Post Bleaching Assessment of Corals in Andaman and Nicobar Islands

Reefs of Andaman and Nicobar Islands harbour 418 species of scleractinian corals spread over an area of 2,000 km². In April to May, 2010, due to the delayed onset of the southwest monsoon the sea surface temperature of the coastal and oceanic region increased to 31.7 °C in respect to the earlier record of maximum 29.0 °C during the said period. This resulted in mass bleaching of hermatypic corals during May, 2010. Rapid under water surveys have been conducted in reefs of Andaman and Nicobar Islands to assess the health of corals between May 2010 and August 2011. It is estimated that 76.62 ± (SD) 10.83 % of coral species are bleached up to a water depth of 10–15 m. Species from the genus Acropora appeared more susceptible to bleaching than those belong to the genus Porites. During the month of June 2010 the sea surface temperature was reduced to 29 °C perhaps due to the rainfall which stimulated rebuilding of zooxanthellae population in bleached corals. Recovery of 85.54 ± (SD) 6.33 % of bleached corals was seen during the study period of 11 months after the bleaching event. Porites spp. showed a high recovery rate, while Acropora spp. had the highest mortality rate. Coral mortality can have profound ecological and socio-economical implications and highlights the need for sustained monitoring for coral reef conservation in India. Hence, steps must be taken to improve management tools to protect these resources of global significance.     

Diversity and antibacterial activities of culturable fungi associated with coral Porites pukoensis

The diversity of coral associated fungi is not enough understood, especially for scleractinian corals. Members of Porites are common and dominant species of scleractinian corals. To date, the fungal communities associated with coral Porites pukoensis have been not reported. In this paper, the diversity and activity of coral associated fungi in P. pukoensis were explored, 23 fungal strains were isolated, belonging to 10 genera and Aspergillus sp. (30.4 %) was predominant fungal genera. The sequence of isolate C1-23 in GenBank was only 90 % similarity to the most closely related sequences. It is concluded that rich fungal symbionts are attached to P. pukoensis, the rate of isolates with antibacterial activity was up to 30 %, particularly some isolates showed stronger bioactivities to gram-negative bacteria. It is included that the diversity of coral associated fungi in P. pukoensis is abundant and its activity is obviously. So the activities of fungi in P. pukoensis were deserved for further study.     

The effects of water flow and sedimentation on interactions between massive Porites and algal turf

Interactions between scleractinian corals and benthic algae can be an important process structuring reef communities, yet interaction dynamics are not fixed and may be influenced by abiotic factors such as sedimentation, a process often underlying reef degradation. However, rates of sedimentation and the effects of trapped sediments may be influenced by water flow. The first goal of this study was to quantify gradients in sedimentation and flow along fringing and back reefs of the north shore of Moorea, French Polynesia, and determine whether such gradients correlate with changes in the frequency and outcomes of massive Porites–algal turf interactions. On the back reef, the frequency of Porites–algal turf interactions and the competitive success of algal turfs increased significantly with decreasing flow. Sedimentation, however, was not a significant driver of the observed patterns. Along fringing reefs, in the absence of a flow gradient, it was the gradient in sedimentation that best explained spatial variation in Porites–algal turf interaction frequencies and the competitive success of algal turfs. The second goal was to quantify the separate and combined effects of flow and sedimentation on Porites–algal turf interactions in a laboratory setting. The combined effects of low flow and sedimentation significantly increased the area of Porites tissue damaged when in contact with algal turf, while high flow attenuated the negative effects of sedimentation. Together, these results implicate flow and sedimentation as important drivers of biological interactions between massive Porites and algal turf.     

