研究报告: 基于核酸适配体的胶体金比色法检测鳗弧菌

目的 鳗弧菌（Vibrio anguillarum）可引起鲑鱼、鳗鲡、鲈鱼和牙鲆等多种水产养殖动物的疾病，是水产养殖中的一种重要病原菌，对其进行快速检测是确保水产养殖安全和食品安全所必需的。方法 本文利用鳗弧菌与其核酸适配体之间较强的亲和力，通过鳗弧菌夺取胶体金颗粒表面的核酸适配体，使胶体金溶液的吸光度发生变化，从而建立一种可定量检测鳗弧菌的方法。结果 该方法对鳗弧菌的吸光度值显著高于对溶藻弧菌、铜绿假单胞菌、变形假单胞菌、嗜水气单胞菌和迟钝爱德华氏菌等非目标菌的吸光度值（P<0.01），并在1~10⁵ CFU/ml的检测范围内呈现较好的线性关系。用该方法对不同盐度和鱼体组织样品进行加标回收检测，结果显示回收率和相对标准偏差等指标都符合相应检测标准。结论 该检测方法对鳗弧菌有较好的特异性，可用于水产品或食品中鳗弧菌的定量检测。     

通过易错PCR提高鼠伤寒沙门氏菌丙氨酸消旋酶催化活性

[目的] 通过易错PCR技术提高鼠伤寒沙门氏菌中丙氨酸消旋酶的催化活性。[方法] 利用易错PCR技术构建丙氨酸消旋酶基因alr_St的突变体文库,采用缺陷菌株UT5028筛选突变体基因,以D-氨基酸氧化酶偶联法检测各突变蛋白的活性,通过凝胶过滤层析法分析酶蛋白寡聚化状态,并采用HPLC检测酶蛋白的动力学参数。[结果] 经过易错PCR及定点突变技术最终获得了3个催化活性有所提高的突变体A3V、Y343H和A3VY343H,酶学特性分析发现,与野生型蛋白StAlr相比,突变体Y343H仅对底物L/D-丝氨酸的催化效率略有提高,k_cat/K_m值分别是StAlr的2.01和3.68倍;而突变体A3V则对底物L/D-丙氨酸或L/D-丝氨酸的K_m、k_cat和k_cat/K_m值均有较大幅度的改变,其k_cat/K_m值分别是StAlr的105.51、97.36、4.63和10.73倍。凝胶过滤层析结果显示,突变体A3V在蛋白含量极低时就呈现出单体和二聚体共存状态,且随着蛋白含量的增加,其向二聚体状态迁移的速率最为明显。[结论] 丙氨酸消旋酶StAlr的第3位点是影响其催化活性和低聚合状态的关键位点。     

PRGDWR-尿激酶原双功能嵌合分子的性质研究

为赋予单链尿激酶型纤溶酶原激活剂(single chain urokinase-type plasminogen activator, scu-PA, 尿激酶原)以抗血小板聚集的功能,在scu-PA的kringle区118位Gly与119位Leu之间插入PRGDWR序列（insert mutant B,InB）.利用甲醇酵母（Pichia pastoris）进行分泌表达,经金属离子螯合亲和层析与S强阳离子交换层析,得到纯蛋白.实验测定InB对人工合成底物S-2444的酰胺解活性为5 900 IU/mg,动力学常数为：K_m,S-2444^InB=56.8 μmol·L^-1,k_cat,S-2444^InB=0.33 s^-1;水解天然底物plasminogen的动力学常数为：K_m,plg^InB=0.397 μmol·L^-1,k_cat,plg^InB=0.0164 s^-1.InB激活plasminogen的反应在有fibrin存在条件下InB的活性为无fibrin条件下的46.3％.该突变体在体外激活plasminogen的活性与同一系统表达的野生型scu-PA基本相同.该突变体表现出较强的抗血小板聚集活性,IC₅₀＝12.7 μmol·L^-1,而野生型scu-PA无此功能.实验表明scu-PA的K区插入突变体InB是一种极具潜力的双功能溶栓分子.     

