Population genetics of the endangered Wattled Curassow (Crax globulosa,Cracidae, Aves) of the Colombian–Peruvian Amazon using DNA microsatellites and ND2 mitochondrial sequences

The Wattled Curassow (Crax globulosa, Cracidae, Aves) is a large bird living in the Western Amazon basin and a critically endangered species in the Colombian and in the Peruvian Amazon. We carried out the first population genetics analysis of this species employing six nuclear microsatellite markers and sequences of the mtND2 gene. The main results are as follows. (1) The levels of gene diversity were high for the overall population as well as for each of the three islands for both microsatellites and mtDNA. (2) A small amount of genetic differentiation among populations was found with both types of markers (F_ST = 0.027 for microsatellites and N_ST = 0.17 for mitochondrial sequences). (3) Using microsatellites, the Geneclass 2.0 software detected a low correct assignment of individuals to their respective populations. The Structure software only detected one gene pool for the entire area studied. These results are relevant for conservation efforts of this critically endangered species.     

The role of fungi in periodically inundated Amazonian forests

In a comparative survey the terms (terra-firme) flood plain, igapó, várzea with and without black water influence are reviewed and the importance of ectotrophic mycorrhiza for their definition emphasized. Várzea alta with fluvisol base is briefly characterized and a first list of Basidiomycetes collected in it is provided. These are all non-mycorrhizal litter fungi.     

Forest structure and tree species composition of the understory of two central Amazonian várzea forests of contrasting flood heights

We investigated species composition, distribution, and forest structure of understory trees (≥1 m height, <10 cm diameter at breast height) in two late-successional várzea forests subject to contrasting levels of inundation within the Mamirauá Sustainable Development Reserve, western Brazilian Amazon, and compared it with the overstory flora at the same study sites. In total, 1486 individuals and 116 woody species were recorded on an area totaling 3140 m². Individual densities and tree species richness were considerably higher in the high várzea than in the low várzea, which suggests that the heights and durations of the annual inundations are the main factor limiting species regeneration. In addition, approximately one third of the recorded species with densities ≥8 individuals showed regular or random spatial distribution patterns, which suggests that floodwaters act on dispersal strategies and species establishment.Independent of the forest type, floristic similarity between the understory and the overstory amounted to approximately 35%, and to approximately 10% when compared to other understory inventories in Amazonian várzea. Although the inventoried area of the understory amounted to only 16% of that of the overstory, species richness accounted for approximately 52-56% of that of the overstory. The results indicate that the understory flora of várzea forests is distinct and that it significantly increases local tree species richness. The understory flora of várzea forests therefore should be addressed in floristic inventories that provide the basis for regional and/or basin-wide estimations of tree diversity.     

Riparian flooded forests of the Orinoco and Amazon basins: a comparative review

This paper compares the non-deltaic, riparian-flooded forests of the Orinoco and Amazon River basins. Ecological relationships between these forests and their environments that can be useful in establishing schemes for biodiversity conservation are identified. Adaptations of species to flow seasonality, flooding intensity, sedimentation pattern and nutrient depletion are described. The variability and diversity of riparian-flooded forests is related to (i) landscape evolution (regional-scale, long-term), (ii) water quality (basin scale, long-term) and (iii) hydrology and geomorphology (sector-scale, medium-term). The floristic analysis has produced a preliminary list of 242 tree species common to the riparian-flooded forests of both basins. This relatively high number of species is related to connectivity between the riparian corridors of both basins and the effective operation of dispersal mechanisms. Highly oligotrophic environments add uniqueness at the regional scale through the evolution of endemic species presenting adaptations not only to flooding but also to nutrient depletion. The process of genetic diversification and the evolution of genotypes adapted to flooding are suggested to explain longitudinal gradients at tributary junctions and floodplain-upland ecotones where current fluvial dynamics are unpredictable over ecological time scales. The paper presents information that may be used to devise appropriate measures to evaluate sites for riparian biodiversity conservation and management.     

