Goldfish's visual information processing patterns in food-reinforced discrimination learning between compound visual stimuli

Summary To examine how goldfish process and store information on compound visual stimuli, goldfish were trained with visual discriminative stimuli composed of varied colors and patterns using a Y-maze instrumental conditioning technique. The fish showed some very different types of information processing patterns depending upon the degree of discrimination difficulty of each constituent aspect (color and pattern). Those trained with compound stimuli with both a more easily discriminated aspect and a more difficult aspect learned the former selectively but did not learn the latter at all in spite of a high rate of training. Contrary to this, the fish trained with compound stimuli composed of two aspects with similar degrees of discrimination difficulty learned both aspects. In this case, only when fish were trained with compound stimuli composed of relatively more difficult aspects did they learn to discriminate between the stimuli more rapidly than the fish in each group trained with the constituent colored or patterned stimuli. These results were discussed in relation to visual processing patterns reported in other species and the mechanism of aspect selection.Abbreviations CP compound stimuli composed of VR and HB (7-mm ISBBs) - Cp compound stimuli composed of VR and HB (14-mm ISBBs) - cP compound stimuli composed of VG and HB (7-mm ISBBs) - cp compound stimuli composed of VG and HB (14-mm ISBBs) - HB horizontal patterns on blue background - HGra horizontal patterns on gray background - ISBBs interval spaces between bars - VG vertical patterns on green background - VGra vertical patterns on gray background - VR vertical patterns on red background     

Feature-short and feature-long discrimination learning in the pigeon: conditional control of a two-event temporal map

Eight pigeons were trained to peck an illuminated target key on discrete-trial fixed-interval schedules of reinforcement by food. Four birds were exposed to a feature-short (FS) task where a feature light signaled shortening of the forthcoming target-outcome interval from 30 to 15s, while the other four birds were exposed to a feature-long (FL) task where a feature light signaled extension of the forthcoming target-outcome interval from 15 to 30s. The discrimination performance measured by differential temporal distributions of pecks between featured and non-featured target trials suggested that the target-food temporal map was under conditional control of the feature light in both groups. The FS discrimination was more difficult to learn than the FL discrimination. This FS inferiority implies that our birds did not resort on the simple temporal discrimination by timing from the trial onset. The simple temporal discrimination account was also negated by the finding that increasing the feature-target gap did not have a predicted effect on the response distribution.     

Concurrent recall of serially learned visual discrimination problems in dwarf goats (Capra hircus)

Studies of cognitive ability in farm animals are valuable, not only because they provide indicators of the commonality of comparative influence, but understanding farm animal cognition may also aid in management and treatment procedures. Here, eight dwarf goats (Capra hircus) learned a series of 10 visual four-choice discriminations using an automated device that allowed individual ad lib. access to the test setup while staying in a familiar environment and normal social setting. The animals were trained on each problem for 5 days, followed by concurrent testing of the current against the previous problem. Once all 10 problems had been learned, they were tested concurrently over the course of 9 days. In initial training, all goats achieved criterion learning levels on nearly all problems within 2 days and under 200 trials. Concurrently presenting the problems trained in adjacent sessions did not impair performance on either problem relative to single-problem learning. Upon concurrent presentation of all 10 previously learned problems, at least half were well-remembered immediately. Although this test revealed a recency effect (later problems were better remembered), many early-learned problems were also well-retained, and 10-item relearning was quite quick. These results show that dwarf goats can retain multiple-problem information proficiently and can do so over periods of several weeks. From an ecological point of view, the ability to form numerous associations between visual cues offered by specific plants and food quality is an important pre-grazing mechanism that helps goats exploit variation in vegetation and graze selectively.     

Acquisition and transfer of visual Go/No-go discrimination by a chimpanzee

An adolescent female chimpanzee was trained to press a key in the presence of a computer-graphic geometric figure (“Go” stimulus) within 5 sec and not to press the key during 5-sec presentations of another figure (“No-go” stimulus) with food reinforcement. In the acquisition training, the accuracy of performance increased primarily as a result of learning to inhibit key presses in No-go trials. The chimpanzee acquired this “Go/No-go” visual discrimination task in 1,260 trials. She was then given 14 successive transfer problems. The results for these problems suggested that learning-set formation and repeated use of the same discriminative stimuli both influenced transfer to new problems.     

