Soil conduciveness to take-all of wheat: Influence of the nitrogen fertilizers on the structure of populations of fluorescent pseudomonads

In a field cropped with wheat, a high and low level of soil conduciveness to take-all were induced by applying a nitrogen fertilizer with either calcium nitrate or ammonium sulphate. From these two soils, two representative populations of fluorescent pseudomonads were tested for their in situ behaviour. Take-all index and root dry weight were assessed on plants cropped in soils infested with Gaeumannomyces graminis var tritici (Ggt) and each bacterized with one of the isolates of fluorescent pseudomonads. The bacteria tested can be split into three groups: antagonists which reduce take-all, deleterious isolates which aggravate the disease and neutral without evident effect on the disease. The predominance of antagonistic fluorescent pseudomonads in the NH₄-treated soil and the predominance of deleterious ones in the NO₃-treated soil was confirmed after statistical analysis. The microbial impact on take-all must be more considered as the resulting effect of divergent activities of both rhizobacteria types than the only consequences of the presence of antagonistic pseudomonads. All the high cyanogenic pseudomonads were antagonists in situ and were more numerous in the NH₄-treated soil than in the NO₃-treated soil.     

Effect of one year rotational set-aside on immediate and ensuing nitrogen leaching loss

This paper reports results from a 3-year field experiment which examined Nitrogen (N) leaching loss from land under various set-aside managements. Four treatments were examined: three ploughed plots which were sown with wheat, ryegrass or maintained fallow; the fourth treatment was unploughed and natural weed growth (volunteers) permitted. The l-year set-aside was followed by two winter wheat test crops. Ceramic suction cups were installed at a depth of 90 cm and used to collect drainage water. N leaching loss was calculated by multiplying drainage volume, calculated from meteorological data, by its inorganic N concentration.Set-aside management significantly affected N leaching loss over the three years. During the set-aside year, the peak nitrate concentration from the unploughed treatment growing volunteer weeds was significantly lower than that from ploughed plots. Of the latter, by the spring, crop (i.e. wheat and ryegrass) assimilation of N significantly reduced N concentration compared to the fallow. The four set-aside treatments had a carry-over effect to the following year (first wheat test crop) resulting in significant differences in N losses. Leaching following the ryegrass treatment was very small and we believe that the grass residues minimised rates of net-N mineralization.The influence of set-aside management continued to the second wheat test crop where N loss was greater under the all wheat rotation because take-all had reduced yield and therefore crop N uptake.     

Effects of take-all (Gaeumannomyces graminis var. tritici) on crop N uptake and residual mineral N in soil at harvest of winter wheat

Background and aims

Take-all, caused by the fungus Gaeumannomyces graminis var. tritici, is the most damaging root disease of wheat. A severe attack often leads to premature ripening and death of the plant resulting in a reduction in grain yield and effects on grain quality (Gutteridge et al. in Pest Manag Sci 59:215–224, 2003). Premature death of the plant could also lead to inefficient use of applied nitrogen (Macdonald et al. in J Agric Sci 129(2):125–154, 1997). The aim of this study was to determine crop N uptake and the amount of residual mineral N in the soil after harvest where different severities of take-all had occurred.

Methods

Plant and soil samples were taken at anthesis and final harvest from areas showing good and poor growth (later confirmed to be caused by take-all disease) in three winter wheat crops grown on the same soil type on Rothamsted Farm in SE England in 1995, 2007 and 2008 (harvest sampling only). All crops received fertiliser N in spring at recomended rates (190–200?kg?N ha^?1). On each ocassion crops were assessed for severity of take-all infection (TAR) and crop N uptakes and soil nitrate plus ammonium (SMN) was determined. Grain yields were also measured.

Results

Grain yields (at 85% dry matter) of crops with moderate infection (good crops) ranged from 4.3 to 13.0?t ha^?1, compared with only 0.9–4.5?t ha^?1 for those with severe infection (poor crops). There were significant (P?<?0.05) negative relationships between crop N uptake and TAR at anthesis and final harvest. At harvest, good crops contained 129–245?kg?N ha^?1 in grain, straw and stubble, of which 85–200?kg?N ha^?1 was in the grain. In contrast, poor crops contained only 46–121?kg?N ha^?1, of which only 22–87?kg?N ha^?1 was in the grain. Positive relationships between SMN and TAR were found at anthesis and final harvest. The SMN in the 0–50?cm layer following harvest of poor crops was significantly (P?<?0.05) greater than that under good crops, and most (73–93%) was present as nitrate.

