Upper cretaceous rudist and stromatoporid associations of Central Oman (Arabian Peninsula)

Summary Rudist and stromatoporid associations of the Campanian from Central Oman are nearly monospecific. They are dominated byDurania aff.nicholasi, Vaccinites vesiculosus, Torreites milanovici or phaceloid and massive stromatoporids. Several other rudist genera play a secondary role. The thickness of the associations is rarely more than one metre. Solitary corals do not occur in the associations. Colonial corals are less common, although they are up to 1 m high and show considerable diversity. There are no binders. The reef structure indicates variable hydrodynamic conditions. They are always associated with very shallow water. The pureDurania aff.nicholasi patches with large colonial corals andTorreites milanovici are presumably the most rigid structures. The near monospecific associations ofVaccinites vesiculosus are widely distributed. Although mostly preserved in situ, strong currents, presumably caused by tropical storms, have repeatedly impaired and interrupted growth. The specific growth characteristics of the shell of some rudists, especially the radiolitids, enable an estimation of the individual lifespan. Frameworks of approximately 1 metre thickness probably developed in ±100 years. The sediments of the complete sections are predominantly bioclastic.     

Compostional variations and patterns of condont reworking in Late Devonian and early carboniferous calciturbidites (Moravia, Czech Republic)

Summary Compositional variations and grain-size properties of both carbonate constituents and conodonts as an alternative component group were used for interpreting the processes governing the deposition of upper Famennian and middle Tournaisian calciturbidites in Moravia, Czech Republic. Both the composition and grain-size properties of conodont element associations showed to be markedly dependant on facies type of their host sediment. Upper Devonian calciturbidite successions deposited on flanks of wide, Moravian-Silesian carbonate platform are composed mainly of echinoderm-and peloid-rich wacke/packstones and intraclastic float/rudstones (fine-grained calciturbidites, “normal” calciturbidites with Tab Bouma sequences, debris-flow breccias) with abundance of shelf-and shelf margin conodont taxa and epipelagic and “mesopelagic” conodonts. Upper Devonian calciturbidites deposited on slopes of volcanic sea-mounts are composed of echinoderm-and peloid-rich wacke/packstones and float/rudstones with increased proportion of intraclasts and volcanigenic lithoclasts (fine-grained calciturbidites, normal calciturbidites), yeilding abundant conodont associations with higher proportion of “mesopelagic” taxa compared to the platform-flank examples. Middle Tournaisian calciturbidite succession composed of crinoid-, peloid-, intraclast-and lithoclast-rich lime mudstones, wacke/packstones and float/rudstones (normal calciturbidites and debris-flow breccias) yielded conodont element associations rich in shelt-and shelf-margin taxa, “mesopelagic” conodonts and reworked Middle-and Upper Devonian conodonts. In general, the ratio of shelf-and shelf margin conodont taxa to “mesopelagic” taxa is distinctly lower in finegrained calciturbidites than it is in normal calciturbidites and debris-flow breccias. Grain-size properties (mean grain size and sorting) and percentage of fragmented conodont elements, too, are markedly dependant on the facies type: in fine-grained calciturbidites the values of mean grain-size and fragmentation are low and the sorting is good to very good whereas in normal calciturbidites and debris-flow breccias the values of mean grain-size and fragmentation are distinctly higher and the sorting is poorer. The interdependence of facies type and composition and grain-size properties of conodont element associations in gravity-flow deposits is explained as resultant from hydrodynamic sorting during turbidity current flow and final deposition of the bed. Compositional variations observed in our sections may thus be attributed to facies variability (coarsening-and thickening-upward trends) rather than to sea-level fluctuations (highstand shedding of carbonate platforms). On the other hand, significant enrichment in reworked conodont taxa in middle Tournaisian normal calciturbidites compared to scarcity and/or absence of such conodonts in essentially identical facies of upper Famennian age indicate sea-level to be the major control governing such compositional variations, with low relative sea-level stand in middle Tournaisian and high relative sea-level stand in upper Famennian. Thorough analysis of conodont evolution, palaeoecology and taphonomy, with emphasis on understanding the processes of deposition of their host rock, are recommended for any biostratigraphic and biofacies study to be done in carbonate sediments deposited under strong hydrodynamic regimes, such as calciturbidites, temperstites, debris-flow deposits, shelf-edge oolitic sands, tidal-channel facies etc.     

