Development of a transgenic early flowering pear (Pyrus communis L.) genotype by RNAi silencing of PcTFL1-1 and PcTFL1-2

Trees require a long maturation period, known as juvenile phase, before they can reproduce, complicating their genetic improvement as compared to annual plants. 'Spadona', one of the most important European pear (Pyrus communis L.) cultivars grown in Israel, has a very long juvenile period, up to 14?years, making breeding programs extremely slow. Progress in understanding the molecular basis of the transition to flowering has revealed genes that accelerate reproductive development when ectopically expressed in transgenic plants. A transgenic line of 'Spadona', named Early Flowering-Spadona (EF-Spa), was produced using a MdTFL1 RNAi cassette targeting the native pear genes PcTFL1-1 and PcTFL1-2. The transgenic line had three T-DNA insertions, one assigned to chromosome 2 and two to chromosome 14 PcTFL1-1 and PcTFL1-2 were completely silenced, and EF-Spa displayed an early flowering phenotype: flowers developed already in tissue culture and on most rooted plants 1-8?months after transfer to the greenhouse. EF-Spa developed solitary flowers from apical or lateral buds, reducing vegetative growth vigor. Pollination of EF-Spa trees generated normal-shaped fruits with viable F1 seeds. The greenhouse-grown transgenic F1 seedlings formed shoots and produced flowers 1-33?months after germination. Sequence analyses, of the non-transgenic F1 seedlings, demonstrated that this approach can be used to recover seedlings that have no trace of the T-DNA. Thus, the early flowering transgenic line EF-Spa obtained by PcTFL1 silencing provides an interesting tool to accelerate pear breeding.     

林木遗传图谱构建的研究进展

高密度分子遗传连锁图谱对分析植物遗传变异、标记目标性状、数量性状定位和分子辅助选择改良性状均具重要价值.由于林木具有世代长、高度杂合、遗传负荷大等遗传特性,使其遗传图谱研究不同于其他物种,其遗传连锁图谱的构建相对复杂.目前,一些林木的遗传连锁图谱已经产生.简要综述了林木遗传图谱研究现状和策略,并对构建高质量林木遗传图谱作了展望.     

The Evolution of Fruit Tree Productivity: A Review

The Evolution of Fruit Tree Productivity: A Review. Domestication of fruit trees has received far less attention than that of annual crop plants. In particular, very little is known about the evolution of fruit tree productivity. In the wild, most tree species reach reproductive maturity after a long period of juvenility and even then, sexual reproduction appears sporadically, often in a mode of masting. Environmental constraints limit trees’ reproductive activity in their natural, wild habitats, resulting in poor, irregular productivity. Early fructification and regular, high rates of productivity have been selected by people, unconsciously and consciously. The reviewed evidence indicates an evolutionary continuum of productivity patterns among trees of wild habitats, intermediary domesticates, and the most advanced domesticates. Alternate bearing appears to represent an intermediate step in the fruit tree evolutionary pathway. The existence of a molecular, genetic mechanism that controls trees’ sexual reproduction and fruiting pattern is suggested.     

Trends of genetic study of forest tree and development of useful traits for apple Biotechnology

Conclusion  Forest trees have long generation times and arc highly heterogeneous, so few extended pedigrees are available. Because of these limitations, there is a greater potential for DNA-markers to improve genetic analysis and to accelerate breeding in forest trees. In deciduous fruit plants, the most important traits are fruit qualities such as acidity, sugar content, fruit size, and total yield. As these are quantitative traits that appear to be controlled by a number of loci, it is difficult to make progress in the quick improvement of fruit quality, requiring the elucidation of the position and function of QTLs affecting these traits. Although QTL analysis is important for genetic enhancement, it is time consuming work. Also, for many years until now, DNA-markers have not been applied to practical tree improvement because of technical and theoretical limitations. High levels of heterozygosity and linkage equilibrium of markers in populations were considered to be serious limitations. Now, it is carefully suggested that molecular breeding should be primarily based on the cloning and characterization of useful agronomic traits for direct application to forest tree plants.For example, a monogenic trait that specifically contributes to flower and fruit development is useful for control of thinning. Biotechnology is likely to give valuable genetic improvement of tree species and the adopted strategy based upon biotechnology provides a model system in similar studies for other fruit and woody species. This paper was presented at the 11th Symposium on Plant Biotechnology entitled “Plant Genes and Genetic Resources” organized by Gynheung An, held July 4–5, 1997, by the Botanical Society of Korea     