Conclusions

Localised patches of severe take-all infection decreased the efficiency with which hexaploid wheat plants recovered soil and fertiliser derived N, and increased the subsequent risk of nitrate leaching. The risk of gaseous N losses to the atmosphere from these areas may also have been enhanced.     

Solarization in a forest nursery: effect on ectomycorrhizal soil infectivity and soil receptiveness to inoculation with Laccaria bicolor

 Field experiments were carried out in a forest nursery during the summer of 1994 to examine the effect of soil solarization on ectomycorrhizal soil infectivity (ESI) and soil receptiveness to inoculation with Laccaria bicolor. Soil samples from solarized, steamed, fumigated and untreated plots were periodically collected and assayed for ESI. Untreated soil exhibited high ESI. Solarization was as effective as steaming or fumigation in reducing ESI in the uppermost layer. Solarization with a double layer of polyethylene film and fumigation were the only treatments which reduced ESI deeper in the soil. During July, the temperature of covered beds reached 50  °C at a soil depth of 5 cm. Ectomycorrhizal fungi were among the soil-borne fungi most sensitive to solar heating. Soil solarization provides an effective disinfection method for controlled mycorrhization in forest nurseries. Accepted: 10 April 1997     

Response of the root system of a winter wheat crop to waterlogging

This study was aimed at analysing and quantifying the response of the root system dynamics of a wheat crop to waterlogging. Two experiments were carried out in parallel: one under controlled conditions with semi-permanent water tables using lysimeters equipped with oxygen measurers, and the other under conditions of artificially drained plots by continually monitoring their hydraulic functioning. The root system was observed frequently using the root mapping method, and this made it possible to measure the growth of the root front, to estimate root densities, and infer growth indices from them. The results showed that the anoxic medium for wheat roots consisted of a water-saturated soil with an oxygen concentration of below a critical threshold estimated to be 0.12 mol m^–3 water. The results also showed that the area which was unfavourable to root growth corresponded to the water table topped with a capillary zone of approximately 6 cm. Once the critical threshold had been reached, it was the water-table duration that explained root behaviour and the first effects were perceptible after approximately 48 h. On the basis of these results, two stress variables were analysed: water-table duration in the root zone (WTD) and proportion of roots in the water table (RPWT). The RPWT variable gave the best results within the two experimental contexts. In the case of the permanent regime, this variable made it possible to consider the root proliferation observations made above the saturated zone. Equations linking the stress variable RPWT to the growth indices are proposed that offer new perspectives to modelling waterlogging effects.     

Changes in soil mineral nitrogen during and after 3-year and 5-year set-aside and nitrate leaching losses after ploughing out the 5-year plant covers in the UK

The management and effects of 3-year and 5-year set-aside covers on soil mineral nitrogen (SMN, 0.0–0.9 m) were studied at six sites in England. Soil mineral N was measured annually in autumn and spring during the period of set-aside cover, with more frequent SMN sampling over the first winter after ploughing out the covers. Spring SMN was measured in the second year after set-aside. Nitrate leaching losses were also measured at three sites in the first winter after destruction of the 5-year set-aside covers. Winter cereals were grown in both test years after each set-aside period.Amounts of both autumn and spring SMN in the perennial rye-grass (PRG), perennial rye-grass/white clover (PRG/WC) and natural regeneration (NR) covers were generally less than, or similar to those in the continuous arable treatment during each year of set-aside, indicating a slightly smaller nitrate leaching risk under set-aside management. Slight increases in autumn SMN, and hence leaching potential were, however, observed under PRG/WC in the fourth and fifth years, compared with continuous arable cropping.Ploughing out of both 3-year and 5-year covers increased soil N supply and potential nitrate leaching losses over winter, compared with continuous arable cropping. By the following spring, mean increases across all sites in amounts of SMN after 3-year covers of PRG, NR and PRG/WC were 14, 18 and 33 kg ha^–1 N, respectively, compared with the arable rotation. Equivalent increases in spring SMN following destruction of the 5-year set-aside covers were almost identical, at 17, 19 and 33 kg ha^–1, respectively, although only the ploughed-out PRG/WC covers increased SMN at the clay sites. Measured nitrate leaching losses in the first winter after 5-year set-aside were greatest after PRG/WC at two sites on shallow chalk but greatest after NR, which had a naturally large clover content, at the third site which was on a sandy soil. However, the leaching losses after set-aside were relatively small, relative to typical losses after ploughing out intensively managed grass or grass/clover swards, and would have been compensated for by potentially less leaching during set-aside.Spring SMN measurements in the second year after ploughing out the set-aside covers, showed negligible or, for PRG/WC, only slight increases (12 – 18 kg ha^–1) in residual soil N supply after both 3-year and 5-year covers, compared to continuous arable cropping. The extra N mineralisation after cover destruction justified small reductions in fertiliser N inputs for the first, but not second crop following either 3- or 5-year set-aside, unless the cover had contained a large clover content. Both 3-year and 5-year set-aside covers had minimal or no effect on either organic matter content, apart from a slight increase in the PRG/WC treatments, or extractable phosphorus, potassium and magnesium status in the topsoil.     

