Genetic structure and mating system in the palila, an endangered Hawaiian honeycreeper, as assessed by DNA fingerprinting

We conducted DNA fingerprinting analyses to ascertain the mating system and population genetic structure of the palila, an endangered Hawaiian honeycreeper, which occupies a fragmented range on the Mauna Kea volcano of the island of Hawai'i. DNA fingerprinting of twelve complete families from the Pu'u La'au population revealed no evidence of extrapair fertilization or intraspecific brood parasitism. Band-sharing coefficients from fingerprints produced with two probes revealed that the large Pu'u La'au population on the southwest slope of Mauna Kea, and a smaller, geographically separate population on the east slope (at Kanakaleonui) had relatively high and virtually identical levels of minisatellite variability (mean S of 0.27 for each population based on combined data of M13 and Jeffreys 33.15 probes). The two populations also had nearly identical allele frequencies based on their mean corrected similarity, S_ij, of 0.98. These data suggest that the two populations have not been fragmented long and/or have sufficient current gene flow to ameliorate any affects of genetic drift. We conclude that present levels of inbreeding are low within both populations, and that proposed translocations of individuals from Pu'u La'au to Kanakaleonui appear appropriate from a genetic standpoint.     

Connectivity, habitat heterogeneity, and population persistence in Ranunculus nodiflorus, an endangered species in France

Here, we explore the role of habitat spatial structure in the maintenance of metapopulations of Ranunculus nodiflorus. This rare species grows in puddles that can be connected occasionally by flooded corridors. We monitored five locations in the Fontainebleau forest, France, since 2002 and recorded the presence of corridors among puddles and evaluated their impact on puddle demography and plant fitness. We showed that connections increased population size, by increasing both the number of puddles occupied by the species and the density of individuals within puddles, but seemed to have no direct influence on plant fitness. We found no evidence of a large persistent soil seed bank. Natural corridors are likely to decrease the extinction probability of the populations, most probably by allowing recolonization of empty puddles after extinctions. Therefore, the preservation of corridors appears crucial for the conservation of R. nodiflorus in its natural habitat.     

Environmental conditions but not nest composition affect reproductive success in an urban bird

Adjusting the composition of their nests, breeding birds can influence the environmental conditions that eggs and offspring experience. Birds often use feathers to build nests, presumably due to their insulating properties. The amount of feathers in nests is often associated with increased nestling survival and body condition. However, it is unclear whether these putative beneficial effects of adding feathers to nests are relevant in a wide range of environmental conditions. Here, we combine data on weather conditions and feathers in nests (i.e., nest composition) to investigate their relative contribution to reproductive success in the Eurasian tree sparrow (Passer montanus). Specifically, we investigate whether the effect of weather conditions on breeding success is modulated by the amount of feathers added to the nest. We found a strong negative effect of rainfall on the number of nestlings that successfully fledged per breeding attempt, but this negative effect was not mitigated by the amount of feathers in nests. We also found that the amount of feathers in nests varied along the breeding season, with nests containing more feathers early in the breeding season, when temperatures were lower. Despite considerable variation in nest composition, our results do not suggest an important role of feathers in nests protecting eggs or nestling tree sparrows against fluctuations in environmental conditions.     

濒危植物沉水樟的种群生命表和谱分析

将林木依胸径大小分级,以林木径级结构代表年龄结构。采用分段匀滑技术,编制沉水樟种群特定时间生命表,绘制死亡率曲线、危险率曲线及存活曲线,分析沉水樟种群动态趋势。结果表明：沉水樟种群的存活曲线趋于Deevey-Ⅲ型,幼苗和中树稀缺是导致沉水樟濒危的重要原因。沉水樟种群天然更新过程的动态是通过沉水樟不同龄级的株数分布波动而表现的,种群动态的谱分析表明沉水樟种群动态除受基波的影响外,还显示出明显的小周期波动,在11龄级这一小周期波动与沉水樟高生长有关,在15龄级这一小周期的波动可能与沉水樟的生理特性有关。     

