Nitrogen input quality changes the biochemical composition of soil organic matter stabilized in the fine fraction: a long-term study

The chemical composition of soil organic matter (SOM) is a key determinant of its biological stability. Our objective in this study was to evaluate the effects of various sources of supplemental N on the chemical composition of SOM in the fine (<5 μm) mineral fraction. Treatments were fallow, maize/soybean in rotation, and continuous maize receiving no fertilizer (maize0N), synthetic fertilizer N (maize + N), or composted manure (maize + manure). The chemical structures in SOM associated with the fine fraction were determined using XANES spectroscopy at the C and N K-edges, which was assessed using multidimensional scaling. Analysis of amino sugar biomarkers were used to evaluate the fungal:bacterial contributions to the SOM. The addition of N to soils (i.e., maize + N, maize + manure, and maize/soybean treatments) resulted in the enrichment of proteinaceous compounds. Soils which did not receive supplemental N (i.e., fallow and maize0N treatments) were enriched in plant-derived compounds (e.g., aromatics, phenolics, carboxylic acids and aliphatic compounds), suggesting that decomposition of plant residues was constrained by N-limitation. Microbial populations assessed by amino sugar biomarker ratios showed that the highest contributions to SOM by bacteria occurred in the maize + manure treatment (high N input), and by fungi in the fallow treatment (low N input). The SOM in the maize + N and maize/soybean treatments was enriched in N-bonded aromatics; we attribute this enrichment to the abiotic reaction of inorganic N with organic C structures. The SOM in the maize + manure treatment was enriched in pyridinic-N, likely as a result of intense microbial processing and high SOM turnover. The presences of signals for ketone and pyrrole compounds in XANES spectra suggest their use as biomarkers for microbially transformed and stabilized SOM. The SOM in the maize + manure treatment was enriched in ketones which are likely microbial by-products of fatty acid catabolism. Pyrrole compounds, which may accumulate over the long term as by-products of protein transformations by an N-limited microbial community, were dominant in the fallow soil. A combination of molecular spectroscopy and biomarker analysis showed that the source of supplemental N to soil influences the stable C- and N-containing compounds of SOM in a long-term field study. Indeed, any increase in N availability allowed the microbial community to transform plant material into microbial by-products which occur as stable SOM compounds in the fine soil fraction.     

Contributions of freshwater mussels (Unionidae) to nutrient cycling in an urban river: filtration,recycling, storage,and removal

Physical separation of soil into different soil organic matter (SOM) fractions is widely used to identify organic carbon pools that are differently stabilized and have distinct chemical composition. However, the mechanisms underlying these differences in stability and chemical composition are only partly understood. To provide new insights into the stabilization of different chemical compound classes in physically-separated SOM fractions, we assessed shifts in the biomolecular composition of bulk soils and individual particle size fractions that were incubated in the laboratory for 345 days. After the incubation, also the incubated bulk soil was fractionated. The chemical composition of organic matter in bulk soils and fractions was characterized by ¹³C-CPMAS nuclear magnetic resonance spectroscopy and sequential chemical extraction followed by GC/MS measurements. Plant-derived lipids and lignin were abundant in particulate organic matter (POM) fractions of sand-, silt-, and clay-size and the mineral-bound, clay-sized organic matter. These results indicate that recent conceptualizations of SOM stabilization probably understate the contribution of plant-derived organic matter to stable SOM pools. Although our data indicate that inherent recalcitrance could be important in soils with limited aggregation, organo-mineral interactions and aggregation were responsible for long-term SOM stabilization. In particular, we observed consistently higher concentrations of plant-derived lipids in POM fractions that were incubated individually, where aggregates were disrupted, as compared to those incubated as bulk soil, where aggregates stayed intact. This finding emphasizes the importance of aggregation for the stabilization of less ‘recalcitrant’ biomolecules in the POM fractions. Because also the abundance of lipids and lignin in clay-sized, mineral-associated SOM was substantially influenced by aggregation, the bioavailability of mineral-associated SOM likely increases after the destruction of intact soil structures.     

