Diversity and species composition of West African ungulate assemblages: effects of fire,climate and soil

Aim Anthropogenic fires are a major component of the ecology of rangelands throughout the world. To assess the effects of these fires on the diversity patterns of herbivores, we related gradients in fire occurrence, climate and soil fertility to patterns in alpha and beta diversity of African ungulates. Location West Africa. Methods We used a survey‐based approach for ungulates in 37 protected areas in desert, savanna and rain forest habitats throughout West Africa, combined with satellite images of fire occurrence and digital maps of actual evapotranspiration and soil fertility. Alpha diversity was related to the environmental variables using conventional and spatial regression models. We investigated beta diversity using partial Mantel tests and ordination techniques, and by partitioning the variance in assemblage composition into environmental and spatial components. Results The species richness of grazers showed a quadratic relationship with actual evapotranspiration, whereas that of browsers and frugivores showed a linear relationship. However, in the multiple regression models fire occurrence was the only variable that significantly correlated with the species richness of grazers. Soil fertility was weakly related to overall beta diversity and the species richness of browsers, but was non‐significant in the multiple regression models. Fire occurrence was the most important variable explaining species composition of the overall species set and of grazers, whereas the assemblage composition of browsers and frugivores was explained mostly by actual evapotranspiration. Main conclusions In contrast to previous studies, our analyses show that moisture and nutrients alone fail to adequately predict the diversity patterns of grazing ungulates. Rather, the species richness and assemblage composition of grazers are largely governed by anthropogenic fires that modify the quality and structure of the grass sward. Diversity patterns of browsers and frugivores are markedly different from grazers and depend mainly on the availability of moisture, which is positively correlated with the availability of foliage and fruits. Our study highlights the importance of incorporating major human‐induced disturbances or habitat alterations into analyses of diversity patterns.     

Spatial and temporal variation in species composition of dung beetle assemblages in southern Ireland

Abstract. 1. This study attempts to identify the main community characteristics that contribute to variability in dung beetle assemblage composition and structure across a range of spatial and temporal scales.
2. Dung beetle assemblages ( Aphodius , Sphaeridium, and Geotrupes species) were monitored by dung-baited pitfall trapping at 10-day intervals during the seasonally active period at eleven sites in southern Ireland. Three of the sites were monitored over at least 2 years between 1991 and 1996.
3. Although the species composition of the above taxonomic groups was comparable among sites and years, relative abundances of component species varied considerably. Detrended correspondence analysis ordinations indicated a similar level of variability in dung beetle assemblage structure among years, and among sites ≈1–180 km apart.
4. Processes that may contribute to spatio-temporal variability in dung beetle assemblages are discussed, and strategies for future research are suggested.     

Dung beetle assemblages on tropical land‐bridge islands: small island effect and vulnerable species

Aim Using dung beetles (Coleoptera: Scarabaeidae: Scarabaeinae) in a tropical land‐bridge island system, we test for the small island effect (SIE) in the species–area relationship and evaluate its effects on species richness and community composition. We also examine the determinants of species richness across island size and investigate the traits of dung beetle species in relation to their local extinction vulnerability following forest fragmentation. Location Lake Kenyir, a hydroelectric reservoir in north‐eastern Peninsular Malaysia. Methods We sampled dung beetles using human dung baited pitfall traps on 24 land‐bridge islands and three mainland sites. We used regression tree analyses to test for the SIE, as well as species traits related to local rarity, as an indication of extinction vulnerability. We employed generalized linear models (GLMs) to examine determinants for species richness at different scales and compared the results with those from conventional linear and breakpoint regressions. Community analyses included non‐metric multidimensional scaling, partial Mantel tests, nestedness analysis and abundance spectra. Results Regression tree analysis revealed an area threshold at 35.8 ha indicating an SIE. Tree basal area was the most important predictor of species richness on small islands (<35.8 ha). Results from GLMs supported these findings, with isolation and edge index also being important for small islands. The SIE also manifested in patterns of dung beetle community composition where communities on small islands (<35.8 ha) departed from those on the mainland and larger islands, and were highly variable with no significant nestedness, probably as a result of unexpected species occurrences on several small islands. The communities exhibited a low degree of spatial autocorrelation, suggesting that dispersal limitation plays a part in structuring dung beetle assemblages. Species with lower baseline density and an inability to forage on the forest edge were found to be rarer among sites and hence more prone to local extinction. Main conclusions We highlight the stochastic nature of dung beetle community composition on small islands and argue that this results in reduced ecosystem functionality. A better understanding of the minimum fragment size required for retaining functional ecological communities will be important for effective conservation management and the maintenance of tropical forest ecosystem stability.     

