Anaesthesia and transport of juvenile tambaqui Colossoma macropomum (Cuvier, 1818) with tricaine methane‐sulphonate: Implications on secondary and oxidative stress responses

The aim of this study was to evaluate the anaesthetic efficacy and the effect of sedation with tricaine (TMS^®), also known as MS‐222, on secondary and oxidative stress parameters in juvenile tambaqui, Colossoma macropomum transported in hyperoxia for 2, 6 and 10 hr. Juveniles were placed in aquaria containing six different concentrations of buffered tricaine (150, 180, 210, 240, 270 and 300 mg/L) and the times for anaesthesia induction and recovery determined. Fish transported in hyperoxic conditions were investigated for glycemia, ionic concentration (K⁺, Ca⁺⁺, Na⁺) and osmolality, haematocrit (Ht) and haemoglobin concentration (Hb), partial pressure of gases (pCO₂ and pO₂), pH and bicarbonate concentration () in whole blood collected from caudal vasculature. Total antioxidant capacity against peroxyl radicals (ACAP), glutathione‐S‐transferase (GST) activity and lipid peroxidation levels (TBARS) were investigated in gills, brain and liver. All concentrations of TMS^® induced deep anaesthesia in juvenile tambaqui in this study. A concentration of 240 mg/L of TMS^® was sufficient to induce rapid anaesthesia (<3 min) with uneventful recovery (<5 min). In light of the secondary and oxidative stress responses of fish transported using TMS^®, which were generally not significantly different compared to responses of fish transported in anaesthetic‐free water, sedation with 20 mg/L is not advantageous and therefore is dispensable for the transport of this species for up to 10 hr.     

Gastric evacuation in endangered Russian sturgeon (Acipenser gueldenstaedtii): Effects of body and meal sizes

This study aimed to parameterize the effects of body and meal sizes on the gastric evacuation (GE) of farmed Russian sturgeon (Acipenser gueldenstaedtii) fed on live food (whiting fish) or commercial pellets. The radiography technique was used to monitor the evacuation of food from the stomach into the intestine at postprandial time. Acipenser gueldenstaedtii of different body sizes (total length ranged 82–105 cm) were fed on meal sizes ranged from 23 to 72 g composed of either live food or commercial pellets (had a 20% of BaSO₄ as a radiopaque material). The square root model was found to adequality describe the process of GE in A. gueldenstaedtii independently of meal type and size. The effects of fish size on GER was described by simple power model and can be summarized by , where ρ_L was 0.000053 for live food and 0.000062 for commercial pellets (estimated from combined GE data), S_t is stomach contents (g), L is fish total length (cm) and t is time (h). The results of this study will provide a useful tool to estimate the stomach fullness of A. gueldenstaedtii at postprandial time t. Such information should assess the feeding strategy to minimize feed wastage and optimize the fish growth.     

Demogenetic structure of brown trout Salmo trutta Linnaeus, 1758 populations in mountain headwaters: implications for conservation management

A demogenetic analysis based on 7 years of observation (2005–2011) was conducted to examine the population structure of brown trout Salmo trutta in pristine dendritic headwaters. The value of genetic divergence (F_ST) among sampling units ranged from ?0.03 to 0.16. Demographic synchrony was low or moderate, and the average correlation coefficient of population growth between sampling units () ranged from 0.28 to 0.66. No isolation by distance was observed, but genetic divergence was negatively correlated with demographic synchrony among sampling units. Variance in the population growth rate (i.e. local extinction probability) increased with distance from the mainstream and from other sampling units. In contradiction with the usual model of stream‐dwelling salmonids, the upstream sections of headwaters holds only ephemeral subpopulations, whereas the mainstream played a role in the source area of the metapopulation. These findings stress the importance of the mainstream in management conservation for brown trout in low productive mountain headwaters.     