Chromatic and achromatic stimulus discrimination of long wavelength (red) visual stimuli by the honeybee Apis mellifera

It has long been assumed that bees cannot see red. However, bees visit red flowers, and the visual spectral sensitivity of bees extends into wavelengths to provide sensitivity to such flowers. We thus investigated whether bees can discriminate stimuli reflecting wavelengths above 560 nm, i.e., which appear orange and red to a human observer. Flowers do not reflect monochromatic (single wavelength) light; specifically orange and red flowers have reflectance patterns which are step functions, we thus used colored stimuli with such reflectance patterns. We first conditioned honey bees Apis mellifera to detect six stimuli reflecting light mostly above 560 nm and found that bees learned to detect only stimuli which were perceptually very different from a bee achromatic background. In a second experiment we conditioned bees to discriminate stimuli from a salient, negative (un-rewarded) yellow stimulus. In subsequent unrewarded tests we presented the bees with the trained situation and with five other tests in which the trained stimulus was presented against a novel one. We found that bees learned to discriminate the positive from the negative stimulus, and could unambiguously discriminate eight out of fifteen stimulus pairs. The performance of bees was positively correlated with differences between the trained and the novel stimulus in the receptor contrast for the long-wavelength bee photoreceptor and in the color distance (calculated using two models of the honeybee colors space). We found that the differential conditioning resulted in a concurrent inhibitory conditioning of the negative stimulus, which might have improved discrimination of stimuli which are perceptually similar. These results show that bees can detect long wavelength stimuli which appear reddish to a human observer. The mechanisms underlying discrimination of these stimuli are discussed. Handling Editor: Lars Chittka.     

Summation and subtraction using a modified autoshaping procedure in pigeons

A modified autoshaping paradigm (significantly different from those previously reported in the summation literature) was employed to allow for the simultaneous assessment of stimulus summation and subtraction in pigeons. The response requirements and the probability of food delivery were adjusted such that towards the end of training 12 of 48 trials ended in food delivery, the same proportion as under testing. Stimuli (outlines of squares of three sizes and colors: A, B, and C) were used that could be presented separately or in any combination of two or three stimuli. Twelve of the pigeons (summation groups) were trained with either A, B, and C or with AB, BC, and CA, and tested with ABC. The remaining 12 pigeons (subtraction groups) received training with ABC but were tested with A, B, and C or with AB, BC, and CA. These groups were further subdivided according to whether stimulus elements were presented either in a concentric or dispersed manner. Summation did not occur; subtraction occurred in the two concentric groups. For interpretation of the results, configural theory, the Rescorla-Wagner model, and the composite-stimulus control model were considered. The results suggest different mechanisms responsible for summation and subtraction.     

Prenatal learning in an Australian songbird: habituation and individual discrimination in superb fairy-wren embryos

Embryos were traditionally considered to possess limited learning abilities because of the immaturity of their developing brains. By contrast, neonates from diverse species show behaviours dependent on prior embryonic experience. Stimulus discrimination is a key component of learning and has been shown by a handful of studies in non-human embryos. Superb fairy-wren embryos (Malurus cyaneus) learn a vocal password that has been taught to them by the attending female during incubation. The fairy-wren embryos use the learned element as their begging call after hatching to solicit more parental feeding. In this study, we test whether superb fairy-wren embryos have the capacity to discriminate between acoustical stimuli and whether they show non-associative learning. We measured embryonic heart rate response using a habituation/dishabituation paradigm with eggs sourced from nests in the wild. Fairy-wren embryos lowered their heart rate in response to the broadcasts of conspecific versus heterospecific calls, and in response to the calls of novel conspecific individuals. Thus, fairy-wrens join humans as vocal-learning species with known prenatal learning and individual discrimination.     

