Chemical Composition,Antibacterial, Antibiofilm and Synergistic Properties of Essential Oils from Eucalyptus globulus Labill. and Seven Mediterranean Aromatic Plants

Essential oils (EOs) from Eucalyptus globulus Labill . ssp. globulus and from Mediterranean autochthonous aromatic plants – Thymus mastichina L., Mentha pulegium L., Rosmarinus officinalis L., Calamintha nepeta (L.) Savi ssp. nepeta, Cistus ladanifer L., Foeniculum vulgare L., Dittrichia viscosa (L.) Greuter ssp. viscosa – were extracted by hydrodistillation and characterized by GC‐FID and NMR spectroscopy. EOs were evaluated for antimicrobial properties against several bacterial strains, using diverse methods, namely, the agar disc‐diffusion method, the microdilution method, the crystal violet assay and the Live/Dead staining for assessment of biofilm formation. Potential synergy was assessed by a checkerboard method. EOs of R. officinalis and C. ladanifer showed a predominance in monoterpene hydrocarbons (> 60%); EOs of C. nepeta, M. pulegium, T. mastichina, E. globulus and F. vulgare were rich in oxygenated monoterpenes (62 – 96%) whereas EO of D. viscosa was mainly composed of oxygenated sesquiterpenes (54%). All EOs showed antimicrobial activity; M. pulegium and E. globulus generally had the strongest antimicrobial activity. EO of C. nepeta was the most promising in hampering the biofilm formation. The combinations D. viscosa/C. nepeta and E. globulus/T. mastichina were synergistic against Staphylococcus aureus. These results support the notion that EOs from the aromatic plants herein reported should be further explored as potential pharmaceuticals and/or food preservatives.     

Essential‐Oil Diversity of Three Calamintha Species from Greece

The aim of the present study was to contribute to the knowledge of the essential‐oil composition of the Calamintha officinalis‐nepeta complex in Greece and to clarify the main patterns of its variation. The oils obtained from 22 wild‐growing populations of C. glandulosa, C. nepeta, and C. menthifolia were studied. They could be classified into two different chemotypes, which correspond to the main biosynthetic routes of the C(3)‐oxygenated p‐menthane compounds. Chemotype I includes oils rich in trans‐piperitone oxide, cis‐piperitone oxide, and piperitenone oxide, while Chemotype II comprises oils rich in pulegone and menthone or menthone and isomenthone. Within both chemotypes, quantitative fluctuations of the main components were observed. Comparison with published data showed that the presence of Chemotype II has not been observed before in C. menthifolia, while Chemotype I has been reported in C. nepeta plants from Greece for the first time.     

Taxonomy of carex sect. atratae (cyperaceae) in the southern rocky mountains

The sectionAtratae is highly differentiated in the southern Rocky Mountain region where the group has developed several endemic species. Eleven species are recognized, and three new combinations are proposed:C. parryana ssp.hallii, C. parryana ssp.idahoa, andC. norvegica ssp.stevenii.     

Studies in the cyperaceae of Thailand

Ten species ofCarex and one species ofKobresia from Thailand are taxonomically discussed, and some new range extensions into Thailand are noted. Described as new areCarex subinclinata andC. thailandica, both belonging to the sectionIndicae, andC. speciosa ssp.latifolia of the sectionRadicales. Two new combinations proposed areCarex helferi ssp.mapanifolia, andC. speciosa ssp.platyrhina.     

Megalodontidae du Trias supérieurdans la chaine Taurique (Turquie méridionale)

Recent discoveries of Triassic formations in thewestern Taurides have disclosed extensive carbonates of Upper Triassic age containing abundant Megalodonts. Four outcrops have provided for the first time in Turkey, the genera Dicerocardium, Physocardia, Cornucardia, Neomegalodon, Triadomegalodon, Rhaetomegalodon and several species are described, among which C. turcencis n. sp. and R. incisus gutnici n. ssp. These fauna typically belong to the assemblages found in the Hauptdolomit and Dachsteinkalk of central and southern Europe.     