Nitrogen fixation by the diazotroph Cylindrospermopsis raciborskii (Cyanophyceae)

Nitrogen fixation has been proposed as a mechanism that allows the diazotrophic cyanobacterium, Cylindrospermopsis raciborskii, to bloom in nitrogen‐limited freshwater systems. However, it is unclear whether dinitrogen fixation (N₂ fixation) can supplement available dissolved inorganic nitrogen (DIN) for growth, or only provides minimum nitrogen (N) for cell maintenance under DIN deplete conditions. Additionally, the rate at which cells can switch between DIN use and N₂ fixation is unknown. This study investigated N₂ fixation under a range of nitrate concentrations. Cultures were grown with pretreatments of nitrate replete (single dose 941 μmol  · L^?1) and N‐free conditions and then either received a single dose of 941 μmol  · L^?1 (N941), 118 μmol  · L^?1 (N118) or 0 N. Heterocysts appeared from days 3 to 5 when treatments of high were transferred to N free media (N941:N0), and from day 5 in N941 transferred to N118 treatments. Conversely, transferring cells from N0 to N941 resulted in heterocysts being discarded from day 3 and day 5 for N0:N118. Heterocyst appearance correlated with a detectable rate of N₂ fixation and up‐regulation of nifH gene expression, the discard of heterocysts occurred after sequential reduction of nifH expression and N₂ fixation. Nitrate uptake rates were not affected by pretreatment, suggesting no regulation or saturation of this uptake pathway. These data demonstrate that for C. raciborskii, N₂ fixation is regulated by the production or discard of heterocysts. In conclusion, this study has shown that N₂ fixation only provides enough N to support relatively low growth under N‐limited conditions, and does not supplement available nitrate to increase growth rates.     

HEMOGLOBIN POLYMORPHISMS IN DEER MICE (PEROMYSCUS MANICULATUS): PHYSIOLOGY OF BETA-GLOBIN VARIANTS AND ALPHA-GLOBIN RECOMBINANTS

Wild populations of deer mice (Peromyscus maniculatus) contain hemoglobin polymorphisms at both alpha-globin (Hba, Hbc) and beta-globin (Hbd) loci. Population gene frequencies of beta-globin variants (d⁰ and d¹ haplotypes) are not correlated with altitude, whereas a¹c¹ alpha-globin haplotypes are fixed in low-altitude populations, and a⁰c⁰ haplotypes reach near fixation at high altitudes. We examined the effects of alpha- and beta-globin variants on blood oxygen affinity and on aerobic performance, measured as maximum oxygen consumption (). Exercise and cold exposure were used to elicit . Experiments were performed at low (340 m) and high (3,800 m) altitude to include the range of oxygen partial pressures encountered by wild deer mice. Beta-globin variants had little effect on blood oxygen affinity or . Oxygen-dissociation curves from a⁰c⁰ and a¹c¹ homozygotes and heterozygotes had similar shapes, but the P₅₀ of a⁰c⁰ homozygotes was significantly lower than that of other genotypes. Mice carrying a¹c¹/a¹c¹ genotypes had the highest at low altitude, but mice with a⁰c⁰/a⁰c⁰ genotypes had the highest at high altitude. Mice carrying rare recombinant alpha-globin haplotypes (a⁰c¹) had lower than nonrecombinant genotypes as a whole but in most cases were not significantly different from nonrecombinant heterozygotes (a⁰c⁰/a¹c¹). We conclude that genetic adaptation to different altitudes was important in the evolution of deer mouse alpha-globin polymorphisms and in the maintenance of linkage disequilibrium in the alpha-globin loci but was not a significant factor in the evolution of beta-globin polymorphisms.     

Rates and pathways of CH4 oxidation in ferruginous Lake Matano,Indonesia

This study evaluates rates and pathways of methane (CH₄) oxidation and uptake using ¹⁴C‐based tracer experiments throughout the oxic and anoxic waters of ferruginous Lake Matano. Methane oxidation rates in Lake Matano are moderate (0.36 nmol L^?1 day^?1 to 117 μmol L^?1 day^?1) compared to other lakes, but are sufficiently high to preclude strong CH₄ fluxes to the atmosphere. In addition to aerobic CH₄ oxidation, which takes place in Lake Matano's oxic mixolimnion, we also detected CH₄ oxidation in Lake Matano's anoxic ferruginous waters. Here, CH₄ oxidation proceeds in the apparent absence of oxygen (O₂) and instead appears to be coupled to some as yet uncertain combination of nitrate (), nitrite (), iron (Fe) or manganese (Mn), or sulfate () reduction. Throughout the lake, the fraction of CH₄ carbon that is assimilated vs. oxidized to carbon dioxide (CO₂) is high (up to 93%), indicating extensive CH₄ conversion to biomass and underscoring the importance of CH₄ as a carbon and energy source in Lake Matano and potentially other ferruginous or low productivity environments.     