Diurnal distribution and behavioral responses of fishes to extreme hypoxia in an Amazon floodplain lake

Synopsis Because of the need for surface access for aquatic surface respiration (ASR), fish density increases were demonstrated for the open water of a floodplain lake during severe hypoxia. This indicates an O₂-induced diurnal pattern of horizontal migrations between the zone of macrophyte cover and open water. Supplemental experimental investigations seem to suggest that species such as characoids,Colossoma macropomum andSchizodon fasciatum, deviate from this pattern. During long periods of oxygen depletion, they return to the region of macrophyte growth and survive there without displaying the usual kind of ASR. Mortality studies in net cages exposed in natural water bodies confirmed that only these two species are able to survive severe hypoxia beneath macrophyte cover. The possibility of an O₂-input through the root system of plants is discussed. The O₂-concentration has a significant influence on the locomotory behavior and the frequency of opercular movement in characoids. There is significantly less locomotory activity beneath the macrophytes during periods of oxygen depletion among those species not forced to migrate than among those in the open water regions, where normal ASR behavior is possible.     

Root vole movement patterns: do ditches function as habitat corridors?

1. Ditches are often connected to root vole habitat patches (i.e. moist reed patches) in the Netherlands. Due to the linear structure of ditches and because ditch habitat is qualitatively similar to root vole habitat patches, we hypothesized that ditches could function as habitat corridors facilitating dispersal movement of root voles. In order to test this hypothesis, we radiotracked root voles released in a landscape novel to them, consisting of ditches and agricultural meadows.
2. Agricultural meadows often surround the marsh patches inhabited by root voles. As the meadows are mowed regularly, we included the length of the meadow vegetation as an experimental factor in the study.
3. Assuming that ditches function as habitat corridors, we expected root voles in the ditches to move faster and more unidirectionally than root voles in the meadows, and to prefer the ditches to meadows.
4. We found that the ditches did not facilitate faster movements than the meadows. Although the root voles moved back and forth within the ditches, they showed a more directional movement pattern than the root voles in the meadows. Furthermore, the root voles preferred the ditch habitat irrespective of the vegetative cover in the meadow.
5. We conclude that ditches could function as habitat corridors for root voles, as they preferred to move in ditches when in unfamiliar areas.     

Do flood pulses structure amphibian communities in floodplain environments?

Beta diversity can provide insights into the processes that regulate communities subjected to frequent disturbances, such as flood pulses, which control biodiversity in floodplains. However, little is known about which processes structure beta diversity of amphibians in floodplains. Here, we tested the influence of flood pulses on the richness, composition, and beta diversity of amphibians in Amazonian floodplain environments. We also evaluated indicator species for each environment. We established linear transects in three environments: low várzea, high várzea, and macrophyte rafts. Species richness decreased and beta diversity increased according to the susceptibility of habitats to flood pulses. Indicator species differed among environments according to forest succession promoted by the flood pulse. The decrease in species richness between high and low várzea is due to non‐random extinctions. The higher rates of species turnover between várzeas and macrophyte rafts are driven by the colonization of species adapted to open areas. Our results highlight that the maintenance of complex environments is needed to protect biodiversity in floodplains.     

Habitat Partitioning Among Primates in Maracá Island, Roraima, Northern Brazilian Amazonia

I studied a primate community on a tropical rainforest island, in the northernmost area of the Brazilian Amazonia. While walking through six distinct habitats along a 12-km trail, running toward the center of the island—a remote undisturbed area—I collected data on the use of the different forest types and forest strata by the primate community and the formation of either mixed groups or species assemblages. Five species are present: Cebus olivaceus, C. apella, Saimiri sciureus, Ateles belzubuth, and Alouatta seniculus. They seemed to be habitat generalists, using most habitat types. The five species used the higher strata more significantly, probably because Maracá does not present well-defined forest floors, which could be a result of being located in the transition between the great areas of savannah and the Amazonian seasonally dry forests. The five species all formed some polyspecific associations, which involved sharing the available food resource. Mixed groups were significantly more frequent and therefore possibly more important to Saimiri, which was not the case in relation to the other four species. Assemblages, defined as the presence in the same clumped resource, without coordinated activity, of 3 primate species, were recorded primarily in fruiting fig trees. I suggest that assemblages are impelled by food constraints, forcing cofeeding in large seasonal resources, highlighting the ecological importance of figs to these primates. Linear regression models show that the number of feeding bouts in each habitat type is positively related to the number of fruiting trees exploited, but the density of these fruit trees, diversity of plant species, tree height, and total basal area of each habitat type have no relationship to feeding.