structure of the sea star Astropecten aranciacus, we developed primers for nine polymorphic microsatellite loci and tested them on two populations from Faro in Portugal (N = 25) and from La Herradura in Spain (N = 20). Within populations, allele numbers varied from four to 20, while expected and observed heterozygosities ranged from 0.593 to 0.936 and from 0.222 to 0.900, respectively. Additional cross‐species amplifications were polymorphic at some loci, indicating their potential usefulness for related taxa.     

Exposure of red knots (Calidris canutus rufa) to select avian pathogens; Patagonia, Argentina

As part of the shorebird surveillance, Red Knots (Calidris canutus rufa) were sampled in two Patagonian sites in Argentina, Río Grande and San Antonio Oeste, during 2005-2006. Cloacal swabs and serum samples were collected from 156 birds and tested by virus isolation (Newcastle disease virus), polymerase chain reaction (PCR; avian influenza virus and Plasmodium/Hemoproteus), and for antibodies to St. Louis encephalitis virus. All test results were negative.     

Ecophysiology, growth timing and reproductive effort of three sexual foms of Corema album (Empetraceae)

Corema album is a dioecious shrub endemic of the Iberian Peninsula, growing in sandy coastal areas from the North of Galicia to Gibraltar in the South. Hermaphrodite individuals have been found in the southern populations of El Asperillo (Spain) and Vila Real de Santo Antonio (Portugal). In this paper, the role of hermaphroditic individuals in the driest populations of its biogeographical area is discussed and the trade-off between reproduction and vegetative growth in the three sexual forms is presented. Asperillo site where hermaphrodite individuals were more abundant was selected for this current study. The proportion of hermaphrodite individuals was 1–4%, and male/female sex ratio ranged from 0.9 to 1.1. Hermaphrodite plants had a low number of hermaphrodite inflorescences, in relation to the number of staminate inflorescences. Their ripe fruits were smaller than those of female plants. The reproductive effort was three times higher in female than in male or hermaphrodite plants. The observed interannual oscillation in vegetative elongation was not related to annual rainfall. However, differences existed in growth timing among the three sexual forms, related to the timing of peak investment in reproduction. These results suggest the existence of trade-offs between investment in reproduction and vegetative growth. There were significant differences in leaf water potential among the three sexual forms early in summer, with males showing the less negative and hermaphrodite the most negative potential values. The demand of water for fruit production may explain these differences. [Valdés B., Talavera S. and Fernández Galiano E. (eds), 1987. Flora Vascular de Andalucía Occidental, vol. 1. Ketres Editora, Barcelona.]     

Occurrence of Salmonella spp in estuarine and coastal waters of Portugal

The presence of Salmonella and its relationship with indicator organisms of fecal pollution, such as total coliforms, fecal coliforms and fecal streptococci, was studied at two marine zones in Portugal. Seventeen different Salmonella serotypes were isolated and identified, S. virchow was the most frequently isolated (21.6%). In addition, a high percentage (35.1%) was recorded for some Salmonella serotypes of clinical significance, namely S. enteritidis, S. infantis, S. typhimurium and S. virchow. In any of the samples from the two zones Salmonella was not detected in the absence of any of the indicator organisms. However, the incidence of Salmonella as a function of indicator concentration intervals established by the EEC standards was 0, 10 and 19.3% at guide values of total coliforms, fecal coliforms and fecal streptococci, respectively in the Faro samples (south of Portugal). In contrast, Salmonella incidence rates of 37.5, 36.4 and 33.3% were recorded at the corresponding guide values the Caminha samples (north of Portugal). No significant correlations (p>0.005) were obtained between Salmonella and the indicators at the sampling stations; however, total coliforms and fecal streptococci were the indicators most closely related to Salmonella in Caminha and Faro samples, respectively. Survival experiments in Escherichia coli, Enterococcus faecalis and S. typhimurium, using diffusion chambers, were performed to verify whether the lack of correlation between indicators and Salmonella was due to different inactivation rates in seawater. The results indicate that survival percentages of the three microorganisms tested were similar after 48 h of exposure to seawater.     

Brief communication: the collection of identified human skeletons housed at the Bocage Museum (National Museum of Natural History), Lisbon, Portugal

A large collection of identified human skeletons curated at the Bocage Museum (National Museum of Natural History, Lisbon, Portugal) has remained in relative anonymity since its collecting protocol was initiated in the 1980s. This collection originates from modern cemetery sources and is comprised of 1,692 skeletons with basic documentary data (age at death, place of birth, occupation, place of residence, and date and cause of death). At present, this information is more readily available for 699 individuals. The remaining 993 are in the process of being fully documented. The skeletons consist largely of Portuguese nationals who lived in the 19th and 20th centuries (1805-1975) in Lisbon. Both sexes are equally represented, and ages at death range from birth to 98 years, including 92 subadults (<20 years old).     