The composition and properties of gum exudates from subspecies of Acacia tortilis

Gum specimens from Acacia tortilis ssp. spirocarpa, ssp. raddiana var. pubescens (two specimens) and ssp. heteracantha (three specimens) have been analysed. The results are of chemotaxonomic interest. Although the gum from ssp. raddiana var. pubescens appears to be intermediate between those from ssp. spirocarpa and ssp. heteracantha in terms of some of the analytical parameters, the overall impression is that ssp. raddiana is more similar chemically to ssp. spirocarpa than to ssp. heterocantha. The latter yields a viscous, proteinaceous polysaccharide that differs from those from both ssp. spirocarpa and ssp. raddiana by having a much higher ratio of arabinose to galactose, higher nitrogen and methoxyl contents, and much higher intrinsic viscosity and molecular weight; preliminary experiments have shown this gum to consist of two components.     

Sesquiterpene lactones of Artemisia: TLC analysis and taxonomic significance

Samples of Artemisia arbuscula ssp. arbuscula, A. tridentata ssp. tridentata, ssp. wyomingensis, ssp. vaseyana and ssp. vaseyana f. spiciformis were collected from various locations in Montana and analyzed by TLC for their sesquiterpene lactone content. Artemisia tridentata ssp. tridentata and ssp. wyomingensis are distinct morphologically and chemically, whereas ssp. vaseyana has three distinct chemical groups not yet separated morphologically. Artemisia arbuscula ssp. arbuscula and A. tridentata ssp. vaseyana f. spiciformis are easily separated by morphology but have identical TLC patterns. It has been further shown that the sesquiterpene lactones produced for a particular species or subspecies are the same regardless of the time of the year collected, although the quantity varies from winter to summer.     

Calamintha nepeta L. (Savi) as source of phytotoxic compounds: bio-guided fractionation in identifying biological active molecules

Calamintha nepeta L. (Savi), known as Lesser Catmint, is a Mediterranean species belonging to the Labiatae family, considered an important source of natural compounds. Since little is known about phytotoxic potential of Lesser Catmint, the bio-guided fractionation method was employed to isolate and identify some compounds, prerequisite for their possible future use in weed management. Leaves and stems of catmint were extracted with methanol and fractionated using n-hexane, chloroform, ethyl acetate and n-butanol, solvents with different polarity. The potential phytotoxicity of the methanolic extract and its fractions, evaluated by ED₅₀ values comparison, was assayed in vitro on seed germination and root growth of lettuce (Lactuca sativa L.). Germination and root growth of lettuce were strongly inhibited by catmint methanolic extract and its fractions, showing the following hierarchy of phytotoxicity for both physiological processes: ethyl acetate ≥ n-hexane > chloroform ≥ n-butanol. In the most active fraction, analyzed by HPLC, 5 poliphenols, gallic, vanillic, syringic, p-coumaric and ferulic acids, were identified and quantified. Whereas, the n-hexane fraction was a mixture of 32 chemicals, mainly composed of terpenoids and fatty acids, as analyzed by gas chromatography–mass spectrometry (GC–MS). Further, GC analysis allowed to quantify 5 compounds: camphor, trans-caryophyllene, menthol, farnesene and pulegone. Furthermore, both fractions inhibited seed germination and root growth of two of the most common weeds, Amaranthus retroflexus and Echinochloa crus-galli. The results confirmed the phytotoxic activity of C. nepeta L. (Savi) due to the presence of different molecule classes with biological activity and their potential future application as bio-herbicides.     

Numerical analysis of the floristic composition of localities including Hierochloë(Poaceae) species in Northern Europe

Lists were made of the vascular plant species associated with Hierochloë australis (5 localities), H. odorata ssp. odorata (79 localities), H. odorata ssp. baltica (20 localities), H. hirta ssp. hirta (17 localities), H. hirta ssp. arctica (53 localities) and H. alpina ssp. alpina (5 localities). The localities were classified by the TABORD computer program to produce phytosociological tables. An ordination of localities and of selected species was also made using the ORDINA program. Significant groups of species were distinguished by using Fisher's exact test of probability. All the H. australis localities were in mixed forests. In general, the natural habitats of H. odorata spp. odorata are fens and grasslands in the mountains and on the seashores of Scandinavia, those of H. odorata ssp. baltica are on brackish-water shores of the Baltic, those of H. hirta ssp. hirta on sandy or gravelly river banks and lake-shores, and those of H. hirta ssp. arctica are on fens and grasslands in the northern boreal forests. These latter four taxa occur, in addition, in various anthropogenic, or semi-natural, disturbed and/or unstable habitats. Their scattered occurrence in S Scandinavia and C Europe is probably more related to sporadic long-distance dispersal, than to their being glacial relicts. The natural habitats of H. alpina ssp. alpina are exposed mountain heaths. It is suggested that H. odorata ssp. odorata, and possibly H. alpina ssp. alpina, survived the last glaciation in refugia off the Norwegian coast, and that H. odorata ssp. baltica and H. hirta ssp. hirta may have arisen by polyploidy within Scandinavia during the Post-glacial period. H. hirta ssp. arctica probably immigrated into Scandinavia from the east during the Post-glacial and H. australis from the south. The results are considered in relation to the views previously expressed in the literature and the analytic techniques used are discussed. This work has been supported by grants from the University of Lund, for which I am duly grateful.     

