Red crabs in rainforest on Christmas Island,Indian Ocean: No effect on the soil seed bank

Red land crabs (Gecarcoidea natalis) are both abundant and widespread in intact rainforest on Christmas Island, Indian Ocean, occurring at densities of ~ 1 crab m^–2. We used an on-going exclusion experiment to test the hypothesis that through their activities as seed predators and soil disturbers, these omnivores are important determinants of the density and relative species abundance of seeds in the soil seed bank of undisturbed primary rainforest. After 6.5 y of continuous crab exclusion, there was no significant difference in the density of seeds in the top 3 cm of soil between the control (3671 ± 517 seeds/0.19 m²) and exclusion plots (3285 ± 801 seeds/0.19 m²), nor was there any significant treatment difference in relative species composition. There were also no significant treatment differences when Muntingia calabura, which accounted for 91.9% of all seeds in the seed bank, was excluded from the analyses. We attribute the lack of a significant impact of red crabs to their probable inability to handle the very small seeds which occurred in the seed bank, and the low level of soil disturbance at the study site. We conclude that the observed impact of red crabs on the abundance and diversity of successional species in natural light gaps on Christmas Island is due to their impact on germinating seedlings alone, rather than any additional impact on the soil seed bank.     

Spatial dynamics of supercolonies of the invasive yellow crazy ant, Anoplolepis gracilipes, on Christmas Island, Indian Ocean

Key to the management of invasive species is an understanding of the scope of an invasion, the rate of proliferation and the rate at which invaded habitats become degraded. This study examines the spatial dynamics of high-density supercolonies of the invasive yellow crazy ant, Anoplolepis gracilipes , on Christmas Island, Indian Ocean, and the associated impacts at their boundaries. Since the early 1990s, A. gracilipes supercolonies have occupied over 30% of the 10,000 ha of rainforest on Christmas Island. Thirty-four discrete high-density supercolonies formed between 1989 and 2003, ranging in size across nearly three orders of magnitude from 0.9 to 787 ha. Supercolonies boundaries are diffuse, and ants were observed in low densities in some cases up to 200 m from the main high-density supercolony. The 13 boundaries examined were all dynamic over a 10–20 observation month period: nine boundaries expanded, and the maximum rate of spread was 0.5 m day⁻¹. Across boundary transition zones, between high-density supercolonies and intact rainforest, yellow crazy ants reduced other ant species richness, occupied red crab burrows and killed resident red crabs, which was the trigger for 'invasional meltdown' on Christmas Island. The highly variable and unpredictable nature of A. gracilipes boundaries poses a challenge for incorporation into a predictive framework, as well as for their management.     

Pleistocene morphology and Holocene emergence of Christmas (Kiritimati) Island, Pacific Ocean

 Christmas (Kiritimati) Island is an unusually large coral atoll, of which a large proportion of the surface is presently subaerial. Extensive outcrops of in situ branching Acropora corals, together with Porites microatolls, Tridacna, and other shallow marine biota, indicate that the present low-lying area of interconnecting lakes in the island interior formed as a reticulate lagoon. Radiocarbon dating indicates that these lagoonal reefs flourished between 4500 and 1500 radiocarbon years BP, and surveying confirms that sea level was 0.5–1.0 m above present at that time, with subaerial exposure resulting from Late Holocene emergence. Boreholes undertaken for a water resources survey of the island penetrated near-surface Pleistocene limestones on the northern, southern, and eastern sides of the island. These are highly weathered and fractured, and although aragonitic clasts are preserved, U-series dating indicates a Middle Pleistocene or older age. At one location flanking the Bay of Wrecks, an outcrop of limestone, with an erosional notch, 1–2 m above present sea level, yielded a U-series age of 130 ka, and is interpreted as Last Interglacial in age. In contrast to previous interpretations which have suggested that Christmas Island comprised an atoll superstructure that is entirely Holocene, or the layer-cake interpretation appropriate for many mid-ocean atolls, Christmas Island appears to have had a form similar to its present in the Middle Pleistocene or earlier. It has undergone karstification during lowstands. Interglacials, particularly the Last Interglacial and the Holocene, appear to have resulted in only a minor veneer of coral over older limestone surfaces. Christmas Island is considered characteristic of an atoll that has not experienced significant subsidence through the Late Quaternary. Accepted: 15 May 1998     