Temperature response of denitrification rate and greenhouse gas production in agricultural river marginal wetland soils

Soils are predicted to exhibit significant feedback to global warming via the temperature response of greenhouse gas (GHG) production. However, the temperature response of hydromorphic wetland soils is complicated by confounding factors such as oxygen (O₂), nitrate () and soil carbon (C). We examined the effect of a temperature gradient (2–25 °C) on denitrification rates and net nitrous oxide (N₂O), methane (CH₄) production and heterotrophic respiration in mineral (Eutric cambisol and Fluvisol) and organic (Histosol) soil types in a river marginal landscape of the Tamar catchment, Devon, UK, under non‐flooded and flooded with enriched conditions. It was hypothesized that the temperature response is dependent on interactions with ‐enriched flooding, and the physicochemical conditions of these soil types. Denitrification rate (mean, 746 ± 97.3 μg m^?2 h^?1), net N₂O production (mean, 180 ± 26.6 μg m^?2 h^?1) and net CH₄ production (mean, 1065 ± 183 μg m^?2 h^?1) were highest in the organic Histosol, with higher organic matter, ammonium and moisture, and lower concentrations. Heterotrophic respiration (mean, 127 ± 4.6 mg m^?2 h^?1) was not significantly different between soil types and dominated total GHG (CO₂eq) production in all soil types. Generally, the temperature responses of denitrification rate and net N₂O production were exponential, whilst net CH₄ production was unresponsive, possibly due to substrate limitation, and heterotrophic respiration was exponential but limited in summer at higher temperatures. Flooding with increased denitrification rate, net N₂O production and heterotrophic respiration, but a reduction in net CH₄ production suggests inhibition of methanogenesis by or N₂O produced from denitrification. Implications for management and policy are that warming and flood events may promote microbial interactions in soil between distinct microbial communities and increase denitrification of excess with N₂O production contributing to no more than 50% of increases in total GHG production.     

Microbial diversity and activity in seafloor brine lake sediments (Alaminos Canyon block 601, Gulf of Mexico)

The microbial communities thriving in deep‐sea brines are sustained largely by energy rich substrates supplied through active seepage. Geochemical, microbial activity, and microbial community composition data from different habitats at a Gulf of Mexico brine lake in Alaminos Canyon revealed habitat‐linked variability in geochemistry that in turn drove patterns in microbial community composition and activity. The bottom of the brine lake was the most geochemically extreme (highest salinity and nutrient concentrations) habitat and its microbial community exhibited the highest diversity and richness indices. The habitat at the upper halocline of the lake hosted the highest rates of sulfate reduction and methane oxidation, and the largest inventories of dissolved inorganic carbon, particulate organic carbon, and hydrogen sulfide. Statistical analyses indicated a significant positive correlation between the bacterial and archaeal diversity in the bottom brine sample and inventories. Other environmental factors with positive correlation with microbial diversity indices were DOC, H₂S, and DIC concentrations. The geochemical regime of different sites within this deep seafloor extreme environment exerts a clear selective force on microbial communities and on patterns of microbial activity.     

Detection of,and sampling procedures for,the citrus blackfly in urban southern Florida

The dispersion pattern of the citrus blackfly (CBF)Aleurocanthus woglumi Ashby on urban citrus trees was studied in southern Florida. There was no usable correlation (r²=0.41) between the % of older leaves infested with CBF versus that on the newest mature flush, but there was a strong correlation (r²=0.87) between the % of leaves in the newest mature flush infested with CBF and log_e, where is the number of egg spirals of CBF/leaf on the same leaves. CBF egg spirals are distributed among the flushes in groups rather than singly and the flushes are not over-dispersed. Visual surveys proved superior to sticky traps for the detection of CBF at low densities (<5% leaves infested) on citrus trees in an urban setting. A sampling procedure is described herein based upon visual surveys.     

