Marine Biodiversity in the Australian Region

The entire Australian marine jurisdictional area, including offshore and sub-Antarctic islands, is considered in this paper. Most records, however, come from the Exclusive Economic Zone (EEZ) around the continent of Australia itself. The counts of species have been obtained from four primary databases (the Australian Faunal Directory, Codes for Australian Aquatic Biota, Online Zoological Collections of Australian Museums, and the Australian node of the Ocean Biogeographic Information System), but even these are an underestimate of described species. In addition, some partially completed databases for particular taxonomic groups, and specialized databases (for introduced and threatened species) have been used. Experts also provided estimates of the number of known species not yet in the major databases. For only some groups could we obtain an (expert opinion) estimate of undiscovered species. The databases provide patchy information about endemism, levels of threat, and introductions. We conclude that there are about 33,000 marine species (mainly animals) in the major databases, of which 130 are introduced, 58 listed as threatened and an unknown percentage endemic. An estimated 17,000 more named species are either known from the Australian EEZ but not in the present databases, or potentially occur there. It is crudely estimated that there may be as many as 250,000 species (known and yet to be discovered) in the Australian EEZ. For 17 higher taxa, there is sufficient detail for subdivision by Large Marine Domains, for comparison with other National and Regional Implementation Committees of the Census of Marine Life. Taxonomic expertise in Australia is unevenly distributed across taxa, and declining. Comments are given briefly on biodiversity management measures in Australia, including but not limited to marine protected areas.     

Taxonomic Review of Creontiades Distant in Australia (Hemiptera: Miridae: Mirinae)

The two species of Creontiades Distant occurring in Australia, C. dilutus (Stål) (Australian endemic) and C. pacificus (Stål) (China, several countries in the Oriental and Australian regions including Tahiti and Micronesian islands) are redescribed, illustrated and their distributions are mapped. Megacoelum modestum (Distant) and C. virescens Reuter are synonymised with C. dilutus , and C. pallidifer (Walker) with C. pacificus. Available host plant information is provided for both species. C. dilutus , commonly known as green mirid, is a pest of cotton, potato, stone fruit, lucerne and other crops in certain parts of Australia. the generic limits of Creontiades and the closely related, world-wide distributed Megaceolum Fieber are reviewed based on examination of Australian species and the type species.     

Eastern Australian Pleurobranchomorpha (Gastropoda, Opisthobranchia)

Collections of pleurobranchomorph gastropods made in 1968 are described, and compared with material in the British Museum (Natural History) and with live Mediterranean specimens examined in the Naples Aquarium. All the eastern Australian species obtained are illustrated by line diagrams. Three species new for Australia are described, one is transferred to another known species, and six others are re-described. A list of the 12 species (with synonyms) reliably reported for eastern Australian waters concludes the paper, together with a key for their identification.     

Phylogeny of Australian Coptotermes (Isoptera: Rhinotermitidae) species inferred from mitochondrial COII sequences

Six Australian species of Coptotermes are traditionally recognized, but recent cuticular hydrocarbon studies suggest that some of these may represent more than one species. An understanding of the phylogenetic diversity of Australian Coptotermes, particularly the pest species, is likely to be important for the improvement of termite management strategies. A study of phylogenetic relationships among species of this genus was performed, based on the mitochondrial cytochrome oxidase (COII) gene, comparing the data with recent data from Asian species. Representatives of the species C. lacteus (Froggatt), C. frenchi Hill and C. michaelseni Silvestri were each found to form closely related monophyletic groups, however representatives of C. acinaciformis (Froggatt) were not. For C. acinaciformis, representatives from northern mound-building populations were found to form a distinct group to southern, tree-nesting forms. Among southern C. acinaciformis, two Western Australian representatives were found to be divergent from other populations. The results suggest that C. acinaciformis probably represents a complex of species rather than one, as has been suggested previously. One unidentified Coptotermes sp. taxon from Melbourne was found to be divergent from other taxa. Notably, some Australian species were more closely related to Asian species than other Australian species.     