Rats can discriminate illuminance,but not magnetic fields,as a stimulus for learning a two-choice discrimination

In each of the two experiments, nine rats were trained for 64 trials (eight trials per day) to determine if they could acquire a two-choice discrimination based on a specified discriminative stimulus (S(D)). In one experiment, the S(D) was a change in ambient illumination, while in the second experiment the S(D) was a change in the combination of sinusoidal 60 Hz and static magnetic field (MF) and any cues attendant to energizing the coils that produced the MF exposure. The rats that had a change in illuminance as the S(D) learned the two-choice task easily, P <.001, whereas the rats having a change in MFs as the S(D) did not.     

A locus for an auditory processing deficit and language impairment in an extended pedigree maps to 12p13.31‐q14.3

Despite the apparent robustness of language learning in humans, a large number of children still fail to develop appropriate language skills despite adequate means and opportunity. Most cases of language impairment have a complex etiology, with genetic and environmental influences. In contrast, we describe a three‐generation German family who present with an apparently simple segregation of language impairment. Investigations of the family indicate auditory processing difficulties as a core deficit. Affected members performed poorly on a nonword repetition task and present with communication impairments. The brain activation pattern for syllable duration as measured by event‐related brain potentials showed clear differences between affected family members and controls, with only affected members displaying a late discrimination negativity. In conjunction with psychoacoustic data showing deficiencies in auditory duration discrimination, the present results indicate increased processing demands in discriminating syllables of different duration. This, we argue, forms the cognitive basis of the observed language impairment in this family. Genome‐wide linkage analysis showed a haplotype in the central region of chromosome 12 which reaches the maximum possible logarithm of odds ratio (LOD) score and fully co‐segregates with the language impairment, consistent with an autosomal dominant, fully penetrant mode of inheritance. Whole genome analysis yielded no novel inherited copy number variants strengthening the case for a simple inheritance pattern. Several genes in this region of chromosome 12 which are potentially implicated in language impairment did not contain polymorphisms likely to be the causative mutation, which is as yet unknown.     

Gene transfer from a bacterium injected into an aquifer to an indigenous bacterium

Two novel 3-chlorobenzoate-degrading bacteria were previously isolated from an aquifer in which no such bacteria could be enriched prior to the introduction of the 3-chlorobenzoate-degrading strain, Pseudomonas sp. B13. To understand the origin of 3-chlorobenzoate-degrading genes in the two novel isolates, the 16S ribosomal RNA, clcD (dienelactone hydrolase) and clcA (chlorocatechol oxygenase) genes from these bacteria were amplified and sequenced. The partial 16S rRNA gene sequences and REP-PCR patterns showed that these two novel isolates were identical but differed from strain B13. Phylogenetic analyses revealed that the novel isolates were closely related to Alcaligenes eutrophus in the beta subclass of the Proteobacteria, whereas strain B13 was related to Pseudomonas aeruginosa and P. mendocina in the gamma subclass of the Proteobacteria. In contrast, the clcD and clcA gene sequences were identical on strain B13 and these two isolates, indicating that the 3-chlorobenzoate-degrading genes were transferred from strain B13 to these isolates. What cannot be established is when this transfer occurred.     

A blueprint for vocal learning: auditory predispositions from brains to genomes

Memorizing and producing complex strings of sound are requirements for spoken human language. We share these behaviours with likely more than 4000 species of songbirds, making birds our primary model for studying the cognitive basis of vocal learning and, more generally, an important model for how memories are encoded in the brain. In songbirds, as in humans, the sounds that a juvenile learns later in life depend on auditory memories formed early in development. Experiments on a wide variety of songbird species suggest that the formation and lability of these auditory memories, in turn, depend on auditory predispositions that stimulate learning when a juvenile hears relevant, species-typical sounds. We review evidence that variation in key features of these auditory predispositions are determined by variation in genes underlying the development of the auditory system. We argue that increased investigation of the neuronal basis of auditory predispositions expressed early in life in combination with modern comparative genomic approaches may provide insights into the evolution of vocal learning.     