Soil organic matter dynamics: a biological perspective derived from the use of compound-specific isotopes studies

Current attempts to explain the persistence of carbon in soils focuses on explanations such as the recalcitrant plant residues and the physical isolation of substrates from decomposers. A pool of organic matter that can persist for centuries to millennia is hypothesized because of the evidence provided by the persistence of pre-disturbance C in fallow or vegetation change experiments, and the radiocarbon age of soil carbon. However, new information, which became available through advances in the ability to measure the isotope signatures of specific compounds, favors a new picture of organic matter dynamics. Instead of persistence of plant-derived residues like lignin in the soil, the majority of mineral soil is in molecules derived from microbial synthesis. Carbon recycled multiple times through the microbial community can be old, decoupling the radiocarbon age of C atoms from the chemical or biological lability of the molecules they comprise. In consequence is soil microbiology, a major control on soil carbon dynamics, which highlights the potential vulnerability of soil organic matter to changing environmental conditions. Moreover, it emphasizes the need to devise new management options to restore, increase, and secure this valuable resource.     

Soil Organic Carbon Content Decreases in Both Surface and Subsoil Mineral Horizons by Simulated Future Increases in Labile Carbon Inputs in a Temperate Coniferous Forest

Soils represent important pools of soil organic carbon (SOC) that can be greatly influenced by labile C inputs, which are expected to increase in future due to CO₂ enrichment of atmosphere and a concomitant rise in plant primary productivity. Studying effects of variable labile C inputs on SOC pool helps to understand how soils respond to global change. However, this knowledge is missing for coniferous forest soils despite being widespread throughout the northern temperate zone. We conducted a 7-month field manipulation experiment to study the effects of variable labile C inputs (simulated by additions of C₄ sucrose) on the C content in soil fractions and on microbial abundance in the organic (O), surface mineral (A), and subsoil mineral (B) horizons of a temperate coniferous forest soil. SOC in less-protected soil fractions and total organic C were substantially decreased by labile C additions that simulated future increases in C inputs. The SOC losses were comparable between the A and B horizon (40% vs. 30%). However, because sucrose availability estimated from its incorporation into soil fractions and microbial biomass sharply decreased with soil depth, the loss of C was higher in the B than in the A horizon when related to the amount of sucrose added. Utilization of sucrose was highest by fungi in the O horizon and by bacteria in the mineral soil horizons. The results indicate that future increases in labile C inputs to coniferous forest soils will cause rapid and substantial losses of SOC in both the surface and subsoil mineral horizons.

     

Higher temperature sensitivity for stable than for labile soil organic carbon – Evidence from incubations of long‐term bare fallow soils

The impact of climate change on the stability of soil organic carbon (SOC) remains a major source of uncertainty in predicting future changes in atmospheric CO₂ levels. One unsettled issue is whether the mineralization response to temperature depends on SOC mineralization rate. Long‐term (>25 years) bare fallow experiments (LTBF) in which the soil is kept free of any vegetation and organic inputs, and their associated archives of soil samples represent a unique research platform to examine this issue as with increasing duration of fallow, the lability of remaining total SOC decreases. We retrieved soils from LTBF experiments situated at Askov (Denmark), Grignon (France), Ultuna (Sweden), and Versailles (France) and sampled at the start of the experiments and after 25, 50, 52, and 79 years of bare fallow, respectively. Soils were incubated at 4, 12, 20, and 35 °C and the evolved CO₂ monitored. The apparent activation energy (E_a) of SOC was then calculated for similar loss of CO₂ at the different temperatures. The E_a was always higher for samples taken at the end of the bare‐fallow period, implying a higher temperature sensitivity of stable C than of labile C. Our results provide strong evidence for a general relationship between temperature sensitivity and SOC stability upon which significant improvements in predictive models could be based.     

Thirty-seven years of soil nitrogen and phosphorus fertility management shapes the structure and function of the soil microbial community in a Brown Chernozem