Fragment shape and tree species composition in tropical forests: a landscape level investigation

Fragmentation of tropical forest alters community composition as a result of changes in forest shape. This paper uses 22 hypotheses to test the effect of fragment shape on tree species composition in Ghana, West Africa, within biological categories of regeneration guild, rarity, phenology and dispersal. For both regenerating and mature trees, relationships between species composition and the shape of forest fragments were complex; almost half were significant but many failed to support the established hypotheses. Irregular shaped fragments had high proportions of regenerating, light‐demanding pioneers and mature, animal‐dispersed species. Species common to Ghana formed the foundation of communities in fragments of all shapes. Investigation at the landscape level indicated broad patterns of species change. Rigorous hypothesis testing is needed, following extensive demographic work on the ground, before population dynamics within tropical forest fragments can be comprehended fully and applied to conservation management.     

Growth strategies of tropical tree species: disentangling light and size effects

An understanding of the drivers of tree growth at the species level is required to predict likely changes of carbon stocks and biodiversity when environmental conditions change. Especially in species-rich tropical forests, it is largely unknown how species differ in their response of growth to resource availability and individual size. We use a hierarchical bayesian approach to quantify the impact of light availability and tree diameter on growth of 274 woody species in a 50-ha long-term forest census plot in Barro Colorado Island, Panama. Light reaching each individual tree was estimated from yearly vertical censuses of canopy density. The hierarchical bayesian approach allowed accounting for different sources of error, such as negative growth observations, and including rare species correctly weighted by their abundance. All species grew faster at higher light. Exponents of a power function relating growth to light were mostly between 0 and 1. This indicates that nearly all species exhibit a decelerating increase of growth with light. In contrast, estimated growth rates at standardized conditions (5 cm dbh, 5% light) varied over a 9-fold range and reflect strong growth-strategy differentiation between the species. As a consequence, growth rankings of the species at low (2%) and high light (20%) were highly correlated. Rare species tended to grow faster and showed a greater sensitivity to light than abundant species. Overall, tree size was less important for growth than light and about half the species were predicted to grow faster in diameter when bigger or smaller, respectively. Together light availability and tree diameter only explained on average 12% of the variation in growth rates. Thus, other factors such as soil characteristics, herbivory, or pathogens may contribute considerably to shaping tree growth in the tropics.     

Differences in volatile terpene composition between the bark and leaves of tropical tree species

Volatile terpenes are among the most diverse class of defensive compounds in plants, and they are implicated in both direct and indirect defense against herbivores. In terpenes, both the quantity and the diversity of compounds appear to increase the efficiency of defense as a diverse blend of compounds provides a more efficient protection against a broader range of herbivores and limits the chances that an enemy evolves resistance. Theory predicts that plant defensive compounds should be allocated differentially among tissues according to the value of the tissue, its cost of construction and the herbivore pressure on it. We collected volatile terpenes from bark and leaves of 178 individual tree belonging to 55 angiosperm species in French Guiana and compare the kind, amount, and diversity of compounds in these tissues. We hypothesized that in woody plants, the outermost part of the trunk should hold a more diverse blend of volatile terpenes. Additionally, as herbivore communities associated with the leaves is different to the one associated with the bark, we also hypothesized that terpene blends should be distinct in the bark vs. the leaves of a given species. We found that the mixture of volatile terpenes released by bark is different and more diverse than that released by leaves, both in monoterpenes and sesquiterpenes. This supports our hypothesis and further suggests that the emission of terpenes by the bark should be more important for trunk defense than previously thought.     

Landscape and area effects on beetle assemblages in Ontario

We compared beetles collected from eight forest fragments in a suburban-agricultural setting and one contiguous forest in south-central Ontario. Samples were collected by pan traps from the interior of continuous forest and upland deciduous forest fragments ranging in size from 43 to 2350 ha. The pooled sample was composed of 4561 individuals from 117 species. Differences in beetle assemblages was primarily due to variation in patch isolation, although actual fragment size had a significant effect on the abundance of native and forest specializing carabid species, and the amount of forest interior habitat had a significant effect on the total number of beetle species and ground beetle species richness (family Carabidae). Fragments which were less isolated on a local scale (within a 2 km radius) had a species composition most similar to that found in continuous forest, regardless of whether the actual forest area was small or large. Marked differences in abundance and biomass were also attributed to variation in the amount of local forest cover. We suggest that a reduction in patch isolation may be an appropriate conservation strategy to improve beetle diversity and abundance in fragmented landscapes.     

