Sedimentation and breakdown kinetics of organic matter in the anaerobic zone of Lake Vechten

The turnover and exchange rates, as well as the sedimentation rates concerning the input and output of carbon in the anaerobic hypolimnion and the sediment in Lake Vechten were studied. The carbon input data were derived from those on sedimentation. By comparison of C-fixation data, sedimentation rates measurements and microbial reduction rates of observed fluxes of electron acceptors a mineralization of 20–30% of the limnetic C-fixation was found in the hypolimnion. The rate-limiting step of methanogenesis in anaerobic mineralization is the breakdown of algal cell wall components to their main product, namely acetate. This intermediate has a relatively fast turnover rate to the end-products, namely the gases CH₄ and CO₂. Finally, from the data on the diffusion of low-molecular weight metabolic intermediates and on the rates of formation of CH₄ and CO₂ the output of carbon and its cycling in Lake Vechten are discussed.     

Mineralization rates of peat from eroding peat islands in reservoirs

Reservoirs are sources of greenhouses gases to the atmosphere, primarily due to organic carbon mineralization in flooded plants and soils to carbon dioxide (CO₂) and methane (CH₄). Floating peat islands are common in reservoirs that inundated peatlands. These islands can decompose on mass, or small pieces of peat can erode from islands to decompose in the water column or on the bottom of reservoirs. Here we used large 450 liter sealed enclosures to measure mineralization rates of small peat pieces and larger peat blocks collected from floating peat islands. Mineralization rates were calculated by quantifying dissolved inorganic carbon (DIC), CO₂ and CH₄ accumulation within the water and headspace of the enclosures over time. We found that peat did decompose under water, but rates of mineralization of peat pieces were not different than rates of mineralization of larger peat blocks. Mineralization rates ranged between 59 and l40 g C g^–1 d^–1. Peat pieces acidified the water, shifting the bicarbonate equilibrium to almost exclusively dissolved CO₂, which was then readily able to flux to the atmosphere. We estimated that 2.4–5.6% of peat carbon was mineralized annually, suggesting that fluxes of CO₂ and CH₄ from reservoirs that flood peatlands could last at minimum 18–42 years from this carbon source alone.     

Carbon Dioxide and Methane Production in Small Reservoirs Flooding Upland Boreal Forest

The FLooded Uplands Dynamics EXperiment (FLUDEX) was designed to assess the impact of reservoir creation on carbon cycling in boreal forests by (a) determining whether production of the greenhouse gases (GHG) carbon dioxide (CO₂) and methane (CH₄) in reservoirs is related to the amount of organic carbon (OC) stored in the flooded landscape, (b) examining temporal trends in GHG production during initial stages of flooding, and (c) considering the net difference between GHG fluxes before and after flooding to estimate the true effect of reservoir creation on atmospheric GHG levels. Three forested sites that varied in the amount of OC stored in soils and vegetation (30,870–45,860 kg C ha^–1) were experimentally flooded from June to September in 1999–2001. Throughout the study, net CO₂ and CH₄ production in all three reservoirs was not related to overall site OC storage. During the 1st flooding season, net CO₂ production in the three reservoirs was 703–797 kg C ha^–1, but it decreased during the 2nd and 3rd flooding seasons to between 408 and 479 kg C ha^–1. However, CH₄ production increased in all reservoirs with each flooding season, from about 3.2–4.6 kg C ha^–1 in 1999 to 12.8–24.9 kg C ha^–1 in 2000 and 29.7–35.2 kg C ha^–1 in 2001. Over the long term, effects of boreal reservoir creation on atmospheric GHG levels may be largely due to net changes in CH₄ cycling between the undisturbed and flooded ecosystems.     

