Characterisation of the effect of a simulated hydrocarbon spill on diazotrophs in mangrove sediment mesocosm

An analysis of the effect of an oil spill on mangrove sediments was carried out by contamination of mesocosms derived from two different mangroves, one with a history of contamination and one pristine. The association between N₂ fixers and hydrocarbon degradation was assessed using quantitative PCR (qPCR) for the genes rrs and nifH, nifH clone library sequencing and total petroleum hydrocarbon (TPH) quantification using gas chromatography. TPH showed that the microbial communities of both mangroves were able to degrade the hydrocarbons added; however, whereas the majority of oil added to the mesocosm derived from the polluted mangrove was degraded in the 75 days of the experiment, there was only partially degradation in the mesocosm derived from the pristine mangrove. qPCR showed that the addition of oil led to an increase in rrs gene copy numbers in both mesocosms, having almost no effect on the nifH copy numbers in the pristine mangrove. Sequencing of nifH clones indicated that the changes promoted by the oil in the polluted mangrove were greater than those observed in the pristine mesocosm. The main effect observed in the polluted mesocosm was the selection of a single phylotype which is probably adapted to the presence of petroleum. These results, together with previous reports, give hints about the relationship between N₂ fixation and hydrocarbon degradation in natural ecosystems.     

Reproductive Aspects of a Tropical Population of the Fiddler Crab Uca annulipes (H. Milne Edwards, 1837) (Brachyura: Ocypodidae) at Costa Do Sol Mangrove, Maputo Bay, southern Mozambique

Uca annulipes(H. Milne Edwards) is the dominant fiddler crab inhabiting mangrove forests in East Africa. However, several aspects concerning its reproduction are poorly known. Such information is necessary for a better understanding of several biological aspects occurring in this species. The aim of this study was to assess the reproductive biology of Uca annulipes as well as some factors determining its breeding season. Samplings were undertaken from January to December 2002 at Costa do Sol, a tropical mangrove forest around Maputo Bay, southern Mozambique. Crabs were randomly sampled, measured for carapace width (CW) and checked for the presence of eggs on female pleopods. Like most tropical brachyurans, Uca annulipes follows a continuous reproduction throughout the year with peaks of spawning during summer season and low frequency of egg-bearing females during winter. The frequency of ovigerous females was correlated with the air temperature (r ²= 0.652, p < 0.05) and rainfall (r ²= 0.897, p < 0.001), with the last parameter being the most important factor regulating the reproductive activity of this crab.     

Diversity of ndo genes in mangrove sediments exposed to different sources of polycyclic aromatic hydrocarbon pollution

Polycyclic aromatic hydrocarbon (PAH) pollutants originating from oil spills and wood and fuel combustion are pollutants which are among the major threats to mangrove ecosystems. In this study, the composition and relative abundance in the sediment bacterial communities of naphthalene dioxygenase (ndo) genes which are important for bacterial adaptation to environmental PAH contamination were investigated. Three urban mangrove sites which had characteristic compositions and levels of PAH compounds in the sediments were selected. The diversity and relative abundance of ndo genes in total community DNA were assessed by a newly developed ndo denaturing gradient gel electrophoresis (DGGE) approach and by PCR amplification with primers targeting ndo genes with subsequent Southern blot hybridization analyses. Bacterial populations inhabiting sediments of urban mangroves under the impact of different sources of PAH contamination harbor distinct ndo genotypes. Sequencing of cloned ndo amplicons comigrating with dominant DGGE bands revealed new ndo genotypes. PCR-Southern blot analysis and ndo DGGE showed that the frequently studied nah and phn genotypes were not detected as dominant ndo types in the mangrove sediments. However, ndo genotypes related to nagAc-like genes were detected, but only in oil-contaminated mangrove sediments. The long-term impact of PAH contamination, together with the specific environmental conditions at each site, may have affected the abundance and diversity of ndo genes in sediments of urban mangroves.     