We tested whether levels of soil available nitrogen (N) and phosphorus (P) control the composition and function of the soil microbial community in a Brown Chernozemic soil on the Canadian Prairie. Soil dissolved organic carbon, N and P, and microbial communities structure (phospholipid fatty acid profile) and function (enzyme activity) were evaluated in the fallow and first wheat (Triticum aestivum L. cv. AC Eatonia) phases of fallow-wheat-wheat rotations where the wheat received soil test recommended rates of mineral N and P fertilizers (+N+P), or where N (?N+P) or P (+N?P) fertilizer use was withheld for 37 years. Differential fertilization modified soil N and P availability, and microbial community structure. Low N level was a major constraint when a rapidly growing wheat crop (heading stage) was drawing on the resource, reducing both plant N uptake and soil microbial biomass-C in ?N+P soils. Available P level in +N?P soils was about half that measured in P-fertilized soils, but P did not limit plant productivity or microbial development at that time. Changes in the microbial community structure seemingly buffered the impact of lower P availability in +N?P soils. Phosphatase activity was not involved, but increased abundance of arbuscular mycorrhizal fungi might be associated with this effect. Low soil N availability explained lower specific denitrification and higher specific nitrogenase activities in ?N+P soil growing wheat. Higher denitrification activity in +N+P soil could be attributed to higher soil C level and fertilization-induced shifts observed in the structure of the soil microbial community. Irrespective of the fertility level of the soil, all microbial communities grew at the relative growth rate of 17% day^?1 in a nutrient limitation assay that revealed no C, N or P limitation in these communities. We conclude that mineral fertilization, which modifies soil available N and P fertility, can be a selective force causing structural and functional shifts in the soil microbial community with a resulting impact on soil quality and nutrient fluxes.     

Shifts in priming partly explain impacts of long‐term nitrogen input in different chemical forms on soil organic carbon storage

Input of labile organic carbon can enhance decomposition of extant soil organic carbon (SOC) through priming. We hypothesized that long‐term nitrogen (N) input in different chemical forms alters SOC pools by altering priming effects associated with N‐mediated changes in plants and soil microbes. The hypothesis was tested by integrating field experimental data of plants, soil microbes and two incubation experiments with soils that had experienced 10 years of N enrichment with three chemical forms (ammonium, nitrate and both ammonium and nitrate) in an alpine meadow on the Tibetan Plateau. Incubations with glucose–¹³C addition at three rates were used to quantify effects of exogenous organic carbon input on the priming of SOC. Incubations with microbial inocula extracted from soils that had experienced different long‐term N treatments were conducted to detect effects of N‐mediated changes in soil microbes on priming effects. We found strong evidence and a mechanistic explanation for alteration of SOC pools following 10 years of N enrichment with different chemical forms. We detected significant negative priming effects both in soils collected from ammonium‐addition plots and in sterilized soils inoculated with soil microbes extracted from ammonium‐addition plots. In contrast, significant positive priming effects were found both in soils collected from nitrate‐addition plots and in sterilized soils inoculated with soil microbes extracted from nitrate‐addition plots. Meanwhile, the abundance and richness of graminoids were higher and the abundance of soil microbes was lower in ammonium‐addition than in nitrate‐addition plots. Our findings provide evidence that shifts toward higher graminoid abundance and changes in soil microbial abundance mediated by N chemical forms are key drivers for priming effects and SOC pool changes, thereby linking human interference with the N cycle to climate change.     

太子参不同休耕年限土壤理化特征和微生物群落变化

太子参为福建道地中药材,连作效应严重限制其产业发展。休耕可以在一定程度上缓解连作效应,然而休耕对于缓解连作效应的机制尚不清楚。本文通过高通量测序分析不同休耕年限对太子参土壤微生物丰度及群落多样性的影响,并探索土壤理化性质、酚酸类物质与土壤微生物群落之间的关联性。结果表明:与对照太子参土壤相比,休耕土壤真菌多样性降低,细菌多样性增多。在细菌优势菌门中,酸杆菌门相对丰度显著增加,变形菌门与放线菌门相对丰度显著降低;真菌优势菌门相对丰度无显著变化。土壤酸性减弱,有机质含量随休耕年限增加呈现递减模式,酚酸类物质中苯甲酸和水杨酸含量显著降低,而对香豆酸等逐渐积累。综上,太子参土壤休耕改善了土壤微生物的菌群结构、土壤性质,从而缓解了连作效应。     