Transplantation and immunoincompatibility reactions among reef-building corals

Intracolony or syngeneic transplants of pieces of living coral, either occurring naturally on reefs or produced experimentally, were consistently compatible. In contrast, intercolony allografts performed extensively inAcropora formosa and inPorites andrewsii were incompatible, as were allografts occurring naturally in additional species observed in reef communities. Diverse interspecific combinations of coral xenografts generally displayed greater incompatibilities. Four levels of immuno-reactivity, with manifestations ranging from mild to severe, were distinguishable as follows: a) contact avoidance reactions, b) allogeneic contact incompatibility, c) chronic xenogeneic incompatibility, and d) acute interspecific aggression.Allogeneic incompatibility, most studied inA. formosa, was characterized by soft tissue contact avoidance wherever possible; absence of tissue death despite extensive enforced contact (18–20 days); and late interfacial cementation terminating allogeneic soft tissue contact. The properties ofchronic xenogeneic incompatibility as found in diverse species combinations, are slow onset (>7 days), bidirectional or unidirectional killing in contact zones, and short-range or localized effectiveness.Acute interspecific aggression initiated byFungia fungites as a dominant “aggressor ” is distinguished by early occurrence (2–7 days) and unidirectional contact killing. The presence or absence of these acute xenogeneic reactions sharply discriminated between species within each of the generaAcropora, Pocillopora, andPorites. No hierarchy of aggressive interactions was evident at the generic level.     

Vermetid gastropods reduce foraging by herbivorous fishes on algae on coral reefs

Vermetid gastropods have the potential to reduce foraging by herbivorous fishes on algae on coral reefs because they produce mucous nets that cover the surfaces of coral skeletons, potentially inhibiting foraging by fishes. We assessed this possibility using both observational and experimental approaches in Moorea, French Polynesia. Foraging rates of herbivorous fishes (total number of bites by all species per minute) were recorded in plots that varied naturally in the cover of vermetid mucous nets. This study, done at six sites, revealed that foraging on algal turf declined with increasing cover of vermetid mucous nets, ranging from ~2 to 22 bites m^?2 min^?1 at 0 % coverage to 0–5 bites m^?2 min^?1 at 100 % coverage. The magnitude of this effect of vermetid nets varied among microhabitats (high, mid, and low bommies) and sites, presumably due to variation in the intensity of herbivory. Experimental removal of vermetid mucous nets from plots more than doubled the foraging intensity on turf algae relative to when vermetid nets were present at high (≥70 %) cover. Our results indicate that algal turf on coral reefs may benefit from associational refuge from grazing provided by vermetid gastropods, which might in turn harm corals via increased competition with algal turf.     

Quantification of virus-like particles suggests viral infection in corals affected by Porites tissue loss

Porites tissue loss is a common disease of Porites compressa on Hawaiian reefs. Despite its prevalence, to date, the aetiological agent of the disease has not been found. The apparent lack of a microbial causative agent in the similar disease Porites bleaching with tissue loss, as well as increasing evidence of viral infections in scleractinian corals and Symbiodinium, led us to hypothesise that a virus may be responsible. Electron microscopy revealed the presence of numerous and varied virus-like particles (VLPs) in healthy and diseased P. compressa colonies. While overall virus numbers were similar in all samples, the abundance of a group of icosahedral VLPs differed significantly between healthy and diseased colonies. While not conclusive, these results suggest that viruses may play a role in this disease, and provide a basis for further studies.     

Composition and ecology of deep-water coral associations

Between 1966 and 1978 SCUBA investigations were carried out in French Polynesia, the Red Sea, and the Caribbean, at depths down to 70 m. Although there are fewer coral species in the Caribbean, the abundance of Scleractinia in deep-water associations below 20 m almost equals that in the Indian and Pacific Oceans. The assemblages of corals living there are described and defined as deep-water coral associations. They are characterized by large, flattened growth forms. Only 6 to 7 % of the species occur exclusively below 20 m. More than 90 % of the corals recorded in deep waters also live in shallow regions. Depth-related illumination is not responsible for depth differentiations of coral associations, but very likely, a complex of mechanical factors, such as hydrodynamic conditions, substrate conditions, sedimentation etc. However, light intensity determines the general distribution of hermatypic Scleractinia in their bathymetric range as well as the platelike shape of coral colonies characteristic for deep water associations. Depending on mechanical factors,Leptoseris, Montipora, Porites andPachyseris dominate as characteristic genera in the Central Pacific Ocean,Podabacia, Leptoseris, Pachyseris andCoscinarea in the Red Sea,Agaricia andLeptoseris in the tropical western Atlantic Ocean.     