Effects of legumes on soil physical quality in a maize crop

The effect of intercropped legumes and three N fertilizer rates in a continuous maize (Zea mays L.) cropping system on the physical properties of two soils were investigated for three years. The legumes, being a mixture of alfalfa, clover and hairy vetch, had a significant cumulative effect on some physical properties of both soil. The lowest stability and smallest mean weight diameter of soil aggregates were associated with monoculture maize plots. Aggregate size and stability were not affected by N fertilization at any of the rates of 0, 70, and 140 kg ha^-1 in intercropped plots, except that aggregate stability was actually reduced by N fertilization in one soil, the Ste. Rosalie clay. In maize plots in both soils, stability and size of soil aggregates were significantly increased with increased added N. Intercropped legumes significantly decreased dry bulk density and soil penetration resistance. Added N had no measurable influence on these compaction factors. Soil water properties were not significantly affected by either intercropping or N fertilization. Positive effects noted on soil aggregation and other physical properties in intercropped plots are the result of enhanced root activity, or incorporation of legumes as green manure, or both. Improvement of soil structure in maize plots associated with increasing N application was the result of increased maize-root residues.     

Role of antibiotics and siderophores in biocontrol of take-all disease of wheat

Both antibiotics and siderophores have been implicated in the control of soilborne plant pathogens by fluorescent pseudomonads. In Pseudomonas fluorescens 2–79, which suppresses take-all of wheat, the importance of the antibiotic phenazine-1-carboxylic acid was established with mutants deficient or complemented for antiobiotic production and by isolation of the antibiotic from the roots of wheat colonized by the bacteria. Genetic and biochemical studies of phenazine synthesis have focused on two loci; the first is involved in production of both anthranilic acid and phenazine-1-carboxylic acid, and the second encodes genes involved directly in phenazine synthesis. Because the antibiotic does not account fully for the suppressiveness of strain 2-79, additional mutants were analyzed to evaluate the role of the fluorescent siderophore and of an antifungal factor (Aff, identified as anthranilic acid) that accumulates when iron is limiting. Whereas strains producing only the siderophore conferred little protection against take-all, Aff⁺ strains were suppressive, but much less so than phenazine-producing strains. Iron-regulated nonsiderophore antibiotics may be produced by fluorescent pseudomonads more frequently than previously recognized, and could be partly responsible for beneficial effects that were attributed in the past to fluorescent siderophores.     

Effects of seed-bed conditions on slug numbers and damage to winter wheat in a clay soil

In a field experiment three levels of consolidation were combined with three seed-bed tilths, to produce nine different types of seed-bed. The soil properties of each combination of tilth and consolidation were measured and effects on the numbers and biomass of slugs in the top 10 cm of soil and on damage to wheat seeds and seedlings were assessed. Eight species of slug were present, with three species predominating (Deroceras reticulatum, Arion distinctus and Arion subfuscus). Between 3% and 33% of seeds and seedlings were killed by slugs (recorded at Growth Stage 12). Contrary to expectation, most damage occurred on consolidated seed-beds of fine or medium tilth, least on loose seed-beds of the same texture; intermediate damage occurred on cloddy seed-beds, where consolidation had little effect. The level of damage occurring on different types of seed-bed was directly related to the biomass of slugs in the top 10 crn of soil, and was inversely related to depth of sowing and the percentage of fine soil in the seed-bed. These three factors together accounted for 94–97% of the variance in slug damage. Consolidation was associated with increased slug damage probably because of its effects on these three factors: slug biomass was greater and seed was at shallower depth in consolidated than loose seed-beds and consolidation, whether before or after drilling, failed to break down clods of soil into finer particles. This is the first experimental evidence in the field of the effects of seedbed conditions on slug numbers and damage to winter wheat and represents a significant step towards forecasting and avoiding slug damage in this crop.     