紫胶林-农田复合生态系统甲虫群落多样性

在云南绿春县牛孔乡采用网扫法调查了紫胶林-农田复合生态系统(LPFE)中稻田(Ⅰ)、旱地(Ⅱ)、天然紫胶林(Ⅲ)、人工紫胶林(Ⅳ)的甲虫群落.采集标本3569号,隶属26科358种;象甲科种类最丰富,占全部种类的17.0%;瓢虫科数量最丰富,占个体总数的22.9%.虎甲科、隐翅甲科等物种数和个体数量在Ⅰ～Ⅳ中的分布没有明显差异;而叩甲科、粗角叩甲科、朽木甲科、伪叶甲科、瓢虫科、天牛科、负泥虫科、叶甲科和象甲科等有明显差异.LPFE、Ⅰ、Ⅲ和Ⅳ甲虫物种多度分布符合对数级数模型,Ⅱ符合分割线段模型.Ⅰ～Ⅳ的甲虫多样性为:Ⅲ>Ⅳ>Ⅰ>Ⅱ.指出了栖息于植物上的甲虫群落能度量不同土地利用生境的区别,不同类群的甲虫对于生境的指示作用不同:叩甲等可以指示农田和林地的差异,而朽木甲、天牛、叶甲和象甲可以用于指示天然林和人工林生境的区别.LPFE具有区域内土地利用方式多样化的特点,对维持甲虫的多样性水平具有积极作用.Ⅲ在当地生物多样性保护中具有重要作用,Ⅱ在系统中具有很低的多样性.     

The effect of habitat fragmentation on the bee visitor assemblages of three Australian tropical rainforest tree species

Tropical forest loss and fragmentation can change bee community dynamics and potentially interrupt plant–pollinator relationships. While bee community responses to forest fragmentation have been investigated in a number of tropical regions, no studies have focused on this topic in Australia. In this study, we examine taxonomic and functional diversity of bees visiting flowers of three tree species across small and large rainforest fragments in Australian tropical landscapes. We found lower taxonomic diversity of bees visiting flowers of trees in small rainforest fragments compared with large forest fragments and show that bee species in small fragments were subsets of species in larger fragments. Bees visiting trees in small fragments also had higher mean body sizes than those in larger fragments, suggesting that small‐sized bees may be less likely to persist in small fragments. Lastly, we found reductions in the abundance of eusocial stingless bees visiting flowers in small fragments compared to large fragments. These results suggest that pollinator visits to native trees living in small tropical forest remnants may be reduced, which may in turn impact on a range of processes, potentially including forest regeneration and diversity maintenance in small forest remnants in Australian tropical countryside landscapes.     

Diversity of surface dwelling beetle assemblages in open-cast lignite mines in Central Germany

We investigated species richness of ground dwelling beetle assemblages in two non-reclaimed lignite mines and a dump in Central Germany by means of pitfall trapping. During a period of five months, a total of 203 beetle species within 27 families represented by 4099 individuals were trapped. This included 75 species of ground beetles represented in a sample of 957 individuals from which 10 species are regionally endangered. The number of individuals, species richness, as well as the proportions of endangered species did not differ between successional stages whereas species composition of sites could be related well to a set of environmental variables. High values of beta-diversity between sites indicated that the total number of species recorded is caused by habitat diversity. From the viewpoint of nature conservation, we conclude that postmining areas can play a key role in conservation of beetle diversity in agricultural areas since they harbour threatened species whose original habitats are now rare due to human impact. An important task for future management of postmining areas is to maintain successional processes and to prevent loss of habitat diversity through afforestation. Areas with extreme soil conditions should also be preserved for long-term availability of bare soil and pioneer vegetation and associated fauna.     

CpDNA-based species identification and phylogeography: application to African tropical tree species

Despite the importance of the African tropical rainforests as a hotspot of biodiversity, their history and the processes that have structured their biodiversity are understood poorly. With respect to past demographic processes, new insights can be gained through characterizing the distribution of genetic diversity. However, few studies of this type have been conducted in Central Africa, where the identification of species in the field can be difficult. We examine here the distribution of chloroplast DNA (cpDNA) diversity in Lower Guinea in two tree species that are difficult to distinguish, Erythrophleum ivorense and Erythrophleum suaveolens (Fabaceae). By using a blind-sampling approach and comparing molecular and morphological markers, we first identified retrospectively all sampled individuals and determined the limits of the distribution of each species. We then performed a phylogeographic study using the same genetic data set. The two species displayed essentially parapatric distributions that were correlated well with the rainfall gradient, which indicated different ecological requirements. In addition, a phylogeographic structure was found for E. suaveolens and, for both species, substantially higher levels of diversity and allelic endemism were observed in the south (Gabon) than in the north (Cameroon) of the Lower Guinea region. This finding indicated different histories of population demographics for the two species, which might reflect different responses to Quaternary climate changes. We suggest that a recent period of forest perturbation, which might have been caused by humans, favoured the spread of these two species and that their poor recruitment at present results from natural succession in their forest formations.     

