一株产琼胶酶细菌的分离、鉴定及其琼胶酶基本性质

【目的】分离海洋来源的琼胶酶产生菌,对其进行分类鉴定,并研究其所产琼胶酶的基本酶学性质,为琼胶酶的应用研究及开发利用奠定基础。【方法】通过以琼脂为唯一碳源的选择培养基分离产琼胶酶的菌株;利用16S rRNA基因序列分析、表型和生理生化特征对菌株进行鉴定;通过DNS-还原糖法测定琼胶酶活性;利用显色底物法测定琼胶酶的类型;对菌株所产琼胶酶粗酶的酶学性质进行初步研究。【结果】分离到一株产琼胶酶的菌株NTa,16S rRNA基因序列分析显示该菌株属于寡养单胞菌属(Stenotrophomonas sp.);该菌株主要产胞外琼胶酶,可分泌α-琼胶酶和β-琼胶酶;琼胶酶粗酶的最适反应温度和pH分别为40℃和7.0,并且琼胶酶在温度低于30℃,pH为7.0-9.0时稳定;Ca2+对琼胶酶粗酶具有促进作用,Ag+、Fe2+、Ba2+、Mn2+、Cu2+、Zn2+和Fe3+均可不同程度地抑制酶的活性;EDTA对琼胶酶粗酶活性具有抑制作用;琼胶酶粗酶对检测的抑制剂、去垢剂及变性剂有较好的抗性。【结论】海洋细菌Stenotrophomonas sp.NTa是一种新型的产琼胶酶菌株,可同时分泌α-琼胶酶和β-琼胶酶,具有潜在开发利用价值。     

海洋细菌Agarivorans albus NBRC102603琼胶酶的分离纯化

利用盐析、分子筛和离子交换等方法对海洋细菌Agarivorans albus NBRC102603分泌的琼胶酶粗酶液进行分离纯化,得到琼胶酶A和琼胶酶B.琼胶酶A纯化倍数为17.51倍,酶比活力为881.82 U/mg;琼胶酶B纯化倍数为16.64倍,酶比活力为838.32 U/mg.纯化的琼胶酶经SDS-PAGE检测,显示为单一条带,其相对分子质量分别为酶A 8.36×104和酶B 3.68×104.     

琼胶酶研究进展*

琼胶酶是一种多糖水解酶,根据降解琼脂糖的作用方式不同,可以分为α-琼胶酶（EC3.2.1.-）和β-琼胶酶（EC3.2.1.81）。中从琼胶酶的分类及酶活测定,酶的来源,产酶微生物的酶系及酶学性质,琼胶酶的分子生物学研究,酶的应用几个方面综述了琼胶酶的研究进展。     

黄海日照海域部分可培养细菌的分离、初步鉴定及产琼胶酶细菌的筛选

海洋细菌在海洋的物质与能量循环中起着非常重要的作用。为了适应复杂多变的海洋环境,海洋细菌在物种和基因方面表现出极高的丰富度。[目的] 对中国黄海日照海域部分可培养细菌进行分离、初步鉴定,同时筛选产琼胶酶菌株。[方法] 对从日照海域河流入海口和潮间带沙样和海水中分离到的73株细菌进行了16S rRNA基因序列测定,并进行序列同源性分析。同时检测了这些菌株对琼脂的降解能力。[结果] 结果显示,分离到的73株细菌属于4个门、13个科、34个属。18株细菌可能是新分类单元,其中16株为潜在新种,2株为可能的新属。73株细菌中,5株菌具有降解琼脂的能力,最高的琼胶酶活可达到2.17±0.04 U/mL,其中4株嗜琼胶属的细菌降解琼脂糖的产物均为新琼四糖。[结论] 本研究丰富了人们对黄海海域可培养细菌多样性的理解,为新物种和新酶的研究提供了基础,并为琼胶酶的提取提供了高产菌株。     

极区低温海洋细菌及其产酶情况的初步研究

通过对大量极区低温海洋菌株的分离、筛选及进一步的生理生化特性研究,获得1株最适生长温度为15℃、生长温度上限为35℃、产蛋白酶及多种多糖水解酶的耐冷细菌。该菌过氧化氢酶为阳性,具有弱嗜盐性;蔗糖、可溶性淀粉是有利于菌株生长的碳源物质,而酵母膏则是效果最佳的氮源物质。该菌株所产蛋白酶的最适作用温度为55℃,而淀粉酶、琼脂酶及纤维素酶的最适作用温度皆为35℃。     