Volatile compounds from some wild growing aromatic herbs of the Lamiaceae from southern France

Abstract

The composition of the volatile fraction in selected aromatic plants of the Lamiaceae from garrigue sites in southern France is described. Calamintha nepeta appeared heterogeneous. The oil was dominated by piperitone oxide, and piperitenone oxide or by pulegone and menthone. In Nepeta nepetella, nepetalactone, almost exclusively the (4a-α, 7α, 7a-β)-isomer, made up more than 85% of the essential oil. Dichloromethane extracts from Teucrium polium contained germacrene D or sabinene as main components, α-pinene, β-pinene and β-caryophyllene in varying proportions as further important constituents, and various minor components depending on the origin.     

Genome Sequencing of up to 6,000-Year-Old Citrullus Seeds Reveals Use of a Bitter-Fleshed Species Prior to Watermelon Domestication

Iconographic evidence from Egypt suggests that watermelon pulp was consumed there as a dessert by 4,360 BP. Earlier archaeobotanical evidence comes from seeds from Neolithic settlements in Libya, but whether these were watermelons with sweet pulp or other forms is unknown. We generated genome sequences from 6,000- and 3,300-year-old seeds from Libya and Sudan, and from worldwide herbarium collections made between 1824 and 2019, and analyzed these data together with resequenced genomes from important germplasm collections for a total of 131 accessions. Phylogenomic and population-genomic analyses reveal that (1) much of the nuclear genome of both ancient seeds is traceable to West African seed-use “egusi-type” watermelon (Citrullus mucosospermus) rather than domesticated pulp-use watermelon (Citrullus lanatus ssp. vulgaris); (2) the 6,000-year-old watermelon likely had bitter pulp and greenish-white flesh as today found in C. mucosospermus, given alleles in the bitterness regulators ClBT and in the red color marker LYCB; and (3) both ancient genomes showed admixture from C. mucosospermus, C. lanatus ssp. cordophanus, C. lanatus ssp. vulgaris, and even South African Citrullus amarus, and evident introgression between the Libyan seed (UMB-6) and populations of C. lanatus. An unexpected new insight is that Citrullus appears to have initially been collected or cultivated for its seeds, not its flesh, consistent with seed damage patterns induced by human teeth in the oldest Libyan material.     

The growth,reproductive phenology,and longevity of non-tide-pool Fucus distichus (L.) powell in New England

The growth, reproductive phenology, and longevity of in situ populations of Fucus distichus L. ssp. edentatus (De la Pylaie) Powell and F. distichus L. ssp. evanescens (C. Agardh) Powell were evaluated in New England. Both subspecies exhibited maximum growth during early summer, a slight decline in late summer, and a brief resurgence in the early fall. The maximum growth rates (in terms of elongation) for F. distichus ssp. edentatus and ssp. evanescens were 3.5 and 3.7 cm/28 days, respectively. Populations of both subspecies showed a distinct bimodal reproductive periodicity, with maxima in the spring and fall. Even so, individuals were either reproductive in the spring or fall but never in both seasons. After reproduction, receptacles dehisced and plants either became vegetative or died. Higher rates of plant attrition were observed during periods of reproduction than during non-reproductive periods.     

