A new species of Ulmeritoides from Brazil (Ephemeroptera: Leptophlebiidae)

The leptophlebiid mayfly genus Ulmeritoides is composed of nine species, three of which have been recorded in Brazil: U. patagianus, U. uruguayensis, and U. misionensis. In the present paper, a new species of this genus, Ulmeritoides oepa sp.nov., is described and illustrated based on fifteen larvae collected in Uraricoera River, state of Roraima, northern Brazil. The species was compared to U. misionensis, U. tifferae, and U. guanacaste, the other species of Ulmeritoides known from the larval stage. U. opea sp.nov. can be distinguished from these species by the following combination of characteristics: 1) medial denticle on anteromedian emargination of labrum much larger than others; 2) anterior tibiae slightly stained black toward the apex; 3) medial femora with few dorsal spines, similar to short thick needles; 4) hind femora with numerous dorsal spines, similar to short thick needles; 5) medial femora with no medial black markings, apical brown markings. The new species seems to be more closely related to U. misionensis, another species in which the anteromedian emargination of the labrum has a median denticle much larger than the others. The studied specimens were deposited in the Invertebrates Collection of the Amazonian Research National Institute, Manaus, state of Amazonas, Brazil, and in the Entomological Collection of the Department of Zoology, Federal University of Rio Janeiro, Rio de Janeiro, state of Rio de Janeiro, Brazil.     

Using molecular methods to determine the origin of weed populations of Pereskia aculeata in South Africa and its relevance to biological control

New biological control agents are required in order to reach and sustain an adequate level of control of the declared environmental weed Pereskia aculeata Miller (Cactaceae) in South Africa. Identifying the origin of weed genotypes has been important in a number of biological control programmes and is likely to be of importance for the control of P. aculeata due to its disjunct native distribution and morphological polymorphisms between plants from different regions of the native and introduced distribution. DNA sequencing of the trnL chloroplastic intron and the phyC nuclear gene indicate that the South African weed population’s origin was in the southern region of native distribution. Inter-Simple Sequence Repeats (ISSRs) confirmed this result and added resolution to the analysis indicating that the native plants with the closest genetic distance to the South African weed population were found in Rio de Janeiro Province, Brazil. The relationship between the South African weed population and garden variety plants as well as the large genetic distance between the South African plants and the native plants suggests that the South African population may be the progeny of escaped garden variety plants that have been cultivated and possibly hybridized. The low levels of genetic variation within the South African population and the monophyly of the South African plants indicates that these plants are the progeny of a single introduction or multiple introductions from the same source. Rio de Janeiro Province in Brazil is the most appropriate region in which to survey for new biological control agents.     

Genomic surveillance of SARS-CoV-2 tracks early interstate transmission of P.1 lineage and diversification within P.2 clade in Brazil

The sharp increase of COVID-19 cases in late 2020 has made Brazil the new epicenter of the ongoing SARS-CoV-2 pandemic. The novel viral lineages P.1 (Variant of Concern Gamma) and P.2, respectively identified in the Brazilian states of Amazonas and Rio de Janeiro, have been associated with potentially higher transmission rates and antibody neutralization escape. In this study, we performed the whole-genome sequencing of 185 samples isolated from three out of the five Brazilian regions, including Amazonas (North region), Rio Grande do Norte, Paraíba and Bahia (Northeast region), and Rio de Janeiro (Southeast region) in order to monitor the spread of SARS-CoV-2 lineages in Brazil in the first months of 2021. Here, we showed a widespread dispersal of P.1 and P.2 across Brazilian regions and, except for Amazonas, P.2 was the predominant lineage identified in the sampled states. We estimated the origin of P.2 lineage to have happened in February, 2020 and identified that it has differentiated into new clades. Interstate transmission of P.2 was detected since March, but reached its peak in December, 2020 and January, 2021. Transmission of P.1 was also high in December and its origin was inferred to have happened in August 2020. We also confirmed the presence of lineage P.7, recently described in the southernmost region of Brazil, to have spread across the Northeastern states. P.1, P.2 and P.7 are descended from the ancient B.1.1.28 strain, which co-dominated the first phase of the pandemic in Brazil with the B.1.1.33 strain. We also identified the occurrence of a new lineage descending from B.1.1.33 that convergently carries the E484K mutation, N.9. Indeed, the recurrent report of many novel SARS-CoV-2 genetic variants in Brazil could be due to the absence of effective control measures resulting in high SARS-CoV2 transmission rates. Altogether, our findings provided a landscape of the critical state of SARS-CoV-2 across Brazil and confirm the need to sustain continuous sequencing of the SARS-CoV-2 isolates worldwide in order to identify novel variants of interest and monitor for vaccine effectiveness.     

