Population origin of Atlantic sturgeon Acipenser oxyrinchus oxyrinchus by‐catch in U.S. Atlantic coast fisheries

Microsatellite DNA and mitochondrial DNA control‐region sequence analyses were used to determine the population and distinct population segment (DPS) origin of 173 Atlantic sturgeon Acipenser oxyrinchus oxyrinchus encountered from the Gulf of Maine to Cape Hatteras, North Carolina, in NOAA's Northeast Fisheries Observer Program. It was found that the Hudson River was by far the greatest contributor to this coastal by‐catch, with 42·2–46·3% of specimens originating there. Generally, specimens represented the geographic province of the river in which they were spawned, but some specimens, particularly those originating in the South Atlantic DPS, moved to great distances. Genetic mixed‐stock analyses provide an accurate approach to determine the DPS and population origin of A. o. oxyrinchus by‐catch in coastal waters, but most informative management requires that these results be partitioned by locale, season, target fishery and gear type.     

Microsatellite DNA variation in Atlantic sturgeon (Acipenser oxyrinchus oxyrinchus) and cross-species amplification in the Acipenseridae

Overharvest and habitat alteration have led toa collapse of most commercial Atlantic sturgeon(Acipenser oxyrinchus oxyrinchus)fisheries while pushing the species to rarityor extirpation in most of its historical range. A biologically sound conservation program forthis species requires knowledge of its geneticdiversity and of the evolutionary relationshipsamong geographic populations. To address theseresearch needs, six microsatellite loci wereisolated from A. o. oxyrinchus. Pedigreeanalysis suggested that all are inherited in acodominant Mendelian pattern. The six lociwere tested in ten additional sturgeon speciesfrom three genera and three apparent ploidylevels (4n, 8n, 16n). Approximately 70% ofsuccessful locus-species amplifications werepolymorphic. Polysomy was observed most oftenin 8n and 16n species. Genetic diversity andpopulation structure of A. o. oxyrinchuswere assayed using three polymorphic Aoxmarkers and four markers developed from lakesturgeon (A. fulvescens). A. o.oxyrinchus were sampled from the AltamahaRiver, Georgia, USA north to the St. LawrenceRiver, Quebec, Canada. Gulf sturgeon, A.o. desotoi, were sampled from the SuwanneeRiver, Florida, USA, to assess differentiationbetween the subspecies. Seventy-seven alleleswere observed to segregate into uniquemultilocus genotypes for each of the 392individuals assayed. Mean diversity wasgreatest in the Chesapeake Bay (9.7 alleles perlocus) and Delaware River (7.4 alleles perlocus) collections, and lowest in the St.Lawrence River (4.6 alleles per locus). Meanheterozygosity across seven loci ranged from44.3% (St. Lawrence River) to 62.6% (Altamaha River). Significant allelic heterogeneity wasobserved in 82% of pairwise comparisons aswell as a global test (p < 0.0001) for A.o. oxyrinchus collections. Genetic distancesuggests the presence of at least sixsubpopulations in A. o. oxyrinchus: St.Lawrence River, St. John River, Hudson River,Delaware River, Albemarle Sound, and AltamahaRiver. Genetic and geographic distances werepositively correlated (r = 0.57, p < 0.03) amongA. o. oxyrinchus, suggesting isolation bydistance and philopatry. Hierarchical genediversity analysis indicated significantgenetic population structure at every level. Maximum likelihood assignment tests correctlyassigned individual fish to collection with ahigh rate of success (mean = 87.5%); this andother lines of evidence indicated that theChesapeake Bay collection represents a mixedpopulation of sub-adult sturgeon from northernand southern Atlantic coast populations. Population structure was correlated with thatsuggested by earlier mitochondrial (mt) DNAanalyses. Significant diversity was observedbetween two Canadian populations from whichonly a single mtDNA haplotype has beenreported.     