Responses of mink to auditory stimuli: Prerequisites for applying the ‘cognitive bias’ approach

The aim of the study was to determine and validate prerequisites for applying a cognitive (judgement) bias approach to assessing welfare in farmed mink (Neovison vison). We investigated discrimination ability and associative learning ability using auditory cues. The mink (n = 15 females) were divided into two groups (High, n = 8; Low, n = 7, representing the frequency of the tone they were habituated to, 18 and 2 kHz respectively) and were tested using a habituation–dishabituation procedure in experiment 1. In experiment 2 one auditory stimulus was followed by an inter-trial-interval (safe/neutral situation), whereas another auditory stimulus was followed by an aversive stimulus (air blow) before the inter-trial-interval (danger situation). We observed behaviour including latencies to show a response during both experiments. The High mink showed significant habituation in experiment 1 but the Low mink only showed habituation in experiment 2. Regardless of the frequency used (2 and 18 kHz), cues predicting the danger situation initially elicited slower responses compared to those predicting the safe situation but quickly became faster. Using auditory cues as discrimination stimuli for female farmed mink in a judgement bias approach would thus appear to be feasible. However several specific issues are to be considered in order to successfully adapt a cognitive bias approach to mink, and these are discussed.     

Sometimes slower is better: slow-exploring birds are more sensitive to changes in a vocal discrimination task

Animal personality, defined as consistent individual differences across context and time, has attracted much recent research interest in the study of animal behaviour. More recently, this field has begun to examine how such variation arose and is maintained within populations. The habitat-dependent selection hypothesis, which posits that animals with differing personality types may fare better (i.e. have a fitness advantage) in different habitats, suggests one possible mechanism. In the current experiment, we tested whether slow- and fast-exploring black-capped chickadees (Poecile atricapillus), determined by performance in a novel environment exploration task, perform differentially when the demands of an acoustic operant discrimination (cognitive) task were altered following successful task acquisition. We found that slow-exploring birds learn to reverse previously learned natural category rules more quickly than faster exploring conspecifics. In accordance with the habitat-dependent selection hypothesis, and previous work with great tits (Parus major), a close relative of the black-capped chickadee, our results suggest that fast-exploring birds may perform better in stable, predictable environments where forming a routine is advantageous, while slow-exploring birds are favoured in unstable, unpredictable environments, where task demands often change. Our results also support a hypothesis derived from previous work with great tits; slow-exploring birds may be generally more flexible (i.e. able to modify their behaviour in accordance with changes in environmental stimuli) in some learning tasks.     

A naturally occurring horizontal gene transfer from a eukaryote to a prokaryote

Summary Naturally occurring horizontal gene transfers between nonviral organisms are difficult to prove. Only with the availability of sequence data from a wide variety of organisms can a convincing case be made. In the case of putative gene transfers between prokaryotes and eukaryotes, the minimum requirements for inferring such an event include (1) sequences of the transferred gene or its product from several appropriately divergent eukaryotes and several prokaryotes, and (2) a similar set of sequences from the same (or closely related organisms) for another gene or genes. Given these criteria, we believe that a strong case can be made forEscherichia coli having acquired a second glyceraldehyde-3-phosphate dehydrogenase gene from some eukaryotic host. Ancillary observations on the general rate of change and the time of the prokaryote-eukaryote divergence support the notion.     

Mycorrhizae transfer carbon from a native grass to an invasive weed: evidence from stable isotopes and physiology