Palynoflores dans la coupe de l'Albien de Foz do Folcao (Portugal)

In the area of Lisbon (Portugal) near Foz do Folcao and along the sea-shore, the transgressive facies of the marly 0611 Albian may be seen sesting on the “Upper continental sandstones of Almargem”. On the basis of the variety and of the relative frequencies of reticulate pollen grains in particular, the following age assessment can be made. The topmost part of the “Upper sandstones of Almargem” as well as the lowermost transgressive facies, just underlaying the albian levels with associated faunas, are suggested to be middle Albian.     

Submarine Groundwater Discharge as a nitrogen source to the Ria Formosa studied with seepage meters

Submarine Groundwater Discharge (SGD) has been frequently ignored as a nutrient source to marine ecosystems because it is difficult to identify and quantify. However, recent studies show its ubiquity and ecological importance to the coastal zone, particularly when associated with contaminated continental aquifers. The Ria Formosa is a coastal lagoon located in the south of Portugal and surrounded by an intensely farmed area. Following a 12-month field study using seepage meters, we identified groundwater discharge in the intertidal zone of the lagoon. The seeping fluid was a mixture of two water types: one with low salinity and high nitrate concentration and another similar to local seawater. Based on the integration of monthly seepage rate measurements throughout the year, we estimate the mean discharge of submarine groundwater into the lagoon to be 3.6 m³ day⁻¹ per linear meter of coastline with freshwater contributions (per volume) ranging from 10% to 50%. The results of this study suggest a continental origin for the freshwater component, thus linking the biogeochemical cycles in the lagoon to anthropogenic activities taking place in the neighboring coastal plain. We further identify SGD as an important nutrient source to the Ria Formosa, estimating annual loads of 36.2 mol (0.507 kg) of Nitrogen, 1.1 mol (0.034 kg) of Phosphorus and 18.6 mol (0.522 kg) of Silicon per meter of coastline. Based on these results, we suggest that SGD is a potential contributor to the observed nutrification status of the Ria Formosa lagoon. All the authors were previously in Biogeochemistry Research Group, CIMA/IMAR (Centro de Investigacao Marinha e Ambiental/Instituto do Mar), Campus de Gambelas, 8000, Faro.     

Genetic analysis of two Portuguese populations of <Emphasis Type="Italic">Ruditapes decussatus</Emphasis> by RAPD profiling

The clam Ruditapes decussatus is commercially important in the south of Portugal. The random amplified polymorphic DNA (RAPD) technique was applied to assess the genetic diversity and population structure of two Portuguese populations occurring in the Ria Formosa (Faro) and the Ria de Alvor, respectively. Twenty-five individuals of each population were investigated by RAPD profiles. Genetic diversity within populations, measured by the percentage of polymorphic loci (%P), varied between 68.57% (Alvor) and 73.88% (Faro). Shannon’s information index (H) and Nei’s gene diversity (h) were 0.281 and 0.176, respectively, for the Alvor population and 0.356 and 0.234 for the Faro population. Overall, genetic variation within R. decussatus populations was high. The total genetic diversity (H _T) was explained by a low variation between populations (G _ST = 0.145), which is consistent with high gene flow (N _m = 2.9). The analysis of molecular variance (AMOVA) showed that 65% of variability is within populations and 35% between populations (Φ_PT = 0.345; P ≥ 0.001). The value of Nei’s genetic distance was 0.0881, showing a low degree of population genetic distance, despite the different geographic origin. This is the first study on the population genetics of R. decussatus by RAPD technique. The results may be useful for restocking programs and aquaculture.     

Brief communication: Sexual dimorphism of the juvenile basicranium

The purpose of this article is to examine the level of sexual dimorphism exhibited in the foramen magnum and occipital condyles of juveniles, and to test the utility of this sexual dimorphism for estimating sex. Using five basicranial measurements taken from 36 juveniles of known sex and age from the Lisbon documented collection (Portugal), we evaluated sexual dimorphism in the juvenile cranial base. Our application of a method previously applied solely to adults indicated that the basicranium is sexually dimorphic in juveniles, with larger foramen magnum and occipital condyle dimensions observed in males. Significant univariate differences between males and females were found for length and breadth of the foramen magnum, and breadth of the left occipital condyle. Using these measurements, multivariate discriminant analysis indicated that sex was correctly assigned 75.8% of time. Obtained accuracy, however, was lower than reported by previous studies of adult samples. We suggest that this discrepancy is a result of population variability rather than age. Am J Phys Anthropol 2010. © 2009 Wiley‐Liss, Inc.     

Population structure of seabass in Portugal: evidence from allozymes

Starch-gel electrophoresis was used to assess the level and distribution of genetic variation in juvenile European seabass sampled from five different nursery grounds along the coast of Portugal between November 1992 and February 1994. Thirty-eight loci were examined, of which six ( AAT-3*, ADA*, GPI-1*, GPI-2*, G3PDH-2*, SOD* ) were polymorphic at the 99% level and were used in population surveys. Low but statistically significant multilocus F _ST values suggest that population structuring exists along the Portuguese coast. There is some restriction in gene flow between the population at Faro and all other sites to the north.