Population and reproductive biology of the fiddler crab Uca thayeri Rathbun, 1900 (Crustacea: Ocypodidae) in a tropical mangrove from Northeast Brazil

Population and reproductive biology of Uca thayeri Rathbun, 1900 were studied for the first time in a tropical mangrove. Absolute density, sex ratio, population structure, handedness, breeding season and fecundity were investigated. Seven transects were delimited in a mangrove area of the Pacoti River, Northeast of Brazil (3° 43′ 02″ S/38° 32′ 35″ W). On each transect, ten 0.25 m² squares were sampled on a monthly basis during low tide periods from September 2003 to August 2004. A total of 483 crabs were obtained, of which 250 were males, 219 non-ovigerous females, and 14 ovigerous females. The U. thayeri population presented bi-modal size frequency distribution, with males and non-ovigerous females not differing significantly size-wise. Ovigerous females were larger than males and non-ovigerous females. The overall sex ratio (1:1.07) did not differ significantly from the expected 1:1 proportion. The major cheliped was the right one in 50% of the males. The observed density was of 8.5 individuals/m², with the specimens being found mostly in shaded areas. Ovigerous females were found in 5 months of the year, coinciding with the rainy season, suggesting that the population of U. thayeri presents seasonal reproductive events. Juvenile crabs were more abundant during the dry period, while larger crabs were found mainly during the rainy period. The fecundity of the studied population was much smaller than that of subtropical populations of this species. The regression analysis shows that the number of eggs increases linearly with the increase of carapace width.     

Elevated nutrient content of tropical macroalgae increases rates of herbivory in coral,seagrass, and mangrove habitats

We explored the role of food quality in herbivore preference for macroalgae by comparing consumption of Acanthophora spicifera with and without elevated tissue nitrogen and phosphorus concentrations. Algal enrichment effects on herbivory were examined in coral, seagrass, and mangrove habitats along a sparsely populated Honduran island protected from fishing. Nutrient enrichment led to significantly increased grazing by herbivores across habitats. Consumption of enriched algae increased by 91% compared to controls among the mangrove roots, where herbivory rates were generally lowest. In the heavily grazed seagrass and coral habitats, nutrient enrichment increased consumption by 30 and 20%, respectively, with the effect more spatially variable than among the mangrove roots. We suggest that, at least on the local scale, intact herbivore populations may be able to compensate for effects of increased nutrient supply by locating and consuming nutrient-enriched algae, but that the importance of this mechanism varies both among and within habitats.Communicated by: R. C. Carpenter     

Establishment and growth of mangrove seedling in mangrove forests of southern Thailand

The demography and growth of mangrove seedlings in southern Thailand were studied for an 18-month period. Plots for measurement of seedlings were established using gradients of light and surface soil texture. The number of established propagules peaked from April to August, the peak forRhizophora being earlier than that forBruguiera. Under the mangrove forest canopy, the survivorship of seedlings established during May to December 1982 was 33% in June 1983. Light conditions and soil texture did not strongly affect initial seedling establishment, and the relationship between species seed size and water depth at a particular site influenced that were able to become established there. The elongation growth was large during the rainy season and in open sites. The growth ofR. apiculata Blume,B. parviflora Wight & Arn. andB. cylindrica Blume in open sites was more than ten times that of seedlings established in the shade. It has noted that light conditions affected the growth of young trees (>1 year old) to a greater degree than that of current-year seedlings.     