Root distribution in an Amazonian seasonal forest as derived from δ13C profiles

Carbon isotope ratios of the main stem in trees, saplings, and seedlings were correlated with their main stem diameter in an Amazonian seasonal forest. This correlation became the basis of using carbon isotope ratios of roots from various levels of the soil profile in order to determine root distribution from emergent, canopy and subcanopy trees, saplings and herbaceous understorey plants. It was observed that the distribution of roots in the soil profile is horizontally and vertically heterogeneous. Pockets of roots from saplings or herbaceous understorey plants were found as deep as 4 m and pockets of roots from emergent trees were found as shallow as 1 m depth.     

Genetic transformation of fruit trees: current status and remaining challenges

Genetic transformation has emerged as a powerful tool for genetic improvement of fruit trees hindered by their reproductive biology and their high levels of heterozygosity. For years, genetic engineering of fruit trees has focussed principally on enhancing disease resistance (against viruses, fungi, and bacteria), although there are few examples of field cultivation and commercial application of these transgenic plants. In addition, over the years much work has been performed to enhance abiotic stress tolerance, to induce modifications of plant growth and habit, to produce marker-free transgenic plants and to improve fruit quality by modification of genes that are crucially important in the production of specific plant components. Recently, with the release of several genome sequences, studies of functional genomics are becoming increasingly important: by modification (overexpression or silencing) of genes involved in the production of specific plant components is possible to uncover regulatory mechanisms associated with the biosynthesis and catabolism of metabolites in plants. This review focuses on the main advances, in recent years, in genetic transformation of the most important species of fruit trees, devoting particular attention to functional genomics approaches and possible future challenges of genetic engineering for these species in the post-genomic era.     

Sulfur Metabolism in Plants: Are Trees Different?

Sulfur metabolite levels and sulfur metabolism have been studied in a significant number of herbaceous and woody plant species. However, only a limited number of datasets are comparable and can be used to identify similarities and differences between these two groups of plants. From these data, it appears that large differences in sulfur metabolite levels, as well as the genetic organization of sulfate assimilation and metabolism do not exist between herbaceous plants and trees. The general response of sulfur metabolism to internal and/or external stimuli, such as oxidative stress, seems to be conserved between the two groups of plants. Thus, it can be expected that, generally, the molecular mechanisms of regulation of sulfur metabolism will also be similar. However, significant differences have been found in fine tuning of the regulation of sulfur metabolism and in developmental regulation of sulfur metabolite levels. It seems that the homeostasis of sulfur metabolism in trees is more robust than in herbaceous plants and a greater change in conditions is necessary to initiate a response in trees. This view is consistent with the requirement for highly flexible defence strategies in woody plant species as a consequence of longevity. In addition, seasonal growth of perennial plants exerts changes in sulfur metabolite levels and regulation that currently are not understood. In this review, similarities and differences in sulfur metabolite levels, sulfur assimilation and its regulation are characterized and future areas of research are identified.     

What genes make a tree a tree?

Woody growth is evolutionarily ancient, yet has been gained and lost multiple times in plant evolution and is readily enhanced or minimized in eudicot speciation. New molecular genetic and genomic studies in Populus and Arabidopsis that are defining the genes responsible for cambium function and woody growth suggest that the genes regulating woody growth are not unique to woody plants. Surprisingly, key genetic mechanisms originally characterized as regulating the meristematic cells of the shoot apical meristem are also expressed in the vascular cambium during woody growth. This has important implications for the development of Populus as a model species and illustrates why forest trees constitute a contrived group of plants that have more in common with herbaceous relatives than we foresters like to admit.     