尖吻蝮蛇毒碱性磷脂酶A2的表达及其生化特征

将尖吻蝮蛇毒碱性磷脂酶A₂（A.aBPLA₂）基因克隆至温敏表达载体pBLMVL2,在大肠杆菌RR1中成功诱导表达.表达产物A.aBPLA₂约占细菌蛋白质总量的20％,并以包涵体的形式存在.纯化包涵体后,将产物变性、复性,然后用FPLC Superose^TM12纯化,产物经过SDS-聚丙烯酰胺凝胶电泳检测只有单一条带.对纯化后的表达A.aBPLA₂进行了酶活性、抑制血小板聚集活性和溶血活性的测定.结果显示,表达A.aBPLA₂的酶活性与变性后复性江浙蝮蛇酸性磷脂酶A₂酶活性相近,具有类似变性后复性江浙蝮蛇碱性磷脂酶A₂的溶血活性,没有抑制血小板聚集活性.最后对磷脂酶A₂的结构与这些活性的关系进行了讨论.     

水稻高温敏感侧根缺失突变体k209的鉴定和基因定位

该研究以甲基磺酸乙酯（EMS）诱变得到的1个水稻高温敏感侧根缺失突变体k209及其野生型Kasalath为材料,在常温（白天32 ℃/夜晚22 ℃）和高温（34 ℃恒温）培养条件下,对其7 d龄幼苗进行表型比较鉴定,并采用亚甲基蓝染色观察侧根原基形成;以突变体k209为母本,分别与野生型Kasalath和粳稻品种日本晴杂交构建2个F₂群体进行遗传分析和基因定位,确定基因所属染色体以及在该染色体上的位置。结果表明：（1）在正常温度培养下,突变体k209的7 d龄幼苗株高、主根长和不定根长均与野生型Kasalath相似,但侧根长度变短,数量也减少;在高温条件下,k209幼苗株高变矮,主根和不定根的长度变短,表现出无侧根表型。（2）亚甲基蓝染色发现,野生型和k209幼苗主根在正常温度和高温条件下均可以观察到侧根原基,但在高温下k209的侧根原基数目明显少于Kasalath,约为Kasalath的58.03%,且不能突破表皮长出侧根。（3）遗传分析表明,k209的突变表型受隐性单基因控制,利用图位克隆技术将K209基因定位于4号染色体的InDel标记7522K和11524K之间,物理距离约4 002 kb。该研究结果为K209基因的克隆和解析水稻侧根的发生机制奠定了基础。     

怀槐细胞悬浮培养的结构化动力学模型

为探明怀槐细胞生长、异黄酮染料木素合成与底物消耗间的关系,建立了怀槐细胞悬浮培养的结构化动力学模型。模型预测分析了胞内外的蔗糖代谢、胞内结构组分变化、胞内中间组分的变化、细胞呼吸损失以及胞内外异黄酮染料木素的合成情况。模型各参数灵敏度的分析表明kM_b1、k_b2 和k_p是最为灵敏的参数,其调节10%时,目标函数变化的最大比例分别达12.8%、4.61%和2.54%,其它参数对目标函数变化的影响均小于0.5%。该模型预测值与实验值具有较好的吻合性。     

纤维蛋白对尿激酶原激活纤溶酶原反应动力学的影响

反应体系中存在的纤维蛋白（fibrin）对尿激酶（UK）、scu-PA以及组织型纤溶酶原激活剂（t-PA）激活纤溶酶原（plasminogen）的反应有不同的作用：UK、t-PA激活plasminogen的反应可被反应体系中存在的fibrin所加强;fibrin对scu-PA激活plasminogen反应的动力学常数无明显影响;但对小分子质量scu-PA与单链抗体的嵌合分子激活plasminogen的反应起明显的抑制作用.为确定反应体系中存在的fibrin对scu-PA的K区插入突变体-InB激活plasminogen反应的影响,测定了在反应体系中存在fibrin的情况下的InB激活plasminogen反应的K_m^fibrin以及k_cat^fibrin.K_m^fibrin＝4.2 μmol·L^-1,远远大于无fibrin时的K_m＝0.379 μmol·L^-1,说明有fibrin存在时突变体InB与天然底物plasminogen的亲和性降低了.k_cat^fibrin＝0.107 s^-1,也远远大于无fibrin时k_cat＝0.0165 s^-1,说明有fibrin存在时突变体InB对plasminogen的反应活性增强了.原因可能是：与fibrin结合的plasminogen的构象发生了有利于被纤溶酶原激活剂水解的变化.     

