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1.
Local dynamics of interhelical loops in bacteriorhodopsin (bR), the extracellular BC, DE and FG, and cytoplasmic AB and CD loops, and helix B were determined on the basis of a variety of relaxation parameters for the resolved 13C and 15N signals of [1-13C]Tyr-, [15N]Pro- and [1-13C]Val-, [15N]Pro-labeled bR. Rotational echo double resonance (REDOR) filter experiments were used to assign [1-13C]Val-, [15N]Pro signals to the specific residues in bR. The previous assignments of [1-13C]Val-labeled peaks, 172.9 or 171.1 ppm, to Val69 were revised: the assignment of peak, 172.1 ppm, to Val69 was made in view of the additional information of conformation-dependent 15N chemical shifts of Pro bonded to Val in the presence of 13C-15N correlation, although no assignment of peak is feasible for 13C nuclei not bonded to Pro. 13C or 15N spin-lattice relaxation times (T1), spin-spin relaxation times under the condition of CP-MAS (T2), and cross relaxation times (TCH and TNH) for 13C and 15N nuclei and carbon or nitrogen-resolved, 1H spin-lattice relaxation times in the rotating flame (1H T) for the assigned signals were measured in [1-13C]Val-, [15N]Pro-bR. It turned out that V69-P70 in the BC loop in the extracellular side has a rigid β-sheet in spite of longer loop and possesses large amplitude motions as revealed from 13C and 15N conformation-dependent chemical shifts and T1, T2, 1H T and cross relaxation times. In addition, breakage of the β-sheet structure in the BC loop was seen in bacterio-opsin (bO) in the absence of retinal.  相似文献   

2.
L-[1,2-13C2,15N]Serine was prepared from [1,2-13C2,15N]glycine on a gram scale by the use of the enzyme serine hydroxymethyltransferase. The reaction was monitored by 13C-NMR spectroscopy. This is the first simultaneously 13C- and 15N-labelled serine isotopomer so far reported. Part of the product was directly converted by tryptophan synthase to L-[1,2-13C2,15N]tryptophan which could conveniently be purified and isolated as Boc-derivative in a yield of 71%. Most of the serine was isolated similarly but to remove remaining starting material in this case purification by column chromatography was required. © 1997 European Peptide Society and John Wiley & Sons, Ltd. J. Pep. Sci.3: 361–366 No. of Figures: 1. No. of Tables: 0. No. of References: 32  相似文献   

3.
《Inorganica chimica acta》1988,146(2):187-191
Lithium penta(cyano-13C)nitrosylruthenate (2-), Li2[Ru(13CN)5NO], in which the anion is the ruthenium analogue of the nitroprusside ion, has been synthesized at 90% isotopic enrichment, and characterized spectroscopically. Despite the very high level of 13C enrichment, no two-bond coupling 2J(13Cax-Ru13Ceq) was detected in the high-frequency 13C NMR spectrum of Li2[Ru(13CN)5NO], nor was any such coupling observed in Li4[Ru(13CN)5(15NO2)] although both two-bond couplings to 15N, 2J(13Cax-Ru15NO2) and 2J(13CeqRu15N) were observed. Li2[Ru(13CN)5(14NO)] reacted with excess of Li[15NO2] to yield Li4[Ru(13CN)5(15NO2)] only: no Li2[Ru(13CN)5(15NO)] was observed. Li4[Ru(13CN)5(14NO2)] however showed no exchange with Li[15NO2]. While [Ru(CN)5NO]2− reacted with both OH and SH in reactions similar to those of [Fe(CN)5NO]2−, no reactions were detected between [Ru(CN)5NO]2− and piperidine, [CH(CN)2], [CH(COCH3)2], MeS, or [S2O4]2−, all of which are known to react readily with [Fe(CN)5NO]2−  相似文献   