Induced somatic sector analysis of cellulose synthase (CesA) promoter regions in woody stem tissues

The increasing focus on plantation forestry as a renewable source of cellulosic biomass has emphasized the need for tools to study the unique biology of woody genera such as Eucalyptus, Populus and Pinus. The domestication of these woody crops is hampered by long generation times, and breeders are now looking to molecular approaches such as marker-assisted breeding and genetic modification to accelerate tree improvement. Much of what is known about genes involved in the growth and development of plants has come from studies of herbaceous models such as Arabidopsis and rice. However, transferring this information to woody plants often proves difficult, especially for genes expressed in woody stems. Here we report the use of induced somatic sector analysis (ISSA) for characterization of promoter expression patterns directly in the stems of Populus and Eucalyptus trees. As a case study, we used previously characterized primary and secondary cell wall-related cellulose synthase (CesA) promoters cloned from Eucalyptus grandis. We show that ISSA can be used to elucidate the phloem and xylem expression patterns of the CesA genes in Eucalyptus and Populus stems and also show that the staining patterns differ in Eucalyptus and Populus stems. These findings show that ISSA is an efficient approach to investigate promoter function in the developmental context of woody plant tissues and raise questions about the suitability of heterologous promoters for genetic manipulation in plant species.     

Population structure and succession in temperate forests of southwestern Japan

In the temperate forests of southwestern Japan, the population density of woody plants in the community increases in the early stage of secondary succession, reaches a peak in the old oak-chestnut forest, and decreases towards the climax beech forest. The species richness and diversity of woody plants also show a trend similar to that of the population density. The canopy-tree population decreases in the course of the succession while the basal area increases, showing a self-thinning process. The species richness, diversity and population density of herbaceous plants are much influenced by the dominance of the bamboo, Sasa palmata. The life-history traits of trees, lower trees and shrubs are discussed in relation to their shoot system, reproductive pattern and successional processes.     

Pines as Model Gymnosperms To Study Evolution, Wood Formation, and Perennial Growth

Pines provide a model system for the gymnosperms, an old and successful group of vascular plants that last shared a common ancestor with the angiosperms about 285 million years ago. Gymnosperms are distinct from angiosperms in their reproduction, development, metabolism, adaptations, and evolution. Pines cover vast areas of the globe, are one of the most important genera of forest trees, dominate the ecology of many temperate and subtropical forest ecosystems, and provide a major fraction of the world's wood. Here, we summarize many features of pine that make it a useful model for gymnosperms and woody plants. We also describe the influence of its reproductive system on methods for genetic analysis and the prospects for genomic studies and genetic engineering. Pines are limited as model systems by their long generation times, large size, large genomes, and the long time from fertilization to seed set.     

Genetic Modification of Herbaceous Plants for Feed and Fuel

Referee: Dr. E. Charles Brummer, Forage Breeding and Genetics, 1204 Agromonomy, Iowa State University, Ames, IA 50011 Much of the research on the genetic modification of herbaceous plant cell walls has been conducted to improve the utilization of forages by ruminant livestock. The rumen of these animals is basically an anaerobic fermentation vat in which the micro flora break down the complex polysaccharides of plant cell walls into simpler compounds that can be further digested and absorbed by the mammalian digestive system. Research on improving the forage digestibility of switchgrass, Panicum virgatum L., and other herbaceous species has demonstrated that genetic improvements can be made in forage quality that can have significant economic value. To meet future energy needs, herbaceous biomass will need to be converted into a liquid fuel, probably ethanol, via conversion technologies still under development. If feedstock quality can be genetically improved, the economics and efficiency of the conversion processes could be significantly enhanced. Improving an agricultural product for improved end product use via genetic modification requires knowledge of desired quality attributes, the relative economic value of the quality parameters in relation to yield, genetic variation for the desired traits, or for molecular breeding, knowledge of genes to suppress or add, and knowledge of any associated negative consequences of genetic manipulation. Because conversion technology is still under development, desirable plant feedstock characteristics have not been completely delineated. Some traits such as cellulose and lignin concentration will undoubtably be important. Once traits that affect biomass feedstock conversion are identified, it will be highly feasible to genetically modify the feedstock quality of herbaceous plants using both conventional and molecular breeding techniques. The use of molecular markers and transformation technology will greatly enhance the capability of breeders to modify the morphologic structure and cell walls of herbaceous species. It will be necessary to monitor gene flow to remnant wild populations of biomass plants and have strategies available to curtail gene flow if it becomes a potential problem. It will also be necessary to monitor plant survival and long-term productivity as affected by these genetic changes to herbaceous species.     