Sulphur‐oxidizing and sulphate‐reducing communities in Brazilian mangrove sediments

Mangrove soils are anaerobic environments rich in sulphate and organic matter. Although the sulphur cycle is one of the major actors in this ecosystem, little is known regarding the sulphur bacteria communities in mangrove soils. We investigated the abundance, composition and diversity of sulphur‐oxidizing (SOB) and sulphate‐reducing (SRB) bacteria in sediments from three Brazilian mangrove communities: two contaminated, one with oil (OilMgv) and one with urban waste and sludge (AntMgv), and one pristine (PrsMgv). The community structures were assessed using quantitative real‐time polymerase chain reaction (qPCR), polymerase chain reaction‐denaturing gradient gel electrophoresis (PCR‐DGGE) and clone libraries, using genes for the enzymes adenosine‐5′‐phosphosulphate reductase (aprA) and sulphite reductase (Dsr) (dsrB). The abundance for qPCR showed the ratio dsrB/aprA to be variable among mangroves and higher according to the gradient observed for oil contamination in the OilMgv. The PCR‐DGGE patterns analysed by Nonmetric Multidimensional Scaling revealed differences among the structures of the three mangrove communities. The clone libraries showed that Betaproteobacteria, Gammaproteobacteria and Deltaproteobacteria were the most abundant groups associated with sulphur cycling in mangrove sediments. We conclude that the microbial SOB and SRB communities in mangrove soils are different in each mangrove forest and that such microbial communities could possibly be used as a proxy for contamination in mangrove forests.     

Prolonged inundation and ecological changes in an Avicennia mangrove: implications for conservation and management

The mangrove around Sungei Pemburongunan, just west of Tanjong Batu and Istana Darul Aman in the Brunei-Muara District, is unique in that it contains the only pure stand of Avicennia marina in Brunei Darussalam. In mid-October, 1990 the mouth of Sungei Pemburongunan was closed due to a natural build-up of a sandbar across it. The mangrove quickly became flooded and adverse effects on the flora and fauna were observed during the following weeks. In mid-December a channel was dug across the sand bar to reduce the flooding and normalise the ecology. Some of the dying Avicennia and Lumnitzera have since recovered but others such as Acrostichum and Casuarina have not. Avicennia showed some interesting responses to prolonged inundation. Many of the Avicennia that had flowered during the flood produced seedlings which are now well rooted and 40–80 cm in height. The survival of large numbers of these seedlings is attributed to the floor-related decrease in the number of grapsid and sesarmid crabs which predate on them. The crab and mollusc populations have largely recovered. Unlike periodic short-term flooding which does not seem to have any apparent adverse affect on the ecosystem, prolonged inundation can result in the loss of the Avicennia and its associated flora and fauna. Thus, fragile mangrove ecosystems such as this need to be monitored and managed closely.This work demonstrates that contrary to conventional wisdom, human intervention and management can be beneficial to more fragile ecosystems, which could otherwise succumb to natural processes. Furthermore, it highlights the importance of the dynamic nature of the environment which should be considered in management and conservation programmes.     

红树林生态系统微生物驱动的氮素循环过程研究进展

微生物驱动的氮循环过程在红树林生态系统物质循环、净化外来污染物、维持生态系统平衡等方面起重要作用。相较于其他自然生态系统,因红树林处于沿海陆地交界地带,其氮循环过程及其相关微生物的种类丰富,受交错复杂的环境因素影响与调控。本文梳理了红树林土壤性质及特性,综述了红树林生态系统中由微生物驱动的固氮、氮素矿化、硝化、厌氧氨氧化、反硝化、异化硝酸盐还原为铵等主要的氮循环过程,并讨论了氮循环与其他循环的耦合过程。最后讨论pH、盐度、季节、螃蟹活动、红树林树种等环境因素对氮循环过程及其相关微生物丰度、多样性的影响。本综述以期为红树林湿地生态系统的保护和修复提供理论参考。     

The decomposition of mangrove litter in a subtropical mangrove forest

Decomposition of Avicennia marina (Forsk.) Vierh. leaf and woody litter (twigs) was studied using litter bag experiments in a subtropical mangrove forest at two tidal levels (high and low) with different inundation regimes and during two seasons (summer and winter). Losses in dry weight were best described by a single exponential model which showed loss rates of both leaves and twigs were significantly higher low down on the shoreline (greater inundation) and in summer. The time (days) required for the loss of half of the initial dry weight (t ₅₀) was summer: high 59, low 44; winter: high 98, low 78. For twigs the values (days) were summer: high 383, low 179; winter; high 1327, low 1207. There is an exponential relationship between leaf litter t ₅₀'s and latitude which indicates the importance of temperature and therefore season, to the dynamics of organic cycling and export in mangrove systems.     