4.
When detached soybean Glycine max (L.) Merr. cv. Hark, nodules assimilate [13N]N2, the initial organic product of fixation is glutamine; glutamate becomes more highly radioactive than glutamine within 1 minute; 13N in alanine becoms detectable at 1 minute of fixation and increases rapidly between 1 and 2 minutes. After 15 minutes of fixation, the major 13N-labeled organic products in both detached and attached nodules are glutamate and alanine, plus, in the case of attached nodules, an unidentified substance, whereas [13N]glutamine comprises only a small fraction of organic 13N, and very little 13N is detected in asparagine. The fixation of [13N]N2 into organic products was inhibited more than 99% by C2H2 (10%, v/v). The results support the idea that the glutamine synthetase-glutamate synthase pathway is the primary route for assimilation of fixed nitrogen in soybean nodules.  相似文献   

5.
Abstract

The collagen tripeptide fragments Gly-Ala-Hyp, Gly-Pro-Ala and Gly-Pro-Hyp were generated by hydrolyzing collagen from pig-skin, cattle-skin, fish-scales and chicken-feet, respectively, with Streptomyces collagenase. Collagenase treatment increased the concentration of tripeptides in the hydrolysates by 13–15% (w/w). Of the three peptides, Gly-Pro-Hyp was a true peptidic inhibitor of dipeptidylpeptidase-IV (DPP-IV), because DPP-IV could not hydrolyze the bond between Pro-Hyp. This tripeptide was a moderately competitive inhibitor (Ki?=?4.5?mM) of DPP-IV, and its level in the collagen hydrolysates could be greatly increased (4–9% [w/w]) using Streptomyces collagenase.  相似文献   

6.
Summary The protein human carbonic anhydrase II (HCA II) has been isotopically labeled with 2H, 13C and 15N for high-resolution NMR assignment studies and pulse sequence development. To increase the sensitivity of several key 1H/13C/15N triple-resonance correlation experiments, 2H has been incorporated into HCA II in order to decrease the rates of 13C and 1HN T2 relaxation. NMR quantities of protein with essentially complete aliphatic 2H incorporation have been obtained by growth of E. coli in defined media containing D2O, [1,2-13C2, 99%] sodium acetate, and [15N, 99%] ammonium chloride. Complete aliphatic deuterium enrichment is optimal for 13C and 15N backbone NMR assignment studies, since the 13C and 1HN T2 relaxation times and, therefore, sensitivity are maximized. In addition, complete aliphatic deuteration increases both resolution and sensitivity by eliminating the differential 2H isotopic shift observed for partially deuterated CHnDm moieties.  相似文献   

7.
Isolated hepatocytes from fed rats were exposed for 120 min to D-glucose (10 mM) and either D-[1-13C]fructose, D-[2-13C]fructose or D-[6-13C]fructose (also 10 mM) in the presence of D2O. The identification and quantification of 13C-enriched D-fructose and its metabolites (D-glucose, L-lactate, L-alanine) in the incubation medium and the measurement of their deuterated isotopomers indicated, by comparison with a prior study conducted in the absence of exogenous D-glucose, that the major effects of the aldohexose were to increase the recovery of 13C-enriched D-fructose, decrease the production of 13C-enriched D-glucose, restrict the deuteration of the 13C-enriched isotopomers of D-glucose to those generated by cells exposed to D-[2-13C]fructose, and to accentuate the lesser deuteration of the C2 (as compared to C5) of 13C-enriched D-glucose derived from D-[2-13C]fructose. The ratio between C2-deuterated and C2-hydrogenated L-lactate, as well as the relative amounts of the CH3-, CH2D-, CHD2 and CD3- isotopomers of 13C-enriched L-lactate were not significantly different, however, in the absence or presence of exogenous D-glucose. These findings indicate that exogenous D-glucose suppressed the deuteration of the C1 of D-[1-13C]glucose generated by hepatocytes exposed to D-[1-13C]fructose or D-[6-13C]fructose, as otherwise attributable, in part at least, to gluconeogenesis from fructose-derived [3-13C]pyruvate, and apparently favoured the phosphorylation of D-fructose by hexokinase isoenzymes, probably through stimulation of D-fructose phosphorylation by glucokinase.  相似文献   