The building stones of Roman Sagalassos (SW Turkey): Facies analysis and provenance

Summary Different types of builing stones have been macro-scopically and petrographically characterized at the ancient city of Sagalassos (SW Turkey). The natural building stones include limestone, conglomerate, breccia, marble, travertine, granite and sand-to siltstone of different qualities. The provenance of most of the building stones may be related to local lithological units, both in the immediate area of the city and on its territory. Also, some stone types were clearly imported from considerable distance. Throughout the history of the city, local beige and pink good quality limestone remained the most important building stone. Both the high quality white limestone from the territory of the city and the marbles imported from a distance of 250 km, represent only a small fraction of the total amount of building stones used. While the use of the white limestone can be considered to form a clear but limited trend from the Trajanic period (98–117 AD) onwards, the import of the marbles must be considered as a rare event. The selection of building stone went hand in hand with the appreciation for structural strength and suitability for carving complex architectural decoration, together with the desire to obtain a polychrome architecture.     

Stratigraphy and facies of an oligocene fringing reef (Castro Limestone,Salento Peninsula,Southern Italy)

Summary The coastline of the Salento Peninsula (Apulia region, Southern Italy) is characterized by a rocky shore with spectacular cliffs where the investigated fringing reef complex, the so called Castro Limestone, spectacularly outcrops for at least 40 km. As reconstructed from several measured sections, the Castro Limestone, which is Middle Chattian in age from our own data, disconformably mantles a tectonically deformed falaise of Cretaceous-Eocene rocks and is overlain by a remarkable erosional surface characterized by a very peculiar rhodolite rudstone. The Castro Limestone unit can be considered as a classic unconformity bounded depositional sequence representing, most probably, a shelf margin prograding complex, related to the major Middle Oligocene sea level lowstand. Stratigraphic and sedimentologic features, together with paleontological characters, allow recognition of a virtually complete range of reef environments across the reef profile. Several geomorphic zones and associated facies are described, from the most landward reef area (‘back reef’) across the reef flat and reef from downward to the fore reef slope, contributing to a better knowledge of the evolution of Oligocene reefs and reef communities in Italy and in the Mediterranean area.     

Cenomanian carbonate facies and rudists along shallow intraplatform basin margin-the island of Cres (Adriatic Sea, Croatia)

Summary The island of Cres is located in the northern part of the Adriatic Sea. The island is built up of predominantly Cretaceous carbonates deposited in north-western part of extensive and long-lasting Adriatic Carbonate Platform. Owing to the influence of synsedimentary tectonics supported by eustatic changes during the latest Albian/Early Cenomanian, different sedimentary environments were established: from shallow intraplatform basin and related slope, across basin margin to protected shallow-platform. During the Early to Middle Cenomanian rudist communities (ichthyosarcolitid/caprinid/radiolitid)flourished along a relatively high-energy intraplatform basin margin. Fair amounts of coarse-grained bioclasts, derived almost exclusively from broken rudist shells, were deposited over a marginal depocenter. Contemporaneously, pithonellid wackestone-packstones containing microbioclasts and planktonic foraminifera were deposited basinward while marginal bioclastic sediments and limestone blocks of the basin margin origin were sporadically deposited within the basin. The opening of the Cres intraplatform basin was aborted and the basin was finally filled up during the Late Cenomanian. Since the Cres intraplatform basin was established at the beginning of the Cenomanian it probably represented the initiation phase in the north-western extension of the later Adriatic Trough development.     