Rate of warming affects temperature sensitivity of anaerobic peat decomposition and greenhouse gas production

Temperature sensitivity of anaerobic carbon mineralization in wetlands remains poorly represented in most climate models and is especially unconstrained for warmer subtropical and tropical systems which account for a large proportion of global methane emissions. Several studies of experimental warming have documented thermal acclimation of soil respiration involving adjustments in microbial physiology or carbon use efficiency (CUE), with an initial decline in CUE with warming followed by a partial recovery in CUE at a later stage. The variable CUE implies that the rate of warming may impact microbial acclimation and the rate of carbon‐dioxide (CO₂) and methane (CH₄) production. Here, we assessed the effects of warming rate on the decomposition of subtropical peats, by applying either a large single‐step (10°C within a day) or a slow ramping (0.1°C/day for 100 days) temperature increase. The extent of thermal acclimation was tested by monitoring CO₂ and CH₄ production, CUE, and microbial biomass. Total gaseous C loss, CUE, and MBC were greater in the slow (ramp) warming treatment. However, greater values of CH₄–C:CO₂–C ratios lead to a greater global warming potential in the fast (step) warming treatment. The effect of gradual warming on decomposition was more pronounced in recalcitrant and nutrient‐limited soils. Stable carbon isotopes of CH₄ and CO₂ further indicated the possibility of different carbon processing pathways under the contrasting warming rates. Different responses in fast vs. slow warming treatment combined with different endpoints may indicate alternate pathways with long‐term consequences. Incorporations of experimental results into organic matter decomposition models suggest that parameter uncertainties in CUE and CH₄–C:CO₂–C ratios have a larger impact on long‐term soil organic carbon and global warming potential than uncertainty in model structure, and shows that particular rates of warming are central to understand the response of wetland soils to global climate change.     

Role of lakes for organic carbon cycling in the boreal zone

We calculated the carbon loss (mineralization plus sedimentation) and net CO₂ escape to the atmosphere for 79 536 lakes and total running water in 21 major Scandinavian catchments (size range 437–48 263 km²). Between 30% and 80% of the total organic carbon that entered the freshwater ecosystems was lost in lakes. Mineralization in lakes and subsequent CO₂ emission to the atmosphere was by far the most important carbon loss process. The withdrawal capacity of lakes on the catchment scale was closely correlated to the mean residence time of surface water in the catchment, and to some extent to the annual mean temperature represented by latitude. This result implies that variation of the hydrology can be a more important determinant of CO₂ emission from lakes than temperature fluctuations. Mineralization of terrestrially derived organic carbon in lakes is an important regulator of organic carbon export to the sea and may affect the net exchange of CO₂ between the atmosphere and the boreal landscape.     

Progress in the studies on the greenhouse gas emissions from reservoirs

The green credentials of hydroelectricity in terms of greenhouse-gas (GHG) emissions have been tarnished with the finding of the researches on GHG emissions from hydroelectric reservoirs in the last two decades. Substantial amounts of GHGs release from the tropical reservoirs, especially methane (CH₄) from Brazil’s Amazonian areas. CH₄ contributes strongly to climate change because it has a global warming potential (GWP) 24 times higher than carbon dioxide (CO₂) on a per molecule basis over a 100-year time horizon. GHGs may emit from reservoirs through four different pathways to the atmosphere: (1) diffusive flux at the reservoir surface, (2) gas bubble flux in the shallow zones of a reservoir, (3) water degassing flux at the outlet of the powerhouse downstream of turbines and spillways, and (4) flux across the air–water interface in the rivers downstream of the dams. This paper reviewed the productions and emissions of CH₄, CO₂, and N₂O in reservoirs, and the environmental variables influencing CH₄ and CO₂ emissions were also summarized. Moreover, the paper combined with the progress of GHG emissions from Three Gorges Reservoir and proposed three crucial problems to be resolved on GHG emissions from reservoirs at present, which would be benefit to estimate the total GHG emissions from Three Gorges Reservoir accurately.     

Linking forest fires to lake metabolism and carbon dioxide emissions in the boreal region of Northern Québec

