Analysis of the main structural trends for biscyclometalated dinuclear rhodium compounds with nitrogen donor axial ligands

A new series of biscyclometalated dinuclear rhodium(II) compounds with the general formula Rh₂(O₂CR)₂(PC)₂ · (N)₂ have been obtained, where PC is a cyclometalated phosphine, R an aliphatic group, and N a nitrogen donor ligand. The crystal structures for these compounds have been determined by X-ray diffraction. The most important structural trends have been analyzed, and have also been compared with the same parameters for different analogous compounds described previously in the literature.     

Homoleptic platinum(II) and palladium(II) complexes of 1,5,9-trithiacyclododecane: the crystal structures of [Pt(12S3)2](PF6)2 · 2CH3NO2 and [Pd(12S3)2](BF4)2 · 0.5H2O

The synthesis, spectroscopy, electrochemistry, and crystal structures of two new mononuclear homoleptic Pt(II) and Pd(II) complexes with the crown trithioether 1,5,9-trithiacyclododecane (12S3) are reported. In contrast to behavior with analogous smaller ring trithiacrowns, both metal complexes exhibit exodentate axial sulfur donors, a consequence of the preferred conformation of the 12S3 ligand. The lack of two axial metal-sulfur interactions correlates with the observed electronic spectroscopy and oxidative electrochemistry displayed by the complexes and contrasts with properties exhibited by complexes containing smaller polythioether macrocycles. The two complexes have electronic spectra dominated by charge transfer, not d-d bands and show no M²⁺/M³⁺ couples. Both complexes show a fluxional 12S3 ligand in solution due to a 1,5-metallotropic shift, an uncommon observation of this particular type of intramolecular ligand exchange. The ¹⁹⁵Pt NMR chemical shift of −4201 ppm for [Pt(12S3)₂]²⁺ is consistent with an alternating positioning of the four sulfur lone pairs on the coordinated thioethers. Although 12S3 is poorly pre-organized for facial complexation, its flexibility to position a sulfur in an exodentate fashion enables it to form stable complexes with d⁸ metal ions such as Pt(II) and Pd(II).     

Ln2(O2CCH2PO3)2(H2O)3 · H2O (Ln = La, Pr, Nd, Sm): Layered lanthanide phosphonoacetates containing two-dimensional -Ln-O- linkages

Four novel isostructural lanthanide phosphonate compounds with formula Ln₂(O₂CCH₂PO₃)₂(H₂O)₃ · H₂O [Ln = La (1), Pr (2), Nd (3), Sm (4)] have been prepared through hydrothermal reactions of phosphonoacetate acid and lanthanide nitrates. All show layered structures made up of {LnO₉} polyhedra and {CPO₃} tetrahedra with the lattice water molecules locating between the layers. Within the layer, chains of edge-sharing {LnO₉} polyhedra are connected via corner-sharing by phosphonate oxygens forming a two-dimensional -Ln-O- linkage. Thermal analyses and XRD measurements reveal that the framework structures can be maintained up to 400 °C.     

Reaction of R(Ph)SnCl2(R=Me, Et) with 2,6-diacetylpyridine bis(thiosemicarbazone) (H2DAPTSC): the crystal structures of [Me(Ph)Sn(HDAPTSC)]Cl · 1.25 MeOH and [Et(Ph)Sn(H2DAPTSC)]Cl2 · MeOH · H2O

The reactions of Me(Ph)SnCl₂ and Et(Ph)SnCl₂ with 2,6-diacetylpyridine bis(thiosemicarbazone) (H₂DAPTSC) afforded the complexes [Me(Ph)Sn(HDAPTSC)]Cl · 1.25MeOH (1) and [Et(Ph)Sn(H₂DAPTSC)]Cl₂ · MeOH · H₂O (2), respectively. Single-crystal X-ray crystallography showed that in both complexes the ligand, monodeprotonated in 1 and neutral in 2, is S(1),S(2),N(3),N(4),N(5)-coordinated, and the coordination geometry around the metal can be described as a distorted pentagonal bipyramid with the aryl and alkyl groups in axial positions. ¹H and ¹¹⁹Sn NMR studies of solution in DMSO suggest that 2 dissociates completely in this solvent, while 1 evolves to the new complex [Me(Ph)Sn(DAPTSC)], with release of H₂DAPTSC and Me(Ph)SnCl₂. These conclusions were also supported by conductivity measurements.     

