地衣型真菌石果衣(疣孢菌科，子囊菌门)次级代谢产物的多样性

地衣能够产生大量的新型次级代谢产物,但以往对石果衣Endocarpon pusillum的研究中未能检测出任何次级代谢产物。然而,对其共生菌进行基因组测序发现其中含有14个沉默的PKS基因和2个沉默的NRPS基因。在此研究中,为激活其途径,使用了优化马铃薯培养基和大米培养基对石果衣共生真菌进行了培养。从优化马铃薯培养物中分离得到9个次级代谢产物,包括2个新的异吲哚-1-酮类化合物(1, 2)。而从大米培养物中分离到3个已知化合物和1个新的萘醌类化合物(9)。通过核磁共振和质谱数据确定了新化合物的结构。研究结果表明,大量地衣中未能检测出任何次级代谢产物,或仅能检测出少量次级代谢产物,可能与其基因组中的沉默基因有关。因此,通过对沉默基因的激活方法为地衣次级代谢产物资源的研究与开发开辟了有效途径。     

Estimation of Endocarpon pusillum Hedwig carbon budget in the Tengger Desert based on its photosynthetic rate

This study investigated the photosynthetic rate of the lichen Endocarpon pusillum at the Chinese Academy of Sciences Shapotou Desert Research Station and estimated its annual contribution to the carbon budget in the ecosystem. The software SigmaPlot 10.0 with “Macro-Area below curves” was used to calculate the carbon fixation capacity of the lichen. The total carbon budget (ΣC) of the lichen was obtained by subtracting the respiratory carbon loss (ΣDR) from the photosynthetic carbon gain (ΣNP). Because water from precipitation plays an important role in photosynthesis in this ecosystem, the annual carbon budget of E. pusillum at the station was estimated based on the three-year average precipitation data from 2009 to 2011. Our results indicate that the lichen fixes 14.6 g C m^?2 annually. The results suggest that artificial inoculation of the crust lichen in the Tengger Desert could not only help reduce the sand and dust storms but also offer a significant carbon sink, fixing a total of 438000 t of carbon over the 30000 km² of the Tengger Desert. The carbon sink could potentially help mitigate the atmospheric greenhouse effect. Our study suggests that the carpet-like lichen E. pusillum is an excellent candidate for “Bio-carpet Engineering” of arid and semi-arid regions.     

石果衣菌藻次级代谢产物的初步研究

荒漠地衣石果衣 Endocarpon pusillum中未能检测出任何次级代谢产物,然而,其共生菌基因组中却含有14个PKS基因和2个NRPS基因。通过激活培养后从中分离出3个次级代谢产物,4,6,9-三羟基-7-甲基-1H,3H-萘并[1,8-cd]吡喃-1,3-二酮（lamellicolic anhydride）、石果衣菌素A（endocarpin A）及石果衣菌素B（endocarpin B）,后二者为新结构化合物。从其共生藻柯氏复球藻 Diplosphaera chodatii中分离出3个脱镁叶绿素类化合物,即脱镁叶绿素甲酯酸b（phaeophorbide b）、13-表-脱镁叶绿素甲酯酸a（13- epi-phaeophorbide a）及脱镁叶绿素甲酯酸a（phaeophorbide a）。其中脱镁叶绿素甲酯酸b具有中等的清除DPPH活性。     

Congruent genetic structure in the lichen-forming fungus Lobaria pulmonaria and its green-algal photobiont

The extent of codispersal of symbionts is one of the key factors shaping genetic structures of symbiotic organisms. Concordant patterns of genetic structure are expected in vertically transmitted symbioses, whereas horizontal transmission generally uncouples genetic structures unless the partners are coadapted. Here, we compared the genetic structures of mutualists, the lichen-forming fungus Lobaria pulmonaria and its primary green-algal photobiont, Dictyochloropsis reticulata. We performed analysis of molecular variance and variogram analysis to compare genetic structures between symbiosis partners. We simulated the expected number of multilocus-genotype recurrences to reveal whether the distribution of multilocus genotypes of either species was concordant with panmixia. Simulations and tests of linkage disequilibrium provided compelling evidence for the codispersal of mutualists. To test whether genotype associations between symbionts were consistent with randomness, as expected under horizontal transmission, we simulated the recurrence of fungal-algal multilocus genotype associations expected by chance. Our data showed nonrandom associations of fungal and algal genotypes. Either vertical transmission or horizontal transmission coupled with coadaptation between symbiont genotypes may have created these nonrandom associations. This study is among the first to show codispersal and highly congruent genetic structures in the partners of a lichen mutualism.     

Physiological mechanisms of adaptation of alloplasmic wheat hybrids to soil drought

We studied physiological mechanisms of plant adaptation to drought for two alloplasmic wheat (Triticum aestivum L.) hybrids (APHs) on the cytoplasm of rye (Secale cereale L.) or ovate goatgrass (Aegilops ovata L.) and two standard regionalized spring wheat cultivars, Kometa and Priokskaya. In response to plant tissue dehydration, APHs rapidly reduced the transpiration rate and lost much less water than standard cultivars. During drought, peroxidase activity was significantly increased only in APH on the rye cytoplasm, whereas it declined substantially in cv. Kometa. Peroxidation of lipids (POL) was activated in cv. Kometa stronger than in hybrids, which also indicates that, in this cultivar, there was no complete detoxification of hydrogen peroxide under stress conditions. After watering resumption, APHs displayed a better capacity for reparation than standard cultivars, which was manifested in peroxidase activation and POL suppression, i.e., in more complete reduction of the oxidative stress consequences. We concluded that a higher APH drought resistance, as compared with standard cultivars, was determined by their more efficient antioxidant defense and a better capacity for recovery.     

