Odor Perception Phenotypes: Multiple, Specific Hyperosmias to Musks

Olfactory detection thresholds for 11 structurally diverse muskodorants and one non-musk odorant were obtained from 32 subjects.Hierarchical cluster analysis produced four groups of subjects.One group (n = 12) was uniformly sensitive to all musks; another(n = 16) was uniformly insensitive. Two groups of subjects containedotherwise insensitive individuals who were exceptionally sensitiveto cyclopentadecanone and musk xylol (n = 2) and to delta9-hexadecenolactoneand tonalid (n = 2) respectively. We propose that the lattertwo groups are odor perception phenotypes (MSHM1 and MSHM2)that consist of multiple, specific hyperosmias to musk odorants.Chem. Senses 21: 411– 416, 1996. ¹Present address: Synesthetics, Inc., Montclair, NJ 07043, USA     

Olfactory sensitivity to food odor components in the short-tailed fruit bat,Carollia perspicillata (phyllostomatidae,chiroptera)

Summary The absolute olfactory sensitivity in a frui-teating bat, Carollia perspicillata, was investigated. Eighteen monomolecular food odor components from 3 substance classes were tested using a sniff rate analysis method. Detection thresholds (Table 1) ranged from 3.6 · 10¹³ to 2.7 · 10¹⁰ molecules/cm³ air. Interindividual variation (N = 4) for a substance did not exceed one order of magnitude. Significant correlations between olfactory performance and carbon chain length of the odor molecule were found for two substance classes: Sensitivity to the aliphatic iso-alcohols increased linearly from C₂ to C₅, and a nonlinear correlation was found for the acetic esters, with the C₄- and C₇-forms being clearly better perceived than the other homologues. In acetic esters, the sensitivity for the n-forms of the molecule was significantly higher than for the iso-forms. No such correlation between stereo-isomers and olfactory perception was found for the n- and iso-forms of carbon acids and aliphatic alcohols. Fruit-typical odor components like ethyl butyrate (5.4 · 10¹⁰), n-pentyl acetate (2.8 · 10¹⁰), or linalool (1.8 · 10¹¹ molecules/cm³ air) were the most effective among all compounds tested, suggesting that the nutritional specialization of the bat may be associated with a specific spectrum of olfactory sensitivity.     

The number of functional olfactory receptor genes and the relative size of olfactory brain structures are poor predictors of olfactory discrimination performance with enantiomers

The ability of four squirrel monkeys and three pigtail macaques to distinguish between nine enantiomeric odor pairs sharing an isopropenyl group at the chiral center was investigated in terms of a conditioning paradigm. All animals from both species were able to discriminate between the optical isomers of limonene, carvone, dihydrocarvone, dihydrocarveole and dihydrocarvyl acetate, whereas they failed to distinguish between the (+)- and (-)-forms of perillaaldehyde and limonene oxide. The pigtail macaques, but not the squirrel monkeys, also discriminated between the antipodes of perillaalcohol and isopulegol. A comparison of the across-task patterns of discrimination performance shows a high degree of similarity among the two primate species and also between these nonhuman primates and human subjects tested in an earlier study on the same tasks. These findings suggest that between-species comparisons of the relative size of olfactory brain structures or of the number of functional olfactory receptor genes are poor predictors of olfactory discrimination performance with enantiomers.     

Polyploidy and Evolution in Wild and CultivatedDahliaSpecies

Observations on the chromosomes of nine species ofDahliaCav.(Asteraceae, Heliantheae—Coreopsidinae) show that somehave 2n=32, others 2n=64, with a third group having both chromosomenumbers in the same taxon. Karyotype investigations showed thatthe chromosomes can be divided into groups of 14 metacentricsplus two submetacentrics per set of 16 chromosomes.In situhybridizationusing an rRNA gene probe indicated that the 2n=32 species haveeight hybridization sites whilst the 2n=64 species have 16 sites.Silver nitrate staining of these regions showed that not allof these nucleolar organizers are active. Meiotic analysis atmetaphase I and pachytene, by synaptonemal complex spreading,shows that the 2n=32 species have exclusive bivalent formationwhereas the 2n=64 species have small numbers of univalents plusquadrivalents in addition to bivalents. This study proposesthatDahliaspecies with 2n=32 are allotetraploids whereas thosespecies and chromosome races with 2n=64 are their autopolyploidderivatives. We suggest that a bivalent-promoting mechanismin the 2n=32 species may account for their meiotic behaviouras their component genomes appear so similar, and that thismechanism is also responsible for the low number of quadrivalentsin the 2n=64 taxa.Copyright 1998 Annals of Botany Comapny Chromosome pairing,Dahlia, in situhybridization, karyotype analysis, polyploidy, synaptonemal complex analysis     