Exploring the diversity of bacterial communities in sediments of urban mangrove forests

Municipal sewage, urban runoff and accidental oil spills are common sources of pollutants in urban mangrove forests and may have drastic effects on the microbial communities inhabiting the sediment. However, studies on microbial communities in the sediment of urban mangroves are largely lacking. In this study, we explored the diversity of bacterial communities in the sediment of three urban mangroves located in Guanabara Bay (Rio de Janeiro, Brazil). Analysis of sediment samples by means of denaturing gradient gel electrophoresis (DGGE) of 16S rRNA gene fragments suggested that the overall bacterial diversity was not significantly affected by the different levels of hydrocarbon pollution at each sampling site. However, DGGE and sequence analyses provided evidences that each mangrove sediment displayed a specific structure bacterial community. Although primer sets for Pseudomonas, alphaproteobacterial and actinobacterial groups also amplified ribotypes belonging to taxa not intended to be enriched, sequence analyses of dominant DGGE bands revealed ribotypes related to Alteromonadales, Burkholderiales, Pseudomonadales, Rhodobacterales and Rhodocyclales. Members of these groups were often shown to be involved in aerobic or anaerobic degradation of hydrocarbon pollutants. Many of these sequences were only detected in the sampling sites with high levels of anthropogenic inputs of hydrocarbons. Many dominant DGGE ribotypes showed low levels of sequence identity to known sequences, indicating a large untapped bacterial diversity in mangrove ecosystems.     

Extremely low genetic diversity across mangrove taxa reflects past sea level changes and hints at poor future responses

The projected increases in sea levels are expected to affect coastal ecosystems. Tropical communities, anchored by mangrove trees and having experienced frequent past sea level changes, appear to be vibrant at present. However, any optimism about the resilience of these ecosystems is premature because the impact of past climate events may not be reflected in the current abundance. To assess the impact of historical sea level changes, we conducted an extensive genetic diversity survey on the Indo‐Malayan coast, a hotspot with a large global mangrove distribution. A survey of 26 populations in six species reveals extremely low genome‐wide nucleotide diversity and hence very small effective population sizes (N_e) in all populations. Whole‐genome sequencing of three mangrove species further shows the decline in N_e to be strongly associated with the speed of past changes in sea level. We also used a recent series of flooding events in Yalong Bay, southern China, to test the robustness of mangroves to sea level changes in relation to their genetic diversity. The events resulted in the death of half of the mangrove trees in this area. Significantly, less genetically diverse mangrove species suffered much greater destruction. The dieback was accompanied by a drastic reduction in local invertebrate biodiversity. We thus predict that tropical coastal communities will be seriously endangered as the global sea level rises. Well‐planned coastal development near mangrove forests will be essential to avert this crisis.     

Interpopulation trophic niches and ontogenetic shifts of a mangrove fish predator

Fish trophic niches reflect important ecological interactions and provide insight into the structure of mangrove food webs. Few studies have been conducted in mangrove fish predators to investigate interpopulation trophic niches and ontogenetic shifts. Using stable isotope analysis and two complementary approaches, the authors investigated trophic niche patterns within and between two ontogenetic groups (juveniles and sub-adults) of a generalist predator (Acentrogobius viridipunctatus) in four mangroves with heterogeneous environmental conditions (e.g., tidal regimes, salinity fluctuations and mangrove tree community). The authors hypothesized that the trophic niche between populations would vary regionally and trophic position would increase consistently from juvenile to sub-adult stages. The results revealed that both δ¹³C and δ¹⁵N values varied greatly across populations and between ontogenetic groups, and complex spatio-ontogenetic variations were expressed by Layman's metrics. They also found some niche separation in space, which is most likely related to resource availability in spatially diverse ecosystems. In addition, trophic niche position increased consistently from juveniles to sub-adults, indicating ontogenetic feeding shifts. The isotopic plasticity index and Fulton's condition index also showed significant spatial-ontogenetic variation, which is consistent with optimal foraging theory. The findings highlight that trophic plasticity has a high adaptive value for mangrove fish predators in dynamic ecosystems.     