8.
Oxygenated nitrogen species, for example, the protonated form of nitrous acid (H2ONO+), dinitrogentrioxide (N2O3), dinitrogentetroxide (N2O4), or peroxynitrite (ONOO), can react with amines to form molecular nitrogen. These reactions can occur spontaneously with primary aliphatic amines or via cytochrome P450 catalysed reactions with secondary amines. In principle measurements of the excretion of the molecular nitrogen generated by these reactions could be used as an index of the levels of oxygenated nitrogen compounds acting as nitrosating agents. To test this idea, [15N2]urea (3 mmol) was administered orally to five patients infected with Helicobacter pylori (as diagnosed by the [13C]urea breath test) and to four healthy volunteers. All participants ingested 3-mmol sodium nitrate as a precursor for NA 5 min before the ingestion of the nitrogen tracer. During the test the participants breathed 100% oxygen to increase the sensitivity of detection of endogenous molecular nitrogen. After the administration of [15N2]urea, the patients with H. pylori showed significantly increased 15N enrichments of exhaled N2, expressed as δ value (‰), compared with healthy volunteers (patients: 3.5 ± 0.9 vs. volunteers: 1.3 ± 0.4; p < .05). We speculate that the endogenous production of molecular nitrogen is a protective process controlling the body NO and nitrite levels. The 15N breath technique allows the noninvasive estimation of the body nitrosation and could indicate the health risk, possibly the oxidative stress status, caused by highly reactive oxygenated nitrogen species and carbenium ion intermediates.  相似文献   

9.
The mid-day responses of wheat ear CO2 and water vapour exchange to full-season CO2 enrichment were investigated using a Free-Air CO2 Enrichment (FACE) apparatus. Spring wheat [Triticum aestivum (L). cv. Yecora Rojo] was grown in two experiments under ambient and elevated atmospheric CO2 (Ca) concentrations (approximately 370 μ mol mol 1 and 550 μ mol mol 1, respectively) combined first with two irrigation (Irr) schemes (Wet: 100% and Dry: 50% replacement of evapotranspiration) and then with two levels of nitrogen (N) fertilization (High: 350, Low: 70 kg ha 1 N). Blowers were used for Ca enrichment. Ambient Ca plots were exposed to blower induced winds as well the Ca × N but not in the Ca × Irr experiment. The net photosynthesis for the ears was increased by 58% and stomatal conductance (gs) was decreased by 26% due to elevated Ca under ample water and N supply when blowers were applied to both Ca treatments. The use of blowers in the Ca-enriched plots only during the Ca × Irr experiment (blower effect) and Low N supply restricted the enhancement of net photosynthesis of the ear due to higher Ca. In the latter case, the increase of net photosynthesis of the ear amounted to 26%. The decrease in gs caused by higher Ca was not affected by the blower effect and N treatment. The mid-day enhancement of net photosynthesis due to elevated Ca was higher for ears than for flag leaves and this effect was most pronounced under ample water and N supply. The contribution of ears to grain filling is therefore likely to increase in higher Ca environments in the future. In the comparison between Wet and Dry, the higher Ca did not alter the response of net photosynthesis of the ear and gs to Irr. However, Ca enrichment increased the drought tolerance of net photosynthesis of the glume and delayed the increase of the awn portion of net photosynthesis of the ear during drought. Therefore, the role of awns for maintaining high net photosynthesis of the ear under drought may decrease when Ca increases.  相似文献   

10.
Rat liver microsomal incubation systems containing the free radical spin trap, phenyl-t-butyl nitrone, as well as an NADPH generating system and [13C]CCl4 (90 atom % 13C) produce electron spin resonance spectra consistent with that expected for a trichloromethyl-phenyl-t-butyl nitrone adduct. This same spectrum is observed in a lipid extract of the liver from a rat orally administered [13C]CCl4 as well as in a solution of phenyl-t-butyl nitrone and [13C]CCl4 irradiated with ultraviolet light.  相似文献   

