A global relationship between the heterotrophic and autotrophic components of soil respiration?

Soil surface CO₂ flux (R_S) is overwhelmingly the product of respiration by roots (autotrophic respiration, R_A) and soil organisms (heterotrophic respiration, R_H). Many studies have attempted to partition R_S into these two components, with highly variable results. This study analyzes published data encompassing 54 forest sites and shows that R_A and R_H are each strongly (R²>0.8) correlated to annual R_S across a wide range of forest ecosystems. Monte Carlo simulation showed that these correlations were significantly stronger than any correlation introduced as an artefact of measurement method. Biome type, measurement method, mean annual temperature, soil drainage, and leaf habit were not significant. For sites with available data, there was a significant (R²=0.56) correlation between total detritus input and R_H, while R_A was unrelated to net primary production. We discuss why R_A and R_H might be related to each other on large scales, as both ultimately depend on forest carbon balance and photosynthate supply. Limited data suggest that these or similar relationships have broad applicability in other ecosystem types. Site‐specific measurements are always more desirable than the application of inferred broad relationships, but belowground measurements are difficult and expensive, while measuring R_S is straightforward and commonly done. Thus the relationships presented here provide a useful method that can help constrain estimates of terrestrial carbon budgets.     

Mixed leaf litter effects on decomposition rates and soil microarthropod communities in an oak–pine stand in Japan

Rates of decomposition, and soil faunal abundance and diversity associated with single-species and mixed-species litters were studied in a litter bag experiment in an oak–pine forest. We used two canopy species of leaf litter, pine and oak, and one shrub species, Sasa, and compared decomposition rates, and soil microarthropod abundance and community structure of oribatid mites in the litter bags. Mass loss of single species decreased in the order: oak > pine > Sasa. While the total mass loss rates of mixed litter were intermediate between those of the constituent species, enhancement of mass loss from the three-species mixture and from mixed slow-decomposing litters (pine and Sasa) was observed. Faunal abundance in litter bags was higher in mixed-species litter than in those with single-species litter, and species richness of oribatid mites was also higher in the three-species mixed litter. Faunal abundance in single-species litter bags was not correlated with mass loss, although enhancement of mass loss in mixed litter bags corresponded with higher microarthropod abundance. Habitat heterogeneity in mixed litter bags seemed to be responsible for the more abundant soil microarthropod community.     

Spatial and temporal variation in assemblage structure of fish larvae in mediterranean–type streams: contrasts between native and non-native species

Larval fish ecology remains poorly understood in freshwater ecosystems. This study analysed the larval ecology of native and non-native fishes in a mediterranean-type watershed in Southern Iberian Peninsula. Assemblage structure of fish larvae was quantified at four distinct rivers sites, every 2 weeks between March and October 2004, and analysed against 16 variables reflecting river flow, temperature and habitat context. There was considerable spatial variation in taxonomic richness and abundance of larval assemblages, with either native or non-native fishes dominating in different sites. There was also a clear temporal separation between native and non-native fishes, with native cyprinids generally peaking earlier in the year than non-native fishes. Temporal fluctuations in larval assemblages across sites were mostly associated with variations in water temperature and transparency, but flow was an important factor shaping local assemblage structure. Larvae of native fishes appeared to found most suitable conditions in naturally flowing sites early in spring, when flow is high and water temperature stills low. These results suggest that preservation of natural flow peaks and adequate thermal contexts may be crucial for conservation of native fish fauna in mediterranean-type streams.     

Highly enantioselective oxidation of phenyl methyl sulfide and its derivatives into optically pure (S)-sulfoxides with Rhodococcus sp. CCZU10-1 in an n-octane–water biphasic system

Enantiopure sulfoxides can be prepared via the asymmetric oxidation of sulfides using sulfide monooxygenases. The n-octane–water biphasic system was chosen for the bio-oxidation of a water-insoluble phenyl methyl sulfide (PMS) by Rhodococcus sp. CCZU10-1. In this n-octane–water system, the optimum reaction conditions were obtained. (S)-phenyl methyl sulfoxide ((S)-PMSO) with >99.9 % enantiomeric excess formed at 55.3 mM in the n-octane–water biphasic system. Using fed-batch method, a total of 118 mM (S)-PMSO accumulated in 1-L reaction mixture after the 7th feed, and no (R)-PMSO and sulfone were detected. Moreover, Rhodococcus sp. CCZU10-1 displayed fairly good activity and enantioselectivity toward other sulfides. In conclusion, Rhodococcus sp. CCZU10-1 is a promising biocatalyst for synthesizing highly optically active sulfoxides.