Neue Arten der neotropischen Gattung Neolindus Scheerpeltz (Coleoptera,Staphylinidae)

New species of the neotropical genus Neolindus Scheerpeltz (Coleoptera, Staphylinidae). Five new species of the neotropical genus Neolindus from the Peruvian Amazon region and from Brazil (Rio de Janeiro) are described.     

Host-range Characterization of Two Pratylenchus coffeae Isolates from Brazil

Two isolates of Pratylenchus coffeae were collected from coffee roots (in Marília, São Paulo State, Brazil) and Aglaonema (in Rio de Janeiro City, Rio de Janeiro State, Brazil) and maintained in the laboratory on alfalfa callus. Twenty-four plants were tested in the greenhouse to characterize the host preference of these isolates. The host ranges of the isolates differed from each other and, interestingly, coffee, banana, and citrus were not among the better hosts of either isolate. Rather, sorghum, maize, rice, millet, okra, melon, eggplant, and lettuce were the best hosts of the Marília isolate. Poor hosts included French marigold, Rangpur lime, banana, sesame, peanut, sunflower, cotton, French bean, onion, and small onion. The best hosts of the Rio de Janeiro isolate were sesame, soybean, sorghum, castor oil plant, watermelon, squash, eggplant, and melon; the poorest hosts were French marigold, coffee, Rangpur lime, banana, sunflower, peanut, maize, millet, French bean, cotton, onion, sweet pepper, lettuce, okra, and small onion. These isolates have important molecular and morphological differences, suggesting host preference is linked to these characteristics.     

Long-term bat study on an island in the southeastern Brazilian coast with comparison of richness and composition of species among sites

Although Rio de Janeiro is one of the best sampled states of Brazil for bats, there are still some poorly studied islands on its coast. Hence, we inventoried the bat species of an island on the southwestern coast of Rio de Janeiro, compared five sites sampled within this island, and compared its bat community with seven other sites in the same region. We carried out sampling in July 1995 and from September 2006 to August 2010, comprising 58 samplings. We captured a total of 1502 individuals of 25 bat species with mist nets set far from roosts, or close to or inside roosts. The most abundant species were Artibeus lituratus, Molossus molossus, and Carollia perspicillata. Total sampling effort was 89,400 m² h. The present study was one out of five inventories carried out in the southwestern coast of Rio de Janeiro that registered more than 1000 bat individuals from more than 24 bat species. Long-term inventories on islands are still needed, because they can result in a large number of species and captures as observed in the present study.     

Ectoparasites of rodents and marsupials in the wild environment of Ilha Grande, State of Rio de Janeiro, Brazil

Ectoparasites collected from wild mammals of Ilha Grande, state of Rio de Janeiro, Brazil, are listed. The most frequent species of mammal was Proechimys dimidiatus (Gunther, 1877); Gigantolaelaps oudemansi Fonseca, 1939 and Polygenis lakoi Guimar?es, 1948 were the predominant species of acari and fleas, respectively.     

Fungemia in cancer patients in Brazil: Predominance of non-albicans species

The objective of this study was to characterize the epidemiology of candidemia in cancer patients in the city of Rio de Janeiro, Brazil. An 18-month survey of fungemia in patients with cancer was undertaken in three Hospitals in Rio de Janeiro. Forty-three episodes of candidemia were identified in 43 patients, 43 of which were episodes of candidemia; in ten cases the strains were not available for further identification of species and were excluded from this analysis. The overall distribution of fungi causing fungemia was: Candida albicans (5), Candida tropicalis (16), Candida parapsilosis (6), Candida guilliermondii (4), Candida lusitaniae (1) and Candida stellatoidea (1). Antifungal prophylaxis had been administered before the episode of fungemia in only six patients (18.2%): oral itraconazole in three patients and oral nistatin, low dose intravenous amphotericin B and oral fluconazole in one patient each. There was no difference in the presence of risk factors, clinical characteristics or in the outcome between albicans and non-albicans species, nor between Candida tropicalis and other non-albicans species. There was a clear predominance of non-albicans species, regardless of the underlying disease, antifungal prophylaxis or the presence of neutropenia. This revised version was published online in June 2006 with corrections to the Cover Date.     