Diversity, composition and structure of Late Eocene shelf-edge coral associations (Nago Limestone, Northern Italy)

Summary During the Late Eocene, shelf-edge patch reefs developed on the western margin of the Lessini Shelf. The coral fauna, studied in the Nago Limestone type locality, is described and interpreted for the first time, and provides further data for better understanding of the generally poorly known Eocene reef communities. Facies analysis was carried out across the shallowing upward succession that characterizes the well exposed type-section of the Nago Limestone. Four distinct facies are identified and a detailed qualitative-quantitative investigation has been applied to the coral-bearing facies in particular, in order to describe and quantify the distribution and palaeoecological zonation of corals. By a comparison of sedimentological and palaeoecological data, it is possible to reconstruct a depositional model of the Nago Limestone at its type locality. In particular, the palaeoecological study clearly reveals that corals change with depth in taxonomic composition, in percentage and proportion within the framework and in growth form, allowing the definition of a relative depth coral zonation. Three coral associations are recognized from the base to the top of the shallowing upward sequence. These differ from each other in the relative abundance of main reefbuilders, in the growth form exhibited by corals in growth position and in the density of the reef framework. These variations are interpreted as responses to major environmental controls which prevailed during the deposition of the different facies (mainly light intensity and hydrodynamic energy). The coral speciesActinacis rollei Reuss is the most abundant and ubiquitous coral of the Nago Limestone. Its adaptation to low-light levels is described here for the first time, confirming the high plasticity of this important Paleogene reef-builder. The results of the present study are finally compared with data from other Middle-Late Eocene European reef sites and some common features are inferred.     

Facies and paleoecology of the late ordovician (Caradoc-Ashgill) stromatoporoid bioherms of Tasmania, Australia

Summary Stromatoporoids, together with other sedentary organisms, form bioherms in the Ordovician Gordon Group which were deposited on a carbonate platform of the Western Tasmanian Terrane. The shallow marine carbonates of the older formations show monotonous lithofacies and biota. The variety of the lithofacies and the diversity of sedentary organisms increases in the younger formations which exhibit evidence of subaerial exposure (fissure fillings and mud-cracks). These phenomena partly reflect the tectonic history of the Western Tasmania Terrane, and probably indicate a general increase in amplitude of sea-level change during the late Ordovician (Caradoc-Ashgill). The bioherms are most frequent in the uppermost horizons (the Den Formation—late Caradoc to early Ashgill?), where the outerops exhibit floatstone and bindstone fabrics. Stromatoporoids and corals construct generally small-scale (less than several meters in width and less than 1 m in height) binding structure. Based on growth forms, stromatoporoid genera are assigned to two morphotypes. Morphotype A generally shows laminar to low domical forms (low height/width ratio) exhibiting ragged margins and sediment inclusions within skeletons. In contrast, morphotype B consists of high domical growth forms (high height/width ratio) and lacks sediment inclusions. These differences in growth forms are interpreted to reflect different modes of biomineralization, together with environmental preferences of the individual organisms. Results of this study and previous publications, overall suggest a progressive development and diversification of biohermal biota in the middle to upper Ordovician of Tasmania. The scale and diversity of the Tasmanian bioherms are probably much smaller than the bioherms and reefs of the younger ages (Silurian and Devonian), and for stromatoporoids, the tendency of diversification is consistent with those of the other Ordovician sections. The Gordon Group provides useful information regarding the early evolutionary history of the Ordovician-Devonian reef-forming communities.     

Facies analysis of the old Red Sandstone of Spitsbergen (Wood Bay Formation): Reconstruction of the depositional environments and implications of basin development

Summary The object of this paper is to provide a facies guide that helps subsequent workers recognizing different facies and palaeoenvironments of the terrestrial old Red Sandstone exposed in central N Spitsbergen. Sediments of the Early Devonian Wood Bay Formation represent continental molasse deposition under arid to semi-arid climatic conditions in three main depositional environments (rivers, alluvial plains, perennial lakes) represented by characteristic lithologies, sedimentary structures and microfacies. River channel deposits, consisting of conglomerates, very coarse-to very fine-grained sandstones and sandy siltstones are generally arranged in successive fining-upward sequences marked by specific sedimentary structures in a particular order. The sediments reflect the bed, mixed and suspended load of low sinuosity braided to high sinuosity meandering rivers. Adjacent overbank areas (levees, crevasse splays) and extensive alluvial plains are represented by reddish-brown, fine-grained sandstones to sandy siltstones and silty mudstones. The sediments are the accumulated, mixed and suspended load of floodwaters, which recurrently inundated the lowlands. Various lithofacies types, facies associations and sequences reflect the local formation of palaeosols, ephemeral flood lakes and boggy areas with persistent high water tables. Multicoloured, calcareous successions and single lime-stone beds intercalated in the red beds represent the depositional products of perennial, low relief, low-energy lakes, which developed in topographic depressions of the alluvial plains. The sediments reflect deposition in deep-water, littoral and palustrine sub-environments, forming regressive, shallowing-upward sequences in the central lake areas. The overall arrangement of the various facies reflects a terrestrial basin that developed from a steep-sloped, high-energy, river-dominated molasse trough into a level, lowenergy coastal plain, marked by broad mud flats and the formation of extensive perennial lakes.     