Populus: arabidopsis for forestry. Do we need a model tree?

Trees are used to produce a variety of wood-based products including timber, pulp and paper. More recently, their use as a source of renewable energy has also been highlighted, as has their value for carbon mitigation within the Kyoto Protocol. Relative to food crops, the domestication of trees has only just begun; the long generation time and complex nature of juvenile and mature growth forms are contributory factors. To accelerate domestication, and to understand further some of the unique processes that occur in woody plants such as dormancy and secondary wood formation, a 'model' tree is needed. Here it is argued that Populus is rapidly becoming accepted as the 'model' woody plant and that such a 'model' tree is necessary to complement the genetic resource being developed in arabidopsis. The genus Populus (poplars, cottonwoods and aspens) contains approx. 30 species of woody plant, all found in the Northern hemisphere and exhibiting some of the fastest growth rates observed in temperate trees. Populus is fulfilling the 'model' role for a number of reasons. First, and most important, is the very recent commitment to sequence the Populus genome, a project initiated in February 2002. This will be the first woody plant to be sequenced. Other reasons include the relatively small genome size (450-550 Mbp) of Populus, the large number of molecular genetic maps and the ease of genetic transformation. Populus may also be propagated vegetatively, making mapping populations immortal and facilitating the production of large amounts of clonal material for experimentation. Hybridization occurs routinely and, in these respects, Populus has many similarities to arabidopsis. However, Populus also differs from arabidopsis in many respects, including being dioecious, which makes selfing and back-cross manipulations impossible. The long time-to-flower is also a limitation, whilst physiological and biochemical experiments are more readily conducted in Populus compared with the small-statured arabidopsis. Recent advances in the development of large expressed sequence tagged collections, microarray analysis and the free distribution of mapping pedigrees for quantitative trait loci analysis secure Populus as the ideal subject for further exploitation by a wide range of scientists including breeders, physiologists, biochemists and molecular biologists. In addition, and in contrast to other model plants, the genus Populus also has genuine commercial value as a tree for timber, plywood, pulp and paper.     

Fine Root Distribution in Dehesas of Central-Western Spain

A Dehesa is a structurally complex agro-silvo-pastoral system where at least two strata of vegetation, trees and herbaceous plants coexist. We studied the root distribution of trees (Quercus ilex L.) and herbaceous plants, in order to evaluate tree and crops competition and complementarity in Dehesas of Central Western Spain. 72 soil cores of 10 cm diameter (one to two metre deep) were taken out around 13 trees. Seven trees were intercropped with Avena sativa L. and six trees were in a grazed pasture dominated by native grasses. Soil coring was performed at four distances from the tree trunks, from 2.5 (beneath canopy) till 20 m (out of the canopy). Root length density (RLD) of herbaceous plants and trees was measured using the soil core-break method. Additionally, we mapped tree roots in 51 profiles of 7 recently opened road cuts, located between 4 and 26 m of distance from the nearest tree. The depth of the road cuts varied between 2.5 and 5.5 m. Herbaceous plant roots were located mostly in the upper 30 cm, above a clayey, dense soil layer. RLD of herbaceous plants decreased exponentially with depth until 100 cm depth. Holm-oak showed a much lower RLD than herbs (on average, 2.4 versus 23.7 km m⁻³, respectively, in the first 10 cm of the soil depth). Tree RLD was surprisingly almost uniform with depth and distance to trees. We estimated a 5.2 m maximum depth and a 33 m maximum horizontal extension for tree roots. The huge surface of soil explored by tree roots (even 7 times the projection of the canopy) could allow trees to meet their water needs during the dry Mediterranean summers. The limited vertical overlap of the two root profiles suggests that competition for soil resources between trees and the herbaceous understorey in the Dehesa is probably not as strong as usually assumed.     