11.
A multiple-label stable isotope dilution assay for quantifying glutathione (GSH), glutathione disulfide (GSSG), and glutathione sulfonic acid in erythrocytes was developed. As the internal standards, [13C3,15N]glutathione, [13C4,15N2]glutathione disulfide, and [13C3,15N]glutathione sulfonic acid were used. Analytes and internal standards were detected by LC–MS/MS after derivatization of GSH with iodoacetic acid and dansylation of all compounds under study. The calibration functions for all analytes relative to their respective isotopologic standards revealed slopes close to 1.0 and negligible intercepts. As various labelings of the standards for GSH and GSSG were used, their simultaneous quantitation was possible, although GSH was partly oxidized to its disulfide during analysis. The degree of this artifact formation of GSSG was calculated from the abundance of the mixed disulfide formed from unlabeled GSH and its respective standard. Thus, the detected GSSG amount could be corrected for the artifact amount. In this way, the amount of GSSG in erythrocytes was found to be less than 0.5% of the GSH concentration. Similar to GSSG, the detected amount of glutathione sulfonic acid was found to be formed at least in part during the analytical process, but the degree could not be quantified.  相似文献   

12.
1H, 19F-HOESY studies on the ionic liquid based on 1-butyl-3-methylimidazolium tetrafluoroborate, [C4C1im]BF4, [C4C1im][N(OTf)2], and, partially, [C4C1im]PF6, are reported. The addition of methanol separates the ions; however, in dichloromethane solution the anions and cations show strong HOESY contacts even after dilution and taken together with the PGSE diffusion measurements, the data suggest strong ion pairing in this solvent.  相似文献   

13.
Tryptophan (Trp) residues are frequently found in the hydrophobic cores of proteins, and therefore, their side-chain conformations, especially the precise locations of the bulky indole rings, are critical for determining structures by NMR. However, when analyzing [U–13C,15N]-proteins, the observation and assignment of the ring signals are often hampered by excessive overlaps and tight spin couplings. These difficulties have been greatly alleviated by using stereo-array isotope labeled (SAIL) proteins, which are composed of isotope-labeled amino acids optimized for unambiguous side-chain NMR assignment, exclusively through the 13C–13C and 13C–1H spin coupling networks (Kainosho et al. in Nature 440:52–57, 2006). In this paper, we propose an alternative type of SAIL-Trp with the [ζ2,ζ3-2H2; δ1,ε3,η2-13C3; ε1-15N]-indole ring ([12Cγ, 12Cε2] SAIL-Trp), which provides a more robust way to correlate the 1Hβ, 1Hα, and 1HN to the 1Hδ1 and 1Hε3 through the intra-residue NOEs. The assignment of the 1Hδ1/13Cδ1 and 1Hε3/13Cε3 signals can thus be transferred to the 1Hε1/15Nε1 and 1Hη2/13Cη2 signals, as with the previous type of SAIL-Trp, which has an extra 13C at the Cγ of the ring. By taking advantage of the stereospecific deuteration of one of the prochiral β-methylene protons, which was 1Hβ2 in this experiment, one can determine the side-chain conformation of the Trp residue including the χ2 angle, which is especially important for Trp residues, as they can adopt three preferred conformations. We demonstrated the usefulness of [12Cγ,12Cε2] SAIL-Trp for the 12 kDa DNA binding domain of mouse c-Myb protein (Myb-R2R3), which contains six Trp residues.  相似文献   

14.
The effect of ambient ammonium (0.5 millimolar [14NH4]2SO4) added to a nutrient solution containing 1.0 millimolar K15NO3, 99 atom per cent 15N, upon [15N]nitrate assimilation and utilization of previously accumulated [14N]nitrate was investigated. Corn seedlings, 5-day-old dark-grown decapitated (experiment I) and 10-day-old light-grown intact (experiment II), which had previously been grown on K14NO3 nutrient solution, were used. In both experiments, the presence of ambient ammonium decreased [15N]nitrate influx (20% after 6 hours) without significantly affecting the efflux of previously accumulated [14N]nitrate. In experiment I, relative reduction of [15N]nitrate (reduction as a percentage of influx) was inhibited more than was [15N]nitrate influx. Nevertheless, in experiment I, where all reduction could be assigned to the root system, the absolute inhibition of reduction during the 12 hours (13 micromoles/root) was less than the absolute inhibition in influx (24 micromoles/root). The data suggest that the influence of ammonium on [15N]nitrate influx could not be totally accounted for by the decrease in the potential driving force which resulted from restricted reduction; an additional impact on the influx process is indicated. Reduction of [15N]nitrate in experiment II after 6 hours accounted for 30 and 18% of the tissue excess 15N in the control and ammonium treatments, respectively. Relative distribution of 15N between roots and exudate (experiment I), or between roots and shoots (experiment II) was not affected by ammonium. On the other hand, the accumulation of [15N]nitrate in roots, shoots, and xylem exudate was enhanced by ammonium treatment compared to the control, whereas the accumulation of reduced 15N was inhibited.  相似文献   