Facies arrangement and cyclostratigraphic architecture of a shallow-marine,warm-water carbonate platform: the Late Carboniferous Ny Friesland Platform in eastern Spitsbergen (Pyefjellet Beds,Wordiekammen Formation,Gipsdalen Group)

During the Late Carboniferous, a spacious warm-water carbonate platform developed across the eastern part of the present Arctic archipelago of Svalbard. The platform initiated in the Moscovian on an uplifted fault block (Ny Friesland High) and progradated during the Late Moscovian to Early Kasimovian into the adjacent Campbellryggen Basin (central Spitsbergen). The fossiliferous platform strata are characterized by a pronounced cyclicity formed by stacked parasequences, which consist of defined, subtidal to supratidal facies-set successions reflecting a general shallowing of the depositional area. Up to 17 of these shallowing-upward cycles, bounded by distinct discontinuity (marine flooding) surfaces due to the recurrent emersion and subsequent flooding of the platform surface, have been recognized within the platform strata. The stacked cycles are the result of global, glacio-eustatic, high-frequent and high-amplitudinal sea-level fluctuations with eccentricity periodicities caused by ice volume changes during the Gondwana Land glaciation. Based on systematic changes of the cycles (thickness and internal facies composition), the upper part of the platform strata is interpreted as a progradational parasequence set of a late highstand system tract. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Evidence of two forms of poly(A) polymerase in germinated wheat embryos and their regulation by a novel protein kinase

Two forms of poly(A) polymerase (PAPI and PAPII) from germinated wheat embryos have been resolved on DEAE-cellulose ion-exchange chromatography by a linear gradient of 0-500 mM (NH(4))(2)SO(4). Further purification shows that both forms are monomeric in nature with an identical molecular weight, approximately 65 kDa. The phosphoprotein nature of PAPI and PAPII has been established by in vivo labelling with (32)P-orthophosphate. Acid hydrolysis of both (32)P-labelled purified PAPI and PAPII has revealed that phosphorylations generally take place in serine and threonine residues. PAPI and PAPII have also been characterised with respect to V(max) and K(m) for poly(A). The V(max) and K(m) values of PAPI are 28.57 and 11.37 microg, respectively, whereas 34.48 and 7.04 microg of PAPII. In vitro dephosphorylation of the purified enzyme by alkaline phosphatase leads to a significant loss of the enzyme activity, which is regained upon phosphorylation by a 65 kDa protein kinase (PK) purified from wheat embryos. The extent of phosphorylation by protein kinase shows that PK has similar affinity towards both PAPI and PAPII, whereas the phosphate incorporation in PAPII is twofold higher than PAPI suggesting their distinct chemical nature.     

Malonato complexes of oxidovanadium(IV): Synthesis, structural characterization and exploration of their insulin mimetic properties

Several bis-malonatooxidovanadium(IV) complexes of the general type [M₂(H₂O)_n][VO(mal)₂(H₂O)] (where M = Li(1), Na(2), K(3), Cs(4) and NH₄(5); n = 3.5, 1, 3, 1 and 1, respectively) were isolated in good yield and high purity. These complexes were fully characterized by various physicochemical techniques (elemental analysis, UV-Vis, IR, EPR, CV, etc.) complexes 1, 2 and 3 were structurally characterized by single crystal X-ray diffraction technique. In vivo antidiabetic properties of bis-malonato complexes 1, 2, 3 and 5 have been studied using Streptozotocin induced diabetic rats. Significant lowering of blood sugar level has been noticed. At the same time these complexes were found to regulate secondary pathophysiological complications like liver damage and lowering of the total antioxidant status (TAS) in diabetic rats. Results of these study are expected to a expand the possibility of designing new oxidovanadium(IV) complexes of O,O chelating ligands with significant antidiabetic properties.     

