Towards microbiological quality assurance in radiation sterilization processing: a limiting case model

A Limiting Case Model has been developed which describes the dependence on radiation dose of the proportion of items, in a population of items subjected to irradiation, which are contaminated by one or more organisms. This model is independent of the initial distribution of numbers of micro-organisms on items and represents a conservative approach to estimation of the proportions of non-sterile items in an irradiated population of items.     

Towards microbiological quality assurance in radiation sterilization processing: simulation of the radiation inactivation process

A method is developed for computer simulation of the inactivation of microorganisms on items by irradiation. It is shown that in a population of items subjected to increasing doses of radiation the proportion contaminated approaches the appropriate Limiting Case, outlined in a previous paper, as numbers of organisms are decreased by inactivation. The behaviour of populations of items having different proportions of 'spikes' (high bioburden levels) is considered.     

Microbiological Quality Control of Sterilized Products: Evaluation of a Model Relating Frequency of Contaminated Items with Increasing Radiation Treatment

A model describing the dependence of the proportion of items contaminated ( P ) in a population of items on radiation dose ( D ) has been developed. The model was evaluated for a range of doses assuming a Poissonian distribution of micro-organisms on items prior to and during irradiation and radiation inactivation according to 'multiple-hit' kinetics; curves relating P and D were constructed. The influence on curve shape of changing the initial average number of micro-organisms on items and of varying parameters of microbial sensitivity to radiation was assessed. Consideration was given to the value of using sub-process radiation doses in microbiological quality control testing.     

Exploitation of a single species by a threshold management policy

Continuous time models of single exploited populations usually generate outcomes expressing a dependence of yield and economic items on harvest intensity. In this work it is shown that a known threshold policy is able to generate yield and related economic items that do not depend on harvest intensity, but rather on the values of the population threshold itself and the species intrinsic parameters. It is argued that since this result can be carried over to other models of single species dynamics, it may have significant implications in the management and conservation of exploited populations.     

The effect of a competitor on a model adaptive radiation

The ecological forces shaping adaptive radiations are of great interest to evolutionary ecologists. Here, we experimentally test the hypothesis that the diversification of a lineage should be limited in the presence of competition from another taxon. We do this by studying a model microbial adaptive radiation (the generation of phenotypic diversity in asexual lineages of the bacterium Pseudomonas fluorescens) in the presence or absence of a competitor (Pseudomonas putida). In a spatially heterogeneous environment, the competitor P. putida reduced P. fluorescens population size only slightly and had no effect on diversification. In a spatially homogeneous environment, the competitor reduced P. fuoresecens population size to a much greater extent. Again the final extent of diversification in P. fluorescens was not affected by the competitor, but early diversification was accelerated. In this environment, P. putida suppressed the growth of a common variant of P. fluorescens and directly or indirectly facilitated the growth of a rare morph. Our results suggest that competition experienced by diversifying lineages may have complex effects on adaptive radiations not fully captured by current theory.     

Estimating the lowest detectable dose of ionizing radiation by FISH whole-chromosome painting

Chromosome translocations are the hallmark of exposure to ionizing radiation, but they also occur spontaneously, and their frequencies increase dramatically with age. This complicates dosimetry unless a pre-exposure sample is available for each putatively exposed individual. Here we use published values for translocations in unexposed subjects from a wide range of ages, together with data from an in vitro (137)Cs dose-response curve, to estimate the minimum dose of whole-body radiation that is detectable by translocation analyses in individuals of a given age. For subjects aged 20 to 69 years, we show that the minimum detectable acute dose increases linearly with age at a rate of 0.179, 0.218 and 0.256 cGy per year for significance levels of P = 0.05, P = 0.01 and P = 0.001, respectively. For chronic exposures, the corresponding minimum detectable doses are 1.591, 2.270 and 3.055 cGy per year. For newborns, the 95th and 99th percentiles of translocation frequencies are 0.20 and 0.31 per 100 cell equivalents, respectively, indicating that values greater than these are consistent with exposures at P = 0.05 and P = 0.01, respectively. These results improve our understanding of the requirements and limitations for performing biological dosimetry when only the age of the exposed individual is known.     