Changes in age composition and growth characteristics of Atlantic sturgeon (Acipenser oxyrinchus oxyrinchus) over 400 years

Populations of sturgeon (Acipenseridae) have experienced global declines, and in some cases extirpation, during the past century. In the current era of climate change and over-harvesting of fishery resources, climate models, based on uncertain boundary conditions, are being used to predict future effects on the Earth''s biota. A collection of approximately 400-year-old Atlantic sturgeon spines from a midden in colonial Jamestown, VA, USA, allowed us to compare the age structure and growth rate for a pre-industrial population during a ‘mini-ice age’ with samples collected from the modern population in the same reach of the James River. Compared with modern fish, the colonial population was characterized by larger and older individuals and exhibited significantly slower growth rates, which were comparable with modern populations at higher latitudes of North America. These results may relate to higher population densities and/or colder water temperatures during colonial times.     

Laboratory test of suspended sediment effects on short‐term survival and swimming performance of juvenile Atlantic sturgeon (Acipenser oxyrinchus oxyrinchus,Mitchill, 1815)

Tested was the hypothesis that juvenile Atlantic sturgeon (Acipenser oxyrinchus oxyrinchus) would exhibit no response in short‐term survival or swimming performance when exposed to varying concentrations of suspended sediment simulating dredge plumes in waterways where this species may be impacted by dredging operations. Sediment collected from Savannah Harbor, South Carolina, USA was used to simulate a worst‐case scenario. Juvenile sturgeon were contained for a 3‐day period in flow‐through aquaria, with limited opportunity for movement, in sediment of varying concentrations (100, 250 and 500 mg L^?1 total suspended solids [TSS]) mimicking prolonged exposure to suspended sediment plumes near an operating dredge. Of the 90 fish exposed, 86 (96%) survived the test. Of the four fish that died, one was exposed to 250 TSS and three to 500 TSS. Swimming performance results indicated that nearly all fish were positively rheotactic. Critical swim speeds (U_crits) were moderate, whether measured as absolute values (21–31 cm s^?1) or as relative values (1.4–2.1 body lengths s^?1), with no significant differences among treatments (F < 0.83, P ≥ 0.4874). Behavior was dominated by contact‐based locomotion and station‐holding. Absence of substantial or significant immediate effects on survival and swimming performance suggest that impacts of sediment plumes in nature, where fish have freedom of movement and the power to escape rapidly, are minimal.     

Novel microsatellite markers for Atlantic sturgeon (Acipenser oxyrinchus) population delineation and broodstock management

Twenty‐one new disomic, polymorphic microsatellite DNA markers were isolated in Atlantic sturgeon, Acipenser oxyrinchus oxyrinchus. These markers yielded a total of 220 alleles in a survey of 16 fish; two to 21 alleles/locus were observed. Each locus segregated in a Mendelian fashion when tested in a family, and a set of 14 of the loci distinguished between siblings and half‐siblings. Average observed heterozygosity ranged from 18.8 to 100.0%, and no linkage disequilibrium was detected. These loci should detect sufficient genetic diversity to allow kinship analysis for broodstock management, gene marking for stocking assessment and life history studies, and delineation of fine‐scale population structure.     

Stock composition of Atlantic sturgeon (Acipenser oxyrinchus oxyrinchus) encountered in marine and estuarine environments on the U.S. Atlantic Coast