Population dynamics of an endangered heathland shrub,Epacris stuartii (Epacridaceae): Recruitment,establishment and survival

The only known population of the endangered shrub Epacris stuartii Stapf was studied from 1994 to 2001 using demographic census techniques. The effects of substrate, a fire and a storm on the emergence and survival of seedlings and the survival of established plants of different sizes were examined using failure‐time analyses and logit‐linear models. Ninety‐five per cent of seedling emergence was delayed until the second post‐fire spring, an unusual response among species with persistent soil seed banks. Mortality of seedlings was extreme compared with larger‐seeded species, but diminished significantly with age. Seedling mortality varied significantly between substrates: 40% of seedlings persisted for more than 5 years in mineral soil, whereas less than 10% lived more than a year on rock and intermediate substrates. However, seedling numbers and local densities were lower on soils than other substrates. Background mortality of established plants was lower on soil and intermediate substrates (0.5% per year) than on rock (3% per year). Small plants may be more susceptible than large plants on rock, but not on soil. Both the fire and the storm resulted in elevated mortality of established plants. The population exhibited a variable response to fire, with plants on rock and intermediate substrates behaving as obligate seeders, whereas plants in soil resprouted. This appears to be the first report of microhabitat variation in fire response at sympatric scales. The effects of the storm were apparently independent of substrate and plant size. The essentially independent disturbance regimes comprising recurring fires and storms are likely to have a profound effect on the long‐term population dynamics of E. stuartii. Over the 7‐year census period, recruitment has failed to compensate for mortality, resulting in a 30% net decline in the population. The demographic census has proved to be crucial in the detection and diagnosis of this decline.     

Double-brooding and annual breeding success of great tits in urban and forest habitats

Urban areas differ from natural habitats in several environmental features that influence the characteristics of animals living there. For example, birds often start breeding seasonally earlier and fledge fewer offspring per brood in cities than in natural habitats. However, longer breeding seasons in cities may increase the frequency of double-brooding in urban compared with nonurban populations, thus potentially increasing urban birds’ annual reproductive output and resulting in lower habitat difference in reproductive success than estimated by studies focusing on first clutches only. In this study, we investigated 2 urban and 2 forests great tit Parus major populations from 2013 to 2019. We compared the probability of double-brooding and the total number of annually fledged chicks per female between urban and forest habitats, while controlling for the effects of potentially confounding variables. There was a trend for a higher probability of double-brooding in urban (44% of females) than in forest populations (36%), although this was not consistent between the 2 urban sites. Females produced significantly fewer fledglings annually in the cities than in the forest sites, and this difference was present both within single- and double-brooded females. Furthermore, double-brooded urban females produced a similar number of fledglings per season as single-brooded forest females. These results indicate that double-brooding increases the reproductive success of female great tits in both habitats, but urban females cannot effectively compensate in this way for their lower reproductive output per brood. However, other mechanisms like increased post-fledging survival can mitigate habitat differences in reproductive success.     

武夷山不同龄级香果树开花物候及其生殖特性

该研究采用固定样地观测研究了不同龄级香果树的开花物候和生殖特性,分析了物候指数与生殖构件之间的相关性。结果表明：香果树单花花期一般为5~9 d,平均为6.79 d,随着树龄增大,其单花花期呈幂函数增长趋势;不同树龄香果树的始花期不同,但终花期基本一致;随着树龄的增大,始花期逐渐提前,花期持续时间延长。20~50 a树龄的香果树始花期约为8月9日,花期持续时间最短,仅为36 d。110~140 a树龄的香果树始花期约为7月15日,花期持续时间为61 d;对于单株母树来讲,香果树的花枝数,花朵总数以及果实总数随着树龄的增大均显著增加;单花枝产花量随着树龄的增加呈上升趋势,单花枝产果实数量呈先上升后下降的趋势;香果树花枝和单花枝产花量在树冠方位上的分布由大到小依次为南>东/西>北、上>中>下,但单花枝果实数量则表现出不同规律,即东>南>西>北、中>下>上。香果树具有花多果少现象,开花物候指数与生殖构件数量间的相关性分析表明,其花期持续时间与花枝数、花数和果实数均存在极显著正相关关系,始花期与生殖构件数量呈极显著负相关关系,而物候指数与香果树树龄亦存在显著相关关系。     