Assessment of prey overlap between a native (Polistes humilis) and an introduced (Vespula germanica) social wasp using morphology and phylogenetic analyses of 16S rDNA

Abstract In newly invaded communities, interspecific competition is thought to play an important role in determining the success of the invader and its impact on the native community. In southern Australia, the native Polistes humilis was the predominant social wasp prior to the arrival of the exotic Vespula germanica (Hymenoptera: Vespidae). Both species forage for similar resources (water, pulp, carbohydrate and protein prey), and concerns have arisen about potential competition between them. The aim of this study was to identify the protein foods that these wasps feed on. As many prey items are masticated by these wasps to the degree that they cannot be identified using conventional means, morphological identification was complemented by sequencing fragments of the mitochondrial 16S rRNA gene. GenBank searches using blast and phylogenetic analyses were used to identify prey items to at least order level. The results were used to construct complete prey inventories for the two species. These indicate that while P. humilis is restricted to feeding on lepidopteran larvae, V. germanica collects a variety of prey of invertebrate and vertebrate origin. Calculated values of prey overlap between the two species are used to discuss the implications of V. germanica impacting on P. humilis. Results obtained are compared to those gained by solely 'conventional' methods, and the advantages of using DNA-based taxonomy in ecological studies are emphasized.     

Satiation and the functional response: a test of a new model

Abstract. 1. A model of the functional response to prey density is derived to include the reduction in time available for search, T_s , resulting from predator satiation.
2. For larger prey items predator satiation occurs at each prey capture and T_s is reduced by the attack time and digestive pause of a series of attack cycles. For small prey items predator foraging is continuous at low densities with T_s reduced solely by attack time. At higher densities predator satiation occurs after the capture of several small prey items and T_s is reduced by the attack time and digestive pause of a series of foraging cycles.
3. A comparison of the predicted asymptotic level of prey capture using experimentally estimated parameter values, with the maximum consumption of aphids by larval and adult coccinellids provides a test of the satiation model.
4. The limitation of prey capture by predator satiation is discussed with reference to handling time and the success of coccinellids in biological control.     

中华蟾蜍血液生理生化指标的测定

本文对中华蟾蜍（Bufo gargarizans）血液生理和生化指标进行了测定,并对其测定结果进行了t检验。结果显示,中华蟾蜍血液生理生化指标中白蛋白（ALB）、总蛋白（TP）、甘油三酯（TG）、总胆固醇（CHO）、丙氨酸氨基转移酶（ALT）、天门冬氨酸氨基转移酶（AST）、乳酸脱氢酶（LDH）、葡萄糖（Glu）、血清钙（Ca）、血清氯（Cl）、血清磷（P）、血清镁（Mg）、尿素（Urea）、血清钠（Na）雌雄问均差异不显著（P〉0．05）;碱性磷酸酶（ALP）、血清钾（K）两项指标雌雄之间差异显著（P〈0．05）;肌酐（Cre）在雌雄之间差异极显著（P〈0．01）,从测定结果可看出中华蟾蜍雌雄间血液生理生化值差异不大。     

Food segregation in three species of portunid crabs

Gastric mills of 2,619 specimens of portunid crabs(Portunus pelagicus, P. sanguinolentus andCharybdis feriatus) in Tolo Harbour, Hong Kongwere examined. Of these, 1,498 containedrecognizable food items. A total of 34 food items wereidentified, 10 of which (29.4%) were common to thethree crab species. The principal food items werebivalves, decapods, fish and algae. However, thepercent frequency of occurrence of these food itemsdiffered significantly (ANOVA, p < 0.001) among thecrabs. In addition to these principalfood items, differences were noted in other dietarycategories: P. pelagicusand P. sanguinolentus fed on the brittle starOphiura kinbergi, whereas P.sanguinolentus and C. feriatus fed on detritusand gastropods. The diet of P. sanguinolentuswas found to be more similar to C. feriatus thanto P. pelagicus. Exploitation of different fooditems and selective feeding on common prey may reduceinter-specific competition for natural food resourcesand allow the three portunid crabs to co-exist in thesame habitat. This revised version was published online in July 2006 with corrections to the Cover Date.     