To the knowledge of the leaf beetle genus Cystocnemis (Coleoptera, Chrysomelidae)

Four subspecies of Cystocnemis discoidea are distinguished; two subspecies are described as new to science based on investigation of intraspecific variation in different parts of the species range, and ssp. gebleri was resurrected from synonymy. The ways of speciation in highland-hollow landscapes are discussed. The alpine subspecies C. discoidea oreas ssp. n. has an altibiome disjunction with the nominotypical subspecies. Similarity of the alpine subspecies of C. discoidea to the species from the subgenus Entomomela was found to be the reason of permanent confusion of representatives of these taxa. The subgenus Entomomela is transferred from the genus Oreomela to the genus Cystocnemis. A key to species and subspecies of the genus Cystocnemis is given.     

Inhibition of Salmonella enterica Cells in Deli-Type Salad by Enterocin AS-48 in Combination with Other Antimicrobials

The cyclic antibacterial peptide enterocin AS-48 acted synergistically with p-hydroxybenzoic acid methyl ester (PHBME) and with 2-nitropropanol against Salmonella enterica serovar Enteritidis CECT 4300 in Russian salad. In challenge tests on a cocktail of Salmonella strains (S. enterica ssp. enterica serotype Typhi CECT 409, S. enterica ssp. enterica serovar Choleraesuis CECT 915, S. enterica ssp. enterica serovar Enteritidis CECT 4300, S. enterica ssp. arizonae serovar Arizonae CECT 4395, and S. enterica ssp. salamae CECT 4000) in salad at 10°C, the combinations of PHBME and AS-48 (80 μg/g) or 2-nitropropanol and AS-48 (40 μg/g) reduced the concentrations of viable Salmonella from 4.27 to 4.75 log CFU/g down to the limit of detection for 7 days. Salmonella populations did not increase in control samples (without any antimicrobials or in the presence of AS-48 alone) probably due to the low pH of this type of salad and low temperature of incubation, but retained over 85% viability after 1 week. This work opens new possibilities to expand the spectrum of inhibition of enterocin AS-48 against Salmonella enterica.     

Genetic differentiation and postglacial migration of the Dactylorhiza majalis ssp. traunsteineri/lapponica complex into Fennoscandia

Eight variable regions (microsatellites, insertion/deletion and duplication regions) from the plastid DNA genome were analyzed for 91 populations belonging to Dactylorhiza majalis ssp. traunsteineri and closely related taxa. A total of 36 composite plastid haplotypes were found. The two dominating haplotypes had a clear geographic distribution suggesting at least two separate immigration routes into Scandinavia after the last glaciation: one southwestern route and one or two southeastern routes. D. majalis ssp. traunsteineri could not be clearly separated from any of the other taxa included in the study except for D. majalis ssp. sphagnicola. The morphologically similar taxa D. majalis ssp. traunsteineri, D. majalis ssp. lapponica and D. majalis ssp. russowii showed no genetic differentiation, and therefore we suggest an amalgamation of the three taxa into one broadly circumscribed subspecies; D. majalis ssp. lapponica. The plastid data also revealed incidents of hybridization and possible introgression between D. majalis ssp. lapponica and other members of the genus, e.g., D. incarnata.     

Lactobacillus delbrueckii ssp. lactis and ssp. bulgaricus: a chronicle of evolution in action

Background

Lactobacillus delbrueckii ssp. lactis and ssp. bulgaricus are lactic acid producing bacteria that are largely used in dairy industries, notably in cheese-making and yogurt production. An earlier in-depth study of the first completely sequenced ssp. bulgaricus genome revealed the characteristics of a genome in an active phase of rapid evolution, in what appears to be an adaptation to the milk environment. Here we examine for the first time if the same conclusions apply to the ssp. lactis, and discuss intra- and inter-subspecies genomic diversity in the context of evolutionary adaptation.

Results

Both L. delbrueckii ssp. show the signs of reductive evolution through the elimination of superfluous genes, thereby limiting their carbohydrate metabolic capacities and amino acid biosynthesis potential. In the ssp. lactis this reductive evolution has gone less far than in the ssp. bulgaricus. Consequently, the ssp. lactis retained more extended carbohydrate metabolizing capabilities than the ssp. bulgaricus but, due to high intra-subspecies diversity, very few carbohydrate substrates, if any, allow a reliable distinction of the two ssp. We further show that one of the most important traits, lactose fermentation, of one of the economically most important dairy bacteria, L. delbruecki ssp. bulgaricus, relies on horizontally acquired rather than deep ancestral genes. In this sense this bacterium may thus be regarded as a natural GMO avant la lettre.