Olfactory sensitivity for aliphatic aldehydes in squirrel monkeys and pigtail macaques

Using a conditioning paradigm, the olfactory sensitivity of three squirrel monkeys and three pigtail macaques for a homologous series of aliphatic aldehydes ( n-butanal to n-nonanal) was assessed. With only few exceptions, the animals of both species significantly discriminated concentrations below 1 ppm from the odorless solvent, and with n-butanal and n-hexanal individual pigtail macaques even demonstrated thresholds below 1 ppb. The results showed (1). both primate species to have a well-developed olfactory sensitivity for aliphatic aldehydes, (2). pigtail macaques to generally perform better than squirrel monkeys in detecting members of this class of odorants, and (3). no significant correlation between perceptibility in terms of olfactory detection thresholds and carbon chain length of the aliphatic aldehydes in both species tested. These findings lend further support to the growing body of evidence suggesting that between-species comparisons of the number of functional olfactory receptor genes or of neuroanatomical features are poor predictors of olfactory performance. Further, our findings suggest that olfaction may play an important and hitherto underestimated role in the regulation of behavior in the species tested.     

Compressed suffix tree--a basis for genome-scale sequence analysis

Summary: Suffix tree is one of the most fundamental data structuresin string algorithms and biological sequence analysis. Unfortunately,when it comes to implementing those algorithms and applyingthem to real genomic sequences, often the main memory size becomesthe bottleneck. This is easily explained by the fact that whilea DNA sequence of length n from alphabet = {A, C, G, T } canbe stored in n log ||= 2n bits, its suffix tree occupies O(nlog n) bits. In practice, the size difference easily reachesfactor 50. We provide an implementation of the compressed suffix tree veryrecently proposed by Sadakane (Theory of Computing Systems,in press). The compressed suffix tree occupies space proportionalto the text size, i.e. O(n log} | |) bits, and supports alltypical suffix tree operations with at most log n factor slowdown.Our experiments show that, e.g. on a 10 MB DNA sequence, thecompressed suffix tree takes 10% of the space of normal suffixtree. Typical operations are slowed down by factor 60. Availability: The C++ implementation under GNU license is availableat http://www.cs.helsinki.fi/group/suds/cst/. An example programimplementing a typical pattern discovery task is included. Experimentalresults in this note correspond to version 0.95. Contact: vmakinen{at}cs.helsinki.fi     

Inhibition of oyster drill chemotaxis

A bioassay was developed by Rittschof el al. (1983) to examinedistance chemoreception in the predatory marine gastropod, Urosalpinxcinerea. This bioassay was used to test the effect of a senesof low mol. wt. organics on the ability of newly hatched oysterdrills to detect a prey odor released from barnacles, Balanusbalanoides. Two series of low mol. wt. organics were testedusing methanol as the reference compound. In one series, R-OH,the carbon chain length was varied from 1 to 4. In the secondseries, CH³-R, the chain length was held constant while thefunctional group, R, was varied. When these compounds were presentin the rnM range, they inhibited the creeping response of oysterdrills towards barnacle prey odor. In the CH₃-R series, inhibitionincreased in the following order: sodium acetate > ethylacetate > acetonitnle > methanol; and, in the alcoholseries C₁ to C₄, inhibition increased with increasing chainlength. No creeping response was observed when these compoundswere tested in the absence of prey odor.     