Microcalorimetric studies of the action of Na2SeO3 on the growth of Halobacterium halobium R1

The effect of Na₂SeO₃ on the growth of Halobacterium halobium R1 was investigated by means of microcalorimetry at 37°C. The biological response to toxicants is observed as the inhibition of the rate constant of growth of living cells. A low concentration of Na₂SeO₃ stimulated the growth of H. halobium R1, and a high concentration of Na₂SeO₃ inhibited the growth of H. halobium R1. Toxicity may be expressed as the half-inhibition concentration (IC₅₀). The rate constants of growth (k) and the concentrations of Na₂SeO₃ (c) shows a linear relationship: k=1.790 × 10⁻⁶ − 2.27 × 10⁻³ c. The value of IC₅₀ obtained from the accompanying figure of I-c is 679 μg/mL.     

云冷杉红松林掘根倒木及其微立地对凋落叶分解速率及养分释放的影响

采用凋落物分解袋埋藏法,将采集的红松（Pinus koraiensis）、紫椴（Tilia amurensis）和色木槭（Acer mono）凋落叶按自然比例混合装入袋中,于2019年7月将其埋入云冷杉红松林中不同腐烂等级（Ⅱ、Ⅲ、Ⅳ级）的掘根倒木（UT）及其形成的坑底（PB）与丘面（MF）以及对照（包括林隙（FG）和林分（IS））等11种微立地下。8-10月每月从每种微立地取回3袋,处理后测定凋落叶的质量、碳、氮、磷含量。采用相关分析和方差分析的统计分析方法,探究不同微立地下凋落叶的质量、分解速率与养分元素之间的相关性和差异显著性。结果表明：（1）微立地和分解时间对凋落叶质量具有极显著影响（P<0.01）。凋落叶分解90天后,各微立地的凋落叶质量残留率排列为：PB （85.64%） > MF （83.09%） > FG （81.33%） > IS （80.93%） > UT （80.27%）;（2）各微立地的凋落叶分解速率排列为：k_IS=k_UT>k_FG>k_MF>k_PB;Olson指数模型能够较好的模拟各微立地的凋落叶分解动态;年分解速率k为0.61-1.42,分解50%和95%所需时间分别为0.49-1.14 a和2.10-4.92 a。（3）各微立地的凋落叶C残留率总体呈下降趋势,表现为释放模式;UT和MF微立地的N、P残留率持续下降,表现为释放;PB微立地的N、P变化模式分别为释放-富集-释放、富集-释放模式,释放均大于富集,最终表现为释放模式。微立地对凋落叶P释放具有极显著影响（P<0.01）,对N释放具有显著影响（P<0.05）;微立地与掘根倒木腐烂等级的交互作用对C、N释放均具有极显著的影响（P<0.01）。（4）凋落叶质量残留率与P的残留率在所有微立地中均存在显著或极显著正相关关系,与N的残留率仅在Ⅱ级UT、PB微立地、Ⅲ级UT微立地、Ⅳ级UT、PB和MF微立地以及FG对照中呈显著或极显著的正相关关系,与C的残留率仅在Ⅱ级UT、PB微立地、Ⅳ级PB、MF微立地中存在极显著或显著正相关关系,与C/N在Ⅱ级UT微立地、Ⅲ级UT、MF微立地和FG对照中呈显著或极显著负相关关系。可见,与不同腐烂等级的掘根倒木相比,掘根倒木形成的微立地环境对凋落叶分解和养分释放的影响较大。     