长期施肥对土壤微生物量及土壤酶活性的影响

 该文以北京国家褐潮土土壤肥力与肥料效益长期监测基地的长期肥料定位试验为平台,研究了长期不同施肥制度对土壤的生物学特性及其土壤酶的影响。主要研究结果：长期撂荒土壤(15年)的有机质和全氮(TN)的含量、微生物量碳(SMB-C)和氮(SMB-N)、土壤的蔗糖酶、磷酸酶和脲酶活性以及SMB-C/SOC(土壤有机碳)和SMB-N/TN比值都高于种植作物的农田土壤;而其代谢商和容重值低于农田土壤。长期施肥的农田(NPK、NPKM 、NPKS和NPKF),其土壤养分含量、微生物量碳和氮以及土壤蔗糖酶、磷酸酶和脲酶活性均高于不施肥的农田(CK);而小麦(Triticum aestivum)-玉米(Zea mays)→小麦-大豆(Glycine max)复种轮作(NPKF)的农田又高于长期复种连作(NPK)的农田;在施肥处理中(NPK、NPKM、NPKS和NPKF),长期化肥与有机肥配合施用的处理(NPKM )的土壤上述指标高于其它施肥处理(NPK、NPKS和NPKF),但其土壤的代谢商、pH值和容重值较低。     

Ecoenzymatic stoichiometry of recalcitrant organic matter decomposition: the growth rate hypothesis in reverse

The flow of carbon and nutrients from plant production into detrital food webs is mediated by microbial enzymes released into the environment (ecoenzymes). Ecoenzymatic activities are linked to both microbial metabolism and environmental resource availability. In this paper, we extend the theoretical and empirical framework for ecoenzymatic stoichiometry from nutrient availability to carbon composition by relating ratios of ??-1,4-glucosidase (BG), acid (alkaline) phosphatase (AP), ??-N-acetylglucosaminidase (NAG), leucine aminopeptidase (LAP) and phenol oxidase (POX) activities in soils to measures of organic matter recalcitrance, using data from 28 ecosystems. BG and POX activities are uncorrelated even though both are required for lignocellulose degradation. However, the ratio of BG:POX activity is negatively correlated with the relative abundance of recalcitrant carbon. Unlike BG, POX activity is positively correlated with (NAG + LAP) and AP activities. We propose that the effect of organic matter recalcitrance on microbial C:N and C:P threshold element ratios (TER) can be represented by normalizing BG, AP and (NAG + LAP) activities to POX activity. The scaling relationships among these ratios indicate that the increasing recalcitrance of decomposing organic matter effectively reverses the growth rate hypothesis of stoichiometric theory by decreasing carbon and nutrient availability and slowing growth, which increases TER_N:P. This effect is consistent with the narrow difference between the mean elemental C:N ratios of soil organic matter and microbial biomass and with the inhibitory effect of N enrichment on rates of decomposition and microbial metabolism for recalcitrant organic matter. From these findings, we propose a conceptual framework for bottom-up decomposition models that integrate the stoichiometry of ecoenzymatic activities into general theories of ecology.     

Zones of influence for soil organic matter dynamics: A conceptual framework for data and models

Soil organic matter (SOM) is an indicator of sustainable land management as stated in the global indicator framework of the United Nations Sustainable Development Goals (SDG Indicator 15.3.1). Improved forecasting of future changes in SOM is needed to support the development of more sustainable land management under a changing climate. Current models fail to reproduce historical trends in SOM both within and during transition between ecosystems. More realistic spatio‐temporal SOM dynamics require inclusion of the recent paradigm shift from SOM recalcitrance as an ‘intrinsic property’ to SOM persistence as an ‘ecosystem interaction’. We present a soil profile, or pedon‐explicit, ecosystem‐scale framework for data and models of SOM distribution and dynamics which can better represent land use transitions. Ecosystem‐scale drivers are integrated with pedon‐scale processes in two zones of influence. In the upper vegetation zone, SOM is affected primarily by plant inputs (above‐ and belowground), climate, microbial activity and physical aggregation and is prone to destabilization. In the lower mineral matrix zone, SOM inputs from the vegetation zone are controlled primarily by mineral phase and chemical interactions, resulting in more favourable conditions for SOM persistence. Vegetation zone boundary conditions vary spatially at landscape scales (vegetation cover) and temporally at decadal scales (climate). Mineral matrix zone boundary conditions vary spatially at landscape scales (geology, topography) but change only slowly. The thicknesses of the two zones and their transport connectivity are dynamic and affected by plant cover, land use practices, climate and feedbacks from current SOM stock in each layer. Using this framework, we identify several areas where greater knowledge is needed to advance the emerging paradigm of SOM dynamics—improved representation of plant‐derived carbon inputs, contributions of soil biota to SOM storage and effect of dynamic soil structure on SOM storage—and how this can be combined with robust and efficient soil monitoring.     