Individual differences in thresholds and quality reports of human subjects to various odors

Sixty-three subjects were selected on the basis of their relativeability (n = 30) or inability (n = 33) to detect the intenseurine–sweaty odor of the diastereoisomeric ketone, cis-4-(4'-t-butylcyclohexyl)-4-methyl-2-pentanone (pemenone). Absolute thresholds were determined,and quality reports and hedonic ratings were obtained for near-thresholdconcentrations of pemenone and five other odorous compounds.Several of these compounds were selected because large individualdifferences in sensitivity (specific anosmias) were known toexist. A principal compound analysis of threshold concentrationsindicated that three orthogonal factors well described the relationshipsbetween sensitivities to the compounds. Threshold concentrationsof pemenone and androstenone were highly correlated and thefirst factor was defined by relationships between those odorantsand isovaleric acid, all modally putrid-smelling compounds.Subjects relatively osmic for pemenone generally reported aputrid odor for pemenone, but anosmics reported mostly otherqualities. These relationships between relative sensitivityand the quality reports elicited by the different compoundsare consistent with a multiple-profile model of odor qualityperception. That model postulates that most odor molecules interactwith more than one perceptual channel (receptor process) andthat any individual alteration in the relative specificity ordeletion in the number of such receptor processes could alterthe pattern of interaction and thus should give rise to alterationsin the quality or intensity of the resulting odor perception.     

Pemenone and Androstenone do not Cross-adapt Reciprocally

Explorations of the qualitative and quantitative differencesbetween the odors of pemenone (PEM), androstenone (AND) andisovaleric acid (IVA) show that they share a number of commonperceptual characteristics. Among these are similarities intheir odor quality and relative intensity ratings. PEM is alsoan efficient cross-adaptor and modulator of a subject's ANDsensitivity. Here we evaluate the reciprocal efficacy of ANDadaptation to alter the perceived intensity and quality of PEM,IVA and AND. Twenty-three people, including both those osmicand allosmic (n = 11) for the putrid odor quality of PEM, weretested. Following training in odor quality and intensity ratingtechniques, subjects sampled a selected substance for 2 minto obtain adaptation and then reported quality and intensityratings for the three test stimuli. There was significant self-adaptationby PEM and IVA in all subjects, but self-adaptation by AND wasonly observed in the PEM-osmic subjects. AND did not cross-adaptPEM or IVA to any significant extent. Collectively, these resultscontrast with our earlier study in which PEM was an efficientcross-adaptor of AND. Here, AND was no more efficient than thecontrol as an adapting substance for PEM, despite significantself-adaptation of PEM by itself. This lack of reciprocity inthe effectiveness of PEM and AND as cross-adapters is not relatedto differences in odor intensity, as the PEM and AND concentrationswere adjusted for each subject to elicit comparable intensityreports. These results support the notion that PEM, AND andIVA share certain perceptual characteristics, but interact differentiallywith three or more sets of perceptual channels that are nowthought to result in a putrid odor quality. Chem. Senses 21:711–717, 1996.     

Determination of airway and tissue resistances after antigen and methacholine in nonhuman primates

Madwed, Jeffrey B., and Andrew C. Jackson.Determination of airway and tissue resistances after antigen andmethacholine in nonhuman primates. J. Appl.Physiol. 83(5): 1690-1696, 1997.Antigen challenge of Ascaris suum-sensitiveanimals has been used as a model of asthma in humans. However, noreports have separated total respiratory resistance into airway (Raw)and tissue (Rti) components. We compared input impedance (Zin) andtransfer impedance (Ztr) to determine Raw and Rti in anesthetizedcynomolgus monkeys under control and bronchoconstricted conditions. Zindata between 1 and 64 Hz are frequency dependent during baselineconditions, and this frequency dependence shifts in response toA. suum or methacholine. Thus itcannot be modeled with the DuBois model, and estimates of Raw and Rticannot be determined. With Ztr, baseline data were much less variablethan Zin in all monkeys. After bronchial challenge withA. suum or methacholine, the absoluteamplitude of the resistive component of Ztr increased and its zerocrossing shifted to higher frequencies. These data can estimate Raw and Rti with the six-element DuBois model. Therefore, in monkeys, Ztr hasadvantages over other measures of lung function, since it provides amethodology to separate estimates of Raw and Rti. In conclusion, Ztrshows spectral features similar to those reported in healthy andasthmatic humans.

     

Effects of Calmodulin Antisense Oligonucleotides on Chemoresponse in Paramecium

The calcium/calmodulin-regulated Ca-ATPase of the plasma membraneis implicated in Paramecium chemosensory transduction. Calmodulinantisense oligonucleotides electroporated into Paramecium disruptchemosensory responses to sodium acetate but not to ammoniumchloride. Chem. Senses 21: 55–58, 1996.     