捕食风险对高原鼠兔食物大小选择的影响

文章报道了捕食风险条件下高原鼠兔对食物大小选择的格局。在实验箱中放置艾虎以改变捕食风险水平, 食物按体积大小分为4种食物项目, 并测定各项目摄入率和取食单个食物项目的进食时间, 结果表明, 摄入率与进食时间依食物项目体积的增大而增加。将大食物与小食物项目配对并供高原鼠兔选择时, 食物项目的利用率视环境状况而不同。捕食风险处理中, 小食物利用率依其进食时间的减少而增加, 其程度与所配对的食物项目的摄入率和进食时间有关。在捕食风险的作用下, 高原鼠兔的食物选择格局反映了能量摄取与风险避免间的权衡。     

Value computation in humans

Things afford positive, neutral, or negative long-run effects on the replicative probability of the focal individual's genes. At the most general level, values are internal estimates of those effects. Value information steers physiology and behavior in the right direction: approach apple, avoid lion. Thus, value computation is of paramount biological importance. Task analysis suggests there are many prerequisites for valuing things aptly. Here, I focus on two: the need to compute value accurately, and the need to properly feed and integrate value information into the various systems that use value information (e.g., emotion systems). For example, the subjective food value imputed to an apple needs to reflect the nutrient content of the apple (accuracy); the intensity of gratitude aroused if someone gave you an apple needs to reflect the food value imputed to the apple (integration). Here, I evaluate these hypotheses with two preregistered studies. Consistent with the integration hypothesis, there are close correspondences between (i) the food values that participants impute to each of 40 food items (Study 1; goods) and (ii) the social values and the social emotions (including: gratitude, anger, shame, and pride) that result when those food items occur as constituents of broader social events. Similar correspondences are observed when participants evaluate each of 28 diseases and injuries (Study 2; bads). Consistent with the accuracy hypothesis, exploratory analyses indicate that the food values, the social values, and the social emotions elicited by the food items all track the nutrient content of those food items. Valuation is inherently a computational process. For this reason, a computational–functionalist perspective is distinctively suited to spur progress in our understanding of human values.     

Photosynthetically active radiation and its relationship with global solar radiation in Central China

Photosynthetically active radiation (PAR) and other solar components were observed for a period of 3 years at Wuhan, China to determine for the first time the temporal variability of PAR fraction [PAR/G (G here stands for global solar radiation)] and its dependence on different sky conditions in Central China. PAR, G and PAR/G showed similar seasonal features that peaked in summer and reached their lowest values in winter. The seasonal PAR/G ranged from 1.70 E MJ^?1 (winter) to 2.01 E MJ^?1 (summer) with an annual mean value of 1.89 E MJ^?1. Hourly values of PAR/G increased from 1.78 to 2.11 E MJ^?1 on average as sky conditions changed from clear to cloudy. Monthly mean hourly PAR/G revealed a diurnal variation, with highest values observed around sunrise and sunset, slightly higher PAR fractions were also found around noon for most months. The effect of daylength on PAR/G was also studied and no significant impact was found. Three models were developed to estimate PAR from G. These models consisted of atmospheric parameters that were found to cause substantial changes of PAR/G, such as sky clearness, brightness, path length and the sky clearness index. The estimations obtained from different models were very close to the measured values with maximum relative errors below 8 % (hourly values) in Wuhan. The models were not only tested at seven radiation stations in Central China, but also verified in six stations with different climates in China. The models were found to estimate PAR accurately from commonly available G data in Central China; however, the results also implied that the models need to be modified to account for local climatic conditions when applied to the whole country.     