Establishing a perimeter position: speciation around the Indian Ocean Basin

Historical biological interactions among peripheral landmasses on the periphery of the Indian Ocean Basin (IOB) are generally poorly understood. While interactions based on early Gondwanan vicariance have been used to explain present day lineage distributions, several recent studies have instead inferred dispersal across the IOB. This inference is often advanced because lineages under study have species inhabiting IOB islands. Here we examine the roles of continental vicariance vs. trans-IOB dispersal in the distribution of an avian genus found around the perimeter of the IOB. A molecular phylogeny does reveal evidence of a relationship that would require the inference of trans-IOB dispersal between eastern Africa and Sri Lanka. However, molecular clock data, ancestral area analyses and paleoclimatic reconstructions suggest that vicariance related to tropical forest expansion and retraction is more likely to have facilitated African-Asian interchange, with an initial colonization of Africa from Asia quickly followed by a recolonization of Asia. Subsequent dispersal from Asia to Sri Lanka and islands east of the Sunda Shelf are inferred; these latter islands were colonized in a stepping-stone fashion that culminated in colonization of the Sunda Shelf, and a recolonization of mainland Asia. We propose that circum-IOB distributions, which post-date early Gondwanan breakup, are most likely the result of continent-based vicariant events, particularly those events related to large-scale habitat alterations, and not trans-IOB dispersals.     

The pteridophytes of Mauritius (Indian Ocean): ecology and distribution

A survey of the pteridophytes of Mauritius is presented, including a summary of their habitats, ecology, and phytogeographical affinities. Of the 186 infrageneric taxa recorded from the island, 8 are adventive or naturalized, and 27 are presumed rare or extinct. Major ecological groupings are presented and species are listed for both indigenous and secondary plant communities.     

Monognathus berteli sp. nov. from the Indian Ocean (Pisces,Monognathidae)

A new deepsea monognathid species,Monognathus berteli, is described based on one specimen collected pelagically in the northwestern Indian Ocean at 1440–1018 meters of depth. LikeM. taningi andM. bertini, it belongs to the short-skulled species-group and has very long pectoral fins, but differs from these species by several meristic characters. The described specimen has a very long caudal filament (53% SL) which is not known from otherMonognathus. However, the fragile filament is not used as a diagnostic character since it could easily be broken.     

Distinction between Mulloidichthys flavolineatus juveniles from Reunion Island and Mauritius Island (south-west Indian Ocean) based on otolith morphometrics

Sagittal otoliths of the yellowstripe goatfish Mulloidichthys flavolineatus were analysed in order to compare Reunion Island fish stocks with those of Mauritius (south-west Indian Ocean). Conventional otolith morphometric variables (area, perimeter, length and width), shape indices (form factor, roundness, circularity, rectangularity, ellipticity and eccentricity) and Fourier shape analysis were compared between three sites; two in Reunion Island and one in Mauritius. Regional and site-specific differences were found for all the conventional otolith morphometric features. Regarding the shape indices, the differences between sites were best described by form factor, roundness, circularity and rectangularity. A classification by canonical discriminant analysis indicated significant differences between the three sampling sites. The combined use of morphometric variables (size and shape) and external outlines (shape analysis through Fourier series) showed the importance of otolith shape for intraspecific discrimination.     

Deep-sea nematodes from the Indian Ocean: new and known species of the family Comesomatidae