Using genomic information for management planning of an endangered perennial,Viola uliginosa

Species occupying habitats subjected to frequent natural and/or anthropogenic changes are a challenge for conservation management. We studied one such species, Viola uliginosa, an endangered perennial wetland species typically inhabiting sporadically flooded meadows alongside rivers/lakes. In order to estimate genomic diversity, population structure, and history, we sampled five sites in Finland, three in Estonia, and one each in Slovenia, Belarus, and Poland using genomic SNP data with double‐digest restriction site‐associated DNA sequencing (ddRAD‐seq). We found monophyletic populations, high levels of inbreeding (mean population F_SNP = 0.407–0.945), low effective population sizes (N_e = 0.8–50.9), indications of past demographic expansion, and rare long‐distance dispersal. Our results are important in implementing conservation strategies for V. uliginosa, which should include founding of seed banks, ex situ cultivations, and reintroductions with individuals of proper origin, combined with continuous population monitoring and habitat management.     

An inexpensive camera system for monitoring cavity nests

ABSTRACT A variety of pole‐mounted cameras have been developed for monitoring nest cavities. However, currently available camera systems may either be prohibitively expensive or difficult to assemble. I developed an inexpensive (<$500 US) and easily assembled camera system that allows researchers to monitor cavity nests from the ground. The system consists of a small camera, a cable connecting the camera to a ground‐level power source and laptop computer, and a flexible neck connecting the camera to a telescoping pole. During a study of Red‐headed Woodpeckers (Melanerpes erythrocephalus), I used this camera to inspect 16 nests and found that the images were clear and allowed accurate counts of eggs and nestlings. This camera system uses standard, off‐the‐shelf components, and can easily be altered. The design is not appropriate for humid or dense‐canopy environments because of the inclusion of a laptop and its wired design. However, this design makes the system inexpensive and allows researchers to save, edit, and view nest inspection recordings.     

Drivers of the breeding success of American Oystercatchers (Haematopus palliatus frazari) at a critical site in Sinaloa,Mexico

Understanding breeding phenology and success can elucidate population dynamics, which is especially important for species in need of conservation. We describe the factors affecting the breeding biology of American Oystercatchers (Haematopus palliatus frazari) at El Rancho Island, a critical site that contains ~ 7% of the total estimated population, on the coast of Sinaloa, Mexico. We monitored 192 nests over four years (2016–2019). The breeding season lasted from March to June and mean laying dates differed among years, with the mean laying date in 2019 an average of 20 days earlier than in 2016. Clutch sizes decreased as the breeding season progressed. Both breeding success and productivity differed among years, with the lowest values in 2016 (30% hatching success and 0.6 chicks/nest) and the highest in 2019 (66% hatching success and 1.2 chicks/nest). Hatching success was affected by year, laying date, type of habitat, and distance to the high tide line. American Oystercatchers that laid eggs earlier in the season, used mixed marsh and dune habitat, and with nests relatively close to the waterline (< 50 m) had greater breeding success. Overall, however, the breeding success of American Oystercatchers was low and influenced by a combination of several intrinsic and extrinsic factors. Management measures may be required to increase breeding success and ensure the conservation of this subspecies.     

The UK Nest Record Scheme: its value for science and conservation

Capsule A review of its methodology, analytical procedures and uses.

Aims To provide a comprehensive review of the UK Nest Record Scheme (NRS), its methodology and value to science and conservation.

Methods We reviewed the history of the development and current methodology used in the analysis of NRS data in the scientific literature and unpublished documents and from our personal knowledge.

