Comparisons of benthic communities adjacent to riparian native eucalypt and introduced willow vegetation

1. Willows, Salix spp., have been widely introduced as a riparian species in temperate Australia and New Zealand. The present study was a broad-scale observational survey to document the differences between reaches of river lined with willows and native vegetation in the community structure of benthic invertebrates and the resources which these plants use.
2. Nine rivers in south-eastern Tasmania were examined on three occasions in autumn, spring and summer. Taxa were identified to family level, with the exception of Oligochaeta and Acarina, and benthic organic matter (CPOM and FPOM) and epilithic biomass were measured for each reach.
3. Taxon diversity and evenness were lower in willowed reaches in autumn, and total macroinvertebrate density and number of taxa were lowest in willowed reaches in summer. No differences in the fauna between willowed and native reaches were observed in spring. Measures of community similarity of the fauna in willowed and native reaches were significantly different in autumn and summer, but not in spring.
4. The taxa responsible for the significant differences seemed to be responding to differences in food availability and habitat quality in reaches of each vegetation type. Organic matter standing stock was higher in willowed reaches in autumn although the influence of these litter inputs on the fauna were not marked. Epilithon biomass was highest in autumn and spring in willowed reaches when shading in these reaches was least.
5.  The most marked differences between willowed and native reaches were during summer low flows, when the instream fauna appeared to be responding to changes to shading, water quality and the quality of the habitat.     

Some aspects of life strategies of Early Palaeozoic rugose corals

Examination of some well-preserved specimens of Silurian rugose corals from Gotland reveals that the following categories of life strategies can be distinguished: ambitopic, liberosessile, fixosessile, rhizosessile and possibly limited vagile. Most solitary rugose corals appear to have been liberosessile and are characterized by initial attachment to a small sediment grain but subsequently becoming recumbent on a soft substrate. Detailed studies of Phaulactis angelini, Holophragma calceoloides, Laccophyllum lindstroemi, Rhegmaphyllum conulus and Rhabdocyclus ocksaroensis n. sp., and comparison with earlier described species, provide some new aspects on different life strategies for solitary corals.     

Exergy作为生态学指标用于底栖动物群落恢复监测

Exergy作为热力学指标是指系统从给定状态到与其周围介质达到热力学平衡所需做的最大功,Exergy概念被生态学家借鉴应用于生态系统的研究,使它有了生物学的含义。应用Exergy作为生态指标,用于指示崇西潮滩湿地生态工程中受到干扰的大型底栖动物群落结构的复杂的恢复过程。用BACI（before versus after,control versus impact）方法进行底栖动物采样,根据（a）TV同食性类群的代码基因数;（b）储存在有机体基因内的信息;（c）种水平上的基因组尺度（C值）作为参数估算局域Exergy。结果显示工程区的Exergy值在工程干扰后9d时降到最低,接着工程区大型底栖动物群落的Exergy值逐渐与周围对照区趋向平衡。270d后,工程区的大型底栖动物群落得到恢复。3种不同方法估算的区域Exergy值表现出极为相似的动态趋势,进一步证实了用基因组尺度数据估算Exergy的可行性和优越性。研究表明Exergy指标不但适用于干扰后底栖动物群落恢复过程的监测,而且适合更广泛的生物系统研究。用周边对照区作为计算受干扰群落的局域Exergy值的动态参考比用历史资料更合适。     

Effects of pollution on benthic invertebrate communities of the St. Marys River, 1985

A survey was undertaken in 1985 to assess spatial and temporal trends in the benthic community structure in relation to sediment contamination and wastewater sources at 70 stations between Whitefish Bay and lower Lake George in the St. Marys River. Cluster analysis identified seven benthic communities. Three were identified as pollution impacted, based on a preponderance of tubificids and nematodes, usually at high densities (up to 259 000 m^-2), but sometimes at low densities (< 100 m^-2) at individual stations. Impacted communities occurred downstream of industrial and municipal sources and in depositional areas, and were confined mainly to Canadian waters. Unimpacted communities had greater numbers of taxa, and occurred upstream of point sources, along the U.S. shoreline, and in most areas of downstream lakes. Impacted and unimpacted communities were separated along particle size and contaminant gradients in river sediments. Despite recent reductions in pollutant loadings and improvements in sediment quality, no major changes were apparent in the status of the benthic community from earlier surveys.     