Twelve new and known species of the genera Sabatieria,Cervonema, Paramesonchium, Hopperia and Dorylaimopsis and one new genus, Kenyanema aredescribed from the Indian Ocean and S. pisinna Vitiello,1970 from the Mediterranean Sea. Sabatieria lucia sp. n.is characterised by short but distinct inner and setiformouter labial sensilla and long (4–5 µm or 30–33% hd)cephalic sensilla; S. conicauda Vitiello, 1970, ischaracterised by tiny inner and outer labial sensilla andsetiform cephalic ones and short and thick cylindrical tail;Sabatieria pisinna is characterised by short innerand outer labial sensilla, setiform (3µm long) cephalicsensilla, multispiral amphids with 3.25–3.5 turns and a tailwhich is conical in the anterior 2/3 and posterior 1/3cylindrical; Cervonema tenuicauda Schuurmans Stekhoven,1950, is characterised by anterior sensilla in twocircles which are equal in length (3µm long), multispiralamphids with 3–4 turns and located at 1.5 times hd from theanterior end, simple spicules one abd long and 6–7 fineprecloacal supplements; Cervonema minutus sp. n.characterised by an extremely attenuated anterior end,spiral amphids with 4–5 turns (80–90% cbd) and short,simple spicules (0.8 abd long); Cervonema gourbaulti sp.n. characterised by long (4–5 µm) labialand cephalic sensilla, spiral amphids with 5–6 turns(73–88% cbd) and an elongate crenate terminal pharyngealbulb; Paramesonchium mombasi sp. n. characterised bylong labial (5 µm) and cephalic (21 µm) sensilla thatare close together and wide amphids (80–90% cbd); Kenyanema monorchis gen. et sp. n. characterised bya head region narrower than the rest of the body, fourcephalic sensilla (3 µm long) and spiral amphids with1.5–2 turns; Hopperia indiana sp. n. characterised byshort conical anterior sensilla, arcuatespicules that have a velum and a gubernaculum with a longand sharp pointed apophysis; Dorylaimopsis coomansi sp.n. characterised by long (8–10µm) cephalic setae,cuticular punctation with lateral differention of irregularlyarranged dots at the pharyngeal region and 1–3longitudinal rows of dots posterior of the pharynx; spiculeswith a unique shape; Dorylaimopsis gerardi sp. n.characterised by short setiform labial and long (6–7 µm)cephalic sensilla, punctated cuticle with lateraldifferentiation of irregularly arranged dots at firstthen three or four irregularly arranged longitudinal rows atthe pharyngeal and tail regions and two regularly arrangedlongitudinal rows of dots on the rest of the body, aconico-cylindrical tail with a distinctly swollen tip;Dorylaimopsis variabilis sp. n. is characterised byshort labial and setiform cephalic sensilla (33–58% hd),multispiral amphids with three turns, cuticular punctationswith lateral differentiation of three longitudinalrows at the pharyngeal and tail regions and two longitudinalrows on the rest of the body, spicules that are thin andslightly arcuate. The position of S. pisinna accordingto the grouping of Platt, 1985 of Sabatieriaspp. is also discussed. Kenyanema monorchis representsthe first monorchic species in the family.     

Sedimentation on Rasdhoo and Ari Atolls, Maldives, Indian Ocean

A first systematic study of composition, texture, and distribution of modern sediments in two Maldivian atolls reveals the predominance of skeletal carbonates. Fragments of corals, calcareous algae, mollusks, benthic foraminifera, and echinoderms are identified in the grain-size fraction >125 μm. Non-skeletal grains such as cemented fecal pellets and aggregate grains only occur in small percentages. Fragments of skeletal grains, aragonite needles, and nanograins (<1 μm) are found in the grain-size fraction <125 μm. Needles and nanograins are interpreted to be largely of skeletal origin. Five sedimentary facies are distinguished (1–5), for which the Dunham-classification is applied. Fore reef, reef, back reef, as well as lagoonal patch reef and faro areas in both atolls are characterized by the occurrence of coral grainstones (1), which also contain fragments of red coralline algae, the codiacean alga Halimeda, and mollusks. On reef islands, coral-rich sediment is cemented to form intertidal beachrock and supratidal cayrock. Skeletal grains in atoll-interior lagoons are mainly mollusks and foraminifera. The lagoon of Rasdhoo Atoll is covered in the west by mudstones (2), in the center by mollusk packstones (3) and mollusk wackestones (4), and by hard bottoms with corals in the east adjacent to channels through the atoll reef margin. The interior lagoon of Ari Atoll contains mollusk wackestones (4) in the center and mollusk-foraminifer packstones (5). Marginal lagoon areas are characterized by hard bottoms with corals. Facies distribution appears to be an expression of depositional energy, which decreases from the atoll margin towards the center in Ari Atoll, and towards the west in Rasdhoo Atoll. Predominant sediment mineralogies include aragonite and high-magnesium calcite. Mean aragonite content decreases from 90% in coral grainstone to 70–80% in mollusk packstone, mollusk wackestone, and mudstone, and to 50% in mollusk-foraminifer packstone. Stable isotopes of oxygen and carbon in bulk samples range from −3 to −1.5 (δ¹⁸O) and from +0.4 to +3.2 (δ¹³C). It is not possible to delineate facies based on O- and C-isotopes.     