Natural fires annually decimate up to 1% of the forested area in the boreal region of Québec, and represent a major structuring force in the region, creating a mosaic of watersheds characterized by large variations in vegetation structure and composition. Here, we investigate the possible connections between this fire‐induced watershed heterogeneity and lake metabolism and CO₂ dynamics. Plankton respiration, and water–air CO₂ fluxes were measured in the epilimnia of 50 lakes, selected to lie within distinct watershed types in terms of postfire terrestrial succession in the boreal region of Northern Québec. Plankton respiration varied widely among lakes (from 21 to 211 μg C L^?1 day^?1), was negatively related to lake area, and positively related to dissolved organic carbon (DOC). All lakes were supersaturated in CO₂ and the resulting carbon (C) flux to the atmosphere (150 to over 3000 mg C m² day^?1) was negatively related to lake area and positively to DOC concentration. CO₂ fluxes were positively related to integrated water column respiration, suggesting a biological component in this flux. Both respiration and CO₂ fluxes were strongly negatively related to years after the last fire in the basin, such that lakes in recently burnt basins had significantly higher C emissions, even after the influence of lake size was removed. No significant differences were found in nutrients, chlorophyll, and DOC between lakes in different basin types, suggesting that the fire‐induced watershed features influence other, more subtle aspects, such as the quality of the organic C reaching lakes. The fire‐induced enhancement of lake organic C mineralization and C emissions represents a long‐term impact that increases the overall C loss from the landscape as the result of fire, but which has never been included in current regional C budgets and future projections. The need to account for this additional fire‐induced C loss becomes critical in the face of predictions of increasing incidence of fire in the circumboreal landscape.     

Punching above their weight: Large release of greenhouse gases from small agricultural dams

Freshwater ecosystems play a major role in global carbon cycling through the breakdown of organic material and release of greenhouse gases (GHGs). Carbon dioxide (CO₂) and methane (CH₄) emissions from lakes, wetlands, reservoirs and small natural ponds have been well studied, however, the GHG emissions of highly abundant, small‐scale (<0.01 km²) agricultural dams (small stream and run‐off impoundments) are still unknown. Here, we measured the diffusive CO₂ and CH₄ flux of 77 small agricultural dams within south‐east Australia. The GHG emissions from these waterbodies, which are currently unaccounted for in GHG inventories, amounted to 11.12 ± 2.59 g CO₂‐equivalent m²/day, a value 3.43 times higher than temperate reservoir emissions. Upscaling these results to the entire state of Victoria, Australia, resulted in a farm dam CO₂‐equivalent/day emission rate of 4,853 tons, 3.1 times higher than state‐wide reservoir emissions in spite of farm dams covering only 0.94 times the comparative area. We also show that CO₂ and CH₄ emission rates were both significantly positively correlated with dissolved nitrate concentrations, and significantly higher in livestock rearing farm dams when compared to cropping farm dams. The results from this study demonstrate that small agricultural farm dams can be a major source of greenhouse gas emissions, thereby justifying their inclusion in global carbon budgets.     

The carbon cycle of Quebec boreal reservoirs investigated by elemental compositions and isotopic values

Dissolved and particulate organic matter (POM) of three Quebec boreal reservoirs of different ages (Laforge-1, 7 years; Robert-Bourassa, 25 years and Cabonga, 70 years at the time of sampling) and sets of lakes from the same watersheds was analyzed using organic carbon concentrations, C/N and C/P elemental composition, δ¹³C and δ¹⁵N isotopic values. The reservoirs are characterized by lower dissolved organic carbon concentrations with lower C/N ratios and by lower δ¹³C and higher δ¹⁵N in POM. They contain more autochthonous dissolved organic matter and less terrigenous organic matter than the lakes. Some of those characteristics are more pronounced in the younger than in the older reservoirs. The differences can be attributed to two causes: (1) more extended degradation of terrigenous organic matter, caused by an increase in residence time; and (2) differences in food web structure resulting from the phenomenon known as trophic upsurge, in newly flooded reservoirs. The results indicate that some effects of reservoir creation on the carbon cycle are short term perturbations, others however long term features of those reservoirs. The implications of these findings for CO₂ emissions from reservoirs are discussed.     

Biogeochemistry of organic carbon, CO2, CH4, and trace elements in thermokarst water bodies in discontinuous permafrost zones of Western Siberia