Results The British Trust for Ornithology's (BTO's) NRS is the largest, longest running and most highly computerized such scheme in the world. Advanced and efficient techniques of data gathering, data capture and analysis are used. It was founded in 1939 to provide information on the breeding biology of birds, but has since developed into a key component of the overall monitoring strategy for birds in the UK. A range of specialized analytical methods is available for NRS data and potential biases need careful treatment. More than 250 scientific publications have used NRS data to describe aspects of basic breeding biology and performance, to study the population dynamics of bird populations and to investigate the demographic causes of bird population declines in the UK.

Conclusions Extensive long-term monitoring schemes, such as the NRS, that collate large historical data sets will become increasingly valuable for monitoring the impact of environmental change. While aspects of the NRS, its recording methods, data capture and analysis can be developed further, the scheme will continue to advance our understanding of both the impacts of new environmental stresses in the UK and the effectiveness of new conservation measures in the wider countryside. This has been amply demonstrated by its use for exploring the impacts of global climate change on the UK's avifauna.     

Population dynamics of Macaca sylvanus in Algeria: An 8-year study

The demography and dynamics of two groups, one living in an evergreen cedar-oak forest (Tigounatine) and the other, in a deciduous oak forest (Akfadou) in Algeria, were studied from 1982 to 1990. Group size fell within the range of other wild groups except for the Tigounatine group when it reached 88 individuals before splitting into three new independent groups. The structure of the studied groups, except one which was temporarily “one male,” was comparable to that of other groups of Barbary macaques. There were 43–50% of immatures on average depending on the group. The sex ratio (M:F) of the sexually mature animals was relatively balanced (1:0.9–1.2). The mean age of primiparous females was 5.5 years in Tigounatine and 5.3 in Akfadou; the rate of reproduction of sexually mature females was 0.56 and 0.63, respectively, while the infant mortality rate was 0.23 and 0.38, respectively. Great interannual variations occurred at both sites. The differences between natality and mortality induced a higher intrinsic mean annual increase for the Tigounatine group (14.6%) than for the Akfadou group (4.8%). The rate of intergroup transfers was not correlated with the increase in group size. Integration of male immigrants did not lead to the departure of resident males. Conversely, fission process promoted a substantial increase in the number of transfers in Tigounatine. The period presenting the greatest risk of infant mortality was the summer dry period, in both habitats. Wide interannual variations occurred in the availability of two staple foods for monkeys: caterpillars and acorns. The cumulative effects of a low acorn supply during the gestation period (autumn) and a low caterpillar supply during the beginning of the following nursing period (spring) led to a temporary increase in infant mortality. © 1993 Wiley-Liss, Inc.     

Size-assortative nest choice by the Japanese fluvial sculpin in the presence of male-male competition

Nest choice by the Japanese fluvial sculpin Cottus pollux and its relationship to male reproductive success, was examined in a natural habitat, central Japan. The larger males tended to occupy the deeper nest cavities, suggesting size-assortative nest choice by the species. Stepwise regression analysis showed that cavity area was correlated positively to male reproductive success. Nest choice experiments without a competitive male indicated an absence of size-assortative nest choice, but larger males tended to choose a large nest when another male was present, suggesting that size-assortative nest choice by the species is attributable to male-male competition for large nests, such being related to a resource-defence polygynous mating system.     

Influence of water depth on nest success of the endangered Cape Sable seaside sparrow in the Florida Everglades

The restoration of the Florida Everglades rests largely on the ability of managers to re-create a more natural hydrologic regime throughout the remaining natural areas. The Cape Sable seaside sparrow, an endangered subspecies endemic to the freshwater marl prairies of the Everglades, has suffered from changes in the depth and the timing of water flows through its habitat. However, it remains unclear what temporal and spatial aspects of water inputs (both managed and natural) affect nesting success. We monitored 429 nests in two of the six extant sparrow subpopulations over 10 breeding seasons and a variety of water levels. Using an information-theoretic approach, we find that nests initiated early in the breeding season experience substantially higher success rates than those initiated later. We suggest that this seasonal effect is due to a change in predator abundance or activity levels as the season progresses, which are tied to the increase in water levels that accompany the onset of the wet season. In addition, nest success is influenced to a lesser degree by where sparrows choose to nest across the landscape, the height of base water levels within the sparrow's breeding season and the height of water levels when nests are active. Our observation of extreme variability in nest success over the span of a single season suggests that successful late-season breeding, although shown to be important for population recovery, is a rare event. Management actions that maximize the success of late-season broods or increase the number of early broods are warranted, but the ecosystem implications of such actions are poorly understood.     