Mn(II) complexes of monoanionic bidentate chelators: X-ray crystal structures of Mn(dha)2(CH3OH)2 (Hdha = dehydroacetic acid) and [Mn(ema)2(H2O)]2 · 2H2O (Hema = 2-ethyl-3-hydroxy-4-pyrone)

This report describes synthesis and characterization of bis-ligand Mn(II) complexes of bidentate chelators: maltol (3-hydroxy-2-methyl-4-pyrone), ethylmaltol (2-ethyl-3-hydroxy-4-pyrone), 1,2-dimethyl-3-hydroxy-4-pyridinone (DMHP) and dehydroacetic acid. All four Mn(II) complexes were characterized by elemental analysis, IR, UV/Vis, EPR, cyclic voltammetry, and X-ray crystallography in cases of Mn(dha)₂(CH₃OH)₂ and [Mn(ema)₂(H₂O)]₂ · 2H₂O. The bidentate chelator plays a significant role in the solid state structure of its Mn(II) complex. For example, dha forms the monomeric complex Mn(dha)₂(CH₃OH)₂ while ethylmaltol forms the dimeric complex [Mn(ema)₂(H₂O)]₂. Because of smaller size, maltol ligands in Mn(ma)₂ are able to bridge adjacent Mn(II) centers to give a polymeric structure in solid state. Despite of the difference in their solid state structures, both Mn(ema)₂ and Mn(ma)₂ exist in solution as monomeric Mn(II) species, Mn(ema)₂(H₂O)₂ and Mn(ma)₂(H₂O)₂. This assumption is supported by the similarity in their UV/Vis spectra, EPR data and electrochemical properties. Replacing maltol with DMHP results in a decrease (by ∼100 mV) in the redox potential for the Mn(II)/Mn(III) couple, suggesting that DMHP stabilizes Mn(III) better than maltol. Since Mn(DMHP)₂(H₂O)₂ is readily oxidized to form the more stable Mn(III) complex Mn(DMHP)₃, DMHP has the potential as a chelator for removal of excess Mn(II) from patients with chronic Mn toxicity.     

Syntheses, characterizations and crystal structures of two lead(II) diphosphonates: Pb2[NH(CH2PO3)2] · 2H2O and Pb3[HO2C(CH2)3NH(CH2PO3)2]2 · 2H2O

Hydrothermal reactions of lead(II) acetate and HO₂C(CH₂)₃N(CH₂PO₃H₂)₂ at 170 and 140 °C, respectively, resulted in two different lead diphosphonates, namely, Pb₂[NH(CH₂PO₃)₂] · 2H₂O (1), in which the butyric acid moiety of the HO₂C(CH₂)₃N(CH₂PO₃H₂)₂ has been cleaved and a novel layered compound, Pb₃[HO₂C(CH₂)₃NH(CH₂PO₃)₂]₂ · 2H₂O (2). Their crystal structures have been determined by single crystal X-ray diffraction. In compound 1, the interconnection of the lead(II) ions by bridging amino-diphosphonate ligands leads to the formation of a 3D network. Compound 2 features an unusual triple-layer structure with the non-coordinated butyric acid moieties as pendant groups between the layers.     

