Two enzyme active transport in vitro with ph induced asymmetrical functional structures: I. The model and its analytical treatment

A class of systems is characterized by the asymmetrical distribution of a sink and a source reaction, the asymmetry of the global chemical equation (energy liberation) and by an asymmetrical one-wave space profile. These systems belong to the family of primary chemical cells and can deplete and enrich the media they separate. A “ one way ” transport-reaction chain is needed for specific “ real ” active transport. A two enzyme model of this class is described in which the spatial asymmetry is due to a (diffusive) pH gradient; this distribution of “ potential ” enzyme activities is called the “ functional structure ”. Equal potential enzyme activities and absence of reactive back action on local pH are assumed in the “ square model ” version of the pump. Analytical expressions of the enzymatic diffusion reactions are derived for zero and first order kinetics, i.e. in function of substrate concentrations. Tables of equations are presented. The intrinsic properties of the pump are characterized by (dimensionless) transport reaction parameters, (membrane composition); the “ potential ” activity is controlled by the pH gradient; the “ effective ” pumping is also a function of the substrate concentrations on the boundaries.     

Two enzyme active transport in vitro with ph induced asymmetrical functional structures: II. Properties of the pump and experimental illustrations

The theory and practice of the pump are illustrated. With graphs drawn using the analytical equations developed in Part I. the optimizing effect of reactive and diffusive parameters of the membrane or of pH gradients are discussed as a function of boundary conditions. Profile symmetries, extractive and accumulating powers, time constants and stereoselectivities are examined. An experimental glucose pump demonstrates the feasibility of the theoretical predictions. A mixture of hexokinase (optimal pH = 8.2) and phosphatase (optimal pH = 6.7) was immobilized in an agarose membrane. When asymmetry was induced by a pH gradient (between 6 and 9), ATP was consumed, D-glucose accumulated on one side and was separated from the L-isomer. Further generalizations and extensions are commented on.     

Contributions to the theory of active transport: III. The effect of drugs on active transport systems

The addition of a drug to a system which contains an active transport mechanism may produce a large number of effects on both the active transport mechanism and the permeability of the system. A general model of such a system is presented, and various possible results of the drug's addition are discussed. Methods of experimentally separating these effects on the active transport mechanism and the permeabilities of the system are then listed and analyzed.     

Molecular shuttles based on motor proteins: active transport in synthetic environments

Active transport in cells, utilizing molecular motors like kinesin and myosin, provides the inspiration for the integration of active transport into synthetic devices. Hybrid devices, employing motor proteins in a synthetic environment, are the first prototypes of molecular shuttles. Here the basic characteristics of motor proteins are discussed from an engineering point of view, and the experiments aimed at incorporating motor proteins, such as myosins and kinesins, into devices are reviewed. The key problems for the construction of a molecular shuttle are: guiding the direction of motion, controlling the speed, and loading and unloading of cargo. Various techniques, relying on surface topography and chemistry as well as flow fields and electric fields, have been developed to guide the movement of molecular shuttles on surfaces. The control of ATP concentration, acting as a fuel supply, can serve as a means to control the speed of movement. The loading process requires the coupling of cargo to the shuttle, ideally by a strong and specific link. Applications of molecular shuttles can be envisioned, e.g. in the field of nano-electro-mechanical systems (NEMS), where scaling laws favor active transport over fluid flow, and in the bottom-up assembly of novel materials.     

On the stochastic theory of compartments: III. General time-dependent reversible systems

General formulation of stochastic single- and multi-compartment reversible systems with time-dependent transitions is made. The correspondence between the stochastic mean and the deterministic value is established in case of time-dependence and it is shown how the consequence of this can be utilized to compute the distribution and the moments of each individual compartment of the system. A two-compartment reversible system previously proposed by Cardenas and Matis (1975a) is analyzed on the basis of the theory.     

Assembly in vitro of nuclei active in nuclear protein transport: ATP is required for nucleoplasmin accumulation.

DNA (from bacteriophage lambda or Xenopus) is assembled into nucleus-like structures when mixed with an extract from Xenopus eggs. Electron microscopy shows that these in vitro-reconstituted nuclei possess complete double membranes; some, but not all, nuclei have pore complexes. Extracts depleted of their endogenous ATP (by addition of ATPases) cannot assemble nuclear envelopes visible by phase-contrast microscopy. Once synthetic nuclei are assembled, however, they are stable when ATP is subsequently depleted, although their chromatin becomes condensed. About one-fourth of the nuclei assembled in vitro from lambda DNA accumulate nuclear proteins such as nucleoplasmin. ATP depletion blocks nucleoplasmin accumulation both in vitro, in pre-assembled synthetic nuclei, and in vivo, in the nucleus of microinjected oocytes. However, nucleoplasmin previously accumulated by reconstituted nuclei or by the germinal vesicle in microinjected oocytes is retained after ATP depletion.     