Genetic species delineation among branching Caribbean Porites corals

Coral species are difficult to discern because of their morphological plasticity, long generation times, and slow rates of mitochondrial DNA evolution. Among Caribbean representatives of the genus Porites are three named species (P. divaricata, P. furcata, and P. porites) with branching colony morphologies whose validity as genetically isolated species has been debated. We present sequence data from the mitochondrial control region, nuclear ITS, and nine single-copy nuclear loci for the Caribbean Porites and a related eastern Pacific species. mtDNA sequences were nearly invariant among the three branching species and their crustose sister P. branneri, and ITS sequences from these four were intermingled. An information theoretic analysis provided no support for upholding the three named Caribbean branching species. Both a clustering analysis and an analysis of molecular variance showed that sequence variation from the three branching forms is partitioned more by geography than by taxonomy. Multi-locus coalescent phylogenetic analysis provided a calibrated estimate for the nuclear DNA substitution rate (0.14 % Ma^?1) close to that for other corals. Because no generalities have emerged from genetic investigations of the validity of morphologically defined coral species, the use of single-copy nuclear data is likely to be important in testing problematic species designations.     

High CO2 detrimentally affects tissue regeneration of Red Sea corals

Ocean acidification (OA) from rising atmospheric carbon dioxide (CO₂) is threatening the future of coral reef ecosystems. Mounting experimental evidence suggests that OA negatively impacts fundamental life functions of scleractinian corals, including growth and sexual reproduction. Although regeneration is regarded as a chief life function in scleractinian corals and essential to maintain the colony’s integrity, the effect of OA on regeneration processes has not yet been investigated. To evaluate the effects of OA on regeneration, the common Indo-Pacific corals Porites sp., Favia favus, Acropora eurystoma, and Stylophora pistillata were inflicted with lesions (314–350 mm², depending on species) and incubated in different pCO₂: (1) ambient seawater (400 µatm, pH 8.1), (2) intermediate (1,800 µatm, pH 7.6), and (3) high (4,000 µatm, pH 7.3) for extended periods of time (60–120 d). While all coral species after 60 d had significantly higher tissue regeneration in ambient conditions as compared to the intermediate and high treatments, reduction in regeneration rate was more pronounced in the slow-growing massive Porites sp. and F. favus than the relatively fast-growing, branching S. pistillata and A. eurystoma. This coincided with reduced tissue biomass of Porites sp., F. favus, and A. eurystoma in higher pCO₂, but not in S. pistillata. Porites sp., F. favus, and S. pistillata also experienced a decrease in Symbiodinium density in higher pCO₂, while in A. eurystoma there was no change. We hypothesize that a lowered regenerative capacity under elevated pCO₂ may be related to resource trade-offs, energy cost of acid/base regulation, and/or decrease in total energy budget. This is the first study to demonstrate that elevated pCO₂ could have a compounding influence on coral regeneration following injury, potentially affecting the capacity of reef corals to recover following physical disturbance.     

Contrasting rates of coral recovery and reassembly in coral communities on the Great Barrier Reef

Changes in the relative abundances of coral taxa during recovery from disturbance may cause shifts in essential ecological processes on coral reefs. Coral cover can return to pre-disturbance levels (coral recovery) without the assemblage returning to its previous composition (i.e., without reassembly). The processes underlying such changes are not well understood due to a scarcity of long-term studies with sufficient taxonomic resolution. We assessed the trajectories and time frames for coral recovery and reassembly of coral communities following disturbances, using modeled trajectories based on data from a broad spatial and temporal monitoring program. We studied coral communities at six reefs that suffered substantial coral loss and subsequently regained at least 50 % of their pre-disturbance coral cover. Five of the six communities regained their coral cover and the rates were remarkably consistent, taking 7–10 years. Four of the six communities reassembled to their pre-disturbance composition in 8–13 years. The coral communities at three of the reefs both regained coral cover and reassembled ten years. The trajectories of two communities suggested that they were unlikely to reassemble and the remaining community did not regain pre-disturbance coral cover. The communities that regained coral cover and reassembled had high relative abundance of tabulate Acropora spp. Coral communities of this composition appear likely to persist in a regime of pulse disturbances at intervals of ten years or more. Communities that failed to either regain coral cover or reassemble were in near-shore locations and had high relative abundance of Porites spp. and soft corals. Under current disturbance regimes, these communities are unlikely to re-establish their pre-disturbance community composition.     