Structure and magnetic properties of Ln2[Cu(opba)]3(DMSO)6(H2O) · (H2O) compounds with LnLa-Lu exhibiting ladder-like molecular motifs

The reaction of Ln(III) ions with the precursor [Cu(opba)]²⁻ in DMSO has afforded a series of isostructural compounds of general chemical formula Ln₂[Cu(opba)]₃(DMSO)₆(H₂O) · (H₂O), where Ln(III) stands for a lanthanide ion and opba stands for ortho-phenylenebis(oxamato). The crystal structure has been solved for the Gd(III) containing compound. It crystallizes in the orthorhombic system, space group Pbn2₁ (No. 33) with a = 9.4183(2) Å, b = 21.2326(4) Å, c = 37.9387(8) Å and Z = 4. The structure consists of ladder-like molecular motifs parallel to each other. To the best of our knowledge, this is the first Ln(III)Cu(II) coordination polymer family exhibiting the same crystal structure over the whole lanthanide series. The magnetic properties of the compounds have been investigated and the magnetic behavior of the Gd(III) containing compound was studied in more detail.     

K2[Zn(CV)2(H2O)2] · 2H2O: The first Zn(II) complex structurally characterized containing the pseudo-oxocarbon Croconate Violet (CV)

The synthesis, thermal behavior, spectroscopic characterization and crystal and molecular structure of a Zn(II) complex containing the pseudo-oxocarbon Croconate Violet (CV²⁻) dianion, namely K₂[Zn(CV)₂(H₂O)₂] · 2H₂O are reported. Thermal analysis has shown that the complex structure presents coordination and lattice water molecules. According to vibrational spectroscopy the Croconate Violet dianion is coordinated to Zn(II) center through the vicinal oxygen atoms in a chelating fashion with no involvement of CN moieties. The complex structure has been confirmed by single crystal X-ray diffraction analysis. The dianionic units [Zn(CV)₂(H₂O)₂]²⁻ adopt an slight distorted octahedral geometry in which the metallic center is surrounded by six oxygen atoms. These discrete dianionic units are connected through intermolecular hydrogen bonding giving rise to a supramolecular array extended along the crystallographic a axis.     

Preparation and crystal structure of two novel cadmium (II)-trimesates, Cd(HTMA)(NC5H5)2 · 0.5CH3OH · 0.5DMF and Cd(HTMA) · 2H2O

Two novel complexes, Cd(HTMA)(NC₅H₅)₂ · 0.5CH₃OH · 0.5DMF (1) and Cd(HTMA) · 2H₂O (2), of cadmium (II)-trimesates are obtained from slow vapor diffusion and urea hydrolysis, respectively. The Cd(II) centers in the two complexes are bridged by three separate HTMA³⁻ ligands using a same coordination fashion, which contains one monodentate and two chelating bidentate carboxyl groups to form the herringbone-like motif. The herringbone-like motif is further interlinked to construct the two-dimensional Cd(II)-HTMA layer, which is stacked by mutual π-stacking of pyridines for 1 and by hydrogen bond of waters for 2. Thermal stabilities of the two complexes were investigated and the results indicated that Cd(II)-TMA layers in the two complexes are stable still upon 190 °C.     

Hydrothermal synthesis and characterization of a zinc-substituted gallium phosphite, [H3N(CH2)2NH3]1/2 · [GaZn(HPO3)3(H2O)2]

An organically templated zinc-substituted gallium phosphite, [H₃N(CH₂)₂NH₃]_1/2 · [GaZn(HPO₃)₃(H₂O)₂] was synthesized under mild hydrothermal conditions in the presence of ethylenediamine (en) as structure-directing agent and characterized by single-crystal X-ray diffraction analysis. It crystallizes in the orthorhombic space group Pbcn with unit cell parameters: a = 18.6146(10) Å, b = 11.0454(6) Å, c = 10.9074(4) Å, V = 2242.62(19) Å³ and Z = 8. This compound has a three-dimensional framework built up from secondary building units (SBU) of Ga(III) (or Zn(II)) and HPO₃ pseudopyramid by sharing vertices. The structure displays a two-dimensional channel system running along the [0 0 1] and [0 1 0] direction with 5-, 8- and 10-membered rings. The diprotonated ethylenediamine template molecules are located in the channels. In this structure, some of the Ga(III) sites are occupied by Zn(II) atoms. The compound was also characterized by IR spectroscopy, inductively coupled plasma (ICP), X-ray photoelectron spectra (XPS), differential thermal and thermogravimetric analyses.     