Abundance and site fidelity of bottlenose dolphins off a remote oceanic island (Reunion Island,southwest Indian Ocean)

This study represents the first comprehensive assessment of the population dynamics and residency of common bottlenose dolphin around Reunion Island (southwest Indian Ocean). Understanding dynamics and movement patterns of this local population is essential to guide effective conservation efforts, notably in a context of growing dolphin-watching activities. Dedicated surveys based on photo-identification methods were conducted over 6 years (2010–2015). The species was present year-round, in groups of 25 individuals on average (1–150). Jolly-Seber mark-recapture models resulted in a population estimate of 254 individuals (95% CI = 191–337) and an apparent annual survival rate of 0.83. The population was almost equally split into three residency patterns: residents (33.1%), long-term visitors (32.6%), and short-term visitors (34.3%, including transients, i.e., individuals only seen once [14.9%]), suggesting that the majority of the population showed a moderate-to-high level of residency in the study area. Individuals from the three residency patterns associated randomly, mixing together and forming a single community. Models based on the lagged identification rate indicated emigration and reimmigration to the survey area, with some individuals occupying the study area for about 2 years (832 days), and remaining outside for an average of 276 days, probably exhibiting larger home ranges and extensive movement behavior.     

Biodiversity patterns in Indian Ocean corals, and effects of taxonomic error in data

Corals from 26 sites in the Indian Ocean, from numerous taxonomic sources, are analysed for distribution patterns after applying a consistent synonymy. The data set contains double the amount of distribution information used previously. Cluster analysis shows several contiguous regional groupings within this ocean, and no geographically dispersed groupings exist. Between-site species similarity correlates negatively with distance between sites. Coral species diversity and genus diversity plotted with latitude and longitude confirm that a band of high diversity stretches across the entire Indian Ocean, but that in this Ocean, unlike the Pacific and greater Caribbean area, there is no clear gradient with latitude at least up to the latitudinal limits of coral growth. About half the species are widespread throughout the Indian Ocean. Species frequency/distribution curves and cumulative frequency curves show that 150 species occur at only 2–4 sites. Multi-dimensional scaling (MDS) analysis using only these species confirms that they are important in forming sub-regional groupings which are superimposed on a general Indian Ocean homogeneity.The perennial problem of error in taxonomic data sets is examined. Increasing taxonomic error is introduced into the data using random methods. It is found that about 25% more error can be added to this data set before the relationship between similarity coefficient and geographical distance between pairs of sites is lost. Measures extracted from the clustering procedure using the original data and the data sets with added taxonomic error, show a sharp loss in cluster formation after addition of about 10 or 20% more error.     

食果动物传播种子的跟踪技术

研究食果动物传播种子的主要问题之一是难以跟踪种子命运和估计种子域。到目前为止,已有不少方法用于研究食果动物与种子扩散和种子命运的关系,如直接观察法、同位素标记法、金属标记法、磁铁标记法、荧光染料法、微粒体标记法、线标法和遗传技术等。近年来,一些研究将数字编号用于种子标记,并已成为发展的主流。本文综述了以往跟踪种子命运和估计种子域的一些重要方法,并讨论了它们各自的优缺点及其应用。     

Digestive enzymes of two brachyuran and two anomuran land crabs from Christmas Island,Indian Ocean