Conclusions

The dairy lactic acid producing bacteria L. delbrueckii ssp. lactis and ssp. bulgaricus appear to represent different points on the same evolutionary track of adaptation to the milk environment through the loss of superfluous functions and the acquisition of functions that allow an optimized utilization of milk resources, where the ssp. bulgaricus has progressed further away from the common ancestor.

Electronic supplementary material

The online version of this article (doi:10.1186/1471-2164-15-407) contains supplementary material, which is available to authorized users.     

Comparative studies on the reproductive systems ofCardamine flexuosa,C. impatients,C. scutata,andC. lyrata,cruciferae

The reproductive systems of fourCardamine species were compared.C. flexuosa ssp.flexuosa, a self-pollinated winter annual in fallow paddy fields, produces numerous small seeds.C. flexuosa ssp.fallax, a self-pollinated year-long annual in gardens and roadsides, also produces many small seeds.C. impatiens, a self-pollinated annual in forest margins, similarly produces numerous small seeds.C. scutata is a self-pollinated perennial in ill-drained paddy fields and creeks; its vegetative reproduction is not predominant, and it produces relatively many seeds.C. lyrata, a cross-pollinated perennial with self-incompatibility in ill-drained paddy fields and creeks, produces fewer and heavier seeds, but it does produce many ramets. Moreover, in seed-dispersal mechanisms and germination behavior of fourCardamine species several adaptive characteristics to their habitats are found. These observations on the reproductive systems of fourCardamine species apparently present different characteristics of life-history strategy for each of them.     

No-till reduces global warming potential in a subtropical Ferralsol

Aims

We investigated the link between tree community composition and soil microbial community biomass and structure in central-eastern Spain.

Methods

The effects of the forest stand composition on the soil organic matter dynamics and on the structure and activity of the soil microbial community have been determined using phospholipid fatty acid profiles and soil enzymatic activities.

Results

The soil and litter N and C contents were higher in Pinus nigra Arn. ssp. salzmannii and Quercus ilex mixed forest stands (SBHO) and in long-term unmanaged Pinus nigra Arn. ssp. salzmannii forest stands (SBPC) than in pure Pinus nigra Arn. ssp. salzmannii forest stands (SBPA) and Pinus nigra Arn. ssp. salzmannii and Juniperus thurifera mixed forest stands (SBSJ). The bacterial biomass was significantly higher in SBSJ and SBPA than in SBPC and SBHO. The results show an uncoupling of the soil microbial biomass and its activity. pH is related to microbial biomass and its community structure under a Mediterranean humid climate.

Conclusions

The tree species seem to affect the biomass of the soil microbial community and its structure. The pH, but not the C/N ratio, is a factor influencing the microbial dynamics, biomass, and community structure.     

Baikal phytogeographic node as the newest center of endemism of Inner Asia

The Baikal center of phytodiversity is a consequence of complicate orographic dislocations that caused conjugated changes in the climate and geochemical processes in the lithosphere. The climatic changes led to adaptive florogenesis. Three phenomena of this kind have been recorded in the Baikal region. The most ancient (Early Tertiary) endemism is connected with the formation of forms of mountainous xerophytic elements of the Selenga Nountains (Vicia tscydenii Malyschev, Festuca dahurica (St.-Yves) V. Krecz. et Bobrov, Astragalus chorinensis Bunge). The latest endemics are found in the mountains of Northeastern Baikal region, their subspecies rank points to their young age and is more clearly exhibited in boreal genera Carex (C. pediformis ssp. kirilovii Turcz.), Festuca (F. ovina ssp. vylazaniae E. Alexeev, F. rubra ssp. baikalensis (Griseb.) Tzvelev), Draba (D. hirta ssp. bargusinensis Nikiforova), etc. An intermediate position in the temporal and florogenetic aspect is expressed in the endemism of the Sayan-Hangayn Range where speciation manifested itself both in the generic series of boreal genesis (Carex tatjanae Malyschev, Stellaria bungeana Fenzl s. str.), and in the ancient Mediterranean ones (Allium malyschevii N. Friesen, Oxytropis kuznetzovii Kryl. et Steinb., Artemisia pycnorhyza Ledeb.).