Report of Didymocystis wedli Ariola, 1902 (Digenea; Didymozoidae) from Thunnus albacares in Brazil.

Didymocystis wedli a parasite from the gills of Thunnus albacares from the coast of the State of Rio de Janeiro, is described by use of light and scanning electron microscopy. This is the first report of this species in Brazil and South America. New data are presented on the surface topography as demonstrated by scanning electron microscopy.     

Phytogeography of the liverwort flora of the Atlantic Forest of southeastern Brazil

Abstract

This work analyzes the phytogeographic patterns of the liverwort flora of the Atlantic Forest of the Rio de Janeiro State, south-eastern Brazil. The analysis was based on inventories made in fragments of Atlantic Forest in the state, collections from the RB herbarium, and information from the checklist and database of the bryoflora of Rio de Janeiro. The phytogeographic pattern for each taxon was characterized based on its current distribution. Three hundred and sixty liverwort taxa are recognized for Rio de Janeiro. The liverwort flora varies along an altitudinal gradient within the Atlantic Forest, with the montane belt having the greatest species richness (238), the highest number of exclusive taxa (63) and the greatest number of endemic species (23). The predominant phytogeographic element is of neotropical species (49%), followed by disjunct liverworts (18%). Forty-one taxa (11%) are endemic to the country, of which 34 are restricted to the Atlantic Forest. In the lowland and submontane formations species are wide-ranging, whereas the montane and upper montane formations are characterized by endemic species or those disjunct with the Andes. The liverwort flora emphasizes the importance of the fragments of Atlantic Forest in Rio de Janeiro as a centre of diversity and endemism, supporting 50% of the total liverwort species known in Brazil, 72% of those recorded from Atlantic Forest and 55% of the endemic species of the country. Species with an Afro-American and Andean disjunction make up a characteristic part of the liverwort flora, probably reflecting the effects of long-distance dispersal by air currents, migration over land before the breakup of the continents and climatic similarities between the high-altitude grasslands and the northern Andes.     

Trilepis tenuis (Cyperaceae: Trilepideae), a new species from Rio de Janeiro, southeastern Brazil

Trilepis tenuis is described from the state of Rio de Janeiro, southeastern Brazil. It differs from the other four species ofTrilepis in its delicate habit and combined features of the contraligules and fructifications.     

Tijuca National Park: two pioneering restorationist initiatives in Atlantic forest in southeastern Brazil.

As a contribution to the environmental history of the Tijuca National Park, we report on two pioneering restorationist initiatives and list its the mammal species now found in this urban park. The Tijuca National Park (TNP), a 3,200 ha urban park covered by secondary tropical forest, is located within Rio de Janeiro, in southeastern Brazil. The two restorationist initiatives were a pioneer tropical forest restoration project in the nineteenth century and a fauna management project in the 70' s. The mammal list presented here was based on specimens in the Museu Nacional do Rio de Janeiro and on publications. The mammal community of TNP is composed of 49 species, of which 11 are on regional red lists, and four are on the 2003 IUCN Red List of Threatened Species. Occurrence of these threatened species and the park history itself made the TNP a priority site for studying conservation, management, and monitoring. Besides maintaining fauna and flora (including threatened species) diversity, the park benefits the population of Rio de Janeiro by providing water, green areas, and recreational and touristic opportunities.     

How much fruit do fruit-eating frogs eat? An investigation on the diet of Xenohyla truncata (Lissamphibia: Anura: Hylidae)

This paper presents the results of a 22-month survey and the examination of the intestinal content of 356 specimens of Xenohyla truncata (Anura: Hylidae) from Restinga de Maricá, Rio de Janeiro, Brazil. Our results confirm prior observations that fruits are intrinsic to the diet of these frogs. In addition, these new data increase our understanding of the relationship between frogs and the plants they feed upon. Plant consumption follows availability of fruits in the area, indicating that the diversity of fruits consumed by the frogs does not represent choice, but rather plant phenology and fruit availability.     