Prediction of take-all disease risk in field soils using a rapid and quantitative DNA soil assay

A rapid, routine DNA-based assay to quantify Gaeumannomyces graminis var. tritici (Ggt), the causal agent of take-all disease of cereals, has been developed and used for the prediction of take-all in a wide range of field soils. Based on the correlation of the DNA-based assay and a soil bioassay, the risk of disease development can be estimated. Ggt DNA levels of <30 pg, 30–50 pg and >50 pg in 0.1 g soil organic matter correspond to low, moderate and high levels of the disease, respectively. Limitations in the prediction of take-all, including sampling requirements to obtain representative soil samples from fields and increasing the sensitivity and the accuracy of the DNA assay, are described. The main advantage in using the DNA-based assay, in estimating the amount of Ggt inoculum in soil, is that the levels of Ggt in soil samples can be assessed rapidly and accurately. Farmers can now have soil samples assessed before sowing. The DNA result can be used to predict the potential yield loss and determine the most appropriate management options using decision support software that is currently available. This DNA technology is currently being used commercially to detect and predict take-all. This revised version was published online in June 2006 with corrections to the Cover Date.     

Responses of a sterile red fungus to soil types,wheat varieties and the presence of certain isolates ofStreptomyces

The biological activities of a sterile red fungus (SRF) capable of plant growth promotion and suppression of take-all disease were investigated in soils collected from Lancelin, Newdegate and Mt. Barker regions of Western Australia. Further, the effects of three wheat cultivars and the presence of two isolates ofStreptomyces on the biological activities of the SRF were tested using the Lancelin soil. The biological activities of the SRF were greatest in the Lancelin and Newdegate (wheat field) soils and with the wheat cultivar Gutha. In in vitro studies the soil streptomycetes tested showed either a significant increase in the exudate production by the SRF, which had antifungal and growth promoting properties, or an inhibition of growth of the fungus. Streptomycete A63 which stimulated the exudate production by the SRF in vitro, however, did not enhance disease protection in vivo. On the other hand, protection from root rot by the SRF in vivo was reduced in the presence of the streptomycete isolate Ax which is capable of inhibiting the growth of the SRF in vitro.     

Effects of waterlogging and drought on winter wheat and winter barley grown on a clay and a sandy loam soil

Summary The effects of winter waterlogging and a subsequent drought on the growth of winter barley and winter wheat have been examined. We used lysimeters containing soil monoliths with facilities to control the water table and a mobile shelter to control rainfall. Winter wheat was grown on a clay and on a sandy loam, but winter barley only on the clay soil. Lysimeters were either freely-drained during the winter or waterlogged with the water table 10 cm below the soil surface from 2 December until 31 March (that could occur by rainfall with a return period of 2 to 3 years). The lysimeters then were either irrigated so that the soil moisture deficit did not exceed 84 mm, or subjected to drought by limiting rainfall (equivalent to a 1 in 10 dry year in the driest area of England) so that the deficits reached maximum values of 150 mm in the clay and 159 mm in the sandy loam by harvest.Winter waterlogging restricted tillering and restricted the number of ears for all crops; grain yield of the winter barley was decreased by 219 g/m² (30%), and that of winter wheat by 170 g/m² (24%) and 153 g/m² (21% on the clay and sandy loam respectively.The drought treatment reduced the straw weight of winter barley by 75 g/m² (12%) but did not significantly depress the grain yield. For winter wheat on the clay, where the soil was freely-drained during the winter, drought depressed total shoot weight by 344 g/m² (17%) and grain weight by 137 g/m² (17%), but after winter waterlogging, drought did not further depress total or grain weight. In contrast, the winter wheat on the sandy loam was not significantly affected by drought.From these results, which are discussed in relation to other experiments in the United Kingdom, it seems that winter waterlogging is likely to cause more variation in the yield of winter barley and winter wheat than drought.     

保护性耕作和杂草管理对冬小麦农田土壤水分及有机碳的影响

在秸秆全量还田的试验田中(从2004年起),于2008-2009年及2009-2010年冬小麦生育期间,研究了不同耕作措施(旋耕、耙耕、免耕、深松和常规耕作)和杂草管理对冬小麦田土壤水分及有机碳的影响.结果表明:在未除草条件下,免耕、深松的杂草总密度显著提高;而在除草条件下,杂草密度显著下降.小麦从拔节期到灌浆期0～60 cm土层水分含量呈明显波动变化,田间保留一定量的杂草可增加不同耕作方式0～20 cm的土壤水分含量,表现出一定的土壤水分保持效应.保留杂草仅提高了拔节期0～20 cm土层的土壤有机碳含量;而在抽穗期和灌浆期,0～20、20～40和40～60 cm土层有机碳含量均低于去除杂草处理.去除杂草条件下,深松显著提高了冬小麦籽粒产量;保留杂草条件下,旋耕的籽粒产量最高,常规耕作产量最低.     