The digestive ability of four sympatric land crabs species (the gecarcinids, Gecarcoidea natalis and Discoplax celeste and the anomurans, Birgus latro and Coenobita perlatus) was examined by determining the activity of their digestive enzymes. The gecarcinids are detritivores that consume mainly leaf litter; the robber crab, B. latro, is an omnivore that preferentially consumes items high in lipid, carbohydrate and/or protein; C. perlatus is also an omnivore/detritivore. All species possess protease, lipase and amylase activity for hydrolysing ubiquitous protein, lipid and storage polysaccharides (glycogen and starch). Similarly all species possess enzymes such as N-acetyl-β-d-glucosaminidase, the cellulases, endo-β-1,4-glucanase and β-glucohydrolase and hemicellulases, lichenase and laminarinase for the respective hydrolysis of structural substrates chitin, cellulose and hemicelluloses, lichenan and laminarin. Except for the enzyme activities of C. perlatus, enzyme activity could not be correlated to dietary preference. Perhaps others factors such as olfactory and locomotor ability and metabolic status may determine the observed dietary preferences. The digestive fluid of C. perlatus possessed higher endo-β-1,4-glucanase, lichenase and laminarinase activities compared to that of the other species. Thus, C. perlatus may be efficient at digestion of cellulose and hemicellulose within plant material. Zymography indicated that the majority of protease, lipase, phosphatase, amylase, endo-β-1,4-glucanase, β-glucohydrolase and N-acetyl-β-d-glucosaminidase isozymes were common to all species, and hence were inherited from a common aquatic ancestor. Differences were observed for the phosphatase, lipase and endo-β-1,4-glucanase isozymes. These differences are discussed in relation to phylogeny and possible evolution to cope with the adoption of a terrestrial diet.     

西南印度洋中脊深海沉积物砷抗性菌的富集分离与多样性分析

[目的]为了筛选深海砷抗性菌,了解印度洋中脊深海沉积物砷抗性菌的多样性情况.[方法]通过砷富集培养,筛选出砷抗性菌;通过变性梯度凝胶电泳(DGGE)分析与构建16S rDNA克隆文库法两种手段分析了富集物中砷抗性菌的多样性.利用兼并引物PCR,从抗性菌株中克隆与砷抗性相关的基因.[结果]共筛选到8株砷抗性菌,分别属于y-proteobacteria的5个不同的属.其中,菌株AS-I1-3的抗性最高,可以在26×10-3 mol/L三价砷存在的情况下生长,该菌株的16S rDNA序列与菌株Pseudoalteromonas tetraodoni IAM同源性最高(100%).DGGE分析显示,该菌是富集物中的最优势菌,其次是盐单胞菌(Halomonas)和海杆菌(Marinobacter).16S rDNA克隆文库分析结果进一步证明,与菌株AS-I1-3序列相同的克隆子占整个克隆文库的72.5%;而与菌株AS-I1-5(Halomonas meridiana,100%)和菌株Mn-I1-6(Marinobacter vinifirmus,99%)序相同的克隆子分别占10%和7.5%.然而,利用兼并引物PCR,仅能从2株非优势菌中克隆到了与砷抗性相关的基因,表明菌群中的优势抗性菌可能有其他的抗性机制.[结论]在深海环境中存在着多种砷抗性菌,其中Pseudoalteromonas属的菌株是该富集条件下的砷抗性优势菌.这些砷抗性菌在大洋环境砷元素的生物地球化学循环中的作用有待进一步研究.     

A new species, Parupeneus procerigena, from the Saya de Malha Bank in the western Indian Ocean (Perciformes: Mullidae)

A new mullid fish, Parupeneus procerigena, is described on the basis of 13 specimens (118.9–198.4 mm SL) from depths of 92–148 m off the Saya de Malha Bank in the western Indian Ocean. This species resembles P. chrysopleuron and P. heptacanthus in color pattern without black stripes or spots, but it differs from them in having more gill rakers, two scales in lachrymal region, deeper body, deeper cheek, and longer distance between nostrils. Received: April 4, 2000 / Revised: July 27, 2000 / Accepted: August 27, 2000     

Abundance of thraustochytrids and bacteria in the equatorial Indian Ocean, in relation to transparent exopolymeric particles (TEPs)