海洋来源琼胶酶的分离纯化及酶学性质研究

采用Vibiro sp.ZC-1发酵制备琼胶酶,粗酶液经过中空纤维柱浓缩、硫酸铵沉淀、DEAE-阴离子交换层析,得到一个电泳纯的琼胶酶组分Aga ZC-1,其分子质量约为45k Da,比活力为114.613U/mg。对Aga ZC-1进行酶学性质分析,结果表明,其最适反应p H为7.0,在p H为5.0~9.0时保温1h仍能保持80%以上的酶活力;最适反应温度为50℃,在45℃条件下保温1h酶活力保持在60%以上。在高浓度(5mmol/L)下,Fe~(3+)、Cu~(2+)、Sn~(2+)和Zn~(2+)能完全抑制琼胶酶的活性,在低浓度(1mmol/L)下,Cu~(2+)、Ba~(2+)、Na~+、Zn~(2+)、Ag~+、Sr~(3+)、K+对琼胶酶活性具有明显抑制作用。琼胶酶的动力学参数K_m和V_(max)分别为0.538mg/ml和6.33μmol/(L·min),对琼胶底物具有高度专一性,降解产物主要为新琼四糖和新琼六糖。     

产琼胶酶菌株的筛选及其胞内外酶活的测定

本研究从江蓠、九孔成鲍和硅藻中分离筛选到8株产琼胶酶细菌,测定了它们胞内外琼胶酶的活性。结果表明,不论是胞内酶还是胞外酶,菌株JK333均具有最大的酶活。为对该菌株有更好的了解,我们运用API条带法对它进行了鉴定,结果证明它为Aeromonas trota（温和气单胞菌）。本工作的开展为构建琼胶酶高产工程菌,进而用于海藻资源的深加工及高值化生产提供了基础。     

海洋细菌Agarivorans sp.HZ105的琼胶降解酶系

通过克隆得到菌株Agarivorans sp.HZ105中3个琼胶酶基因,长度分别为2 988 bp、1 437 bp和1 362 bp,分别编码琼胶酶HZ1、HZ3和HZ4,分别属于糖苷水解酶GH50、GH118和GH16家族。将这些琼胶酶基因与质粒p ET-32(a)构建重组表达载体,转化大肠杆菌BL21(DE3),实现了琼胶酶基因的重组原核表达,制备了重组酶,研究了琼胶酶的酶解产物。琼胶酶HZ1降解琼脂糖以及高聚合度新琼寡糖(聚合度为8、10、12和14)得到新琼二糖和新琼四糖;琼胶酶HZ3降解琼脂糖的终产物是高聚合度新琼寡糖;琼胶酶HZ4降解琼脂糖和高聚合度新琼寡糖为新琼四糖和新琼六糖。因此推测菌株HZ105主要先用琼胶酶HZ3和HZ4降解琼脂糖为较高聚合度的新琼寡糖,随后这些寡糖被琼胶酶HZ1和HZ2(课题组先前报道的另一个琼胶酶)降解为低聚合度新琼寡糖。首次研究报道了Agarivorans属中能产生4个琼胶酶的细菌菌株及其琼胶降解酶系,丰富了有关细菌降解琼胶酶体系及其中各琼胶酶作用的研究和认识,也有利于菌株HZ105琼胶酶的有效开发应用。     

1株产单宁酶细菌的分离鉴定及产酶条件研究

从富含单宁酸的土壤中分离筛选出1株产单宁酶的细菌,经过菌落形态观察和16S rDNA分子生物学鉴定,该细菌为肺炎克雷伯菌。对该菌所产胞外单宁酶的发酵条件进行了初步研究,得出最佳产酶条件：培养温度37℃,培养时间36 h,培养转速180 r/min,单宁酸含量2 g/L,最佳碳源为葡萄糖,最佳氮源为氯化铵,此时所产单宁酶活力为0.8 U/mL。     

一种海洋琼胶酶的分离纯化、酶学性质研究及降解产物分析

摘要：【目的】对海洋Agarivorans albus QM38菌株所产琼胶酶的纯化工艺和酶学性质进行了研究。【方法】发酵液通过离心、(NH4 ) 2SO4盐析、DEAE-Sepharose Fast Flow 阴离子交换层析、Sephacry S-100 凝胶过滤等纯化步骤得到SDS-PAGE电泳级纯酶,并用质谱对酶的降解产物进行分析。【结果】得到琼胶酶A,纯化倍数为17.6倍,收率为15.21 %,SDS-PAGE测定其分子量为127.8 kDa。对琼胶酶A进行了进一步的性质分析,其最适反应温度为35 ℃,最适反应pH为7.6,最适底物浓度为0.9 %,多数金属离子为其活性抑制剂。琼胶酶A的降解产物经质谱分析主要为四糖和六糖。【结论】从菌株QM38的发酵液中纯化得到的琼胶酶A具有降解凝胶态琼胶的能力,其分子量与以往报道过的琼胶酶不同。     