Drought effect on plant biomass allocation: A meta‐analysis

Drought is one of the abiotic stresses controlling plant function and ecological stability. In the context of climate change, drought is predicted to occur more frequently in the future. Despite numerous attempts to clarify the overall effects of drought stress on the growth and physiological processes of plants, a comprehensive evaluation on the impacts of drought stress on biomass allocation, especially on reproductive tissues, remains elusive. We conducted a meta‐analysis by synthesizing 164 published studies to elucidate patterns of plant biomass allocation in relation to drought stress. Results showed that drought significantly increased the fraction of root mass but decreased that of stem, leaf, and reproductive mass. Roots of herbaceous plants were more sensitive to drought than woody plants that reduced reproductive allocation more sharply than the former. Relative to herbaceous plants, drought had a more negative impact on leaf mass fraction of woody plants. Among the herbaceous plants, roots of annuals responded to drought stress more strongly than perennial herbs, but their reproductive allocation was less sensitive to drought than the perennial herbs. In addition, cultivated and wild plants seemed to respond to drought stress in a similar way. Drought stress did not change the scaling exponents of the allometric relationship between different plant tissues. These findings suggest that the allometric partitioning theory, rather than the optimal partitioning theory, better explains the drought‐induced changes in biomass allocation strategies.     

Molekulare Studien an Ameisenbäumen

Molecular systematic studies in Southeast Asian ant‐plants Myrmecophytes are plants that are permanently inhabited by ants. They provide nesting space and feed their partners, whereas the ants protect their hosts from herbivores and competitors such as climbers and lianas. The manifold relationships between tropical pioneer trees of the genus Macaranga and their partner ants of the genus Crematogaster constitute the most important and species‐rich mutualistic ant‐plant relationship of the Paleotropics. We use comparative DNA sequencing and molecular marker technologies to evaluate phylogenetic relationships among the about 30 myrmecophytic Macaranga species as well as their co‐evolution with ants. We also study the population genetics and historical biogeography of particular Macaranga species groups. Patterns of genetic diversity and differentiation in these pioneer tree species show interesting correlations with their reproductive biology and with characteristics of the increasingly fragmented pioneer habitats in the rainforests of Sundaland.     

植物根构型特性与磷吸收效率

植物根构型,即根系在生长介质中的空间造型和分布,与磷吸收效率密切相关;认识植物根构型,可为植物磷效率的遗传改良提供依据。长期以来,人们试图定量描述植物根构型,确立一个能客观全面地描述根系三维立体构型的综合指标。试验指出,植物主要通过向地性变化和根冠之间的碳源分配来改变根构型,从而影响磷吸收效率;根系向地性变化可由缺磷等因素所诱导,且存在着一定的遗传变异性。有证据表明,根构型对低磷胁迫的适应性变化是     

植物根构型特性与磷吸收效率

植物根构型，即根系在生长介质中的空间造型和分布，与磷吸收效率密切相关；认识植物根构型，可为植物磷效率的遗传改良提供依据。长期以来，人们试图定量描述植物根构型，确立一个能客观全面地描述根系三维立体构型的综合指标。试验指出，植物主要通过向地性变化和根冠之间的碳源分配来改变根构型, 从而影响磷吸收效率；根系向地性变化可由缺磷等因素所诱导，且存在着一定的遗传变异性。有证据表明，根构型对低磷胁迫的适应性变化是受基因调控的一个生理过程，其中乙烯可能是一种重要的生理调节物质。迄今已在一些植物上定位到了部分控制根构型的数量性状座位，为该性状的分子生物学改良提供了基础。随着现代技术的进展，植物根构型研究将取得更大的突破。