K2Fe(C2O4)(HPO4)(OH2) · H2O: A layered oxalatophosphate hybrid material

One novel layered oxalatophosphate structure K₂Fe(C₂O₄)(HPO₄)(OH₂) · H₂O (1) has been synthesized by hydrothermal method. X-ray crystallography reveals that the complex 1 possesses a 2D layered structure constructed from octahedral FeO₆, tetrahedral moieties and multidentate oxalate ligands with the K⁺ cations among the layers. It is noteworthy that the oxalate anion as a tetradentate ligand bonds to three iron atoms in bidentate-chelating mode on one side and in monodentate-bridging mode on the other, thus forming a neutral iron oxalate sheet. This new structural feature can be considered as the third role of the oxalate ions in metal oxalatophosphate chemistry.     

3D hydrogen bonded metal-organic frameworks constructed from [M(H2O)6][M′(dipicolinate)2] · mH2O (M/M′ = Zn/Ni or Ni/Ni). Identification of intercalated acyclic (H2O)6/(H2O)10 clusters

New heterodinuclear Zn^II/Ni^II (1) and homodinuclear Ni^II/Ni^II (2) water-soluble and air stable compounds of general formula [M(H₂O)₆][M′(dipic)₂] · mH₂O have been easily prepared by self-assembly of the corresponding metal(II) nitrates with dipicolinic acid (H₂dipic) in water solution at room temperature.  The compounds have been characterized by IR, UV/Vis and atomic absorption spectroscopies, elemental and X-ray single crystal diffraction (for 1 · 4H₂O and 2 · 5H₂O) analyses.  3D infinite polymeric networks are formed via extensive hydrogen bonding interactions involving all coordinated and crystallization water molecules, and all dipicolinate oxygens, thus contributing to additional stabilization of dimeric units, metal-organic chains and 2D layers.  In 1 · 4H₂O, the latter represent a rectangular-grid 2D framework with multiple channels if viewed along the c crystallographic axis, while in 2 · 5H₂O intercalated crystallization water molecules are associated to form acyclic nonplanar hexameric water clusters and water dimers which occupy voids in the host metal-organic matrix, with a structure stabilizing effect via host-guest interactions.  The hexameric cluster extends to the larger (H₂O)₁₀ one with an unusual geometry (acyclic helical octamer with two pendent water molecules) by taking into account the hydrogen bonds to water ligands in [Ni(H₂O)₆]²⁺.  The obtained Zn/Ni compound 1 relates to the recently reported family of heterodimetallic complexes [M(H₂O)₅M′(dipic)₂] · mH₂O (M/M′ = Cu/Co, Cu/Ni, Cu/Zn, Zn/Co, Ni/Co, m = 2, 3), what now allows to establish the orders of the metal affinity towards the formation of chelates with dipicolinic acid (Co^II > Ni^II > Zn^II > Cu^II) or aqua species (Co^II < Ni^II < Zn^II < Cu^II).     

Synthesis and structural characterization of dinuclear iridium hydrido complex with 3,6-bis(2-pyridyl)tetrazine, [Ir2(H)4(PPh3)4(bptz)](PF6)2 · 4CH2Cl2

Reaction of the precursor Ir complex [Ir(H)₂(PPh₃)₂(Me₂CO)₂]PF₆ with 3,6-bis(2-pyridyl)tetrazine (bptz) in CH₂Cl₂ gave a novel dinuclear Ir hydrido complex [Ir₂(H)₄(PPh₃)₄(bptz)](PF₆)₂ · 4CH₂Cl₂. Crystallographic study described an interesting coordination environment having a π-π interaction and ¹H NMR study showed unique upfield shifts of pyridyl rings that are likely induced by the ring current effect of neighboring PPh₃ ligands.     