Atlantic sturgeon (Acipenser oxyrinchus oxyrinchus) is a large, anadromous fish native to the Atlantic Coast of North America. Although this species once supported important fisheries, centuries of exploitation and habitat degradation have resulted in dramatic declines, presumed extirpation in some rivers, and ultimately listing under the U.S. Endangered Species Act (ESA). Under the ESA, Atlantic sturgeon are listed as five separate Distinct Population Segments (DPSs), which form the basis for federal management. Despite state and federal protections Atlantic sturgeon still face significant threats to their recovery, including fisheries bycatch mortality, marine construction, dredging, dams, and vessel strikes. However, because subadult and adult Atlantic sturgeon migrate extensively across estuarine and marine environments and frequently form mixed-stock aggregations in non-natal habitats, it can be difficult to determine how these threats impact specific populations and DPSs. To better understand ontogenetic shifts in habitat use and stock-specific exposure to anthropogenic threats, we performed a mixed-stock analysis of 1704 Atlantic sturgeon encountered across the U.S. Atlantic Coast. Collections made north of Cape Cod, MA and south of Cape Hatteras, NC were dominated by individuals from regional stocks; however, we found extensive stock mixing in the mid-Atlantic region, particularly in coastal environments where individuals from all five DPSs were commonly observed. Subadults and adults that were encountered in offshore environments had moved, on average, 277 km from their natal source; however, 23% were sampled over 500 km from their natal river suggesting long-distance movements are relatively common in these age classes. Overall, our work highlights that Atlantic sturgeon populations are vulnerable to threats over vast areas and emphasizes the need for continued genetic monitoring to track recovery progress.

     

Atlantic sturgeon (Acipenser oxyrinchus oxyrinchus Mitchill, 1815) early life stage consumption evidenced by high-throughput DNA sequencing

Predation on early life stages of Atlantic Sturgeon Acipenser oxyrinchus oxyrinchus (ATS) may be a constraint to species recovery. Due to the difficulty in assessing consumption of early life stages with traditional diet analysis methods, we pursued an alternative DNA-based approach. We extracted total gut content from gastrointestinal tracts of 23 fish species (593 samples) within the tidal-fresh Pamunkey River fish assemblage collected from known ATS spawning grounds during prime spawning periods (September-October) in 2016. High-throughput DNA sequencing was used to amplify two markers for each sample: mitochondrial cytochrome c oxidase I (COI) and nuclear 18S ribosomal RNA gene. DNA sequences were compared to custom, SILVA 132, and NCBI databases. Results showed presence of ATS DNA in 22 samples (4%) across multiple native and nonnative tidal-fresh fishes. The highest percentage of consumption occurred in samples from Common Carp Cyprinus carpio (11.5) and Striped Bass Morone saxatilis (12.5). Six percent of Blue Catfish Ictalurus furcatus samples had target DNA. Considering there were no bony structures or tissue resembling ATS during morphological evaluation, DNA detections were likely from partially-fully digested eggs or early developing days-old larvae. High-throughput sequencing is capable of detecting consumption of ATS.     

Status and management of Atlantic sturgeon, Acipenser oxyrinchus, in North America

The Atlantic sturgeon, Acipenser oxyrinchus, consists of two subspecies distributed along the Atlantic coast of North America from Labrador to the east coast of Florida (Atlantic sturgeon subspecies – A. o. oxyrinchus) and along the Gulf of Mexico from Florida Bay, Florida to the mouth of the Mississippi River (Gulf sturgeon subspecies – A. o. desotoi). The species has been exploited throughout its range with landings peaking around the turn of the 20th century followed by drastic declines shortly thereafter. During recent years, landings in Canadian waters have increased substantially (approximately 129 metric tons in 1993) while in the United States landings are more controlled or prohibited (approximately 22–24 metric tons in 1993). Recently, the Atlantic States Marine Fisheries Commission developed a Fishery management plan for Atlantic sturgeon, and the United States Fish & Wildlife Service and Gulf States Marine Fisheries Commission drafted a Gulf Sturgeon Recovery/Management Plan. Fishery managers in Canada are in the process of establishing more stringent fishery regulations for sturgeon. Thus, the impact on populations due to harvesting should be substantially reduced. Current research focus includes: life history and population status studies, stock delineation, and development of culture and stock enhancement techniques. Implementation of the findings of such studies may be helpful in the restoration of depleted stocks.     