Frequency-based analysis of the early rapid filling pressure-flow relation elucidates diastolic efficiency mechanisms

Stiffness- and relaxation-based diastolic function (DF) assessment can characterize the presence, severity, and mechanism of dysfunction. Although frequency-based characterization of arterial function is routine (input impedance, characteristic impedance, arterial wave reflection), DF assessment via frequency-based methods incorporating optimization/efficiency criteria is lacking. By definition, optimal filling maximizes (E wave) volume and minimizes "loss" at constant stored elastic strain energy (which initiates mechanical, recoil-driven filling). In thermodynamic terms, optimal filling delivers all oscillatory power (rate of work) at the lowest harmonic. To assess early rapid filling optimization, simultaneous micromanometric left ventricular pressure and echocardiographic transmitral flow (Doppler E wave) were Fourier analyzed in 31 subjects. A validated kinematic filling model provided closed-form expressions for E wave contours and model parameters. Relaxation-based DF impairment is indicated by prolonged E wave deceleration time (DT). Optimization was assessed via regression between the dimensionless ratio of 2nd (Q2) and 3rd flow harmonics (Q3) to the lowest harmonic (Q1), i.e., (Q2/Q1) or (Q3/Q1) vs. DT or c, the filling model's viscosity/damping (energy loss) parameter. Results show that DT prolongation or increased c generated increased oscillatory power at higher harmonics (Q2/Q1 = 0.00091DT + 0.09837, r = 0.70; Q3/Q1 = 0.00053DT + 0.02747, r = 0.60; Q2/Q1 = 0.00614c + 0.15527, r = 0.91; Q3/Q1 = 0.00396c + 0.05373, r = 0.87). Because ideal filling is achieved when all oscillatory power is delivered at the lowest harmonic, the observed increase in power at higher harmonics is a measure of filling inefficiency. We conclude that frequency-based analysis facilitates assessment of filling efficiency and elucidates the mechanism by which diastolic dysfunction associated with prolonged DT impairs optimal filling.     

Relationship between the algal partners and the growth of lichen-forming fungus Porpidia crustulata

In recent years, examinations based on morphological characters and phylogenetic analyses have begun to reveal the diversity of photobionts in lichen symbioses. However, still little is known regarding genetic diversity and ecological adaptation of algal partners in lichen symbioses. In this study, we investigated the photobiont Chlorella “sp. GC” (Trebouxiophyceae), a partner of Porpidia crustulata from the Guancen Mountains, China. We examined the relationship between photobiont layer thickness and Porpidia crustulata growth over a 6-year period (2007–2012). Although Porpidia crustulata exhibited moderate growth rates (0.4–0.62 mm year^?1), photobiont layer became increasingly thinner over the six-year period. We speculate that prolonged exposure to sunlight and desiccation may deleteriously alter photobiont morphology and physiology. Porpidia crustulata may be forced into a state of physiological dormancy.     

In vivo gene expression profiling of the entomopathogenic fungus Beauveria bassiana elucidates its infection stratagems in Anopheles mosquito

The use of entomopathogenic fungi to control mosquitoes is a promising tool for reducing vector-borne disease transmission.To better understand infection stratagems of insect pathogenic fungi,we analyzed the global gene expression profiling of Beauveria bassiana at 36,60,84 and 108 h after topical infection of Anopheles stephensi adult mosquitoes using RNA sequencing(RNA-Seq).A total of 5,354 differentially expressed genes(DEGs) are identified over the course of fungal infection.When the fungus grows on the mosquito cuticle,up-regulated DEGs include adhesion-related genes involved in cuticle attachment,Pthll-like GPCRs hypothesized to be involved in host recognition,and extracellular enzymes involved in the degradation and penetration of the mosquito cuticle.Once in the mosquito hemocoel,the fungus evades mosquito immune system probably through up-regulating expression of |3-l,3-glucan degrading enzymes and chitin synthesis enzymes for remodeling of cell walls.Moreover,six previous unknown SSCP(small secreted cysteine-rich proteins) are significantly up-regulated,which may serve as "effectors" to suppress host defense responses.B.bassiana also induces large amounts of antioxidant genes to mitigate host-generated exogenous oxidative stress.At late stage of infection,B.bassiana activates a broad spectrum of genes including nutrient degrading enzymes,some transporters and metabolism pathway components,to exploit mosquito tissues and hemolymph as a nutrient source for hyphal growth.These findings establish an important framework of knowledge for further comprehensive elucidation of fungal pathogenesis and molecular mechanism of Beauveria-mosqaito interactions.     

Characterization of two novel non-reducing polyketide synthase genes from the lichen-forming fungus Hypogymnia physodes

Lichens are known to produce a variety of secondary metabolites including polyketides, which have valuable biological activities. Some polyketides are produced solely by lichens. The biosynthesis of these compounds is primarily governed by iterative type I polyketide synthases. Hypogymnia physodes synthesize polyketides such as physodic, physodalic and hydroxyphysodic acid and atranorin, which are non-reducing polyketides. Two novel non-reducing polyketide synthase (PKS) genes were isolated from a fosmid genomic library of a mycobiont of H. physodes using a 409bp fragment corresponding to part of the reductase (R) domain as a probe. H. physodes PKS1 (Hyopks1) and PKS2 (Hypopks2) contain keto synthase (KS), acyl transferase (AT), acyl carrier protein (ACP), methyl transferase (ME) and R domains. Classification based on phylogeny analysis using the translated KS and AT domains demonstrated that Hypopks1 and Hypopks2 are members of the fungal non-reducing PKSs clade III. This is the first report of non-reducing PKSs containing the R domain-mediated release mechanisms in lichens, which are also rare fungal type I PKS in non-lichenized filamentous fungi.