A nearly symmetric trinuclear chromium(III) oxo carboxylate assembly: preparation, molecular and crystal structure, and magnetic properties of [Cr3O(O2CPh)6(MeOH)3](NO3) · 2MeOH

Complex [Cr₃O(O₂CPh)₆(MeOH)₃](NO₃) · 2MeOH (1 · 2MeOH) has been synthesized from the one-pot reaction between Cr(NO₃)₃ · 9H₂O and NaO₂CPh in MeOH. The structure of the complex has been solved by single-crystal X-ray crystallography. It crystallizes in the monoclinic space group P2₁/n with a=14.716(6) Å, b=22.569(8) Å, c=15.755(6) Å, β=95.02(1)°, V=5212.5(4) ų and Z=4. Although the cation does not possess any crystallographically imposed symmetry element, its {Cr₃(μ₃-O)} core is nearly symmetric. Each Cr^III…Cr^III vector is further bridged by two η¹:η¹:μ₂ benzoates, with a terminal MeOH molecule completing octahedral coordination at each metal ion. The crystal structure consists of layers that are parallel to (0 1 0) crystallographic plane and are formed through π-π stacking interactions and hydrogen bonds. Variable-temperature magnetic susceptibility and solid-state ¹H NMR studies indicate that the total spin value of the ground state is 1/2. EPR experiments reveal the existence of a distribution of trimers with axial anisotropy in the g tensor.     

Hydrolytic stability of SnCl4 and GaCl3 in the formation of [cis-SnCl4(H2O)2] · 18-crown-6 · 2H2O and [[2,2,2]cryptand + 2H][GaCl4]2

The combination of anhydrous SnCl₄ with 18-crown-6 in aqueous conditions results in formation of the non-hydrolysed product [cis-SnCl₄(H₂O)₂] · 18-crown-6 · 2H₂O. The X-ray crystal structure shows extensive intermolecular hydrogen bonding involving the cis-octahedral SnCl₄(H₂O)₂ units, the uncoordinated water molecules and the crown ether. Similarly, [2,2,2]cryptand reacts with an aqueous solution formed by adding anhydrous GaCl₃ to slightly acidic water, affording [[2,2,2]cryptand + 2H⁺][GaCl₄]₂.     

[Hg(9-methyl-1-deazapurine)2](NO3)2 · H2O: a complex with a distorted hexagonal bipyramidal metal ion coordination sphere

Reaction of 9-methyl-1-deazapurine (9-MeDP) with Hg(CF₃COO)₂ in the presence of NaNO₃ yields the title compound [Hg(9-MeDP)₂](NO₃)₂ · H₂O with the two 9-MeDP ligands bound to the metal ion via their N7 positions. The X-ray structure is reported: monoclinic, P2₁/c (no. 14), a = 5.4015(11), b = 20.467(4), c = 17.775(4) Å, β = 97.00(3)°, V = 1950.4(7) ų, Z = 4. Hg is eight-coordinate with two trans-oriented Hg-N bonds (2.073(3) and 2.075(3) Å) and three nearly coplanar, bidentate nitrate moieties (Hg-O: 2.716(3)-2.985(4) Å), leading to a distorted hexagonal bipyramidal environment of the metal ion. Within this structure, the nitrate ions form a honeycomb-like chain structure with Hg^II being positioned inside the combs. This work represents the first report of such geometry for a transition metal ion surrounded by symmetrically bidentate nitrate ions. The corresponding nucleoside, 1-deazapurine 2′-deoxyribonucleoside, also forms a stable 2:1 complex with Hg^II, as was shown by ¹H NMR spectroscopy, making it a potential candidate for incorporation into nucleic acids based on metal-mediated base pairs.     