Ordinary stoichiometry of extraordinary microorganisms

All life on Earth seems to be made of the same chemical elements in relatively conserved proportions (stoichiometry). Whether this stoichiometry is conserved in settings that differ radically in physicochemical conditions (extreme environments) from those commonly encountered elsewhere on the planet provides insight into possible stoichiometries for putative life beyond Earth. Here, we report measurements of elemental stoichiometry for extremophile microbes from hot springs of Yellowstone National Park (YNP). Phototrophic and chemotrophic microbes were collected in locations spanning large ranges of temperature (24 °C to boiling), pH (1.6–9.6), redox (0.1–7.2 mg L^?1 dissolved oxygen), and nutrient concentrations (0.01–0.25 mg L^?1 , 0.7–12.9 mg L^?1 , 0.01–42 mg L^?1 NH₄⁺, 0.003–1.1 mg L^?1 P mostly as phosphate). Despite these extreme conditions, the microbial cells sampled had a major and trace element stoichiometry within the ranges commonly encountered for microbes living in the more moderate environments of lakes and surface oceans. The cells did have somewhat high C:P and N:P ratios that are consistent with phosphorus (P) limitation. Furthermore, chemotrophs and phototrophs had similar compositions with the exception of Mo content, which was enriched in cells derived from chemotrophic sites. Thus, despite the extraordinary physicochemical and biological diversity of YNP environments, life in these settings, in a stoichiometric sense, remains much the same as we know it elsewhere.     

Satiation meal and the effects of meal and body sizes on gastric evacuation rate in brook trout Salvelinus fontinalis fed commercial pellets

Gastric evacuation (GE) experiments were performed on brook trout Salvelinus fontinalis fed commercial food pellets. The experiments included small fish (36 g; 15 cm total length, L_T) fed meals of 0·2, 0·4 and 0·8 g and large fish (152 g; 23 cm) fed meals of 0·8, 2·0 and 4·0 g at temperatures ranging from 15·1 to 18·2° C. The stomach contents were thereafter sampled and weighed at 3 h intervals until the first empty stomach was observed. The course of GE was examined by use of a general power function of the data that revealed that the square‐root function described the GE rate (GER) by the current stomach content mass independently of original meal size. Using the square‐root function, the relationship between GER and fish size was described by a power function of fish length, whereas the effect of temperature was described by a simple exponential function. GER of the commercial pellets fed to S. fontinalis could thus be described by (g h^?1), where S_t is stomach mass (g) at time t (h), L is total fish length (cm) and T is temperature (° C). The result of this study should provide a useful tool for planning of feeding regimes in production of S. fontinalis by optimizing growth and minimizing food waste.     

Spectroscopic investigations of Er(3+) :CdO-Bi(2) O(3) -B(2) O(3) glasses

This article reports on the optical properties of Er³⁺ ions doped CdO–Bi₂O₃–B₂O₃ (CdBiB) glasses. The materials were characterized by optical absorption and emission spectra. By using Judd–Ofelt theory, the intensity parameters Ω_λ (λ = 2, 4, 6) and also oscillatory strengths were calculated from the absorption spectra. The results were used to compute the radiative properties of Er³⁺:CdBiB glasses. The concentration quenching and energy transfer from Yb³⁺–Er³⁺ were explained. The stimulated emission cross‐section, full width at half maximum (FWHM) and FWHM × values are also calculated for all the Er³⁺:CdBiB glasses. Copyright © 2011 John Wiley & Sons, Ltd.     

Exploring the capabilities of fluorometric online monitoring on chinese hamster ovary cell cultivations producing a monoclonal antibody