Multiple models and experiments underscore large uncertainty in soil carbon dynamics

Soils contain more carbon than plants or the atmosphere, and sensitivities of soil organic carbon (SOC) stocks to changing climate and plant productivity are a major uncertainty in global carbon cycle projections. Despite a consensus that microbial degradation and mineral stabilization processes control SOC cycling, no systematic synthesis of long-term warming and litter addition experiments has been used to test process-based microbe-mineral SOC models. We explored SOC responses to warming and increased carbon inputs using a synthesis of 147 field manipulation experiments and five SOC models with different representations of microbial and mineral processes. Model projections diverged but encompassed a similar range of variability as the experimental results. Experimental measurements were insufficient to eliminate or validate individual model outcomes. While all models projected that CO₂ efflux would increase and SOC stocks would decline under warming, nearly one-third of experiments observed decreases in CO₂ flux and nearly half of experiments observed increases in SOC stocks under warming. Long-term measurements of C inputs to soil and their changes under warming are needed to reconcile modeled and observed patterns. Measurements separating the responses of mineral-protected and unprotected SOC fractions in manipulation experiments are needed to address key uncertainties in microbial degradation and mineral stabilization mechanisms. Integrating models with experimental design will allow targeting of these uncertainties and help to reconcile divergence among models to produce more confident projections of SOC responses to global changes.     

The effects of chronic nitrogen fertilization on alpine tundra soil microbial communities: implications for carbon and nitrogen cycling

Many studies have shown that changes in nitrogen (N) availability affect primary productivity in a variety of terrestrial systems, but less is known about the effects of the changing N cycle on soil organic matter (SOM) decomposition. We used a variety of techniques to examine the effects of chronic N amendments on SOM chemistry and microbial community structure and function in an alpine tundra soil. We collected surface soil (0-5 cm) samples from five control and five long-term N-amended plots established and maintained at the Niwot Ridge Long-term Ecological Research (LTER) site. Samples were bulked by treatment and all analyses were conducted on composite samples. The fungal community shifted in response to N amendments, with a decrease in the relative abundance of basidiomycetes. Bacterial community composition also shifted in the fertilized soil, with increases in the relative abundance of sequences related to the Bacteroidetes and Gemmatimonadetes, and decreases in the relative abundance of the Verrucomicrobia. We did not uncover any bacterial sequences that were closely related to known nitrifiers in either soil, but sequences related to archaeal nitrifiers were found in control soils. The ratio of fungi to bacteria did not change in the N-amended soils, but the ratio of archaea to bacteria dropped from 20% to less than 1% in the N-amended plots. Comparisons of aliphatic and aromatic carbon compounds, two broad categories of soil carbon compounds, revealed no between treatment differences. However, G-lignins were found in higher relative abundance in the fertilized soils, while proteins were detected in lower relative abundance. Finally, the activities of two soil enzymes involved in N cycling changed in response to chronic N amendments. These results suggest that chronic N fertilization induces significant shifts in soil carbon dynamics that correspond to shifts in microbial community structure and function.     

Perennial Grass Bioenergy Cropping on Wet Marginal Land: Impacts on Soil Properties,Soil Organic Carbon,and Biomass During Initial Establishment

The control of soil moisture, vegetation type, and prior land use on soil health parameters of perennial grass cropping systems on marginal lands is not well known. A fallow wetness-prone marginal site in New York (USA) was converted to perennial grass bioenergy feedstock production. Quadruplicate treatments were fallow control, reed canarygrass (Phalaris arundinaceae L. Bellevue) with nitrogen (N) fertilizer (75 kg N ha^?1), switchgrass (Panicum virgatum L. Shawnee), and switchgrass with N fertilizer (75 kg N ha^?1). Based on periodic soil water measurements, permanent sampling locations were assigned to various wetness groups. Surface (0–15 cm) soil organic carbon (SOC), active carbon, wet aggregate stability, pH, total nitrogen (TN), root biomass, and harvested aboveground biomass were measured annually (2011–2014). Multi-year decreases in SOC, wet aggregate stability, and pH followed plowing in 2011. For all years, wettest soils had the greatest SOC and active carbon, while driest soils had the greatest wet aggregate stability and lowest pH. In 2014, wettest soils had significantly (p?<?0.0001) greater SOC and TN than drier soils, and fallow soils had 14 to 20% greater SOC than soils of reed canarygrass + N, switchgrass, and switchgrass + N. Crop type and N fertilization did not result in significant differences in SOC, active carbon, or wet aggregate stability. Cumulative 3-year aboveground biomass yields of driest switchgrass + N soils (18.8 Mg ha^?1) were 121% greater than the three wettest switchgrass (no N) treatments. Overall, soil moisture status must be accounted for when assessing soil dynamics during feedstock establishment.     