The sucrose carrier of the plant plasmalemma. III. Partial purification and reconstitution of active sucrose transport in liposomes.

The proteins from plasma membranes from sugar beet leaves were solubilized by 1% CHAPS and separated by size exclusion chromatography and by ion-exchange chromatography. The fractions enriched in sucrose transporter were monitored in three ways: differential labeling, ELISA, and reconstitution in proteoliposomes. When the plasma membranes were differentially labeled by N-ethylamaleimide in the presence of sucrose, a major peak of differential labeling was found at 120 kDa upon gel filtration. When this peak was recovered, denaturated by sodium dodecyl sulfate and reinjected on the gel filtration column, it yielded a peak of differential labeling at 42 kDa. When unlabeled membranes were used, the fractions eluted from the column were monitored by ELISA for their ability to recognize a serum directed against a 42 kDa previously identified as a putative sucrose carrier. The results paralleled those obtained by differential labeling, i.e. a major ELISA-reactive peak was found at 120 kDa upon gel filtration, and this peak yielded a peak most reactive at 40 kDa after denaturation. The 120 kDa peak prepared from unlabeled membranes was further separated on a Mono-Q column. The fractions were monitored by ELISA as described above, and reconstituted into proteoliposomes using asolectin. Active transport of sucrose, but not of valine could be observed with the reconstituted 120 kDa fraction. When the eluates from the Mono-Q column were reconstituted, the fractions exhibiting highest transport activity were enriched with a 42 kDa band. The data provide the first report concerning reconstitution of sucrose transport activity and confirm the involvement of a 42 kDa polypeptide in sucrose transport.     

Postradiation changes in the systems of active transport of ions in the CNS. Energy requirements for active transport

A study was made of the effect of irradiation with a superlethal dose of 9.288 C/kg on oxidative phosphorylation in morphologically and functionally different parts of the central nervous system. The CNS-syndrome was shown to develop against the background of a pronounced injury to energy processes in the brain. It is supposed that the impairment of the energy supply of active ion transport systems plays an important role in the dysfunction of the brain induced by high-level radiation.     

Atomic structures of periplasmic binding proteins and the high-affinity active transport systems in bacteria

We have determined and refined the X-ray crystal structures of six periplasmic binding proteins that serve as initial receptors for the osmotic-shock sensitive, active transport of L-arabinose, D-galactose/D-glucose, maltose, sulphate, leucine/isoleucine/valine and leucine. The tertiary structures and atomic interactions between proteins and ligands show common features that are important for understanding the function of the binding proteins. All six structures are ellipsoidal, consisting of two similar, globular domains. The ligand-binding site is located deep in the cleft between the two domains. Irrespective of the nature of the ligand (e.g. saccharide, sulphate dianion or leucine zwitterion), the specificities and affinities of the binding sites are achieved mainly through hydrogen-bonding interactions. Binding of ligands induces a large protein conformational change. Three different structures have been observed among the binding proteins: unliganded 'open cleft', liganded 'open cleft', and liganded 'closed cleft'. Here we discuss the functions of binding proteins in the light of numerous crystallographic and ligand-binding studies and propose a mechanism for the binding protein-dependent, high-affinity active transport.     

Rapid functional identification of putative genes based on the combined in vitro protein synthesis with mass spectrometry: a tool for functional genomics

For the rapid identification of functional activity of unknown genes from a sequence database, a new method based on in vitro protein synthesis combined with mass spectrometry was developed. To discriminate their subtle enzymatic activity, in vitro synthesized and one-step purified lipolytic enzymes, such as lip A and lip B from Bacillus subtilis and an unknown protein ybfF from Escherichia coli, were reacted with a mixture of triglycerides with different carbon chain lengths. Using direct matrix-assisted laser desorption/ionization mass spectrometry (MALDI-MS) analysis of reaction product, all three enzymes were revealed to have strong esterase activity rather than true lipase activity, which has no reactivity on long-chain fatty acids such as triolein. These results were also confirmed by classical color assay using p-nitrophenyl butyrate (pNPB) and p-nitrophenyl palmitate (pNPP) as representative lipolytic substrates.     

Taxonomic treatments of Camellia (Theaceae) species with secretory structures based on integrated leaf characters