Active processes of permafrost thaw in Western Siberia increase the number of soil subsidencies, thermokarst lakes and thaw ponds. In continuous permafrost zones, this process promotes soil carbon mobilisation to water reservoirs, as well as organic matter (OM) biodegradation, which produces a permanent flux of carbon dioxide (CO₂) to the atmosphere. At the same time, the biogeochemical evolution of aquatic ecosystems situated in the transition zone between continuous permafrost and permafrost-free terrain remains poorly known. In order to better understand the biogeochemical processes that occur in thaw ponds and lakes located in discontinuous permafrost zones, we studied ~30 small (1–100,000 m²) shallow (<1 m depth) lakes and ponds formed as a result of permafrost subsidence and thaw of the palsa bog located in the transition zone between the tundra and forest-tundra (central part of Western Siberia). There is a significant increase in dissolved CO₂ and methane (CH₄) concentration with decreasing water body surface area, with the largest supersaturation with respect to atmospheric CO₂ and CH₄ in small (<100 m²) permafrost depressions filled with thaw water. Dissolved organic carbon (DOC), conductivity, and metal concentrations also progressively increase from large lakes to thaw ponds and depressions. As such, small water bodies with surface areas of 1–100 m² that are not accounted for in the existing lake and pond databases may significantly contribute to CO₂ and CH₄ fluxes to the atmosphere, as well as to the stocks of dissolved trace elements and organic carbon. In situ lake water incubation experiments yielded negligible primary productivity but significant oxygen consumption linked to the mineralisation rate of dissolved OM by heterotrophic bacterioplankton, which produce a net CO₂ flux to the atmosphere of 5 ± 2.5 mol C m² year^?1. The most significant result of this study, which has long-term consequences on our prediction of aquatic ecosystem development in the course of permafrost degradation is CO₂, CH₄, and DOC concentrations increase with decreasing lake age and size. As a consequence, upon future permafrost thaw, the increase in the number of small water bodies, accompanied by the drainage of large thermokarst lakes to the hydrological network, will likely favour (i) the increase of DOC and colloidal metal stocks in surface aquatic systems, and (ii) the enhancement of CO₂ and CH₄ fluxes from the water surface to the atmosphere. According to a conservative estimation that considers that the total area occupied by water bodies in Western Siberia will not change, this increase in stocks and fluxes could be as high as a factor of ten.     

The rate of permafrost carbon release under aerobic and anaerobic conditions and its potential effects on climate

Recent observations suggest that permafrost thaw may create two completely different soil environments: aerobic in relatively well‐drained uplands and anaerobic in poorly drained wetlands. The soil oxygen availability will dictate the rate of permafrost carbon release as carbon dioxide (CO₂) and as methane (CH₄), and the overall effects of these emitted greenhouse gases on climate. The objective of this study was to quantify CO₂ and CH₄ release over a 500‐day period from permafrost soil under aerobic and anaerobic conditions in the laboratory and to compare the potential effects of these emissions on future climate by estimating their relative climate forcing. We used permafrost soils collected from Alaska and Siberia with varying organic matter characteristics and simultaneously incubated them under aerobic and anaerobic conditions to determine rates of CO₂ and CH₄ production. Over 500 days of soil incubation at 15 °C, we observed that carbon released under aerobic conditions was 3.9–10.0 times greater than anaerobic conditions. When scaled by greenhouse warming potential to account for differences between CO₂ and CH₄, relative climate forcing ranged between 1.5 and 7.1. Carbon release in organic soils was nearly 20 times greater than mineral soils on a per gram soil basis, but when compared on a per gram carbon basis, deep permafrost mineral soils showed carbon release rates similar to organic soils for some soil types. This suggests that permafrost carbon may be very labile, but that there are significant differences across soil types depending on the processes that controlled initial permafrost carbon accumulation within a particular landscape. Overall, our study showed that, independent of soil type, permafrost carbon in a relatively aerobic upland ecosystems may have a greater effect on climate when compared with a similar amount of permafrost carbon thawing in an anaerobic environment, despite the release of CH₄ that occurs in anaerobic conditions.     

Predicting long‐term carbon mineralization and trace gas production from thawing permafrost of Northeast Siberia