Shrub-encroachment induced alterations in input chemistry and soil microbial community affect topsoil organic carbon in an Inner Mongolian grassland

Shrub encroachment frequently occurs in arid and semi-arid grasslands worldwide and affects the regional carbon balance. Many previous studies have revealed the effects of shrub encroachment on bulk carbon content of grasslands, but molecular evidence is surprisingly lacking. In this study, we examined the chemical composition of plant tissues and soil organic carbon (SOC), and soil microbial communities to identify the effects of shrub (Caragana microphylla) encroachment on SOC storage in the top layer (0–10 cm) along a gradient of natural shrub cover in the grasslands of Inner Mongolia. We found that SOC in the shrub patches was derived mainly from leaves, whereas SOC in the grassy matrix was composed of a mixture of fresh root- and leaf-derived compounds. Compared with pure grassland, the SOC decreased by 29% in the shrub-encroached grasslands (SEGs), and this decrease was enhanced by increasing shrub cover. We also found that free lipids and lignin-derived phenols increased while the ratios of ω-C₁₈/∑C₁₈ and suberin/cutin decreased with increasing shrub cover. In addition, the ratios of fungal to bacterial phospholipid fatty acids (PLFAs) and gram-negative to gram-positive bacterial PLFAs decreased with increasing shrub cover. These results indicate that the encroachment of nitrogen-rich legume shrubs can lead to carbon loss by altering the chemical composition of plant inputs as well as the soil microbial community in grassland ecosystems.     

A new approach to estimating the pool of stable organic matter in soil using data from long-term field experiments

It is a necessity to have a successful method to separate, quantify and define the active and passive soil organic matter pools for appropriate verification of models. In this study, the organic carbon content of long-term bare fallow soils was used as an indicator of the size of the stable soil organic matter pool. Although soil texture and soil structure are widely accepted as having an influence on the stable pool, most soil organic models neglect the relationship between soil structure and carbon stabilization. Therefore, the aim of this presentation is to estimate the size of the stable carbon pool and to relate it to soil texture and structure properties. It was calculated that over 50 yr, under bare fallow conditions, the relative decrease in the amount of carbon (C) for the most stable pools ranged between 2 and 12%. In comparison, for the less stabilized pools the relative decrease was calculated from 50 to 100%. This indicates that the organic carbon content of long-term bare fallow soils should be very similar to the size of the most stable C pool. We also observed that the amounts of carbon associated with primary particles <20 μm for numerous soils with contrasting carbon content, soil texture, and management practices showed a lower and an upper limit. Both these limits and the carbon content of long-term bare fallow soils (which were assumed to be similar to the size of the stable pool) were related to the content of primary particles <20 μm in the soil. To calculate these relationships, an equation was used including one term to describe the influence of soil texture and another to describe that of soil structure. The calculated regression for the bare fallow soils corresponded very well to the lower limit of carbon content associated with primary particles <20 μm. The upper limit was estimated only by increasing the regression parameter which is related to the amount of C per unit primary particles <20 μm. Considering the many published results of the influence of soil texture and structure on carbon stabilization processes in soil, the stable pool may be defined as the capacity of soils to sorb C. The upper limit of carbon content associated with primary particles <20 μm may be interpreted as the capacity of soil to protect C. This revised version was published online in June 2006 with corrections to the Cover Date. This revised version was published online in June 2006 with corrections to the Cover Date. This revised version was published online in June 2006 with corrections to the Cover Date.     