DNA末端定量及其应用的研究

为定量DNA断裂末端评价DNA的降解程度,以饱和标记(TdT)法定量DNA末端最大标记量(L_max);并用流式细胞分析(FCA)、原位DNA末端标记(TUNEL)和琼脂糖电泳检测或标记DNA降解片段.结果发现: a.TdT法最低检测限5 ng DNA,线性范围为5～5 000 ng,较检测DNA降解片段的琼脂糖电泳敏感200倍以上;b.地塞米松(DEX)诱导淋巴瘤(Raji)细胞凋亡产生的L_max呈DEX剂量与诱导时间依赖性增加;c.自发性高血压大鼠(SHR)心肌的L_max呈年龄依赖性增加并与正常对照鼠(WKY)相比差异非常显著(P＜0.01);d.TdT法定量L_max与FCA、TUNEL或电泳分析的相关性良好(r＞0.98).TdT法定量L_max敏感、特异、准确,可应用于分子生物学、细胞生物学,尤其是细胞凋亡动力学DNA降解评价的定量研究.     

一种新型蚯蚓纤溶酶的部分性质研究

为获得一种高效的溶栓药物。从赤子爱胜蚓(Eiseniafoelida)中分离纯化得到了一种纤溶酶组分。用Lowry法测定蛋白质浓度,SDSPAGE鉴定纯度为98%,表观相对分子质量(Mr)为14850,纤维蛋白平板法测定其总纤溶活性为65.51×103mm2/mg,直接纤溶活性为15.61×103mm2/mg,间接纤溶活性为26.34×103mm2/mg。水解BAEE的米氏常数(Km)为1.82×105mol/L。水解ChromozymPL的米氏常数(Km)3.98×105mol/L,水解ChromozymtPA的米氏常数(Km)5.55×105mol/L活性,N端氨基酸序列测定的结果为VIGGTNAIPGEFPYQ。结果表明该纤溶酶分子量较小,间接活性较高,适宜作为一种新型的溶栓药物。     

Production of Bacillus subtilis-fermented red alga Porphyra dentata suspension with fibrinolytic and immune-enhancing activities

The fermented marine alga Porphyra dentata suspension was tested for its fibrinolytic and immune-enhancing activities. An isolated Bacillus subtilis N2 strain was selected for its fibrinolytic activity on fibrin plates. After investigating the effects of biomass amounts of P. dentata powder in water, various additives including sugars, nitrogen-containing substances, lipids and minerals, and cultural conditions of temperature and agitation in flask, the highest fibrinolytic activity in the cultural filtrate was obtained by cultivating N2 strain in 3% (w/v) P. dentata powder suspension containing 1% peanut oil at 37?°C, 150?rpm for 48?h. A fermentor system was further established using the same medium with controlled pH value of 7.0 at 37?°C, 150?rpm, 2.0 vvm for 48?h for the best fibrinolytic activity. The fermented product also showed its immune-enhancing activity by increasing cell proliferation and stimulating the secretion of IL-1β, IL-6, and TNF-α in J774.1 cells.     

Purification and partial characterization of a fibrinolytic enzyme from the fruiting body of the medicinal and edible mushroom Pleurotus ferulae

A fibrinolytic metalloprotease with in vitro fibrinolytic effects was purified from the edible mushroom Pleurotus ferulae using several chromatography steps including anion and ion exchange, gel filtration, and fast protein liquid chromatography columns. The molecular mass of the enzyme was estimated to be 20.0?kDa, as determined using sodium dodecyl sulfate-polyacrylamide gel electrophoresis and fibrin zymography. The protease was active at 50°C, and pH 4.0, 5.0, and 8.0. The fibrinolytic activity of the enzyme was inhibited by ethyleneglycol-bis-(2-aminoethyl)-N,N,N′,N′ tetraacetic acid and strongly inhibited by two metal ions, Cu and Mg. In vitro assays evaluating fibrinolytic activity on a fibrin plate, fibrin turbidity, and thrombolytic activity on fibrin clots using human fibrinogen and human thrombin revealed that the enzyme could hydrolyze fibrin polymers directly and inhibit the formation of fibrin clots. In activated partial thromboplastin time (APTT) and prothrombin time assays, the enzyme strongly prolonged the APTT, which detects an activity of intrinsic and common pathways. The enzyme showed strong in vivo protective effect against mortality/paralysis from epinephrine plus collagen-induced acute thromboembolism in in vivo model. Our findings suggest that the enzyme may have a potential for treatment and prevention of thrombosis-relative diseases.     