Development and Analysis of Modified Paired Comparisons by Use of Linearized Nonlinear Regression

The linearized nonlinear regression method (Walsh, 1963) has substantial curve-fitting flexibility. It also permits isolation and probabilistic investigation of pertinent effects, and can be used for developing paired comparisons for persons, animals, or plants (“items” of a given type). Here, an item is identified by the values for specified characteristics, and two kinds of “treatment” (e. g., exposure and nonexposure to radiation) are compared with respect to observed values for a given characteristic. Ideally, two items being compared for treatment effect should be the same with regard to the other characteristics (those not used for comparison). That is, they should have the same set of values for these other characteristics. This ideal situation seldom occurs. However, by suitable use of the linearized nonlinear regression model, composite items can be constructed (for given treatment) that are the same with respect to the other characteristics. Modified paired comparisons are obtained on the basis of these composite items. The probability properties of modified paired comparisons can be very heterogeneous, so that special concepts and statistical techniques are needed. Two approaches for development of tests and confidence intervals are given. Some applications involving exposure to radiation are discussed.     

Niche overlap between juvenile flatfishes, Platichthys flesus and Solea solea, in a southern European estuary and adjacent coastal waters

The distribution and abundance patterns as well as the feeding ecology of two flatfishes, Platichthys flesus (Linnaeus, 1758) and Solea solea (Linnaeus, 1758), were studied in the Douro estuary and adjacent coastal waters (Portugal) in order to evaluate the niche overlap between these species. Fish were collected during sampling surveys conducted every 2 months between November 2000 and March 2002 using a 12‐m otter‐trawl with 18 mm stretched mesh size, at 12 sites within the estuary and six sites in the adjacent coastal area. The highest densities of P. flesus were registered in the middle estuary; a peak density of 9.12 ind 1000 m^?2 was obtained in October 2001. Solea solea densities were low compared with P. flesus; the highest values were also recorded in the middle estuary in October 2001. For both species, the proportion of juveniles was above 90% within the estuary. Highest densities of P. flesus and S. solea were recorded at sites with low water depth and high densities of crustaceans and polychaetes, the main food items in the diet of these species. High values of spatial and diet niche overlap were found between these two flatfishes (0.97 and 0.92, respectively).     

Sensitivity of planktonic and biofilm-associated Salmonella spp. to ionizing radiation

Salmonella enterica forms biofilms that are relatively resistant to chemical sanitizing treatments. Ionizing radiation has been used to inactivate Salmonella on a variety of foods and contact surfaces, but the relative efficacy of the process against biofilm-associated cells versus free-living planktonic cells is not well documented. The radiation sensitivity of planktonic or biofilm-associated cells was determined for three food-borne-illness-associated isolates of Salmonella. Biofilms were formed on sterile glass slides in a coincubation apparatus, using inoculated tryptic soy broth, incubated at 37 degrees C for 48 h. Resulting biofilms were 18 to 24 microm in height as determined by confocal scanning laser microscopy. The planktonic and biofilm cultures were gamma irradiated to doses of 0.0 (control), 0.5, 1.0, 1.5, 2.0 and 2.5 kGy. The D(10) value (the dose of radiation required to reduce a population by 1 log(10), or 90%) was calculated for each isolate-culture based on surviving populations at each radiation dose. The D(10) values of S. enterica serovar Anatum were not significantly (P < 0.05) different for biofilm-associated (0.645 kGy) and planktonic (0.677 kGy) cells. In contrast, the biofilm-associated cells of S. enterica serovar Stanley were significantly more sensitive to ionizing radiation than the respective planktonic cells, with D(10) values of 0.531 and 0.591 kGy, respectively. D(10) values of S. enterica serovar Enteritidis were similarly reduced for biofilm-associated (0.436 kGy) versus planktonic (0.535 kGy) cells. The antimicrobial efficacy of ionizing radiation is therefore preserved or enhanced in treatment of biofilm-associated bacteria.     