中国红树林生态系统保护空缺分析

红树林作为海岸带重要的生态系统类型,具有维持海岸生物多样性、防风固岸、促淤造陆等重要的生态功能,在气候变化和快速城市化背景下认识红树林受保护状况具有重要意义。以基于遥感解译的红树林分类数据为基础,通过空缺分析,分析了我国红树林的就地保护状况,结果显示我国分布的红树林总面积为264 km~2(尚不含我国港、澳、台的统计数据),其中61.4%在自然保护区内受到保护。从红树林分布的主要省份来看,在海南省分布的红树林面积较少但保护比例高,广西和广东省分布的红树林面积大但受保护面积比例相对较低。在3种红树林类型中,红树-木果楝林和红海榄-木榄林分布面积较小,但受保护的面积都在90%以上,秋茄-桐花树-白骨壤林分布的面积最大,但受保护的面积为52.6%。研究提出自然保护区外红树林分布的关键区域,并建议通过划定生态保护红线等方式来进行保护。     

Spatial structure of a leaf-removing crab population in a mangrove of North-Brazil

The leaf-removing decapod crab, Ucides cordatus plays a key role as ecological engineer in Brazilian mangrove ecosystems. We analyzed the spatial distribution of a specific population at two different scales to observe how individual behavior could alter spatial population structure. First, we conducted a spatial point pattern analysis of the burrow entrances and the Rhizophora mangle prop roots on the mangrove floor at a scale of few meters. Secondly, we analyzed at a large scale (10–100 m) the potential effects of surface elevation, light intensity, prop root coverage, species of neighboring tree (R. mangle, Laguncularia racemosa, Avicennia germinans) and pneumatophore density on the size and number of burrow entrances. At the same large scale, we conducted an analysis of clustering of the crabs around the R. mangle trees. At small scale, the burrow entrances, although aggregated around the prop roots, showed a regularly spaced distribution (∼25 cm) signaling an intraspecific competition among the crabs. At large scale, crabs preferred to install their burrows at an intermediate level of surface elevation and prop root coverage, and in R. mangle-dominated areas. At the same kind of habitats, the largest burrows, and thus potentially the largest crabs, were found in higher number than on other habitats. The R. mangle-dominated areas preference was confirmed by an aggregating around R. mangle trees in R. mangle-dominated forest, but only of large individuals in L. racemosa-dominated forest. These observations lead us to the definition of a preferred habitat for U. cordatus. Competition leading to the small-scale regular patterns was proposed as an explanation for exclusion of smaller crabs from preferred habitats seen at large scale. We hypothesize that this preferred habitat might explain at regional scale the variation of U. cordatus importance in Neotropical mangroves.     

Effects of plant density and age on the mating system of Kandelia candel Druce (Rhizophoraceae), a viviparous mangrove species

Mating system is an important factor affecting gene flow and genetic structure of plant populations. Based on identification of chlorophyll-deficient offsprings on heterozygous individuals, selfing rates were estimated for Kandelia candel, a viviparous mangrove species. Outcrossing rates were significantly decreased when population was thinned, indicating that plant density plays an important role in plant reproductive features. Selfing rate of young population was significantly higher than that of mature population, due to pollen flow barriers in young population, created by dense leaves and twigs.     