Multivariate analysis of leaf shape, anatomy, and Fourier-transform infrared (FTIR) data of 27 Camellia species with secretory structures (sects. Archecamellia, Stereocarpus, Furfuracea, Chrysantha), together with three species from related genera, Gordonia and Tutcheria (Theacea), was conducted to clarify some taxonomic problems. Our results show that crystals occurring in adaxial epidermal cells are firstly observed in Chrysantha species, and the secretory structures described are in fact cork warts. Furthermore, we introduce a form coefficient (F _c) to assess the shape of epidermal cells, since they are usually irregular and difficult to describe. Pearson correlation analysis indicates that F _c is useful to assess epidermal cell shape. Principal component analysis (PCA) of leaf shape indicates that two species from section Archecamellia and two species from section Stereocarpus are significantly different from those in section Furfuracea. Cluster analysis of FTIR data visualizes the degree of affinity among the 30 species examined here, which is consistent with the cluster analysis (CA) of anatomical data, as illustrated in the dendrogram. Therefore, our study indicates that integrated leaf characters based on leaf shape, anatomy, and FTIR data are useful in the taxonomic treatment of Camellia species with secretory structures. Taxonomic controversies among the Camellia species with secretory structures could thus be successfully addressed using only a few intact or small portions of leaves. Moreover, our results tend to support that Chrysantha species should not be merged into section Archecamellia, and that section Heterogenea should not be recognized in taxonomic treatments of Camellia species with secretory structures.     

On the efficiency and reversibility of active ligand transport induced by alternating rectangular electric pulses.

The stationary-state kinetic properties of a simplified two-state electro-conformational coupling model (ECC) in the presence of alternating rectangular electric potential pulses are derived analytically. Analytic expressions for the transport flux, the rate of electric energy dissipation, and the efficiency of the transducing system are obtained as a function of the amplitude and frequency of the oscillation. These formulas clarify some fundamental concept of the ECC model and are directly applicable to the interpretation and design of experiments. Based on these formulas, the reversibility and the degree of coupling of the system can be studied quantitatively. It is found that the oscillation-induced free energy transduction is reversible and tight-coupled only when the amplitude of the oscillating electric field is infinitely large. In general, the coupling is not tight when the amplitude of the electric field is finite. Furthermore, depending on the kinetic parameters of the model, there may exist a "critical" electric field amplitude, below which free energy transduction is not reversible. That is, energy may be transduced from the electric to the chemical, but not from the chemical to the electric.     

The active ion transport properties of canine lingual epithelia in vitro. Implications for gustatory transduction

The electrophysiological properties of the dorsal and ventral canine lingual epithelium are studied in vitro. The dorsal epithelium contains a special ion transport system activated by mucosal solutions hyperosmotic in NaCl or LiCl. Hyperosmotic KCl is significantly less effective as an activator of this system. The lingual frenulum does not contain the transport system. In the dorsal surface it is characterized by a rapid increase in inward current and can be quantitated as a second component in the time course of either the open-circuit potential or short-circuit current when the mucosal solution is hyperosmotic in NaCl or LiCl. The increased inward current (hyperosmotic response) can be eliminated by amiloride (10(-4) M). The specific location of this transport system in the dorsal surface and the fact that it operates over the concentration range characteristic of mammalian salt taste suggests a possible link to gustatory transduction. This possibility is tested by recording neural responses in the rat to NaCl and KCl over a concentration range including the hyperosmotic. We demonstrate that amiloride specifically blocks the response to NaCl over the hyperosmotic range while affecting the KCl response significantly less. The results suggest that gustatory transduction for NaCl is mediated by Na entry into the taste cells via the same amiloride-sensitive pathway responsible for the hyperosmotic response in vitro. Further studies of the in vitro system give evidence for paracellular as well as transcellular current paths. The transmural current-voltage relations are linear under both symmetrical and asymmetrical conditions. After ouabain treatment under symmetrical conditions, the short-circuit current decays to zero. The increase in resistance, though significant, is small, which suggests a sizeable shunt pathway for current. Flux measurements show that sodium is absorbed under symmetrical conditions. Mucosal solutions hyperosmotic in various sugars also induce an amiloride-sensitive inward current. In summary, this work provides evidence that the sodium taste receptor is most probably a sodium transport system, specifically adapted to the dorsal surface of the tongue. The transport paradigm of gustation also suggests a simple model for electric taste and possible mechanisms for sweet taste.     

Nacl flux in the flounder (Pseudopleuronectes americanus) intestine: Effects of ph and transport inhibitors

• 1.1. The effects of extracellular pH on Na⁺ and Cl⁻ absorption were studied in vitro in the small intestine of the winter flounder, Pseudopleuronectes americanus.
• 2.2. Reductions in bathing solution pH inhibited J_ms^na (mucosal-to-serosal flux) and J_net^na (net flux) (r = 0.90) and J_net^Cl (r = 0.92) [due to an increase in J_sm^Cl, (serosal-to-mucosal)] and decreased short circuit current (Isc).
• 3.3. Luminal bumetanide (0.1 mM) and amiloride (1 mM) inhibited Na⁺ and Cl⁻ absorption by reducing J_ms.
• 4.4. Luminal barium (5mM) and luminal copper (100 μM) decreased J_ms^Cl and increased J_sm^Cl.
• 5.5. We conclude that reductions in extracellular pH inhibit a luminal membrane NaCl absorptive process (Na⁺-K⁺-2Cl⁻) and stimulate an electrogenic Cl⁻ secretory process.