Development and validation of an experimental life support system for assessing the effects of global climate change and environmental contamination on estuarine and coastal marine benthic communities

An experimental life support system (ELSS) was constructed to study the interactive effects of multiple stressors on coastal and estuarine benthic communities, specifically perturbations driven by global climate change and anthropogenic environmental contamination. The ELSS allows researchers to control salinity, pH, temperature, ultraviolet radiation (UVR), tidal rhythms and exposure to selected contaminants. Unlike most microcosms previously described, our system enables true independent replication (including randomization). In addition to this, it can be assembled using commercially available materials and equipment, thereby facilitating the replication of identical experimental setups in different geographical locations. Here, we validate the reproducibility and environmental quality of the system by comparing chemical and biological parameters recorded in our ELSS with those prevalent in the natural environment. Water, sediment microbial community and ragworm (the polychaete Hediste diversicolor) samples were obtained from four microcosms after 57 days of operation. In general, average concentrations of dissolved inorganic nutrients (NO₃^?; NH₄⁺ and PO₄^?3) in the water column of the ELSS experimental control units were within the range of concentrations recorded in the natural environment. While some shifts in bacterial community composition were observed between in situ and ELSS sediment samples, the relative abundance of most metabolically active bacterial taxa appeared to be stable. In addition, ELSS operation did not significantly affect survival, oxidative stress and neurological biomarkers of the model organism Hediste diversicolor. The validation data indicate that this system can be used to assess independent or interactive effects of climate change and environmental contamination on benthic communities. Researchers will be able to simulate the effects of these stressors on processes driven by microbial communities, sediment and seawater chemistry and to evaluate potential consequences to sediment toxicity using model organisms such as Hediste diversicolor.     

Effects of harvesting callianassid (ghost) shrimps on subtropical benthic communities

The effects of harvesting of callianassid shrimp (Trypaea australiensis) on the abundance and composition of macrobenthic assemblages in unvegetated sediments of a subtropical coastal embayment in Queensland, Australia were examined using a combination of sampling and manipulative experiments. First, the abundance and composition of the benthic infauna in an area regularly used for the collection of shrimp for bait by recreational anglers was compared with multiple reference areas. Second, a BACI design, with multiple reference areas, was used to examine the short-term effects of harvesting on the benthic assemblages from an intensive commercialised fishing competition. Third, a large-scale, controlled manipulative experiment, where shrimp were harvested from 10,000 m² plots at intensities commensurate with those from recreational and commercial operators, was done to determine the impacts on different components of the infaunal assemblage.

Only a few benthic taxa showed significant declines in abundance in response to the removal of ghost shrimp from the unvegetated sediments. There was evidence, however, of more subtle effects with changes in the degree of spatial variation (patchiness) of several taxa as a result of harvesting. Groups such as capitellid polychaetes, gammarid amphipods and some bivalves were significantly more patchy in their distribution in areas subjected to harvesting than reference areas, at a scale of tens of metres. This scale corresponds to the patterns of movement and activity of recreational harvesters working in these areas. In contrast, patchiness in the abundance of ghost shrimp decreased significantly under harvesting at scales of hundreds of metres, in response to harvesters focussing their efforts on areas with greater numbers of burrow entrances, leading to a more even distribution of the animals. Controlled experimental harvesting caused declines in the abundance of soldier crabs (Mictyris longicarpus), polychaetes and amphipods and an increase in the spatial patchiness of polychaetes. Populations of ghost shrimp were, however, resilient to harvesting over extended periods of time. In conclusion, harvesting of ghost shrimp for bait by recreational and commercial fishers causes significant but localised impacts on a limited range of benthic fauna in unvegetated sediments, including changes in the degree of spatial patchiness in their distribution.     

Relationships between trophic organization of benthic communities and organic matter content in Tyrrhenian Sea sediments

The organic content of sediments, often considered as an important trophic source for the benthos, can be used as a measurement of the trophic status of marine ecosystems. Soft-bottom communities were studied between Leghorn and Elba Island, from 5 to 500 m depth. Total biomass and trophic structure (percent dominance of trophic guilds) were related to organic carbon content and C/N ratio of sediments. Sediment organic matter, depending on its quantity and quality, could act as a food source or a stress source for the community.     