Synthesis and X-ray structure of the dinuclear platinum(II) complex with saccharin {K[Pt(sac)3(H2O)] · H2O}2: Studies on its antiproliferative activity in aqueous solution

Synthesis and X-ray structure of a dinuclear platinum(II) complex with the ligand saccharin(sac) are described. The structure shows two approximately square-planar platinum centers. Each platinum atom is coordinated to one water molecule and three N-bonded saccharinate ligands. The two centers are linked through two potassium atoms. Each potassium atom interacts with six oxygen atoms from hydration and coordinated water molecules and from carbonyl and sulfonate groups of the ligands. It is suggested that, in aqueous solution, the dimeric structure of the complex is dissociated and the monomeric species K[Pt(sac)₃(H₂O)] is formed. The complex was dissolved in water and submitted to in vitro cytotoxic analyses using HeLa cells (human cervix cancer). It was shown that the monomeric complex elicited a potent cytotoxic activity when compared to the vehicle-treated cells. The IC₅₀ value for the monomeric complex is 6.8 μM, a little bit higher than that obtained for cisplatin.     

Crystal structure and thermal characterization of cadmium oxalate [CdC2O4 · 3H2O] and barium-doped cadmium oxalate [Ba0.5Cd0.5(C2O4)2 · 5H2O] single crystals grown in silica gel

Pure cadmium oxalate trihydrate (COT) and barium added cadmium oxalate (BCO) single crystals were grown by controlled diffusion of Cd²⁺ and Ba²⁺ ions in silica gel at ambient temperature. A single test tube technique coupled with gel aging conferred maximum size crystals by controlling the nucleation rate. It was found that the pH and age of the gel greatly influenced the crystal quality, their size and transparency. Grown crystals CdC₂O₄ · 3H₂O and Ba_0.5Cd_0.5(C₂O₄)₂ · 5H₂O were characterized by X-ray diffraction, Fourier transform infrared spectroscopy and thermal analysis. Effect of barium dopant on the growth and morphology of cadmium oxalate was studied. Pure cadmium oxalate crystallized in triclinic system and the barium-doped cadmium oxalate crystallized in hexagonal system with massive changes in their unit cell parameters. The infrared spectrum revealed the presence of oxalate ligands and water of hydration in both the pure and barium-doped crystals. Thermal analysis showed that the grown crystals were dehydrated thermally even from lower temperatures and the doped crystals were found more stable.     

Syntheses and crystal structures of cyano-bridged cluster-metal layered coordination polymers [Cu(dien)]3[W4Te4(CN)12] · 9H2O and [Ni(en)(NH3)]3[W4Se4(CN)12] · 7.5H2O

Two new tetrahedral tungsten cyanide cluster compounds, [Cu(dien)]₃[W₄Te₄(CN)₁₂] · 9H₂O (1) (dien=diethylenetriamine) and [Ni(en)(NH₃)]₃[W₄Se₄(CN)₁₂] · 7.5H₂O (2) (en=ethylenediamine), were synthesized by treating aqueous solutions of the saltlike cluster compound K₆[W₄Te₄(CN)₁₂] · 5H₂O/K₆[W₄Se₄(CN)₁₂] · 6H₂O with copper(II)/nickel(II) chloride in aqueous ammonia containing dien/en. The cyano-bridged layered coordination polymeric compounds were characterized by single-crystal X-ray diffraction analysis: monoclinic, space group P2₁ for 1; trigonal, space group for 2. Structures of 1 and 2 consist of infinite neutral layers of cluster components {W₄Te₄(CN)₁₂}/{W₄Se₄(CN)₁₂} connected, one another by {Cu(dien)} or {Ni(en)(NH₃)} fragments, respectively.     

Long-range superexchanged magnetic interaction observed in heterometallic complex: {[Fe(Tpms)(CN)3][Mn(H2O)2(DMF)2]} · DMF

A new tri-cyanometalate building block for heterometallic complexes, [PPh₄]₂[Fe^II(Tpms)(CN)₃] (2) (PPh₄ = tetraphenylphosphonium; Tpms = tris(pyrazolyl) methanesulfonate), has been prepared. Using it as a building block, a one-dimensional chain compound, {[Fe^II(Tpms)(CN)₃][Mn^II(H₂O)₂( DMF)₂]} · DMF (3), has been synthesized and structurally characterized. The magnetic properties of 3 correspond to a ferromagnetic chain with weak long-range superexchanged magnetic interaction between the high-spin manganese(II) ions.