Effect of Increased Yeast Alcohol Acetyltransferase Activity on Flavor Profiles of Wine and Distillates

The distinctive flavor of wine, brandy, and other grape-derived alcoholic beverages is affected by many compounds, including esters produced during alcoholic fermentation. The characteristic fruity odors of the fermentation bouquet are primarily due to a mixture of hexyl acetate, ethyl caproate (apple-like aroma), iso-amyl acetate (banana-like aroma), ethyl caprylate (apple-like aroma), and 2-phenylethyl acetate (fruity, flowery flavor with a honey note). The objective of this study was to investigate the feasibility of improving the aroma of wine and distillates by overexpressing one of the endogenous yeast genes that controls acetate ester production during fermentation. The synthesis of acetate esters by the wine yeast Saccharomyces cerevisiae during fermentation is ascribed to at least three acetyltransferase activities, namely, alcohol acetyltransferase (AAT), ethanol acetyltransferase, and iso-amyl AAT. To investigate the effect of increased AAT activity on the sensory quality of Chenin blanc wines and distillates from Colombar base wines, we have overexpressed the alcohol acetyltransferase gene (ATF1) of S. cerevisiae. The ATF1 gene, located on chromosome XV, was cloned from a widely used commercial wine yeast strain of S. cerevisiae, VIN13, and placed under the control of the constitutive yeast phosphoglycerate kinase gene (PGK1) promoter and terminator. Chromoblot analysis confirmed the integration of the modified copy of ATF1 into the genome of three commercial wine yeast strains (VIN7, VIN13, and WE228). Northern blot analysis indicated constitutive expression of ATF1 at high levels in these yeast transformants. The levels of ethyl acetate, iso-amyl acetate, and 2-phenylethyl acetate increased 3- to 10-fold, 3.8- to 12-fold, and 2- to 10-fold, respectively, depending on the fermentation temperature, cultivar, and yeast strain used. The concentrations of ethyl caprate, ethyl caprylate, and hexyl acetate only showed minor changes, whereas the acetic acid concentration decreased by more than half. These changes in the wine and distillate composition had a pronounced effect on the solvent or chemical aroma (associated with ethyl acetate and iso-amyl acetate) and the herbaceous and heads-associated aromas of the final distillate and the solvent or chemical and fruity or flowery characters of the Chenin blanc wines. This study establishes the concept that the overexpression of acetyltransferase genes such as ATF1 could profoundly affect the flavor profiles of wines and distillates deficient in aroma, thereby paving the way for the production of products maintaining a fruitier character for longer periods after bottling.     

Psychophysical and Psychohedonic Functions of Four Common Food Flavours in Elderly Subjects

This study was designed to determine the cause of potentialdifferences in optimal preferred flavour concentrations in fourcommon food items between young and elderly subjects. The mainobjective was to investigate whether the differences in concentration-pleasantnessfunctions could be attributed to differences in concentration-intensity(psychophysical) functions, or to differences in intensity-pleasantness(psychohedonic) functions. Groups of elderly subjects (n = 31)and young subjects (n = 25) judged four series of food items(bouillon, tomato soup, chocolate custard and orange lemonade),each with five geometrically spaced flavour concentration levels.In addition, all participants judged a series of grey surfacesas a reference series. Stimuli were judged on a 10-point scalewith respect to perceived intensity and pleasantness. The resultsshowed that the responses to the various stimuli in the seriesof grey surfaces were almost equivalent for young and elderlysubjects. The older subjects had higher optimal flavour concentrationsthan young subjects for each of the four food items. The differencescould be attributed to differences in both psychophysical andpsychohedonic functions for all four flavours. However, changesin psychohedonic functions were less pronounced for the savouryflavours than for the sweet flavours. The higher optimal preferredflavour concentration level for the elderly could be partlyexplained by the phenomenon that the elderly need higher concentrationlevels than young subjects in order to obtain a similar perceivedintensity level. Chem. Senses, 21: 293ndash;302, 1996.     