Effect of protein C activator on overall haemostasis potential in donor and hip arthroplasty patient plasma

A method of overall haemostasis potential (OHP) determination for quantitative and rapid estimation of coagulation-fibrinolysis balance in plasma has been presented. The method is based on the analysis of the absorbance at 350 nm vs. time curve, which records the clot formation and dissolution in plasma in the presence of thromboplastin and t-PA. Three parameters of coagulation system--time, rate of formation and maximal turbidity of the clot, and three parameters of fibrinolytic system--half-, full-time and maximal rate of the clot dissolution, and main integral parameter--the area under the curve that characterizes the size and time of the clot existence and expresses OHP of plasma, can be determined by this method. It was shown that OHP value of patients plasma was 3.8 times more than that of the donor plasma. It is in concordance with elevated level of Fg (4.25 mg/ml), soluble fibrin (50 microg/ml), D dimer (630 ng/ml) and insufficient decrease of APC activity (93%) in patients. AcPC, added to donor and patient plasma, reduced OHP value 1.6 and 3.7 times, correspondingly. AcPC increased amidase activity of thrombin and APC in the donor plasma, and did not change that of plasmin. These data indicated that the effect of AcPC on OHP is mediated by formation ofAPC that helps to reduce the level of inhibitors in the investigated plasma.     

中介蝮蛇毒纤溶酶基因真核表达载体的构建及其功能的研究

目的:蛇毒纤维蛋白溶解酶能直接溶解纤维蛋白或纤维蛋白原,在心脑血管疾病的治疗方面具有潜在的应用价值。方法:采用双酶切技术从pMD18T-FLE I克隆载体上获得中介蝮蛇毒纤溶酶基因编码区,再将其亚克隆到真核表达载体pFASTBACHTa上,经转化、筛选和鉴定,获得重组真核表达质粒pFASTBACHTa-FLE。重组质粒经小鼠尾静脉快速注入小鼠体内,进行瞬时表达。结果:经SDS-PAGE和Western blot检测,表明在小鼠肝脏组织中有重组FLE蛋白表达。免疫组织化学检测证明该蛋白在小鼠肝脏组织中大量表达。纤维蛋白平板法鉴定该重组蛋白具有较高的纤溶活性,其活性呈现出剂量相关性和时间依赖性。因此为进一步对中介蝮蛇毒纤溶酶的应用奠定了坚实的基础。     

布莱克韦尔虫草的生物活性评价及其子实体的人工培育

虫草在世界范围内广泛分布,具有多种生物活性及较高的食药用价值。为进一步丰富虫草真菌资源,本研究对从广东韶关丹霞山采集到的一份野生虫草样品进行了菌株的分离鉴定、生物活性评价和子实体的诱导培养。通过形态学和系统发育分析,将菌株ZYJ0835鉴定为布莱克韦尔虫草Cordyceps blackwelliae。利用5种不同的培养基进行液体发酵培养,发现该菌株的发酵上清液和菌丝体均具有抗氧化和纤溶活性。此外,该菌株还具有一定的抑菌活性。利用大米、小麦、柞蚕蛹3种培养基质,均成功诱导出子实体,并且人工培养的子实体也具有抗氧化和纤溶活性。本研究首次在中国境内报道布莱克韦尔虫草的分布,为进一步开发利用该虫草资源提供了理论依据。     

Purification of a fibrinolytic enzyme (myulchikinase) from pickled anchovy and its cytotoxicity to the tumor cell lines

A fibrinolytic enzyme, myulchikinase, from a Korean seasoning ingredient, myul-chi-jeot-gal, has been purified to electrophoretic homogeneity. The molecular mass of the myulchikinase was estimated to about 28 kDa by SDS-PAGE and gel filtration. Amino acid sequence of the NH2-terminal of myulchikinase showed significant homology with other fibrinolytic enzymes including trypsin from starfish, katsuwokinase, and rat pancreatic elastase II. The purified myulchikinase hydrolyzed various synthetic substrates with different substrate specificity and cytotoxic to the tumor cell lines.     