The effect of isolation,fragmentation, and population bottlenecks on song structure of a Hawaiian honeycreeper

Little is known about how important social behaviors such as song vary within and among populations for any of the endemic Hawaiian honeycreepers. Habitat loss and non‐native diseases (e.g., avian malaria) have resulted in isolation and fragmentation of Hawaiian honeycreepers within primarily high elevation forests. In this study, we examined how isolation of Hawai'i ‘amakihi (Chlorodrepanis virens) populations within a fragmented landscape influences acoustic variability in song. In the last decade, small, isolated populations of disease tolerant ‘amakihi have been found within low elevation forests, allowing us to record ‘amakihi songs across a large elevational gradient (10–1800 m) that parallels disease susceptibility on Hawai'i island. To understand underlying differences among populations, we examined the role of geographic distance, elevation, and habitat structure on acoustic characteristics of ‘amakihi songs. We found that the acoustic characteristics of ‘amakihi songs and song‐type repertoires varied most strongly across an elevational gradient. Differences in ‘amakihi song types were primarily driven by less complex songs (e.g., fewer frequency changes, shorter songs) of individuals recorded at low elevation sites compared to mid and high elevation populations. The reduced complexity of ‘amakihi songs at low elevation sites is most likely shaped by the effects of habitat fragmentation and a disease‐driven population bottleneck associated with avian malaria, and maintained through isolation, localized song learning and sharing, and cultural drift. These results highlight how a non‐native disease through its influence on population demographics may have also indirectly played a role in shaping the acoustic characteristics of a species.     

Depth of artificial Burrowing Owl burrows affects thermal suitability and occupancy

Many organizations have installed artificial burrows to help bolster local Burrowing Owl (Athene cunicularia) populations. However, occupancy probability and reproductive success in artificial burrows varies within and among burrow installations. We evaluated the possibility that depth below ground might explain differences in occupancy probability and reproductive success by affecting the temperature of artificial burrows. We measured burrow temperatures from March to July 2010 in 27 artificial burrows in southern California that were buried 15–76 cm below the surface (measured between the surface and the top of the burrow chamber). Burrow depth was one of several characteristics that affected burrow temperature. Burrow temperature decreased by 0.03°C per cm of soil on top of the burrow. The percentage of time that artificial burrows provided a thermal refuge from above‐ground temperature decreased with burrow depth and ranged between 50% and 58% among burrows. The percentage of time that burrow temperature was optimal for incubating females also decreased with burrow depth and ranged between 27% and 100% among burrows. However, the percentage of time that burrow temperature was optimal for unattended eggs increased with burrow depth and ranged between 11% and 95% among burrows. We found no effect of burrow depth on reproductive success across 21 nesting attempts. However, occupancy probability had a non‐linear relationship with burrow depth. The shallowest burrows (15 cm) had a moderate probability of being occupied (0.46), burrows between 28 and 40 cm had the highest probability of being occupied (>0.80), and burrows >53 cm had the lowest probability of being occupied (<0.43). Burrowing Owls may prefer burrows at moderate depths because these burrows provide a thermal refuge from above‐ground temperatures, and are often cool enough to allow females to leave eggs unattended before the onset of full‐time incubation, but not too cool for incubating females that spend most of their time in the burrow during incubation. Our results suggest that depth is an important consideration when installing artificial burrows for Burrowing Owls. However, additional study is needed to determine the possible effects of burrow depth on reproductive success and on possible tradeoffs between the effects of burrow depth on optimal temperature and other factors, such as minimizing the risk of nest predation.