Thraustochytrid protists are often abundant in coastal waters. However, their population dynamics and substrate preferences in the oceanic water column are poorly understood. We studied the abundance and distribution of thraustochytrids, bacteria and TEPs in the equatorial Indian Ocean waters during September 2003, October 2004 and September 2006. Thraustochytrids and bacteria were abundant, suggesting high biological productivity of the region. Thraustochytrids were positively related to bacteria during October 2004 but not at other times, suggesting overlapping or varying substrate preferences at different times. Thraustochytrid and bacteria were positively related to TEPs only in a few stations during October 2004, but were mostly positively related to TEPs generated from in situ water in a roller table experiment. TEPs from natural samples during October 2004 had a much greater affinity to the lectin Concanavalin A than to Limulin compared with those in September 2006 and from the roller tank experiments. The chemical composition of TEPs might explain their relationship with thraustochytrids. Thraustochytrids averaged a higher biomass than bacteria in two of the three cruises, but were less frequent and more patchily distributed compared with bacteria.     

Immigration, species radiation and extinction in a highly diverse songbird lineage: white-eyes on Indian Ocean islands

Molecular phylogenetic hypotheses of species-rich lineages in regions where geological history can be reliably inferred may provide insights into the scale of processes driving diversification. Here we sample all extant or recently extinct white-eye (Zosterops) taxa of the southwest Indian Ocean, combined with samples from all principal continental lineages. Results support a high dispersal capability, with at least two independent continental sources for white-eyes of the region. An early (within 1.8 million years ago) expansion into the Indian Ocean may have originated either from Asia or Africa; the three resulting lineages show a disparate distribution consistent with considerable extinction following their arrival. Africa is supported as the origin of a later expansion into the region (within 1.2 million years ago). On two islands, a pair of Zosterops species derived from independent immigrations into the Indian Ocean co-occur or may have formerly co-occurred, providing strong support for their origin by double-island colonization rather than within-island (sympatric or microallopatric) speciation. On Mauritius and La Réunion, phylogenetic placement of sympatric white-eyes allow us to rule out a scenario in which independent within-island speciation occurred on both islands; one of the species pairs must have arisen by double colonization, while the other pair is likely to have arisen by the same mechanism. Long-distance immigration therefore appears to be responsible for much of the region's white-eye diversity. Independent immigrations into the region have resulted in lineages with mutually exclusive distributions and it seems likely that competition with congeneric species, rather than arrival frequency, may limit present-day diversity.     

Pleistocene marine depositionalenvironments from Mauritius island,Indian Ocean

The Pleistocene elevated marine carbonate complexes on Mauritius island correspond to three types of depositional zones: (1) reef-crest zone, (2) backreef zone, (3) littoral zone.On reef crests, the primary frame-builders are scleractinian corals (Acroporidae, Faviidae, Poritidae) and crustose coralline algae. The secondary builders are encrusting Foraminifers (Homotrematidae) chiefly, Molluscs (Vermetidae), Bryozoans (Cheilostomata) and Serpulids. Associated internal sediments are coarse to fine sand-sized grainstones or packstones and wakestones. In decreasing order of abundance, skeletal elements include fragments of corals, branched and crustose red algae, Pelecypods, Gastropods, benthonic Foraminifera (Amphisteginidae, Peneroplidae, Calcarinidae, Nummulitidae, Alveolinidae and Homotrematidae), Echinoderms and Alcyonarians; the most abundant mud-sized grains are identified as tunicate spicules. Primary marine cements are needle, palisade, micrite and pelletal ones.The backreef zone is characterized by coarse tomedium grainstones, packstones and wakestones. In addition to pellets the most common components are skeletal in nature; they broadly show the same mode of occurrence as the reef-crest unit. Primary cements locally occur in packed fibrous or micrite form.In littoral areas, well-sorted grainstones to poorlysorted mudstones can be described. The distribution of the various categories of biogenic particles is dependent upon the extent of reef tracts; ancient beaches from narrow reefs are characterized by coralgal facies while consolidated muddy banks in large complexes display high amount of molluscan detritus. Primary cementation appears mainly to be the result of the precipitation of fibrous or micrite calcite.The morphology, biological associations andsediments of these Pleistocene limestones are homologous with those of the adjacent modern environments.