渭北旱塬保护性耕作对冬小麦-春玉米轮作田蓄水保墒效果和产量的影响

通过2007—2010年田间定位试验,研究了平衡施肥、常规施肥和无肥(或低肥)条件下,免耕、深松和翻耕处理对渭北旱塬冬小麦-春玉米轮作田土壤贮水量、作物产量、水分利用效率(WUE)和纯收益的影响.结果表明:休闲期免耕处理蓄水保墒效果最好,深松次之,翻耕最差;轮作田生育期内免耕和深松处理0~200 cm平均土壤贮水量分别较翻耕提高6.7%和1.9%;各施肥条件下作物产量、WUE和纯收益均以深松处理最高,且以平衡施肥深松处理表现最好,2007—2008年冬小麦、2009年春玉米、2009—2010年冬小麦产量分别为6909、9689、5589 kg.hm-2,WUE分别为18.5、25.2、23.0 kg.hm-2.mm-1,纯收益分别为5034、5045、7098元.hm-2.因此,平衡施肥与深松组合处理的蓄水保墒和增产增收效果最好,是渭北旱塬冬小麦-春玉米轮作田较适合的施肥耕作模式.     

不同玉米秸秆还田方式对冬小麦田土壤呼吸的影响

在连续耕作10年的保护性耕作农田进行定位试验,采用静态箱-TGC气体分析仪法田间原位观测玉米秸秆还田对冬小麦田土壤呼吸的影响.结果表明:麦田土壤呼吸与玉米秸秆留茬高度呈显著正相关关系,且在小麦整个生育期具有两个峰值;免耕不还田处理的土壤呼吸为免耕全量还田处理的72.5％,常规耕作不还田处理的土壤呼吸为常规耕作全量还田处理的76.5％.土壤呼吸与20 cm土层土壤温度和有机碳含量呈显著正相关,但与40 cm土层土壤有机碳含量相关性不显著;土壤水分与土壤呼吸的相关性显著.麦田秸秆全量还田处理的土壤日呼吸值呈单峰曲线,于18:00达到最高.20 cm土层土壤温度与土壤呼吸值的变化趋势一致.不同秸秆还田量处理中,留茬1 m的秸秆还田处理能显著减少土壤呼吸,是较合理的秸秆还田方式.     

Root growth,macro-nutrient uptake dynamics and soil fertility requirements of a high-yielding winter oilseed rape crop

Shoot growth, root growth and macro-nutrient uptake by a high-yielding (5t/ha grain) winter oilseed rape crop have been measured. Maximum rooting density in the top 20cm of soil was 9.4 cm cm⁻³ and roots reached a depth of at least 1.8 m. Maximum nutrient uptakes were 364 kg ha⁻¹ for N, 43 kg ha⁻¹ for P, 308 kg ha⁻¹ for K, 287 kg ha⁻¹ for Ca and 16 kg ha⁻¹ for Mg. A 30-day drought coincided with the flowering period and root and shoot growth, as well as nutrient uptake rates, were reduced. Nutrient concentrations in the soil solution necessary to sustain the nutrient fluxes into the root system by diffusive supply have been calculated. Peak values were in the range 10 μM for P to 87 μM for N, lower than the observed concentrations, and it was concluded that nutrient transport to roots was not a limitation to uptake by this rape crop.     

Field tests of bacteria and soil-applied fungicides as control agents for take-all in winter wheat

Putative biological and chemical treatments for controlling take-all were used in each of three consecutive years at two locations where winter wheat crops were grown in naturally-infested fields. The chemical treatments more often decreased take-all than the biological treatments, but no treatment consistently and significantly decreased take-all, nor did any cause a significant increase in yield. An isolate of Bacillus cereus var. mycoides and one of B. pumilis, applied as soil drenches in autumn or spring, or in the seed furrows, were usually ineffective. Of the few significant effects on disease, half were associated with increases and half with decreases, and most occurred in April and did not persist to late June. Two strains of Pseudomonas pluorescens applied to the seed were ineffective. The fungicide benomyl, applied as a drench in autumn and spring at 20 kg/ha was ineffective, while nuarimol, applied as a drench in autumn at 2 kg/ha was sometimes effective. Nuarimol incorporated into the seed bed at 2 kg/ha was the most effective treatment. In analyses using a functional relationship model for data from treated and untreated plots 12% of 176 data sets for biological treatments, 38% of 96 data sets for chemical treatments and 81% of 16 data sets for combined treatments showed increasing efficiency of the treatment with increasing disease intensity. These findings also demonstrate an additional advantage of the experimental design, namely that treatments are tested at different disease intensity levels within fields.