Oxidation of lactate and acetate in rat skeletal muscle: analysis by 13C-nuclear magnetic resonance spectroscopy

Bertocci, Loren A., John G. Jones, Craig R. Malloy, RonaldG. Victor, and Gail D. Thomas. Oxidation of lactateand acetate in rat skeletal muscle: analysis by¹³C-nuclear magnetic resonancespectroscopy. J. Appl. Physiol. 83(1): 32-39, 1997.The balance between carbohydrate and fatty acidutilization in skeletal muscle previously has been studied in vivo byusing a variety of methods such as arteriovenous concentrationdifferences and radioactive isotope tracer techniques. However, thesemethodologies provide only indirect estimates of substrate oxidation.We used ¹³C-nuclear magneticresonance (NMR) spectroscopy and non-steady-state isotopomer analysisto directly quantify the relative oxidation of two competing exogenoussubstrates in rat skeletal muscles. We infused[1,2-¹³C]acetate and[3-¹³C]lactateintravenously in anesthetized rats during the final 30 min of 35 (n = 10) or 95 (n = 10) min of intense, unilateral, rhythmic hindlimb contractions.¹³C-NMR spectroscopy andisotopomer analysis were performed on extracts of gastrocnemius andsoleus muscles from both the contracting and contralateralresting hindlimbs. We found that1)[¹³C]lactate and[¹³C]acetate were taken up and oxidized by both restingand contracting skeletal muscles; and2) high-intensity musclecontractions altered the pattern of substrate utilization such that therelative oxidation of acetate decreased while that of lactate remainedunchanged or increased. Based on these findings, we propose that¹³C-NMR spectroscopy incombination with isotopomer analysis can be used to study the generaldynamics of substrate competition between carbohydrates and fats in ratskeletal muscle.

     

Loss of Olfactory Function Leads to a Decrease of Trigeminal Sensitivity

Healthy controls were compared to patients with decreased olfactorysensitivity (n = 32) to investigate interactions between theolfactory and trigeminal systems. Amplitudes of chemo-somatosensoryevent-related potentials in response to suprathreshold trigeminalstimuli (CO₂) were found to be smaller in patients (P<0.05)indicating a decrease of trigeminally mediated sensations. Chem.Senses 21: 75–79, 1996.     

Genetic Sensitivity to 6-n-Propylthiouracil (PROP) and Hedonic Responses to Bitter and Sweet Tastes

Genetically mediated sensitivity to the bitter taste of 6-n-propylthiouracil(PROP) has been associated with greater acuity for bitter andfor some sweet tastes. Thus far, few studies have explored therelationship between PROP taste sensitivity and hedonic responsesto bitter and sweet. In this study, 87 normal-weight young womenwere divided into PROP non-tasters (n = 18), regular tasters(n = 49), and supertasters (n = 20), based on their PROP detectionthresholds and the scaling of five suprathreshold solutionsof PROP and NaCl. Non-tasters had thresholds >1.8 x 10^–4mol/l PROP. Supertasters had thresholds <3.2 x 10^–5mol/l PROP and PROP/NaCl ratios >1.70. As expected, dislikeof the bitter taste of PROP was determined by its perceivedintensity, which was greater among supertasters than among regulartasters or non-tasters. Significant correlations were observedbetween PROP taste thresholds and the sum of intensity ratings(r = –0.61) and between summed intensity and summed hedonicratings (r = –0.80). PROP taste sensitivity was weaklylinked to enhanced perception of sweet taste, but did not predicthedonic responses to sucrose or to saccharin solutions. Giventhat the dislike of PROP solutions is determined by their perceivedintensity, hedonic responses to PROP solutions may provide arapid way of screening for PROP taster status. Chem. Senses22: 27–37, 1997.     

Modulation of myosin isoform expression by mechanical loading: role of stimulation frequency

Caiozzo, Vincent J., Michael J. Baker, and Kenneth M. Baldwin. Modulation of myosin isoform expression by mechanical loading: role of stimulation frequency. J. Appl.Physiol. 82(1): 211-218, 1997.This study testedthe hypothesis that mechanical loading, not stimulation frequency perse, plays a key role in determining the plasticity of myosin heavychain (MHC) protein isoform expression in muscle undergoing resistancetraining. Female Sprague-Dawley rats were randomly assigned toresistance-training programs that employed active1) shortening(n = 7) or2) lengthening contractions(n = 8). The medial gastrocnemius (MG)muscles in each group trained under loading conditions thatapproximated 90-95% of maximum isometric tetanictension but were stimulated at frequencies of 100 and~25 Hz, respectively. Lengthening and shortening contractions wereproduced by using a Cambridge ergometer system. The MG muscles trainedevery other day, performing a total of 16 training sessions. Bothtraining programs produced significant (P < 0.01) and similar reductions inthe fast type IIB MHC protein isoform in the white MG muscle, reducingits relative content to ~50% of the total MHC protein isoform pool.These changes were accompanied by increases in the relative content ofthe fast type IIX MHC protein isoform that were of similar magnitudefor both groups. The results of this study clearly demonstrate thatstimulation frequency does not play a key role in modulating MHCisoform alterations that result from high-resistance training.