Ultrastructural study of embryonic and early adult germ cells,and their support cells,in both sexes of Xiphophorus (Teleostei:Poeciliidae)

The ultrastructure of the early spermatogonia in mature testes of the platyfish, Xiphophorus maculatus, was compared to that of oogonia in mature ovaries of X. maculatus and the related X. nigrensis. Both cell types were very similar and, characterized as being large, oval to round cells containing large, central nuclei with prominent nucleoli. Abundant mitochondria with sparse transverse cristae were located at one pole or around the nucleus. Annulate lamellae and electron-dense granular material (nuage) were present. Other organelles were not prominent. A female that had received a testis graft had testicular tissue containing mature spermatozoa within the ovary, indicating that cells were present that could develop along the male line. Special crosses were carried out to obtain all-male embryos of X. maculatus and all-female embryos of X. nigrensis. The ultrastructure of the germ cells in all embryonic gonads was similar to that of the adult cells. These results suggest the presence of sexually undifferentiated germ cells in the adult gonads of both sexes. The support cells investing all of these germ cells were also similar structurally and appeared to be undifferentiated.     

Synthesis and single crystal structures of first examples of tridentate ligands of (Te, N, S) type and their complexes with palladium(II), platinum(II) and ruthenium(II)

The First examples of (Te, N, S) type ligands, 2-CH₃SC₆H₄CHNCH₂CH₂TeC₆H₄-4-OCH₃ (L¹) and 2- CH₃SC₆H₄CHNHCH₂CH₂TeC₆H₄-4-OCH₃ (L²), and their metal complexes, [PdCl(L¹)]PF₆ · CHCl₃ · 0.5H₂O (4), [PtCl(L¹)]PF₆ (5), [PdCl(L²)]ClO₄.CHCl₃ (6), [PtCl(L²)]ClO₄ (7), and [Ru(p-cymene)(L²)](PF₆)₂ · CHCl₃ (8), have been synthesized and characterized. The single crystal structures of 4, 6 and 8 have revealed that both the ligands coordinate in them in a tridentate (Te, N, S) mode. The geometry around Pd in both the complexes has been found to be square planar, whereas for Ru in a half sandwich complex 8, it is found to be octahedral. Between two molecules of 4 there are intra and inter molecular weak Te?Cl [3.334(3) and 3.500(3) Å, respectively] interactions along with weak intermolecular Pd?Te [3.621(2) Å] interactions. The Pd-Te bond lengths are between 2.517(6) and 2.541(25) Å and the Ru-Te bond length is 2.630(6) Å. The crystal structure of [PdCl₂(4-MeO-C₆H₄- TeCH₂CH₂NH₂)] (9) is also determined. It is formed when KPF₆ is not added in the synthesis of 4 and Pd-complex of L¹ is recrystallized. Apart from Te?Cl secondary interactions, C-H?π interactions also exist in the crystal of 9.     

Morphological and structural studies of early mineral formation in enamel of rat incisors by electron spectroscopic imaging (ESI) and electron spectroscopic diffraction (ESD)

Morphological and structural analysis of the earliest stage of crystal formation in enamel of rat incisors, by use of energy filtering transmission electron microscopy (EFTEM), has shown needlelike crystallites with a dotlike substructure. We conclude that these dots (nanometer-sized particles) have developed at nucleating, active sites along the non-collagenous matrix proteins in enamel. Calcium and phosphate groups are bound at such active sites and develop to nuclei, which grow to these stable dots (nanometer-sized particles). The dots coalesce rapidly in longitudinal direction, along the matrix proteins, with neighbouring dots to form parallel arranged needlelike crystallites. These needles grow and coalesce in lateral directions to ribbon-platelike crystallites. In enamel most of the organic substance becomes decomposed and transported to the ameloblasts. Consequently, the ribbon-platelike crystallites can coalesce to form much thicker (hydroxy)-apatite crystals than in dentine. Already in the earliest stage of crystal formation the mineral chains of dots (nanometer-sized particles) and the needlelike crystallites show a parallel orientation in the direction of the c-axis of hydroxyapatite. This is supported by the texture of the 002 reflections in the corresponding electron spectroscopic diffraction patterns (ESD), which appear as the first Bragg reflections.     