Invasive exotic weeds pose one of the earth's most pressing environmental problems. Although many invaders completely eliminate native plant species from some communities, ecologists know little about the mechanisms by which these exotics competitively exclude other species. Mycorrhizal fungi radically alter competitive interactions between plants within natural communities, and a recent study has shown that arbuscular mycorrhizal (AM) fungi provide a substantial competitive advantage to spotted knapweed, Centaurea maculosa, a noxious perennial plant that has spread throughout much of the native prairie in the northwestern U.S. Here we present evidence that this advantage is potentially due to mycorrhizally mediated transfer of carbon from a native bunchgrass, Festuca idahoensis, to Centaurea. Centaurea maculosa, Festuca idahoensis (Idaho fescue, C₃), and Bouteloua gracilis (blue gramma, C₄) were grown in the greenhouse either alone or with Centaurea in an incomplete factorial design with and without AM fungi. Centaurea biomass was 87–168% greater in all treatments when mycorrhizae were present in the soil (P < 0.0001). However, Centaurea biomass was significantly higher in the treatment with both mycorrhizae and Festuca present together than in any other treatment combination (P < 0.0001). This high biomass was attained even though Centaurea photosynthetic rates were 14% lower when grown with Festuca and mycorrhizae together than when grown with Festuca without mycorrhizae. Neither biomass nor photosynthetic rates of Centaurea were affected by competition with the C₄ grass Bouteloua either with or without mycorrhizae. The stable isotope signature of Centaurea leaves grown with Festuca and mycorrhizae was more similar to that of Festuca, than when Centaurea was grown alone with mycorrhizae (P = 0.06), or with Festuca but without mycorrhizae (P = 0.09). This suggests that carbon was transferred from Festuca to the invasive weed. We estimated that carbon transferred from Festuca by mycorrhizae contributed up to 15% of the aboveground carbon in Centaurea plants. Our results indicate that carbon parasitism via AM soil fungi may be an important mechanism by which invasive plants out compete their neighbors, but that this interaction is highly species-specific.     

Learning to reach by reinforcement learning using a receptive field based function approximation approach with continuous actions

Reinforcement learning methods can be used in robotics applications especially for specific target-oriented problems, for example the reward-based recalibration of goal directed actions. To this end still relatively large and continuous state-action spaces need to be efficiently handled. The goal of this paper is, thus, to develop a novel, rather simple method which uses reinforcement learning with function approximation in conjunction with different reward-strategies for solving such problems. For the testing of our method, we use a four degree-of-freedom reaching problem in 3D-space simulated by a two-joint robot arm system with two DOF each. Function approximation is based on 4D, overlapping kernels (receptive fields) and the state-action space contains about 10,000 of these. Different types of reward structures are being compared, for example, reward-on- touching-only against reward-on-approach. Furthermore, forbidden joint configurations are punished. A continuous action space is used. In spite of a rather large number of states and the continuous action space these reward/punishment strategies allow the system to find a good solution usually within about 20 trials. The efficiency of our method demonstrated in this test scenario suggests that it might be possible to use it on a real robot for problems where mixed rewards can be defined in situations where other types of learning might be difficult. This work was supported by EU-Grant PACO-PLUS.     

Lateral gene transfer of a multigene region from cyanobacteria to dinoflagellates resulting in a novel plastid-targeted fusion protein

The number of cases of lateral or horizontal gene transfer ineukaryotic genomes is growing steadily, but in most cases, neitherthe donor nor the recipient is known, and the biological implicationsof the transfer are not clear. We describe a relatively well-definedcase of transfer from a cyanobacterial source to an ancestorof dinoflagellates that diverged before Oxyrrhis but after Perkinsus.This case is also exceptional in that 2 adjacent genes, a paralogueof the shikimate biosynthetic enzyme AroB and an O-methyltransferase(OMT) were transferred together and formed a fusion proteinthat was subsequently targeted to the dinoflagellate plastid.Moreover, this fusion subsequently reverted to 2 individualgenes in the genus Karlodinium, but both proteins maintainedplastid localization with the OMT moiety acquiring its own plastid-targetingpeptide. The presence of shikimate biosynthetic enzymes in theplastid is not unprecedented as this is a plastid-based pathwayin many eukaryotes, but this species of OMT has not been associatedwith the plastid previously. It appears that the OMT activitywas drawn into the plastid simply by virtue of its attachmentto the AroB paralogue resulting from their cotransfer and oncein the plastid performed some essential function so that itremained plastid targeted after it separated from AroB. Genefusion events are considered rare and likely stable, and suchan event has recently been used to argue for a root of the eukaryotictree. Our data, however, show that exact reversals of fusionevents do take place, and hence gene fusion data are difficultto interpret without knowledge of the phylogeny of the organisms—thereforetheir use as phylogenetic markers must be considered carefully.