Environmental diel variation, parasite loads, and local population structuring of a mixed-mating mangrove fish

Genetic variation within populations depends on population size, spatial structuring, and environmental variation, but is also influenced by mating system. Mangroves are some of the most productive and threatened ecosystems on earth and harbor a large proportion of species with mixed-mating (self-fertilization and outcrossing). Understanding population structuring in mixed-mating species is critical for conserving and managing these complex ecosystems. Kryptolebias marmoratus is a unique mixed-mating vertebrate inhabiting mangrove swamps under highly variable tidal regimes and environmental conditions. We hypothesized that geographical isolation and ecological pressures influence outcrossing rates and genetic diversity, and ultimately determine the local population structuring of K. marmoratus. By comparing genetic variation at 32 microsatellites, diel fluctuations of environmental parameters, and parasite loads among four locations with different degrees of isolation, we found significant differences in genetic diversity and genotypic composition but little evidence of isolation by distance. Locations also differed in environmental diel fluctuation and parasite composition. Our results suggest that mating system, influenced by environmental instability and parasites, underpins local population structuring of K. marmoratus. More generally, we discuss how the conservation of selfing species inhabiting mangroves and other biodiversity hotspots may benefit from knowledge of mating strategies and population structuring at small spatial scales.     

福建同安湾潮间带红树林生境与非红树林生境大型底栖动物群落比较

底栖动物群落是红树林生态系统多样性研究的重要内容之一。为了解大型底栖动物群落对高有机质含量和富营养的红树林生境的响应, 从2006年4月到2007年1月, 对福建省同安湾红树林生境和非红树林生境大型底栖动物群落及其时空变化进行了研究。我们在同安湾红树林种植区设置了凤林(FL)和山后亭(XA)两条断面, 每条断面在红树林内各设2个取样站(FL1, FL2, XA-A和XA-B), 林外各设1个取样站(FL3和XA-C)。底质研究结果显示凤林3个取样站(FL1, FL2和FL3)的有机质含量均超过底质污染评价标准的临界值3.4%, 且无论凤林还是山后亭, 红树林生境的有机质含量均要高过非红树林生境。共获得大型底栖动物91种, 其中在红树林生境内获得77种, 高于非红树林生境内获得的67种。红树林生境和非红树林生境的大型底栖动物平均栖息密度分别为4,445.8 inds/m2 和1,707.2 inds/m2, 平均生物量分别为51.1 g/m2 和 94.6 g/m2。独立样本t-检验结果显示, 红树林生境和非红树林生境大型底栖动物平均栖息密度和平均生物量均存在显著差异。研究结果指示红树林生境对于寡毛类生存(如在高耐有机污染中能大量繁殖的沼蚓)有积极作用。但由于邻近的非红树林林生境的水淹时间更长, 一些具有移动能力的软体动物和甲壳动物能迁移到更适合生存的非红树林生境中去。其他底质因子如盐度和土壤中值粒径等也会影响大型底栖动物群落变化。     

Restoration of mangrove plantations and colonisation by native species in Leizhou bay,South China

To examine the natural colonisation of native mangrove species into remediated exotic mangrove stands in Leizhou Bay, South China, we compared soil physical–chemical properties, community structure and recruitments of barren mangrove areas, native mangrove species plantations, and exotic mangrove species—Sonneratia apetala Buch.Ham—between plantations and natural forest. We found that severely degraded mangrove stands could not regenerate naturally without human intervention due to severely altered local environments, whereas some native species had been recruited into the 4–10 year S. apetala plantations. In the first 10 years, the exotic species S. apetala grew better than native species such as Rhizophora stylosa Griff and Kandelia candel (Linn.) Druce. The mangrove plantation gradually affected soil physical and chemical properties during its recovery. The exotic S. apetala was more competitive than native species and its plantation was able to restore soil organic matter in about 14 years. Thus, S. apetala can be considered as a pioneer species to improve degraded habitats to facilitate recolonisation by native mangrove species. However, removal to control proliferation may be needed at late stages to facilitate growth of native species. To ensure sustainability of mangroves in South China, the existing mangrove wetlands must be managed as an ecosystem, with long-term scientific monitoring program in place.