15.
Cut seedlings of Mercurialis annua L. were supplied with solutions containing [1-13C1]glucose or [U-13C4,15N1]aspartate. After 5–7 days, the pyridinone-type chromogen, hermidin, was isolated and analyzed by NMR spectroscopy. In the experiment with [1-13C1]glucose, five single-labelled isotopomers of hermidin were detected at high abundances (2.7–1.8 mol%). In the experiment with [U-13C4,15N1]aspartate, contiguous labelling was observed for carbon atoms 2 and 3 and the nitrogen atom in hermidin. The labelling patterns of hermidin and of amino acids from the same experiments rule out predominant formation of the pyridinone by pathways resembling the biosyntheses of vitamin-B6, anabasine, or polyketides, but suggest a pathway by condensation of aspartate and dihydroxyacetone phosphate affording nicotinate as a precursor of hermidin.  相似文献   

16.
This study investigates the effects of ethanol on neuronal and astroglial metabolism using 1H‐[13C]‐NMR spectroscopy in conjunction with infusion of [1,6‐13C2]/[1‐13C]glucose or [2‐13C]acetate, respectively. A three‐compartment metabolic model was fitted to the 13C turnover of GluC3, GluC4, GABAC2, GABAC3, AspC3, and GlnC4 from [1,6‐13C2]glucose to determine the rates of tricarboxylic acid (TCA) and neurotransmitter cycle associated with glutamatergic and GABAergic neurons. The ratio of neurotransmitter cycle to TCA cycle fluxes for glutamatergic and GABAegic neurons was obtained from the steady‐state [2‐13C]acetate experiment and used as constraints during the metabolic model fitting. 1H MRS measurement suggests that depletion of ethanol from cerebral cortex follows zero order kinetics with rate 0.18 ± 0.04 μmol/g/min. Acute exposure of ethanol reduces the level of glutamate and aspartate in cortical region. GlnC4 labeling was found to be unchanged from a 15 min infusion of [2‐13C]acetate suggesting that acute ethanol exposure does not affect astroglial metabolism in naive mice. Rates of TCA and neurotransmitter cycle associated with glutamatergic and GABAergic neurons were found to be significantly reduced in cortical and subcortical regions. Acute exposure of ethanol perturbs the level of neurometabolites and decreases the excitatory and inhibitory activity differentially across the regions of brain.

  相似文献   


17.
Vinculin is an essential protein involved in linking the actin cytoskeleton to sites of cell-cell and cell-matrix adhesion. Here we report the majority of the backbone 1HN, 15N, 13Cα, 13CO, and side chain 13Cβ NMR resonance assignments of the actin binding tail domain of vinculin (Vt).  相似文献   

18.
The ratio of two biosynthetic pathways was estimated, the C5 and Shemin pathways, to δ‐aminolevulinic acid (ALA, a biosynthetic intermediate of tetrapyrrole) from the 13C‐enrichment ratios (13C‐ER) at the carbon atoms of chl a (after conversion to methyl pheophorbide a) biosynthesized by Euglena gracilis G. A. Klebs when l ‐[3‐13C]alanine was used as a carbon source. On the basis of these estimations, we confirmed that ALA was efficiently biosynthesized via both the C5 and Shemin pathways in the plastids of E. gracilis, and we determined that the ratio of ALA biosynthesis via the Shemin pathway was increased in the ratio of 14%–67%, compared with that in our previous d ‐[1‐13C]glucose feeding experiment ( Iida et al. 2002 ). This carbon source dependence of the contributions of the two biosynthetic pathways might be related to activation of gluconeogenesis by the amino acid substrate. The methoxy carbon of the methoxycarbonyl group at C‐132 of chl a was labeled with the 13C‐carbon of l ‐[methyl13C]methionine derived from l ‐[3‐13C]alanine via [2‐13C]acetyl coenzyme A (CoA), through the atypical tricarboxylic acid (TCA) cycle, gluconeogenesis, and l‐ [3‐13C]serine. The phytyl moiety of chl a was also labeled on C‐P2, C‐P31, C‐P4, C‐P6, C‐P71, C‐P8, C‐P10, C‐P111, C‐P12, C‐P14, C‐P151, and C‐P16 from 13C‐isoprene (2‐[1,2‐methyl,3‐13C3]methyl‐1,3‐butadiene) generated from l ‐[3‐13C]alanine via [2‐13C]acetyl CoA.  相似文献   