Relating microbial community structure to functioning in forest soil organic carbon transformation and turnover

Forest soils store vast amounts of terrestrial carbon, but we are still limited in mechanistic understanding on how soil organic carbon (SOC) stabilization or turnover is controlled by biotic and abiotic factors in forest ecosystems. We used phospholipid fatty acids (PLFAs) as biomarker to study soil microbial community structure and measured activities of five extracellular enzymes involved in the degradation of cellulose (i.e., β‐1,4‐glucosidase and cellobiohydrolase), chitin (i.e., β‐1,4‐N‐acetylglucosaminidase), and lignin (i.e., phenol oxidase and peroxidase) as indicators of soil microbial functioning in carbon transformation or turnover across varying biotic and abiotic conditions in a typical temperate forest ecosystem in central China. Redundancy analysis (RDA) was performed to determine the interrelationship between individual PFLAs and biotic and abiotic site factors as well as the linkage between soil microbial structure and function. Path analysis was further conducted to examine the controls of site factors on soil microbial community structure and the regulatory pathway of changes in SOC relating to microbial community structure and function. We found that soil microbial community structure is strongly influenced by water, temperature, SOC, fine root mass, clay content, and C/N ratio in soils and that the relative abundance of Gram‐negative bacteria, saprophytic fungi, and actinomycetes explained most of the variations in the specific activities of soil enzymes involved in SOC transformation or turnover. The abundance of soil bacterial communities is strongly linked with the extracellular enzymes involved in carbon transformation, whereas the abundance of saprophytic fungi is associated with activities of extracellular enzymes driving carbon oxidation. Findings in this study demonstrate the complex interactions and linkage among plant traits, microenvironment, and soil physiochemical properties in affecting SOC via microbial regulations.     

Changes in Bacterial Community Structure of Agricultural Land Due to Long-Term Organic and Chemical Amendments

Community level physiological profiling and pyrosequencing-based analysis of the V1-V2 16S rRNA gene region were used to characterize and compare microbial community structure, diversity, and bacterial phylogeny from soils of chemically cultivated land (CCL), organically cultivated land (OCL), and fallow grass land (FGL) for 16 years and were under three different land use types. The entire dataset comprised of 16,608 good-quality sequences (CCL, 6,379; OCL, 4,835; FGL, 5,394); among them 12,606 sequences could be classified in 15 known phylum. The most abundant phylum were Proteobacteria (29.8%), Acidobacteria (22.6%), Actinobacteria (11.1%), and Bacteroidetes (4.7%), while 24.3% of the sequences were from bacterial domain but could not be further classified to any known phylum. Proteobacteria, Bacteroidetes, and Gemmatimonadetes were found to be significantly abundant in OCL soil. On the contrary, Actinobacteria and Acidobacteria were significantly abundant in CCL and FGL, respectively. Our findings supported the view that organic compost amendment (OCL) activates diverse group of microorganisms as compared with conventionally used synthetic chemical fertilizers. Functional diversity and evenness based on carbon source utilization pattern was significantly higher in OCL as compared to CCL and FGL, suggesting an improvement in soil quality. This abundance of microbes possibly leads to the enhanced level of soil organic carbon, soil organic nitrogen, and microbial biomass in OCL and FGL soils as collated with CCL. This work increases our current understanding on the effect of long-term organic and chemical amendment applications on abundance, diversity, and composition of bacterial community inhabiting the soil for the prospects of agricultural yield and quantity of soil.     

Organic matter properties in soils afforested with Pinus radiata

Aims

Afforestation causes important alterations in SOM content and composition that affect the soil functions and C balance. The aim of this study was to identify the mechanisms that determine the changes in SOM composition following afforestation of grasslands.

Methods

The study included 4 chronosequences and 5 paired plots comprising pastures and land afforested with Pinus radiata. The SOM was characterized by ¹³C CP-MAS NMR spectroscopy and differential scanning calorimetry.

Results

During the first 10–20 year after afforestation, the changes in SOM content varied from slight gains to large losses (>40 %). The analyses revealed that even SOM compounds considered resistant to decomposition were degraded during this time. The SOM gains, observed 20 year after stand establishment, were favoured by the higher recalcitrance of pine litter and possibly by soil acidification. The concentrations of most SOM compounds, particularly the stable compounds, were higher at the end of the rotation. The low degree of protection, along with the favourable climatic conditions, may also explain the rapid decomposition of SOM, including resistant compounds, in these soils. DSC analysis complemented the information about SOM composition provided by other techniques.

Conclusions

The accumulation of stable SOM compounds at the end of the rotation suggests a longer soil C turnover in these afforested soils, which may alleviate the gradual loss of SOC in intensively managed forest soils.