Decline in diversity of early Palaeozoic loosely coiled gastropod protoconchs

Quantitative data on molluscan larval conch fossil assemblages of ages ranging from the Ordovician (Argentina and the Baltic region), through Silurian (Austria), Devonian (Poland) to Carboniferous (Texas) supplement knowledge of early planktonic gastropods communities transformations. They show that larval shells of the bilaterally symmetrical bellerophontids and dextrally coiled gastropods with a hook-like straight apical portion of the first whorl initially dominated. Their relative frequency, as well as that of the sinistrally coiled ‘paragastropods’, diminished during the Ordovician and Silurian to virtually disappear in the Late Devonian and Early Carboniferous. Already during the Ordovician, diversity of larvae with gently loosely coiled first whorl increased, to be replaced then with more and more tightly coiled forms. Both the aperture constrictions and mortality peaks, probably connected with hatching and metamorphosis, indicate that the Ordovician protoconchs with hook-like first coil represent both the stage of an embryo developing within the egg envelope and a planktonic larva. The similarity of the straight apex to larval conchs of hyoliths and advanced thecosome pteropods is superficial, as these were not homologous stages in early development.     

The effect of habitat stability on benthic invertebrate communities: the utility of species abundance distributions

Spatial and temporal patterns in the species abundance distribution of benthic invertebrate communities of 11 freshwater habitats (10 streams and a wind-swept lake shore) were examined with respect to habitat stability. Abundance patterns varied markedly between seasons at most sites. However, mean abundance distributions at 4 of the 5 unstable sites and the 2 most stable sites were dominated by one or two taxa with a large number of rare species, whereas sites of intermediate stability had more equitable distributions. Both the log series and log normal distributions were statistically indistinguishable, at the 5% level, from all the observed mean abundance patterns. In contrast, graphical comparisons of the observed and fitted distributions suggested the log series may be the better fit at most of the unstable sites and the two most stable sites, whereas the more equitable distribution at sites of intermediate stability suggested the log normal distribution was the better fit. If conditions at a site favoured one or two species, either through severe physical conditions, or through competitive superiority in the absence of disturbance then the log series distribution may result. However, if no species in the community was strongly advantaged over others, a log normal distribution should result. Given the discriminating power of the appropriate statistical test it may not, however, be possible to pick up these differences without graphical comparisons as well.     

Palaeoenvironmental setting (glaciations,sea level,and plate tectonics) of Palaeozoic major biotic radiations in the marine realm

The life on the Earth experienced periodically not only significant impoverishments (mass extinctions), but also remarkable rises in diversity. Two recent biodiversity curves and new information on glaciations, sea- level, and plate tectonics, permit to extend our knowledge on the latters. Four Palaeozoic major radiations in the marine realm are identified. They include the early Cambrian (PZMR1), Ordovician (PZMR2), Early Devonian (PZMR3), and mid-Permian (PZMR4) events. PZMR1 occurred immediately after the major end-Proterozoic glaciations, when global sea-level rose with low-magnitude fluctuations and huge well-connected oceans provided a peculiar space for biological innovations. PZMR2 happened at a time of unique sea-level highstand and well-connected watermasses. PZMR3 coincided with a relative sea-level lowstand, which, together with the presence of elongated island chains, might have enhanced the radiation by a rapid dispersal of organisms across shallow oceans and along connected shorelines. PZMR4 occurred at the end of the outstanding planetary-scale Late Palaeozoic glaciation. Generally, the Palaeozoic major radiations in the marine realm did not have an ultimate cause and did not occur in a similar palaeoenvironmental setting. The molecular clock approach suggests a possible link between the DNA-dated divergences of marine invertebrates and the identified major radiations.     

Organism–quartz interactions in structuring benthic communities: towards a marine bio-mineralogy?

Abiotic and biotic factors determine the distribution and structure of marine benthic communities but the processes invoked to explain such patterns are often inadequate. We demonstrate that the presence of quartz grains in sediments inhibits animal colonization on marine soft-bottoms. We suggest that this phenomenon may be related to the oxidant properties of the quartz crystal surface derived by the generation of silicon-based radicals due to water movement. The interaction between organisms and the crystallographic structure of substrata might play a neglected but important role in structuring coastal benthic communities.     