Online monitoring of Chinese hamster ovary fed‐batch cell cultures via two‐dimensional fluorescence spectroscopy (2DFS) was evaluated in this work. Particular attention was directed toward different process strategies regarding the use of nutrient‐rich feed media and temperature shifts. These intentionally performed process manipulations broadened the variances in the obtained fluorescence spectra and this was suspected to hamper the generation of reliable soft sensors. Principal component analysis of the obtained fluorescence data showed that temperature shift and feeding strategy had a considerable impact on the fluorescence signals. Partial least square regression models were calculated for the prediction of glucose, lactate, monoclonal antibody (mAb), and viable cell concentrations (VCC). It was aimed to integrate all 2DFS datasets in the respective calibration models regardless of the process‐strategy‐dependent diversity. Contrary to the expectations, it was feasible to calibrate soft sensors for the online prediction of glucose (7 latent variables (LVs), = 0.97, rout mean squared error of prediction (RMSEP) = 1.1 g L^?1), lactate (5 LV; = 0.96; RMSEP = 0.5 g L^?1) and mAb concentrations (4 LV; = 0.99; RMSEP = 11.4 mg L^?1). Feeding and temperature shifts had the highest impact on the VCC model (3 LV; = 0.94; RMSEP 3.8 × 10⁵ mL^?1), nevertheless the prediction of VCC from the fed‐batch 2DFS data was feasible. The results strongly indicate that variances in the datasets due to the process strategy can be tolerated to some extent by the respective soft sensors. © 2016 American Institute of Chemical Engineers Biotechnol. Prog., 32:1592–1600, 2016     

Age and growth of mangrove red snapper Lutjanus argentimaculatus at its cool‐water‐range limits

This study investigates the age and growth of Lutjanus argentimaculatus at its southern (cooler) range limits in eastern Australia. Specimens were collected from New South Wales and southern Queensland between November 2011 and December 2013. Fork lengths (L_F) ranged from 190 to 1019 mm, and ages ranged from 2+ to 57+ years. Growth was described by the von Bertalanffy growth function with coefficients L_∞ = 874·92 mm, K = 0·087 year^?1 and t₀ = ?2·76 years. Estimates of the instantaneous natural mortality rate (M) ranged from 0·072 to 0·25. The L_F (mm) and mass (W; g) relationship was represented by the equation: . The maximum age of 57+ years is the oldest reported for any lutjanid and comparisons with tropical studies suggest that the age‐based demography of L. argentimaculatus follows a latitudinal gradient. High maximum ages and low natural mortality rates indicate considerable vulnerability to overexploitation at the species' cool‐water‐range limits. These results demonstrate the need to identify underlying processes driving latitudinal gradients in fish demography.     

Reproductive biology of female bigeye tuna Thunnus obesus in the western Pacific Ocean

The reproductive biology of female bigeye tuna Thunnus obesus was assessed by examining 888 fish (ranging from 84·9 to 174·4 cm fork length, L_F) caught by Taiwanese offshore longliners in the western Pacific Ocean from November 1997 to November 1998 and November to December 1999 and 258 gonad samples from these fish. The overall sex ratio of the catch during the sampling differed significantly from 0·5, but males were predominant in sizes >140 cm L_F. Reproductive activity (assessed by histology), a gonado‐somatic index, and the size‐frequency distributions of whole oocytes indicated that spawning occurred throughout the year and the major spawning season appeared to be from February to September. The estimated sizes at 50% maturity (L_F50) of females was 102·85 cm (95% c.i .: 90·79–110·21 cm) and the smallest mature female was 99·7 cm L_F. They are multiple spawners and oocytes develop asynchronously. The proportion of mature (0·63) and reproductively active (0·70) females with ovaries containing postovulatory follicles indicated that they spawn almost daily. Batch fecundity for 15 females with the most advanced oocytes (>730 µm) ranged from 0·84 to 8·56 million eggs (mean ± s.d . = 3·06 ± 2·09). The relationships between batch fecundity (F_B, in millions of eggs) and L_F (cm) and round mass (M_R, kg) were (r² = 0·84) and (r² = 0·80), respectively. The parameters estimated in this study are key information for stock assessments of T. obesus in the western Pacific Ocean and will contribute to the conservation and sustainable yield of this species.     

Nonlinear response of stream ecosystem structure to low‐level phosphorus enrichment

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THE MAINTENANCE OF POLYGENIC VARIATION IN FINITE POPULATIONS

Models of the maintenance of genetic variance in a polygenic trait have usually assumed that population size is infinite and that selection is weak. Consequently, they will overestimate the amount of variation maintained in finite populations. I derive approximations for the equilibrium genetic variance, in finite populations under weak stabilizing selection for triallelic loci and for an infinite “rare alleles” model. These are compared to results for neutral characters, to the “Gaussian allelic” model, and to Wright's approximation for a biallelic locus under arbitrary selection pressures. For a variety of parameter values, the three-allele, Gaussian, and Wrightian approximations all converge on the neutral model when population size is small. As expected, far less equilibrium genetic variance can be maintained if effective population size, N, is on the order of a few hundred than if N is infinite. All of the models predict that comparisons among populations with N less than about 10⁴ should show substantial differences in . While it is easier to maintain absolute when alleles interact to yield dominance or overdominance for fitness, less additivity also makes more susceptible to differences in N. I argue that experimental data do not seem to reflect the predicted degree of relationship between N and . This calls into question the ability of mutation-selection balance or simple balancing selection to explain observed . The dependence of on N could be used to test the adequacy of mutation-selection balance models.     