     

Olfactory discrimination of aliphatic odorants at 1 ppm: too easy for CD-1 mice to show odor structure–activity relationships?

Using an operant conditioning paradigm we tested the ability of CD-1 mice to discriminate between 25 odorants comprising members of five homologous series of aliphatic odorants (C4-C8) presented at a gas phase concentration of 1 ppm. We found (a) that all mice significantly discriminated between all 50 stimulus pairs that involved odorants sharing the same functional group, but differing in carbon chain length, as well as between all 50 stimulus pairs that involved odorants sharing the same carbon chain length but differing in functional group, (b) a significant negative correlation between discrimination performance and structural similarity of odorants in terms of differences in carbon chain length with the acetic esters and the 2-ketones, but not with the 1-alcohols, n-aldehydes, and n-carboxylic acids tested, and (c) that odorant pairs differing in functional group were significantly better discriminated than odorant pairs differing in carbon chain length. These findings demonstrate that CD-1 mice have excellent discrimination ability for structurally related aliphatic odorants, that correlations between discrimination performance and structural similarity of odorants are odorant class-specific rather than a general phenomenon, and that both carbon chain length and type of functional group play an important role for odor quality coding in mice.     

Physiological adaptations to a weight-loss dietary regimen and exercise programs in women

Kraemer, William J., Jeff S. Volek, Kristine L. Clark, ScottE. Gordon, Thomas Incledon, Susan M. Puhl, N. Travis Triplett-McBride, Jeffrey M. McBride, Margot Putukian, and Wayne J. Sebastianelli. Physiological adaptations to a weight-loss dietary regimen andexercise programs in women. J. Appl.Physiol. 83(1): 270-279, 1997.Thirty-one women(mean age 35.4 ± 8.5 yr) who were overweight were matched andrandomly placed into either a control group (Con; n = 6), a diet-only group (D;n = 8), a diet+aerobic endurance exercise training group (DE; n = 9),or a diet+aerobic endurance exercise training+strength training group(DES; n = 8). After 12 wk, the threedietary groups demonstrated a significant(P  0.05) reduction in body mass,%body fat, and fat mass. No differences were observed in the magnitudeof loss among groups, in fat-free mass, or in resting metabolic rate.The DE and DES groups increased maximal oxygen consumption, and the DESgroup demonstrated increases in maximal strength. Weight loss resultedin a similar reduction in total serum cholesterol, low-densitylipoprotein cholesterol, and high-density lipoprotein cholesterol amongdietary groups. These data indicate that weight loss during moderatecaloric restriction is not altered by inclusion of aerobic oraerobic+resistance exercise, but diet in conjunction with training caninduce remarkable adaptations in aerobic capacity and muscular strengthdespite significant reductions in body mass.

     

Unequal group variances in microarray data analyses

Motivation: In searching for differentially expressed (DE) genesin microarray data, we often observe a fraction of the genesto have unequal variability between groups. This is not an issuein large samples, where a valid test exists that uses individualvariances separately. The problem arises in the small-samplesetting, where the approximately valid Welch test lacks sensitivity,while the more sensitive moderated t-test assumes equal variance. Methods: We introduce a moderated Welch test (MWT) that allowsunequal variance between groups. It is based on (i) weightingof pooled and unpooled standard errors and (ii) improved estimationof the gene-level variance that exploits the information fromacross the genes. Results: When a non-trivial proportion of genes has unequalvariability, false discovery rate (FDR) estimates based on thestandard t and moderated t-tests are often too optimistic, whilethe standard Welch test has low sensitivity. The MWT is shownto (i) perform better than the standard t, the standard Welchand the moderated t-tests when the variances are unequal betweengroups and (ii) perform similarly to the moderated t, and betterthan the standard t and Welch tests when the group variancesare equal. These results mean that MWT is more reliable thanother existing tests over wider range of data conditions. Availability: R package to perform MWT is available at http://www.meb.ki.se/~yudpaw Contact: yudi.pawitan{at}ki.se Supplementary information: Supplementary data are availableat Bioinformatics online. Associate Editor: Martin Bishop