Feeding behavior and diet of the eight-banded butterflyfish Chaetodon octofasciatus in the Thousand Islands,Indonesia

Marine fishes reach their highest diversity in coral reef ecosystems, which they utilize as territory, place of refuge and reproduction, and source of food. One type of predation among reef fishes is feeding on coral polyps, and a single, easily identifiable family of fishes, Chaetodontidae, contains the majority of obligate corallivore species. Multiple studies have examined the behaviour and ecology of Chaetodontidae and their relationship with the benthic habitat. However, many questions remain about their feeding ecology and food specifity at the species level. The present study is the first attempt to systematically decipher the feeding behavior of the obligate corallivore, Chaetodon octofasciatus. Field data were collected from four sites in the Thousand Islands, Indonesia, during two sampling campaigns in 2006, covering two seasons and two different depths. A high abundance of C. octofasciatus was positively related to hard coral cover. Out of a total of 57 scleractinian coral genera observed during the study period, 24 were utilized by C. octofasciatus. All fish collected during the study (n?=?36) had >86 % nematocysts in their guts, supporting their classification as obligate corallivores. Based on the Strauss electivity index, C. octofasciatus displayed a preference for the coral genus Acropora at all depths, while preference for Fungia became more marked at greater depth. Both Acropora and Fungia were observed at high density at all sites, with Acropora density decreasing markedly with depth and Fungia density increasing. Bite rates showed an asymptotic relationship to Acropora density, levelling off between 15 and 20 bites/5 min. The existence of a strong relationship with live coral cover and the preference for specific genera such as Acropora designate C. octofasciatus as a potential bioindicator in the Thousand Islands reefs, while making it particular susceptible to the ongoing degradation of reefs in the region.     

Stability of a coral reef fish community following a catastrophic storm

In January 1980, a severe 3 day storm struck the normally protected leeward coral reefs of Kona, Hawaii. Waves generated by the storm, which was estimated to be a once in 20–40 year occurrence, were in excess of 6 m and caused extensive reef destruction and shoreline alteration. Shallow nearshore areas were denuded of most bottom cover and marine life. Damage to corals was extensive with broken colonies of the coral Porites compressa occurring down to depths of 27 m. Pronounced algal blooms occurred in a clearly defined sequence subsequent to the storm. The patterns of both coral destruction and algal succession were similar to those described on other storm damaged reefs. Fish mortality directly attributable to the storm was slight and the few dead fishes noted were either surge zone or tide pool species. After the storm the shallow reef flat was devoid of resident fishes while deeper areas contained many fishes which had moved from shallower water. This habitat shift substantially reduced the immediate impact of the storm on the fish community. Despite considerable habitat destruction that resulted from the storm, there were no decreases in species or population abundances on five 25 m² quadrats monitored for 23 months before and 16 months after the storm. Similarly, the numbers of triggerfish sheltering within an area increased even though the storm reduced the number of available shelter holes. The shelter and space-related carrying capacity of these areas prior to the storm may therefore not have been reached. Recolonization of evacuated areas by fishes began shortly after the storm and within 16 months many areas had regained their prestorm appearances. Large numbers of individuals remained however, in their shifted locations.     