Recovery of benthic marine communities from the end‐Permian mass extinction at the low latitudes of eastern Panthalassa

Based on the quantitative community analysis using species‐level identifications, we track the restoration of benthic ecosystems after the end‐Permian mass extinction throughout the Lower Triassic of the western USA. New data on the palaeoecology of the Thaynes Group and Sinbad Formation are provided, which fill a gap between the recently studied palaeoecology of the Griesbachian–Dienerian Dinwoody Formation and the Spathian Virgin Formation. In the Sinbad Formation and Thaynes Group, 17 species (12 genera) of bivalves, 7 species and genera of gastropods and 2 species and genera of brachiopods are recognized. The new bivalve genus Confusionella (Pteriidae) is described. A comprehensive review of the whole Lower Triassic succession of benthic ecosystems of the western USA indicates that mid‐ and inner shelf environments show incipient recovery signals around the Griesbachian–Dienerian transition, during the Smithian and, most profound, during the early Spathian. Ecological data from youngest strata of the Dinwoody Formation as well as stratigraphic ranges of species suggest that the late Dienerian was likely a time interval of environmental stress for benthic ecosystems. Despite some evidence for short‐term environmental disturbances (e.g. shift of dominant taxa, transient drop in alpha‐diversity) during the Smithian–Spathian transition, benthic ecosystems did not show any notable taxonomic turnover at that time, in contrast to the major crisis that affected ammonoids and conodonts. Whereas alpha‐diversity of benthic communities generally increased throughout the Early Triassic, beta‐diversity remained low, which reflects a persistently wide environmental range of benthic species. This observation is in accordance with a recently proposed model that predicts a time lag between increasing within‐habitat diversity (alpha‐diversity) and the onset of taxonomic differentiation between habitats (beta‐diversity) during biotic recoveries from mass extinction events. The observation that beta‐diversity had not significantly increased during the Early Triassic might also provide an explanation for the comparably sluggish increase in benthic diversity during that time, which has previously been attributed to persistent environmental stress.     

The distribution of benthic marine algae

Hitherto only gametangial and carposporangial phases of Thuretellopsis peggiana Kylin have been reported. A study of this rare member of the Dumontiaceae (Cryptonemiales) in culture has disclosed the existence of an encrusting tetrasporangial phase, previously unknown, whilst the life history has been shown to be of the ‘Bonnemaisonia’ type.     

Biological traits approaches in benthic marine ecology: Dead ends and new paths

Biological traits analysis (BTA) links community structure to both ecological functions and response to environmental drivers through species’ attributes. In consequence, it has become a popular approach in marine benthic studies. However, BTA will reach a dead end if the scientific community does not acknowledge its current shortcomings and limitations: (a) uncertainties related to data origins and a lack of standardized reporting of trait information; (b) knowledge gaps on the role of multiple interacting traits on driving the organisms’ responses to environmental variability; (c) knowledge gaps regarding the mechanistic links between traits and functions; (d) a weak focus on the spatial and temporal variability that is inherent to the trait expression of species; and, last but not least, (e) the large reliance on expert knowledge due to an enormous knowledge gap on the basic ecology of many benthic species. BTA will only reach its full potential if the scientific community is able to standardize and unify the reporting and storage of traits data and reconsider the importance of baseline observational and experimental studies to fill knowledge gaps on the mechanistic links between biological traits, functions, and environmental variability. This challenge could be assisted by embracing new technological advances in marine monitoring, such as underwater camera technology and artificial intelligence, and making use of advanced statistical approaches that consider the interactive nature and spatio‐temporal variability of biological systems. The scientific community has to abandon some dead ends and explore new paths that will improve our understanding of individual species, traits, and the functioning of benthic ecosystems.     