The currently observed Arctic warming will increase permafrost degradation followed by mineralization of formerly frozen organic matter to carbon dioxide (CO₂) and methane (CH₄). Despite increasing awareness of permafrost carbon vulnerability, the potential long‐term formation of trace gases from thawing permafrost remains unclear. The objective of the current study is to quantify the potential long‐term release of trace gases from permafrost organic matter. Therefore, Holocene and Pleistocene permafrost deposits were sampled in the Lena River Delta, Northeast Siberia. The sampled permafrost contained between 0.6% and 12.4% organic carbon. CO₂ and CH₄ production was measured for 1200 days in aerobic and anaerobic incubations at 4 °C. The derived fluxes were used to estimate parameters of a two pool carbon degradation model. Total CO₂ production was similar in Holocene permafrost (1.3 ± 0.8 mg CO₂‐C gdw^?1 aerobically, 0.25 ± 0.13 mg CO₂‐C gdw^?1 anaerobically) as in 34 000–42 000‐year‐old Pleistocene permafrost (1.6 ± 1.2 mg CO₂‐C gdw^?1 aerobically, 0.26 ± 0.10 mg CO₂‐C gdw^?1 anaerobically). The main predictor for carbon mineralization was the content of organic matter. Anaerobic conditions strongly reduced carbon mineralization since only 25% of aerobically mineralized carbon was released as CO₂ and CH₄ in the absence of oxygen. CH₄ production was low or absent in most of the Pleistocene permafrost and always started after a significant delay. After 1200 days on average 3.1% of initial carbon was mineralized to CO₂ under aerobic conditions while without oxygen 0.55% were released as CO₂ and 0.28% as CH₄. The calibrated carbon degradation model predicted cumulative CO₂ production over a period of 100 years accounting for 15.1% (aerobic) and 1.8% (anaerobic) of initial organic carbon, which is significantly less than recent estimates. The multiyear time series from the incubation experiments helps to more reliably constrain projections of future trace gas fluxes from thawing permafrost landscapes.     

Release of CO2 and CH4 from lakes and drainage ditches in temperate wetlands

Shallow fresh water bodies in peat areas are important contributors to greenhouse gas fluxes to the atmosphere. In this study we determined the magnitude of CH₄ and CO₂ fluxes from 12 water bodies in Dutch wetlands during the summer season and studied the factors that might regulate emissions of CH₄ and CO₂ from these lakes and ditches. The lakes and ditches acted as CO₂ and CH₄ sources of emissions to the atmosphere; the fluxes from the ditches were significantly larger than the fluxes from the lakes. The mean greenhouse gas flux from ditches and lakes amounted to 129.1 ± 8.2 (mean ± SE) and 61.5 ± 7.1 mg m^?2 h^?1 for CO₂ and 33.7 ± 9.3 and 3.9 ± 1.6 mg m^?2 h^?1 for CH₄, respectively. In most water bodies CH₄ was the dominant greenhouse gas in terms of warming potential. Trophic status of the water and the sediment was an important factor regulating emissions. By using multiple linear regression 87% of the variation in CH₄ could be explained by PO₄ ^3? concentration in the sediment and Fe²⁺ concentration in the water, and 89% of the CO₂ flux could be explained by depth, EC and pH of the water. Decreasing the nutrient loads and input of organic substrates to ditches and lakes by for example reducing application of fertilizers and manure within the catchments and decreasing upward seepage of nutrient rich water from the surrounding area will likely reduce summer emissions of CO₂ and CH₄ from these water bodies.     

Geosphere-Biosphere Interactions in Bio-Activity Volcanic Lakes: Evidences from Hule and Rìo Cuarto (Costa Rica)

Hule and Río Cuarto are maar lakes located 11 and 18 km N of Poás volcano along a 27 km long fracture zone, in the Central Volcanic Range of Costa Rica. Both lakes are characterized by a stable thermic and chemical stratification and recently they were affected by fish killing events likely related to the uprising of deep anoxic waters to the surface caused by rollover phenomena. The vertical profiles of temperature, pH, redox potential, chemical and isotopic compositions of water and dissolved gases, as well as prokaryotic diversity estimated by DNA fingerprinting and massive 16S rRNA pyrosequencing along the water column of the two lakes, have highlighted that different bio-geochemical processes occur in these meromictic lakes. Although the two lakes host different bacterial and archaeal phylogenetic groups, water and gas chemistry in both lakes is controlled by the same prokaryotic functions, especially regarding the CO₂-CH₄ cycle. Addition of hydrothermal CO₂ through the bottom of the lakes plays a fundamental priming role in developing a stable water stratification and fuelling anoxic bacterial and archaeal populations. Methanogens and methane oxidizers as well as autotrophic and heterotrophic aerobic bacteria responsible of organic carbon recycling resulted to be stratified with depth and strictly related to the chemical-physical conditions and availability of free oxygen, affecting both the CO₂ and CH₄ chemical concentrations and their isotopic compositions along the water column. Hule and Río Cuarto lakes were demonstrated to contain a CO₂ (CH₄, N₂)-rich gas reservoir mainly controlled by the interactions occurring between geosphere and biosphere. Thus, we introduced the term of bio-activity volcanic lakes to distinguish these lakes, which have analogues worldwide (e.g. Kivu: D.R.C.-Rwanda; Albano, Monticchio and Averno: Italy; Pavin: France) from volcanic lakes only characterized by geogenic CO₂ reservoir such as Nyos and Monoun (Cameroon).     