Exploring epidermal mucus protease activity as an indicator of stress in Atlantic sturgeon (Acipenser oxyrinchus oxyrhinchus)

Atlantic sturgeon are anadromous fish that spend much of their life in near-shore environments. They are designated as “threatened” by the Committee on the Status of Endangered Wildlife in Canada and listed by the IUCN as “near threatened.” In Canada, Atlantic sturgeon support small commercial fisheries in the Saint John River, New Brunswick, and the St. Lawrence River, Quebec. While occupying the marine environment, the species is susceptible to various anthropogenic stressors, including by-catch in trawl fisheries and through interactions with coastal engineering projects such as tidal power development. Atlantic sturgeon are also susceptible to implantation of acoustic tags used by researchers to study their movement ecology. These stressors can cause physiological and behavioural changes in the fish that can negatively impact their viability. Because the species are commercially important, and are also of conservation concern, it is important to understand stress responses of Atlantic sturgeon to better mitigate the effects of increased industrial activity in the coastal zone. This study used proteomics to identify and characterize protease activity and identify putative novel protein biomarkers in the epidermal mucus of Atlantic sturgeon. Changes in protein profiles in Atlantic sturgeon epidermal mucus as a result of by-catch and surgery stress were investigated using one-dimensional sodium dodecyl sulphate-polyacrylamide gel electrophoresis and mass spectrometry. Proteolytic activity was identified and characterized using inhibition zymography, which provided information on the classes of proteases that are associated with stress. Samples were collected from Atlantic sturgeon on the Minas Basin, Nova Scotia, Canada, after capture by brush weir and otter trawl, and after surgical implantation of a V16-69 kHz VEMCO acoustic tag. Significant proteins found in the epidermal mucus include various inflammatory proteins, with calmodulin and complement 9 found ubiquitously, and more rarely lysosome C, identified in a brush weir capture sample. Serum albumin, a blood plasma protein, was another ubiquitous protein and verifies how the sample collection method provides a picture of the internal systems. Protease activity was dominantly exhibited by matrix metalloproteases and serine proteases in all sample collections, with serine proteases more active in otter trawl captures than in brush weir captures. By identifying potential protein biomarkers of stress, this study is an example of a non-invasive method for measuring stress in Atlantic sturgeon. Understanding the defence mechanism and release of non-specific biomarkers can be used to improve conservation regulations, as well as to contribute to the limited scientific knowledge on the stress response of Atlantic sturgeon.     

Validity of an external sex determination method in Atlantic Sturgeon (Acipenser oxyrinchus oxyrinchus)

The validity of the shape of the urogenital opening was tested as a predicable means to determine the sex of Atlantic sturgeon captured in the Saco River estuary, Maine. Evaluation of 121 individuals ranging in size from 107 to 182 cm fork length were compared to non‐lethal radioimmunoassay determined sex data previously examined for these individuals within this estuary. The results suggested that using the shape of the urogenital opening is not a reliable means to determine sex as only 51% of Atlantic sturgeon were correctly identified as female. Additionally, there was no significant difference in correctness relative to 10 cm fork length size classes or sampling month.     

Migration patterns and survival of stocked Atlantic sturgeon (Acipenser oxyrinchus Mitchill, 1815) in Nemunas Basin,Baltic Sea