19.
V. M. Sponsel 《Planta》1986,168(1):119-129
The stem growth in darkness or in continuous red light of two pea cultivars, Alaska (Le Le, tall) and Progress No. 9 (le le, dwarf), was measured for 13 d. The lengths of the first three internodes in dark-grown seedlings of the two cultivars were similar, substantiating previous literature reports that Progress No. 9 has a tall phenotype in the dark. The biological activity of gibberellin A20 (GA20), which is normally inactive in le le geno-types, was compared in darkness and in red light. Alaska seedlings, regardless of growing conditions, responded to GA20. Dark-grown seedlings of Progress No. 9 also responded to GA20, although red-light-grown seedlings did not. Gibberellin A1 was active in both cultivars, in both darkness and red light. The metabolism of [13C3H]GA20 has also been studied. In dark-grown shoots of Alaska and Progress No. 9 [13C3H]GA20 is converted to [13C3H]GA1, [13C3H]GA8, [13C]GA29, its 2-epimer, and [13C3H]GA29-catabolite. [13C3H] Gibberellin A1 was a minor product which appeared to be rapidly turned over, so that in some feeds only its metabolite, [13C3H]GA8, was detected. However results do indicate that the tall growth habit of Progress No. 9 in the dark, and its ability to respond to GA20 in the dark may be related to its capacity to 3-hydroxylate GA20 to give GA1. In red light the overall metabolism of [13C3H]GA20 was reduced in both cultivars. There is some evidence that 3-hydroxylation of [13C3H]GA20 can occur in red light-grown Alaska seedlings, but no 3-hydroxylated metabolites of [13C3H]GA20 were observed in red light-grown Progress. Thus the dwarf habit of Progress No. 9 in red light and its inability to respond to GA20 may be related, as in other dwarf genotypes, to its inability to 3-hydroxylate GA20 to GA1. However identification and quantification of native GAs in both cultivars showed that red-light-grown Progress does contain native GA1. Thus the inability of red light-grown Progress No. 9 seedlings to respond to, and to 3-hydroxylate, applied GA20 may be due to an effect of red light on uptake and compartmentation of GAs.Abbreviations AMO-1618 2-isopropyl-4-(trimethylammonium chloride)-5-methylphenyl piperidine-1-carboxylate - cv. cultivar - GC-MS gas chromatography-mass spectrometry - GA(n) gibberellin A(n) - HPLC high-pressure liquid chromatography  相似文献   

20.
Sun-Shine Yuan 《Steroids》1982,39(3):279-289
A-ring enollactones 1a, 1b or 9 derived from 4-cholesten-3-one, testosterone benzoate or 3-oxo-4-estren-17β-yl benzoate were condensed with [1,2-13C2]acetyl chloride to give intermediates 2a, 2b or 10. 2a and 2b were cyclized by acid or base to give 3,4-13C2-labeled 4-cholesten-3-one and testosterone, respectively. [3,4-13C2]4-Cholesten-3-one was converted via reduction of its trimethylsilyl enol ether to [3,4-13C2]cholesterol. Acetyl enollactone 10 was cyclized in acetic acid to [3,4-13C2]3-oxo-4-estren-17β-yl benzoate followed by aromatization and hydrolysis to produce [3,4-13C2]estradiol-17β. Alternatively, cyclization of 10 with base afforded [3,4-13C2]3-oxo-4-estren-17β-ol directly, which was then oxidized and aromatized to yield [3,4-13C2]estrone. Ozonolysis of progesterone, conversion to the diketal ester 16 and acylation followed by acid hydrolysis furnished [3,4-13C2]progesterone.  相似文献   

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