Dissolved organic and inorganic carbon mass balances in central Ontario lakes

Mass balances of dissolved organic carbon (DOC) and dissolvedinorganic carbon (DIC) based on stream and precipitation inputs andoutflows were measured for seven unproductive lakes in central Ontariobetween 1981 and 1989. Net annual CO₂ evasion occurred in sixof the seven study lakes with minor net invasion in the seventh. Atmosphericinvasion might have been significant at certain times of the year, particularlyduring the growing season. Net evasion rates were greater than DIC loadingrates, indicating partial mineralization of the terrestrially-derived DOC in thelakes. A steady state mass balance model adequately described the variationin DOC retention between lakes. Net annual carbon accumulation of forestcommunities based on estimates of net ecosystem production may beoverestimated because of significant export of carbon to lakes via streamsand groundwater, particularly in catchments with extensive peatlands.     

A modeling approach to assess the greenhouse gas risk in Koteshwar hydropower reservoir,India

Climate changes are likely to be significantly affected by reservoirs/lakes due to emission of greenhouse gas (GHG), change in the magnitude and seasonality of river runoffs and severe extreme events. In this study, a coupled GHG Risk Assessment Tool (GRAT) and Soil Water Assessment Tool (SWAT) are used to predict the GHG risk of Koteshwar reservoirs located in Uttarakhand, India. Before running the GRAT model, SWAT model was used to simulate the runoffs (one of the major input of GRAT). The model was calibrated (2004–09) and validated (2010–13) at Uttarkashi station using monthly discharge data. The model performance was checked by R², NSE, RSR, and p-value as 0.785, 0.60, 0.63, and 0.04, respectively, during calibration and 0.790, 0.66, 0.57, and 0.06 during validation and shows satisfactory model performance on monthly time step. Further, GRAT model is also applied and the results show that Koteshwar reservoir is found to be under high risk of CO₂ (CO₂ > 645 mg m^?2 d^?1) and medium risk of CH₄ (CH₄ < 45 mg m^?2 d^?1) till 2023. Subsequently, the GHG risk is minimized after passage of time over 100 years. These models may be used by the policy-makers to know the potential of GHG and its vulnerability to the reservoirs after the impoundment.     

Controls on Microbial Production of Methane and Carbon Dioxide in Three Sphagnum-Dominated Peatland Ecosystems as Revealed by a Reciprocal Field Peat Transplant Experiment

We examined controls on mineralization of carbon to methane (CH₄) and carbon dioxide (CO₂) in Sphagnum (moss)-dominated peatland ecosystems by transplanting surface (5 cm deep) and subsurface (40 cm deep) peat samples reciprocally among three sites for periods ranging from 4 to 25 months. The sites were Big Run Bog in West Virginia, USA, Bog Lake Bog in Minnesota, USA, and Bog 307 in Ontario, Canada. Immediately upon retrieval, we incubated the peat samples in the laboratory at 12 and 22°C under both anoxic and oxic conditions to estimate rates of carbon mineralization. Transplanting affected surface peat more than subsurface peat. Peat incubated within Bog Lake Bog in Minnesota had the highest rates of CH₄ production, regardless of origin, whereas transplanting did not affect rates of CO₂ production measured concomitantly. Peat that originated in Big Run Bog in West Virginia generally maintained higher rates of CH₄ production and CO₂ production than peat from the other two sites after incubation in the field. The temperature dependence (Q ₁₀) of CH₄ production and CO₂ production varied among transplant sites, but not among peat origins, suggesting physiological adaptations of microbial communities to local environmental conditions. Differences in organic matter quality of the peat, particularly lignin chemistry, helped explain the results: (a) CH₄ production correlated with fresher lignin derived from Carex sedges, and (b) CO₂ production correlated with woody lignin. We concluded that, although both site conditions (climate, nutrient status, and microbial communities) and organic matter quality influence carbon mineralization in peat, interactive effects occur and may differ depending on peat temperature. Moreover, CH₄ production and CO₂ production respond differently to environmental regulators.     