Precision of the age–length increments of three cyprinids: effects of fish number and sub‐sampling strategy

The effects of number of fish that are aged and scale sub‐sampling strategies on the precision of estimates of mean age–length increments from populations of Rutilus rutilus, Leuciscus leuciscus and Leuciscus cephalus were tested. Analyses used data derived from river fish communities in eastern England, U.K.. Regarding the number of fishes analysed in each age group, for each species and mean fork‐length increment at age, significant relationships were detected between sample size (n) and the coefficient of variation of the mean (Z) and mean length increment and measured variance (s²). This enabled calculation of the number of scales for producing a mean length increment at age according to . Outputs indicated that the number of scales requiring ageing increased substantially as precision increased, but with little variation between species per age category. Ageing between seven and 12 scales per age group would thus provide estimates at 10% precision. As the ages of fishes are not known in advance of scale ageing, the effect of scale sub‐sampling regime on precision was also tested using randomized strategies of 10 fish per 5 mm, five per 5 mm, three per 5 mm, 10 per 10 mm, five per 10 mm and three per 10 mm. These were applied to the datasets and the consequences of their reduction in the number of scales for precision were determined using . When compared to no sub‐sampling, three per 10 mm always significantly reduced data precision, whereas 10 per 5 mm never significantly reduced precision. These outputs can thus be applied to the design of fish sampling protocols where age and growth estimates are required, with the randomized sub‐sampling likely to be the most useful strategy.     

Studies on the antioxidant activity of some thiazolidinedione,imidazolidinedione and rhodanine derivatives having a flavone core

A series of flavonyl‐2,4‐thiazolidinedione, imidazolidinedione and rhodanine derivatives were tested for their antioxidant activity as scavengers of oxygen free radicals. Free radical scavenging activities, including superoxide anion radical , hydroxyl radical (HO^?) and 2,2′‐diphenyl‐1‐picrylhydrazyl free radical have been evaluated using chemiluminescence, electron paramagnetic resonance and spin trapping with 5,5‐dimethyl‐1‐pyrroline‐1‐oxide as a spin trap. Potassium superoxide in dimethylsulfoxide and 18‐crown‐6 ether were used for the production of . Hydroxyl radical was generated using the Fenton reaction. Ten of the eleven examined compounds exhibited decrease in chemiluminescence, but there were large differences in the decrease, ranging from 16% to 89%; also, two of these compounds increased light emission by about 200%. On the contrary, all compounds tested exhibited 30–68% scavenging HO^? and 25–96% scavenging the DPPH^? radical respectively. Possible mechanisms are proposed to explain the results. Copyright © 2014 John Wiley & Sons, Ltd.     

Dactylogyrids on the gills of roach in central Finland: features of infection and species composition.

Monogenean parasites were examined from the gills of 660 roach (Rutilus rutilus) in four interconnected lakes in Central Finland between February and November 1986 and in three of the same lakes between February and December 1988. One of the lakes is eutrophic and polluted due to a paper and pulp mill, one is oligotrophic and in a natural state, and the other two lakes are eutrophic. The prevalence of Dactylogyrus infection was always high. Differences between the lakes and the years were observed in the intensity of infection, which was significantly higher in the polluted lake. The intensity was also higher in older fish. Nine Dactylogyrus species were found, and of these D. crucifer and D. nanus were numerically dominant in all of the lakes studied, especially in the oligotrophic lake. In 1986 D. fallax, D. similis and D. suecicus constituted significant proportions of the fauna in the polluted lake. D. micracanthus was most common in the eutrophic lakes. In 1988 the species composition in the polluted lake was most similar to that in the eutrophic lake.