Isolation of protoplasts from edible seaweeds

Protoplasts were isolated enzymatically from three species of Chlorophyta (Enteromorpha linza, Monostroma zostericola andUlva pertusa) with high yield and viability. An enzyme solution appropriate for protoplast isolation from the marine green algae was the following: 2% Cellulase Onozuka R-10, 1.0.M mannitol, pH 6.0. Protoplasts could not be obtained from members of Phaeophyta or Rhodophyta.     

Antibiotic activity of epiphytic bacteria isolated from intertidal seaweeds

A survey of antibiotic-producing bacteria from the microbial flora attached to seaweeds and the study of their antibiotic capacities were carried out. From 5 species of green and brown marine algae, 224 bacterial strains were isolated and tested for antibiotic production. A total of 38 strains displayed antibiotic activity, withEnteromorpha intestinalis being the source of the highest number of producer strains. All epiphytic bacteria with antibiotic activity were assigned to thePseudomonas-Alteromonas group. Antagonism assays among the isolates demonstrated that each producer strain inhibits the growth of the other producers, as well as of some nonproducer strains also isolated from seaweeds. Likewise, an autoinhibitory effect was observed in all antibiotic-producing strains. Antibacterial spectra of all the strains include activity againstStaphylococcus, Alcaligenes, Pseudomonas, Vibrio, Pasteurella, andAchromobacter. A preliminary characterization of the antibiotic substances produced by these epiphytic bacteria demonstrated that they are low molecular weight compounds, thermolabile, and anionic and are not affected by proteolytic enzymes. The role that these inhibitory substances can play in the natural environment is discussed.     

Isolation and characterization of a novel agarase-producing Pseudoalteromonas spp. bacterium from the guts of spiny turban shells

An agar-degrading bacterium was isolated from the guts of spiny turban shells. It was identified as a Pseudoalteromonas species and named Pseudoalteromonas sp. JYBCL 1. The viscosity of the inoculated agar medium decreased by more than 60% after 20 h cultivation. The agarase produced by the isolate had optimal activities at 35 degrees C and pH 7. The enzyme had extremely strong resistance to ionic stress compared with other known agarases. Its molecular mass was estimated at about 60 kDa by sodium dodecyl sulfate polyacrylamide gel electrophoresis. The agarase could saccharify Gelidium amansii directly, with an efficiency about half that compared with agar saccharification.     

大连新港原油降解微生物的分离纯化及降解效率评价

目的 在大连新港原油污染海域分离纯化出可降解原油的“土著”微生物,评价其原油降解能力,并研究提高降解效率的方法.方法 取海水样品进行富集培养,分离纯化出“土著”原油降解微生物,以16S rDNA测序法鉴定微生物种类,并采用MEGA 5.0进行多序列比对分析,选用最大相似法构建系统发育树.在实验室纯培养的条件下以气相色谱法对微生物的原油降解能力进行分析,选出优势菌种,再将优势菌种混配分析最佳原油降解条件.结果 分离纯化得到的“土著”原油降解微生物分属枯草芽孢杆菌属、动性球菌属、嗜冷菌属等多个菌属,“土著”原油降解微生物资源丰富,优势菌种的混配有助于加快和提高原油降解效率,是有效且对生态环境友好的生物处理法.     

Isolation of arsenite-oxidizing bacteria from industrial effluents and their potential use in wastewater treatment

The present study is aimed at assessing the ability of Klebsiella pneumoniae and Klebsiella variicola to oxidize trivalent arsenic into its pentavalent form. K. pneumoniae could tolerate As(III) (26.6 mM) and K. variicola could tolerate As(III) (24 mM). K. pneumoniae was able to resist Cd²⁺ and Hg²⁺ (1.3 mM), Cr⁶⁺ and Cu²⁺ (6.6 mM) and Ni²⁺ (5.3 mM). K. variicola resisted Cd²⁺ (2.6 mM), Hg²⁺ (4 mM), Cr⁶⁺ (6.6 mM), Cu²⁺ (9.3 mM) and Ni²⁺ (5.3 mM). The optimum temperature and pH for K. pneumoniae and K. variicola were 7 and 30°C, respectively. K. pneumoniae could oxidize 36% As(III), 64% and 87% from the medium after 24, 48 and 72 h, respectively. Likewise K. variicola was also able to oxidize 33% As(III) after 24 h, 59% after 48 h and 83% after 72 h from the medium. The presence of an induced protein having molecular weight around 14 kDa in the presence of arsenic points out a possible role of this protein in arsenite oxidation. The bacterial isolates can be employed to bioremediate As-containing wastes.     