Variations in dung beetle assemblages across a gradient of hunting in a tropical forest

Populations of large mammals are severely depleted by hunting in tropical forests, with direct effects on plant regeneration. But indirect consequences on commensal taxa depending on them for food resources, like coprophagous beetles, are less documented. Cascading effects of species loss across Scarabaeinae are expected, with likely significant negative implications for ecosystem functions. We examined dung beetle assemblages using pitfall traps at three rain forest sites in French Guiana ranging from intact mammalian fauna (Nouragues) to moderate (Kaw) and heavy (Matoury) defaunation. The site with the most depauperate mammalian fauna showed significantly lower dung beetle species richness than the two other two sites, which were not different from each other. Mean abundance and biomass per trap were not different across sites whereas community composition strongly differed among sites. A positive correlation was observed between body size and the individual contribution to dissimilarity between Nouragues and Kaw. The species contributing the most to dissimilarity were large. By contrast, one medium-sized species, dominant in Matoury, contributed the most to dissimilarity between Matoury and other sites. Diurnal genera of large tunnellers showed a higher diversity and abundance in Nouragues compared to other sites, whereas a nocturnal genus showed no differences. Large rollers were more abundant in Kaw compared to other sites. None of the groups of small beetles but one were affected by defaunation. Our results suggest that loss of large mammal populations affects dung beetle assemblage structure and causes decreasing abundance or disappearance of large tunnellers species that have a major impact on several dung beetle-mediated ecological processes.     

Disentangling spatial,environmental and historical effects on tropical forest tree species turnover

空间、环境和历史因素对热带森林树种周转的影响 本文通过回答以下问题来分析空间距离、当前和过去的环境差异及这几个因素对树木群落分类和系统发育转换的影响：(i)树木群落分类和系统发育转换是否与空间距离通过环境差异产生的间接影响相关？(ii)树木群落分类和系统发育转换是否随古气候(末次盛冰期和中全新世)的变化而变化？本文对巴西的14个大西洋雨林样点(采样面积20.4 ha) 83个科615个种进行了研究，获得了当前、中全新世和末次盛冰 期的地块地理坐标、土壤变量和样点生物气候变量。我们使用基于距离的结构方程模型(SEM)来(i)检测空间距离和环境差异的直接影响，以及(ii)检测空间距离通过环境差异对分类(Bray-Curtis距离)和系统发育转换(Comdist和Comdistnt距离)的间接影响。研究结果表明，空间距离通过环境差异对分类和系统发育转换的间接影响较弱。基于生态位中性的历史过程带来的直接影响驱动了树木群落的转换。因此，我们推断古气候(历史过程)促进了产生当前植物区系分支的选择，而空间距离(中性的过程)限制了物种从区域种库向外扩散的范围，环境条件(基于生态位的过程)则在本地选择能够持续生存的分类群。     

Effect of tree host species on fungal community composition in a tropical rain forest in Panama

Abstract.  To determine whether host species influence the composition of fungal communities, the ascomycetes and basidiomycetes present on three tree species ( Prioria copaifera (Fabaceae), Quararibea asterolepis (Bombacaceae), and Trichilia tuberculata (Meliaceae)) were sampled on the 50-ha Forest Dynamics Project plot in lowland moist tropical forest on Barro Colorado Island, Panama. The most abundant fungal morphotypes of both ascomycetes and basidiomycetes were generalists found on all three hosts, but detrended correspondence analysis revealed distinct differences in fungal community composition among host trees. These differences among hosts were constant across census years. Randomization tests revealed that there were significantly fewer host-generalist fungi than expected for ascomycetes but not for basidiomycetes. These results indicate that host composition plays a role in structuring both ascomycete and basidiomycete fungal communities, but that the most successful fungal morphotypes are capable of colonizing multiple host species.     

树种组成和径级结构对热带次生林生物量恢复影响的研究

本研究在海南尖峰岭和吊罗山热带林区海拔245～1255 m范围内根据林分恢复时间设立固定监测样地,探讨了森林地上生物量与树种组成和径级结构的关系.结果显示:海南热带次生林平均地上生物量为(155.38±37.16)×103 kg/hm2,其中低地次生雨林为(137.91±31.02)×103 kg/hm2,山地次生雨林...