The restoration of the Atlantic sturgeon Acipenser oxyrinchus in Lithuania started in 2011. Two rivers (Neris and ?ventoji) were chosen for reintroduction in the Nemunas river basin based on historical data and ecological conditions. Since 2011, more than 116 thousand of sturgeon juveniles have been stocked in Lithuania. In order to achieve successful population restoration, it is vital to evaluate the efficiency of performed artificial stocking. Analysis of post‐stocking survival, migration patterns, predation pressure, fisheries‐related mortality and possible aggregation zones are all important to understand the main threats and prepare possible mitigation measures necessary for population establishment during the initial phase of restoration. Therefore, conventional and radio tagging studies were performed during the initial restoration phase in Lithuania. Atlantic sturgeon downstream migration was divergent in summer and appeared to have no significant associations with fish size, river quality or hydrophysical parameters, but in autumn migration speed and even survival in small rivers seemed to depend on flow velocity and water discharge. The distribution of recaptured tagged juveniles coincided with dominant currents in the Curonian Lagoon and Baltic Sea. Some tagged specimens migrated long distances, with two sturgeons from Lithuania being caught in Estonian and Finnish territorial waters at up to 800 km from their release site. Tag recapture analysis and mortality rate of tagged fish clearly indicate that annual fisheries‐related mortality exceeds the required threshold of 5% for population establishment. High survival in rivers indicates that the main threat for a successful sturgeon reintroduction program is commercial fishing in the Curonian Lagoon and Baltic Sea coastal zone.     

Laboratory study of the susceptibility of hatchery reared Atlantic sturgeon (Acipenser oxyrinchus Mitchill, 1815) larvae to predation

The aim of the study was to determine the susceptibility to predation of Atlantic sturgeon larvae (Acipenser oxyrinchus) reared under traditional hatchery conditions. Experiments were conducted to determine whether predators would prey on Atlantic sturgeon if alternative prey was available and if the presence of substrate on the tank bottom impacted the number of Atlantic sturgeon consumed. European perch (Perca fluviatilis) was used as the predator, and the alternative prey were three‐spined stickleback (Gasterosteus aculeatus) or gudgeon (Gobio gobio). The predators and alternative prey were obtained from the wild. The mortality of sturgeon (n = 10) and alternative prey (n = 10) caused by four predators was recorded during 15 min trials. Trials with three‐spined stickleback and gudgeon as alternative prey were performed separately. Each experimental trial was repeated five times. The predators consumed significantly more Atlantic sturgeon than alternative prey in both the experimental setups when the bottom of the tank was covered with gravel and stone substrate and when there was no substrate. In trials with three‐spined stickleback the mortality of Atlantic sturgeon in both experimental setups was 94 ± 8.94%, while that of three‐spined stickleback in the setup with substrate was 20 ± 19.23%, and without substrate it was 22 ± 10.00%. European perch also consumed more Atlantic sturgeon than they did gudgeon, and the mean Atlantic sturgeon mortality in the experimental setup with substrate was 94 ± 5.48%, while for gudgeon it was 48 ± 8.37%. In the experimental setup without substrate the predators also consumed substantially more Atlantic sturgeon than gudgeon, with a mean Atlantic sturgeon mortality of 94 ± 8.94%, while for gudgeon it was 76 ± 5.48%. The study indicated that hatchery reared Atlantic sturgeon larvae are susceptible to predation by European perch. Predation could impact the survival of juvenile Atlantic sturgeon in the natural environment, and it could be one of the factors that is impeding the restoration of this species in the Baltic Sea basin.     

First archaeozoological identification of Atlantic sturgeon (Acipenser oxyrinchus Mitchill 1815) in France

To this day, the only sturgeon to be listed on the French vertebrate inventory is the European sturgeon (Acipenser sturio Linnaeus, 1758). The recent study of sturgeon remains on various French archaeological sites shows the presence of another species: the Atlantic sturgeon (A. oxyrinchus Mitchill 1815). This species already existed in the French Atlantic region at the end of the Neolithic Age 5000 years ago and was still to be found 3000 years later. Thus the A. oxyrinchus determined in several Baltic medieval sites are neither the only nor the first sturgeons to have inhabited European waters. Sturgeon restoration projects in European rivers necessitate a precise determination of the native species. In the case of relict or extinct species, the bone remains found on archaeological sites represent the most reliable source of information. This discovery will also be the starting point of palaeogenetical research (mitochondrial and cellular aDNA) and will give information about the genetic diversity of these threatened or recently extinct populations.