A geographic distribution database of the Neotropical cassava whitefly complex (Hemiptera,Aleyrodidae) and their associated parasitoids and hyperparasitoids (Hymenoptera)

Whiteflies (Hemiptera, Aleyrodidae) are represented by more than 1,500 herbivorous species around the world. Some of them are notorious pests of cassava (Manihot esculenta), a primary food crop in the tropics. Particularly destructive is a complex of Neotropical cassava whiteflies whose distribution remains restricted to their native range. Despite their importance, neither their distribution, nor that of their associated parasitoids, is well documented. This paper therefore reports observational and specimen-based occurrence records of Neotropical cassava whiteflies and their associated parasitoids and hyperparasitoids. The dataset consists of 1,311 distribution records documented by the International Center for Tropical Agriculture (CIAT) between 1975 and 2012. The specimens are held at CIAT’s Arthropod Reference Collection (CIATARC, Cali, Colombia). Eleven species of whiteflies, 14 species of parasitoids and one species of hyperparasitoids are reported. Approximately 66% of the whitefly records belong to Aleurotrachelus socialis and 16% to Bemisia tuberculata. The parasitoids with most records are Encarsia hispida, Amitus macgowni and Encarsia bellottii for Aleurotrachelus socialis; and Encarsia sophia for Bemisia tuberculata. The complete dataset is available in Darwin Core Archive format via the Global Biodiversity Information Facility (GBIF).     

Cytokinins: Synthesis of 2-, 8-, and 2,8-substituted 6-(3-methyl-2-butenylamino)purines and their relative activities in promoting cell growth

We have synthesized 2- and 8-monosubstituted and 2,8-disubstituted derivatives of the cytokinin 6-(3-methyl-2-butenylamino)purine (N⁶-isopentenyladenine) and have shown the dependence of growth-promoting activity in the tobacco bioassay upon the position, number, and type of substituent. The representative substituent groups were MeS, Me, MeSO₂, C₆H₅CH₂S, HS and Cl. The 8-methyl derivative was exceptional in being more active than the unsubstituted parent compound. In general, substitution in the 8-position decreases activity less than substitution in the 2-position, with the exception of the electron-attracting methylsulfonyl. Substitution in both the 2- and 8-positions lowers the activity more than substitution at either single position on the adenine nucleus, with the exception of the 2,8-dimethyl derivative. The chloro and methylthio derivatives show activity in the same range as the methyl derivatives, and the mercapto compounds, which exist mainly as CS tautomers, show somewhat less activity than the corresponding methylthio compounds. Bulky (C₆H₅CH₂S and MeSO₂) and strongly electron-attracting (MeSO₂) substituents cause relatively great reduction in cytokinin activity.     

Chemical constituents of rice (Oryza sativa) hulls and their herbicidal activity against duckweed (Lemna paucicostata Hegelm 381)

Four new compounds, stigmastanol-3beta-p-glyceroxydihydrocoumaroate (1), stigmastanol-3beta-p-butanoxydihydrocoumaroate (2), lanast-7,9(11)-dien-3alpha,15alpha-diol-3alpha-D-glucofuranoside (3) and 1-phenyl-2-hydroxy-3,7-dimethyl-11-aldehydic-tetradecane-2-beta-D-glucopyranoside (4), along with several known compounds were isolated from the methanol extract of hulls of Oryza sativa. The new structures were established by one- and two-dimensional NMR and in combination with IR, EI/MS, FAB/MS and HR-FAB/ MS. Compound (3) strongly inhibited the growth of duckweed (Lemna paucicostata Hegelm 381), whilst compounds (2) and (4) exhibited weak inhibition.