Warming increases the proportion of primary production emitted as methane from freshwater mesocosms

Methane (CH₄) and carbon dioxide (CO₂) are the dominant gaseous end products of the remineralization of organic carbon and also the two largest contributors to the anthropogenic greenhouse effect. We investigated whether warming altered the balance of CH₄ efflux relative to gross primary production (GPP) and ecosystem respiration (ER) in a freshwater mesocosm experiment. Whole ecosystem CH₄ efflux was strongly related to temperature with an apparent activation energy of 0.85 eV. Furthermore, CH₄ efflux increased faster than ER or GPP with temperature, with all three processes having sequentially lower activation energies. Warming of 4 °C increased the fraction of GPP effluxing as CH₄ by 20% and the fraction of ER as CH₄ by 9%, in line with the offset in their respective activation energies. Because CH₄ is 21 times more potent as a greenhouse gas, relative to CO₂, these results suggest freshwater ecosystems could drive a previously unknown positive feedback between warming and the carbon cycle.     

Net Heterotrophy in Small Danish Lakes: A Widespread Feature Over Gradients in Trophic Status and Land Cover

Nineteen small lakes located in open landscapes or deciduous forests in nutrient-rich calcareous moraines in North Zealand, Denmark, were all net heterotrophic having negative net ecosystem production and predominant CO₂ supersaturation and O₂ undersaturation of lake waters. Forest lakes were poorer in nutrients, phytoplankton, and primary production, but richer in dissolved organic matter and CO₂ than open lakes with more light available. The modeled annual balance between gross primary production and community respiration (GPP/R _COM) averaged 0.60 in forest lakes and 0.76 in open lakes and the ratio increased significantly with phosphorus concentration and phytoplankton biomass but decreased with colored dissolved organic matter. The negative daily rates of ecosystem production resembled estimates of oxygen uptake from the atmosphere to the lakes, whereas estimates of CO₂ emission were 7.2-fold higher. Although CO₂-rich groundwater and anaerobic respiration support greater molar release of CO₂ than uptake of O₂, we suggest CO₂ emission is overestimated. Possible explanations include CO₂ enrichment of the air film above small wind-sheltered lakes. The observed metabolism and gas exchange show that exogenous organic matter is an important supplementary energy source to community respiration in these small lakes and that forest lakes, in addition, experience pronounced light attenuation from trees and dissolved colored organic matter constraining primary production. Kaj Sand-Jensen (KSJ) formulated the original research idea and designed the study. Data analysis (ie. calculations, statistics and figures) was performed by Peter A. Staehr (PAS). The text was for the most part written by KSJ, although with contributions by PAS, especially in describing the applied methods and data analysis.     

CO2 assimilation strategies in stratified lakes: Diversity and distribution patterns of chemolithoautotrophs

While mechanisms of different carbon dioxide (CO₂) assimilation pathways in chemolithoautotrohic prokaryotes are well understood for many isolates under laboratory conditions, the ecological significance of diverse CO₂ fixation strategies in the environment is mostly unexplored. Six stratified freshwater lakes were chosen to study the distribution and diversity of the Calvin‐Benson‐Bassham (CBB) cycle, the reductive tricarboxylic acid (rTCA) cycle, and the recently discovered archaeal 3‐hydroxypropionate/4‐hydroxybutyrate (HP/HB) pathway. Eleven primer sets were used to amplify and sequence genes coding for selected key enzymes in the three pathways. Whereas the CBB pathway with different forms of RubisCO (IA, IC and II) was ubiquitous and related to diverse bacterial taxa, encompassing a wide range of potential physiologies, the rTCA cycle in Epsilonproteobacteria and Chloribi was exclusively detected in anoxic water layers. Nitrifiying Nitrosospira and Thaumarchaeota, using the rTCA and HP/HB cycle respectively, are important residents in the aphotic and (micro‐)oxic zone of deep lakes. Both taxa were of minor importance in surface waters and in smaller lakes characterized by an anoxic hypolimnion. Overall, this study provides a first insight on how different CO₂ fixation strategies and chemical gradients in lakes are associated to the distribution of chemoautotrophic prokaryotes with different functional traits.