蚯蚓纤溶酶原激活剂的分离纯化及其性质

为了从赤子爱胜蚓中获得主要表现为纤溶酶原激活活性的蛋白酶,采用盐析、离子交换层析、凝胶过滤层析和疏水吸附层析从蚯蚓组织匀浆中纯化出6种具有纤溶活性的酶组分(F1、F2、F3、F4、F5和F6).它们均为单一多肽链;表观分子量分别为28500、29500、26100、26300、14850和32800;经非还原型SDSPAGE和扫描仪扫描,纯度分别为100%、95.2%、96.5%、93.6%、98%和97.8%;等电点(pI)均不高于3;SDSPAGE后,用Schiff试剂染色显示F5为糖蛋白;纯化的6种酶于20℃～50℃保温1h,酶活力基本不变;F1和F2、F3和F4、F5和F6分别在pH4～10、4～11、7～12范围内稳定;水解BAEE试验及纤溶活性抑制试验表明,F6既是丝氨酸蛋白酶,又是含金属离子的蛋白酶,其它5种酶为胰蛋白酶样的丝氨酸蛋白酶;免疫双扩散试验结果初步表明,F1和F5以及它们和其它4种组分之间无共同的抗原决定簇;用纤维蛋白平板法及以ChromozymU和ChromozymPL为底物测定,除F1外,其余5种酶的纤溶酶原激活活性明显强于其直接纤溶活性.     

Purification and characterization of fibrinolytic protease from Bacillus amyloliquefaciens MCC2606 and analysis of fibrin degradation product by MS/MS

A serine protease with preference for fibrin protein was purified and characterized from Bacillus amyloliquefaciens MCC2606, isolated from dosa batter. The protease was purified using ammonium sulfate precipitation, ion-exchange, and gel filtration chromatography. The degradation activity of the protease toward the fibrin was significantly higher compared with other protein substrates in the study. The molecular weight of the CFR15-protease was estimated to be 32?kDa based on SDS-PAGE. The purified enzyme exhibited both fibrinolytic and fibrinogenolytic activity. The optimum pH and temperature for the activity of the enzyme was found to be 10.5 and 45°C. A significant inhibition was seen with the protease inhibitors phenyl methyl sulphonyl fluoride and ethylene diamine tetra acetic acid and the activity of the enzyme was enhanced in presence of Mn²⁺. There was an observed increase in vitro activated partial thromboplastin time and prothrombin time of both time and dose dependent study. Among the four chains of fibrin, the β-chain of fibrin appears to be the primary component and site susceptible for CFR15-protease in early action as indicated by MS/MS analysis of initial degradation products. These results indicated that the CFR15-protease have the potential to be an effective fibrinolytic agent.     

Interaction of bromophenol blue with serum albumin: criteria for using dyes for assessing the state and quantity of protein

The optical properties of the complexes of the pH-dependent dye bromophenol blue (BPB) with human serum albumin were investigated by the spectrophotometric method. The solvatochromic longwave displacement of bound BPB-2 absorption and BPB-1/BPB-2 redistribution were shown to form the optical signal of complexes. Because of the distortion of the bound BPB-2 signal its quantity was determined as delta A630 = A630 - A660 and the use of lambda max as structural parameter was limited to low pH less than or equal to 3. The conclusion was made that BPB is inapplicable as a structural probe on account of low structural dependence of delta A630 and pH-limitation of lambda max used. The maximal absorption delta Amax = Amax - A660 and its structural independence were obtained in the region of 70-100% occupation of the dye-binding centers of the protein. It is the optimal conditions for the quantitative determination of protein. After maximal dye binding (15-16 molecules of BPB per 1 molecule of albumin) the aggregation and precipitation of the complexes occurred.