Phosphorus inputs unmask negative effects of ultraviolet radiation on algae in a high mountain lake

Ultraviolet solar radiation (UVR) and atmospheric nutrient loads to pristine ecosystems are global climate change phenomena that simultaneously affect aquatic organisms in ways not easily predicted by single factor studies. Plankton in a high mountain lake was exposed in situ to increasing phosphorus (P) concentrations (mimicking atmospheric pulses) in absence or presence of UVR in order to identify their interactive effect on functional [primary production, organic carbon (C) release (EOC), and percentage of C released (%EOC)], growth rate, structural–physiological (algal biomass, sestonic C, P content, chlorophyll a (Chl a), and Chl a : C ratio, P cell quota, cell‐specific Chl a), and stoichiometric (autotroph C : P ratio) traits. The availability of P after the pulse determined the intensity of responses by primary producers to UVR stress. All structural–physiological and functional variables significantly increased by up to two orders of magnitude in response to P enrichment. UV radiation, over a long‐term scale, exerted significant deleterious effects on most structural–physiological variables when inorganic P was added at high levels (≥30 μg P L^?1). The subsequent unexpected negative synergistic UVR × P effect on algal development did not support our initial hypothesis that P input might buffer the harmful UVR effect. UVR exerted a weak negative effect on primary production but strongly enhanced the absolute and percentage excretion of C (up to 60%), mechanism responsible of a significant reduction in autotroph C : P ratios. We propose that low sestonic C : P ratios are the outcome of an adaptive strategy of algae in environments with high UVR exposure and extreme nutrient limitation and have important implications for C flux through grazing vs. microbial food webs in oligotrophic systems.     

Comparative trophic ecology of two sympatric guitarfishes Pseudobatos (Chondrichthyes,Rhinobatidae) from Southeast Brazil,southwestern Atlantic

The present study compares the trophic ecology of two guitarfishes (Pseudobatos percellens and Pseudobatos horkelii) from the continental shelf of the São Paulo State, Brazil, caught by the bottom pair trawls between 2007 and 2009. These two sympatric species are under different threat categories, “Vulnerable” and “Critically Endangered,” respectively, according to Brazilian agencies. Thus, any study considering trophic ecology parameters is pivotal in understanding the trophic ecology role of such species in the ecosystem. The authors analysed 500 stomachs of P. percellens and 108 of P. horkelii, quantifying with dietary indexes: numerical (%N), gravimetric (%W), frequency of occurrence (%FO) and the prey-specific index of relative importance (%PSIRI). For P. percellens and P. horkelii, 26 and 14 different prey items were found, respectively. Crustacea and Teleostei were the most important prey items for both species, indicating a specialist feeding behaviour due to their low niche amplitude. The results provide evidence related to ontogenetic dietary shift in P. percellens and individual-level diet specialization in both species. These two benthic-demersal elasmobranchs are important mesopredators (3,7 for P. percellens, and 3,5 for P. horkelii) in the study area, with high trophic-level values.     

The Changing Face of P300 BCIs: A Comparison of Stimulus Changes in a P300 BCI Involving Faces,Emotion, and Movement

Background

One of the most common types of brain-computer interfaces (BCIs) is called a P300 BCI, since it relies on the P300 and other event-related potentials (ERPs). In the canonical P300 BCI approach, items on a monitor flash briefly to elicit the necessary ERPs. Very recent work has shown that this approach may yield lower performance than alternate paradigms in which the items do not flash but instead change in other ways, such as moving, changing colour or changing to characters overlaid with faces.

Methodology/Principal Findings

The present study sought to extend this research direction by parametrically comparing different ways to change items in a P300 BCI. Healthy subjects used a P300 BCI across six different conditions. Three conditions were similar to our prior work, providing the first direct comparison of characters flashing, moving, and changing to faces. Three new conditions also explored facial motion and emotional expression. The six conditions were compared across objective measures such as classification accuracy and bit rate as well as subjective measures such as perceived difficulty. In line with recent studies, our results indicated that the character flash condition resulted in the lowest accuracy and bit rate. All four face conditions (mean accuracy >91%) yielded significantly better performance than the flash condition (mean accuracy = 75%).

Conclusions/Significance

Objective results reaffirmed that the face paradigm is superior to the canonical flash approach that has dominated P300 BCIs for over 20 years. The subjective reports indicated that the conditions that yielded better performance were not considered especially burdensome. Therefore, although further work is needed to identify which face paradigm is best, it is clear that the canonical flash approach should be replaced with a face paradigm when aiming at increasing bit rate. However, the face paradigm has to be further explored with practical applications particularly with locked-in patients.