Geochemical cycling of heavy metals in a marine coastal area: benthic flux determination from pore water profiles and in situ measurements using benthic chambers

Concentrations of the heavy metals Cd, Co, Cr, Cu, Fe, Mn, Ni, Pb and Zn were measured in sea water, suspended matter, sediments and pore water samples collected in a coastal area of the middle Tyrrhenian Sea. Concentration factors between pore water (extracted from the first centimeter of the sediments) and the overlying sea water (taken 30 cm above the sea bed) were less than 1 for Cr, Cu and Pb, 1–10 for Cd and Ni, 10–100 for Fe and Co, 100–1000 for Mn, and 1–100 for Zn.The benthic fluxes of heavy metals at the sediment-water interface were measured directly using in situ benthic chambers and calculated using Fick's first law during two experimental periods, one in 1986 and the other in 1988. The fluxes of Cu, Ni, Pb and Zn varied significantly over time; this appeared to be related to their relatively low ( 10) concentration factors. From the benthic chamber experiments, metals with positive fluxes were in the order: Mn > Fe > Co > Cd, while those with negative fluxes were: Zn > Pb > Ni Cu. Fluxes calculated using Fick's Law were: positive – Mn > Fe > Zn (or Zn > Fe) > Ni > Co > Cd, negative fluxes Pb > Cu > Cr.Measured (benthic chamber) and calculated (Fick's first law) fluxes for Co, Cd, Mn, Pb and Fe were comparable within an order of magnitude, although less agreement was found for Cu, Ni and Zn. Removal of Ni and Zn at the sediment-water interface has been proposed to explain the fact that the measured and calculated fluxes have opposite directions for these metals.     

Ammonoid age control of the Early Triassic marine reptiles from Chaohu (South China)

Here we described a series of ammonoid specimens from the Early Triassic of Chaohu, South China and recognized the occurrence of Procolumbites for the first time in this area. The Procolumbites layer is about one meter above the first appearance of Chaohusaurus, indicating that the oldest Chaohusaurus is within the Procolumbites Zone of middle Spathian age. This new age constrain is significantly older than the previously suggested Subcolumbites Zone assignment (early late Spathian). To date, Chaohusaurus is the oldest known ichthyopterygian.     

UV effects that come and go: a global comparison of marine benthic community level impacts

Ambient UV radiation has substantially increased during the last decades, but its impact on marine benthic communities is hardly known. The aim of this study was to globally compare and quantify how shallow hard‐bottom communities are affected by UV during early succession. Identical field experiments in 10 different coastal regions of both hemispheres produced a consistent but unexpected pattern: (i) UV radiation affected species diversity and community biomass in a very similar manner, (ii) diversity and biomass were reduced to a larger extent by UVA than UVB radiation, (iii) ambient UV levels did not affect the composition of the communities, and (iv) any UV effects disappeared during species succession after 2–3 months. Thus, current levels of UV radiation seem to have small, predictable, and transient effects on shallow marine hard‐bottom communities.     

Monitoring of marine benthic communities and taxonomic resolution: an approach through diverse habitats and substrates along the Southern Iberian coastline

Studies conducted along the southern Iberian coastline validate macrobenthic community analyses at taxonomic levels higher than that of species. Twelve studies on littoral benthic communities, carried out by the same research team, were selected spanning both a variety of sampling strategies (spatial, temporal, spatio-temporal) and substrate/habitat types (sediment, rock, algae). In order to establish differences between the results obtained at the taxonomic levels of species, family and order, similarities among stations were calculated using Spearman’s coefficient for ranges. A subset of three studies was selected to investigate possible differences in ‘best-explaining’ environmental variables with taxonomic level. The environmental variables selected at species level were the same as those found at levels of family and order. It is concluded that studies at the different levels of taxonomic resolution (species, family, order) lead to similar results both with regard to relative community distributions and the environmental variables associated with these. The importance of this result for monitoring similar benthic communities is discussed.     

System concepts and the evolution of benthic communities

Hoffman, Antoni 197804 IS: System concepts and the evolution of benthic communities.
Benthic communities can be regarded as open systems. Then, both the ecological and evolutionary behavior of a benthic community must be made clearly distinct from those of its constituent populations. Longevity of community structures through geological (or evolutionary) time appears to be related to both virtual eurytopy of the constituent species populations and elasticity of the Structures themselves. There is no single, major controlling factor to be found in characteristics of ecological communities, responsible for the ability of their structures to resist long-term environmental changes in geological time.