A new species of Bricelochlorops Paganelli and the first record of Urubambina rufa (Duda) (Diptera: Chloropidae) from Brazil

The subfamily Chloropinae comprises about 442 described species, with only one species recorded from the Brazilian Amazon. The genus Bricelochlorops Paganelli was represented by a unique species from Rio de Janeiro, Brazil. The species Urubambina rufa (Duda) is the only species of the genus Urubambina Paganelli and has been recorded only from Peru. A new species of Bricelochlorops, B. celutae sp. nov., is described here and Urubambina rufa is recorded for the first time in Brazil. Both species were collected in the state of Acre. A key to species of Bricelochlorops is provided.     

Additions to the mycobiota of the weed Lantana camara (Verbenaceae) in southeastern Brazil

A sequel to the work of systematic surveying the mycobiota of Lantana camara aimed at finding potential biocontrol agents, was carried out during 1995–1996 covering part of its centre of origin in Brazil (state of Minas Gerais). Fifty-eight sampling sites, representing the four main climatic types in the state of Minas Gerais, were surveyed. Additional ad hoc collections were made in the states of Bahia, Espírito Santo, Paraná Rio de Janeiro and São Paulo. Fifteen fungal species were recorded in association with L. camara including the previously undescribed species Phomopsis lantanae-glutinosae sp. nov. Five fungi are also newly recorded on this host in Brazil: Cercospora lantanicola Corynespora cassiicola Meliola ambigua Mycovellosiella lantaniphila and Phomopsis lantanae. The following fungi, previously recorded on L. camara in Brazil, are recorded here for the first time in Minas Gerais: Dendryphielia aspera Micropustulomyces mucilaginosus Mycovellosiella lantanae Pseudocercospora guianensis and Puccinia lantanae.     

mtDNA ancestry of Rio de Janeiro population,Brazil

Polymorphism studies concerning HVI and HVII regions of mitochondrial DNA (mtDNA) have improved the understanding of the admixture genetic process related to the occupation of the continents by human population groups. We have analyzed the mtDNA lineages of 190 healthy and maternally unrelated individuals born in the metropolitan region of the Rio de Janeiro city, the capital of the State of Rio de Janeiro, southeastern Brazil. The data showing that 57.9, 25.3 and 16.8 % of the matrilineages found in Rio de Janeiro come from African, Amerindian and European population groups. They are, respectively, in close agreement with historical records which indicate that the admixture population of Brazil is the resulting of interethnic asymmetry crosses between individuals from those population groups. The high proportion of African mtDNA lineages in the population of Rio de Janeiro is in accordance with studies related to other Brazilian states.     

Preliminary data on the performance of Aedes aegypti and Aedes albopictus immatures developing in water-filled tires in Rio de Janeiro

A monthly survey of Aedes aegypti and Aedes albopictus immatures in discarded tires at a site in metropolitan Rio de Janeiro showed that Ae. albopictus was much more abundant in the rainy season, but Ae. aegypti abundance showed a less clear seasonal pattern. Pupal masses for Ae. albopictus showed a seasonal trend. In contrast, Ae. aegypti pupae did not show any clear trend in weight. Large Ae. albopictus pupae were found in the warmer months, when water volume was higher, pH lower and larval abundance lower. Further studies should be carried out to assess how seasonal variations in body size may impact vector competence of these species in Brazil.     

GEOGRAPHIC GENETIC STRUCTURE IN THE FRANCISCANA DOLPHIN (PONTOPORIA BLAINVILLEI)

The franciscana, Pontoporia blainvillei , is endemic to the South Atlantic coast of South America. The species is of conservation concern because it suffers elevated mortality rates due to incidental captures in fishing nets, and perhaps it is one of the most threatened small cetaceans in this region. Previous morphological and genetic studies have suggested the existence of at least two distinct stocks to the north and south of Santa Catarina Island in Brazil. Fixed differences were found between a sample from Rio de Janeiro and one from Rio Grande do Sul, in southern Brazil. Using 94 sequences of the control region of mitochondrial DNA, we examined the genetic structure of the species. We found no shared haplotypes between Rio de Janeiro and samples from the southern range of the species distribution. However, a phylogenetic analysis suggests that the former population is diphyletic with respect to the southern samples. This suggests that the populations have not been isolated long enough to reach reciprocal monophyly. Furthermore, genetic differentiation is broadly consistent with a simple model of isolation by distance, that therefore appears as an alternative to a model of strict isolation of two stocks. The estimated levels of gene flow are higher among neighboring populations, and decrease as more distant localities are compared. Finally, the molecular data suggest that franciscanas have expanded in Rio de Janeiro.