酸性土壤中耐铝细菌的筛选鉴定及其耐铝能力分析

以含有1mmol／LAl3＋的s—LB培养基作为筛选培养基,从酸性土壤中分离到13株耐铝的细菌菌株,选取其中6株进行形态学分析,结果观察到这些菌株的菌体均呈杆状,其中1株为革兰阳性反应,其余5株为革兰阴性反应。以细菌通用引物扩增这些菌株的16SrDNA并测序,将得到的序列与GenBank中的序列进行BLAST比对,利用MEGA4．0软件,按照Neighbor-joining法构建系统进化树,这6个菌株分别与Enterobacter endosymbiont,Serratia marcescens ,Pantoea agglomerans ,Enterobacter aerogenes .Bacillus subtilis 和 Enterobacter asburiae的亲缘关系最近。将这些菌株接种到加有2mmol／LAl3＋、pH4．5的s—LB固体培养基上培养时,它们都能生长,说明这些菌株具有较好的耐铝能力,这些菌株为进一步研究细菌的耐铝机制提供了极好的材料。     

Isolation of iodine-producing bacteria from aquaria

Bacteria isolated from seawater aquaria gave rise to I₂ formation when cultivated aerobically in seawater containing 0.1% KI, 4% glycerol and 0.12% starch. On agar media small colonies appeared that produced a blue colour. It is concluded that the isolate catalyses the oxidation of I^– to I₂.     

高效钾长石分解菌株的筛选、鉴定及解钾活性研究

目的 筛选高效的钾长石分解细菌,并进行初步鉴定和解钾活性测定.方法 采集湖南省桂东县钾长石开采区土壤,利用钾长石为唯一钾源的选择性培养基筛选分离解钾细菌,通过摇瓶释钾试验复筛高效解钾菌株;同时,利用ICP-OES测定解钾菌的释钾效率.采用形态特征观察、生理生化特性检测和基于16S rRNA基因序列的系统发育分析初步鉴定高效解钾菌株.结果 分离获得11株生长良好的钾长石分解细菌,其中菌株JKC1、JKC2、JKC5和JKC7的解钾能力较强,解钾率分别为11.00％、11.50％、12.70％和11.70％.经初步鉴定JKC1为Bacillus megaterium,JKC2为Bacillus aryabhattai,JKC5为Azotobacter chroococcum,JKC7为Microbacterium trichothecenolyticum.结论 菌株JKC1、JKC2、JKC5和JKC7是高效的钾长石分解菌,可作为微生物浸矿(钾长石)机制研究的候选菌株.     

Isolation of novel pelagic bacteria from the German bight and their seasonal contributions to surface picoplankton.

We tested new strategies for the isolation of abundant bacteria from coastal North Sea surface waters, which included reducing by several orders of magnitude the concentrations of inorganic N and P compounds in a synthetic seawater medium. Agar plates were resampled over 37 days, and slowly growing colonies were allowed to develop by repeatedly removing all newly formed colonies. A fivefold increase of colonies was observed on plates with reduced nutrient levels, and the phylogenetic composition of the culture collection changed over time, towards members of the Roseobacter lineage and other alpha-proteobacteria. Novel gamma-proteobacteria from a previously uncultured but cosmopolitan lineage (NOR5) formed colonies only after 12 days of plate incubation. A time series of German Bight surface waters (January to December 1998) was screened by fluorescence in situ hybridization (FISH) with isolate-specific and general probes. During spring and early summer, a prominent fraction of FISH-detectable bacteria (mean, 51%) were affiliated with the Cytophaga-Flavobacterium group (CF) of the Bacteroidetes. One Cytophaga sp. lineage with cultured representatives formed almost 20% of the CF group. Members of the Roseobacter cluster constituted approximately 50% of alpha-proteobacteria, but none of the Roseobacter-related isolates formed populations of >1% in the environment. Thus, the readily culturable members of this clade are probably not representative of Roseobacter species that are common in the water column. In contrast, members of NOR5 were found at high abundances (>10(5) cells ml(-1)) in the summer plankton. Some abundant pelagic bacteria are apparently able to form colonies on solid media, but appropriate isolation techniques for different species need to be developed.