Negative indirect effects of neighbors on imperiled scleractinian corals

Predation pressure on an individual may be influenced by spatial associations with other organisms. In the case of rare and imperiled species, such indirect interactions may affect the persistence and recovery of local populations. This study examined the effects of coral neighborhood composition on the foraging behavior and impact of the corallivorous gastropod, Coralliophila abbreviata. We conducted a manipulative field experiment in which focal colonies of the threatened scleractinian coral Acropora cervicornis had no neighbors, conspecific neighbors, alternative prey (Orbicella faveolata) neighbors, or non-prey (Porites asteroides) neighbors. Individually tagged C. abbreviata were then seeded into the study area and allowed to colonize the experimental plots. Initial colonization was significantly affected by the species of neighboring corals and snail abundance after colonization was negatively correlated with focal colony growth. Snails exhibited a strong prey preference for A. cervicornis over O. faveolata and responded numerically to neighborhood quality (i.e., relative preference for neighboring corals). Thus, conspecific neighbors had the greatest predator-mediated negative effect on focal colony performance followed by O. faveolata neighbors. The results suggest that C. abbreviata mediate apparent competition between O. faveolata and A. cervicornis as both species contributed to the local abundance of their shared predator. Additionally, home range estimates for tagged C. abbreviata were calculated, compared among sexes, and found to be significantly greater for males than for females. Overall, this study sheds light on the foraging behavior of an important coral predator and highlights the potential importance of consumer-mediated indirect interactions in the dynamics of severely reduced populations. The results also have direct implications for conservation and population enhancement efforts.     

Distribution,food preference,and trophic position of the corallivorous fireworm Hermodice carunculata in a Caribbean coral reef

The fireworm Hermodice carunculata is a facultative corallivore on coral reefs. It can interact with algal overgrowth to cause coral mortality. However, because of its cryptic nature, little is known about its ecology. We used micropredator attracting devices (MADs) and stable isotope analyses to provide insights into the distribution and diet of H. carunculata in a coral reef on Curaçao, southern Caribbean. MADs consisted of algal clumps inside accessible mesh nets which H. carunculata could use as refuge. To obtain indications on its distribution pattern, MADs filled with Halimeda opuntia were deployed in different reef habitats ranging from 0 to 16 m water depth. Fireworms were found inside MADs in all reef habitats, indicating that they have a widespread horizontal and vertical distribution, ranging from the shoreline to the deeper reef slope. On the reef crest, MADs were filled using different algal species and deployed on dead or live scleractinian corals. MADs hosted more fireworms when placed on live corals, regardless of algal species used, suggesting that algal-induced corallivory may be widespread. To test for food preferences, different food sources were added inside the MADs. Fireworms detected potential prey within 6 h and were significantly more attracted by decaying corals and raw fish than by live corals, hydrozoans, or gorgonians. Stable isotope analyses indicated detritus, macroalgae, and scleractinian corals as potential food sources and revealed an ontogenetic dietary shift toward enriched δ ¹³C and δ ¹⁵N values with increasing fireworm size, suggesting that large-sized individuals feed on food sources of higher trophic levels. Our findings highlight H. carunculata as a widespread, and omnivorous scavenger that has the potential to switch feeding toward weakened or stressed corals, thereby likely acting as a harmful corallivore on degraded reefs.     

Effects of predation on diel activity and habitat use of the coral-reef shrimp Cinetorhynchus hendersoni (Rhynchocinetidae)

Nonlethal effects of predators on prey behaviour are still poorly understood, although they may have cascading effects through food webs. Underwater observations and experiments were conducted on a shallow fringing coral reef in Malaysia to examine whether predation risks affect diel activity, habitat use, and survival of the rhynchocinetid shrimp Cinetorhynchus hendersoni. The study site was within a protected area where predatory fish were abundant. Visual surveys and tethering experiments were conducted in April–May 2010 to compare the abundance of shrimps and predatory fishes and the relative predation intensity on shrimps during day and night. Shrimps were not seen during the day but came out of refuges at night, when the risk of being eaten was reduced. Shrimp preferences for substrata of different complexities and types were examined at night when they could be seen on the reef; complex substrata were preferred, while simple substrata were avoided. Shrimps were abundant on high-complexity columnar–foliate Porites rus, but tended to make little use of branching Acropora spp. Subsequent tethering experiments, conducted during daytime in June 2013, compared the relative mortality of shrimps on simple (sand–rubble, massive Porites spp.) and complex (P. rus, branching Acropora spp.) substrata under different predation risk scenarios (i.e., different tether lengths and exposure durations). The mortality of shrimps with short tethers (high risk) was high on all substrata while, under low and intermediate predation risks (long tethers), shrimp mortality was reduced on complex corals relative to that on sand–rubble or massive Porites spp. Overall, mortality was lowest on P. rus. Our study indicates that predation risks constrain shrimp activity and habitat choice, forcing them to hide deep inside complex substrata during the day. Such behavioural responses to predation risks and their consequences for the trophic role of invertebrate mesoconsumers warrant further investigation, especially in areas where predatory fishes have been overexploited.     

Identification of nucleolus-localized PTEN and its function in regulating ribosome biogenesis

The tumor suppressor PTEN is a lipid phosphatase that is found mutated in different types of human cancers. PTEN suppresses cell proliferation by inhibiting the PI3K-Akt signaling pathway at the cell membrane. However, PTEN is also demonstrated to localize in the cell nucleus where it exhibits tumor suppressive activity via a different, unknown mechanism. In this study we report that PTEN also localizes to the nucleolus and that nucleolar PTEN plays an important role in regulating nucleolar homeostasis and maintaining nucleolar morphology. Overexpression of nuclear PTEN in PTEN null cells inhibits Akt phosphorylation and reduces cell size. Knockdown of PTEN in PTEN positive cells leads to nucleolar morphologic changes and an increase in the proportion of cells with a greater number of nucleoli. In addition, knockdown of PTEN in PTEN positive cells increased ribosome biogenesis. These findings expand current understanding of function and relevance of nuclear localized PTEN and provide a foundation for the development of novel therapies targeting PTEN.     

Common vitamin D pathway gene variants reveal contrasting effects on serum vitamin D levels in African Americans and European Americans

Vitamin D deficiency is more common among African Americans (AAs) than among European Americans (EAs), and epidemiologic evidence links vitamin D status to many health outcomes. Two genome-wide association studies (GWAS) in European populations identified vitamin D pathway gene single-nucleotide polymorphisms (SNPs) associated with serum vitamin D [25(OH)D] levels, but a few of these SNPs have been replicated in AAs. Here, we investigated the associations of 39 SNPs in vitamin D pathway genes, including 19 GWAS-identified SNPs, with serum 25(OH)D concentrations in 652 AAs and 405 EAs. Linear and logistic regression analyses were performed adjusting for relevant environmental and biological factors. The pattern of SNP associations was distinct between AAs and EAs. In AAs, six GWAS-identified SNPs in GC, CYP2R1, and DHCR7/NADSYN1 were replicated, while nine GWAS SNPs in GC and CYP2R1 were replicated in EAs. A CYP2R1 SNP, rs12794714, exhibited the strongest signal of association in AAs. In EAs, however, a different CYP2R1 SNP, rs1993116, was the most strongly associated. Our models, which take into account genetic and environmental variables, accounted for 20 and 28 % of the variance in serum vitamin D levels in AAs and EAs, respectively.     

The influence of repetitive thermal stresses on the dominance of reef-building Acropora spp. (Scleractinia) on coral reefs of the Maldive Islands

The distribution and size-age structure of Acropora corals were studied in two Maldivian atolls that differ in their geographic position and sea surface temperature regimes. The frequency and strength of thermal anomalies for the last 2 decades had a significant influence on the abundance, mortality rates, and age structures of acroporid communities. The long-term temperature amplitude was higher and the maxima were more pronounced in the northernmost Ihavandippolu Atoll than those in the equatorial South Huvadhoo Atoll. These differences resulted in a 10.4% mean cover of Acropora at Ihavandippolu Atoll, whereas the Acropora cover in the South Huvadhoo Atoll reached 59.5%. In the northern atoll, the coral mortality rate after the 2010 thermal anomaly was 3 times higher than that in the southern atoll. Younger acroporid colonies (up to 2 years old) dominated the northern atoll reefs, while the southern atoll showed a high proportion of older mature colonies. In both atolls, healthy table colonies of Acropora cytherea with a disk diameter greater than 2 m were observed that apparently survived three thermal anomalies since 1998. The mechanisms of acclimatization of Acropora and the prospects for its dominance in the Maldives under changing environmental conditions are discussed.