Biogeography and speciation patterns of the golden orb spider genus Nephila (Araneae: Nephilidae) in Asia

The molecular phylogeny of the globally distributed golden orb spider genus Nephila (Nephilidae) was reconstructed to infer its speciation history, with a focus on SE Asian/W Pacific species. Five Asian, two Australian, four African, and one American species were included in the phylogenetic analyses. Other species in Nephilidae, Araneidae, and Tetragnathidae were included to assess their relationships with the genus Nephila, and one species from Uloboridae was used as the outgroup. Phylogenetic trees were reconstructed from one nuclear (18S) and two mitochondrial (COI and 16S) markers. Our molecular phylogeny shows that the widely distributed Asian/Australian species, N. pilipes, and an African species, N. constricta, form a clade that is sister to all other Nephila species. Nested in this Nephila clade are one clade with tropical and subtropical/temperate Asian/Australian species, and the other containing African and American species. The estimated divergence times suggest that diversification events within Nephila occurred during mid-Miocene to Pliocene (16 Mya-2 Mya), and these time periods were characterized by cyclic global warming/cooling events. According to Dispersal and Vicariance Analysis (DIVA), the ancestral range of the Asian/Australian clade was tropical Asia, and the ancestral range of the genus Nephila was either tropical Asia or Africa. We conclude that the speciation of the Asian/Australian Nephila species was driven by Neogene global cyclic climate changes. However, further population level studies comparing diversification patterns of sister species are needed to determine the mode of speciation of these species.     

The marine permian faunas of Westcrn Australia

The marine Permian faunus (about 350 species) of Western Australia are briefly reviewed and compared with Tethyan, eastern Australian and Gondwana faunas. The Western Australian faunal province has close affinities with the eastern Tethys (Salt Range, Timor) and is rather dissimilar to the eastern Australian province, although some Western Australian elements migrated into the northern (Queensland) and the southern (Tasmania) regions of the eastern province.     

Biogeographic patterns in the Australian chondrichthyan fauna

The major biogeographic structure and affinities of the Australian chondrichthyan fauna were investigated at both interregional and intraregional scales and comparisons made with adjacent bioregions. Faunal lists were compiled from six geographical regions with species from these regions assigned to distributional classes and broad habitat categories. Australian species were further classified on provincial and bathomic structure following bioregionalization outputs from regional marine planning. About 40% of the world's chondrichthyan fauna occurs in Indo-Australasia (482 species) of which 323 species are found in Australian seas. The tropical Australian component, of which c. 46% of taxa are regional endemics, is most similar to faunas of Indonesia, New Guinea and New Caledonia. The temperate Australian component is most similar to New Zealand and Antarctica with about half of its species endemic. Highest levels of Australian endemism exist in bathomes of the outer continental shelf and upper slope. A relatively high proportion of regional endemism (57% of species) on the slope in the poorly surveyed but species-rich Solanderian unit is probably due to high levels of large-scale habitat complexity in the Coral Sea. The richness of demersal assemblages on the continental shelf and slope appears to be largely related to the spatial complexity of the region and the level of exploration. Much lower diversity off Antarctica is consistent with the pattern in teleosts. The complex chondrichthyan fauna of Australia is confirmed as being amongst the richest of the mega-diverse Indo-West Pacific Ocean. Species-level compositions of regional faunas across Indo-Australasia differ markedly because of moderate to high levels of intraregional speciation. Faunal assemblages in Australian marine provinces and bathomes differ from each other, supporting a broader pattern for fishes that underpins a marine planning framework for the region.     

Key to the New Zealand species of Psyllaephagus Ashmead (Hymenoptera: Encyrtidae) with descriptions of three new species and a new record of the psyllid hyperparasitoid Coccidoctonus psyllae Riek (Hymenoptera: Encyrtidae)

Abstract  This paper records seven species of wasps in the genus Psyllaephagus (Hymenoptera: Encyrtidae) from New Zealand. All of these species are primary parasitoids of psylloids (Hemiptera: Psylloidea). Two are species previously described from New Zealand: P. acaciae Noyes and P. pilosus Noyes. Two are described Australian species which have established recently: P. bliteus Riek and P. gemitus Riek. Three new species are described here, from New Zealand: P. breviramus sp. nov., P. cornwallensis sp. nov. and P. richardhenryi sp. nov. All species are probably Australian in origin. A key to all seven Psyllaephagus species known from New Zealand is provided. An earlier first record of the Australian psyllid hyperparasitoid Coccidoctonus psyllae Riek (Hymenoptera: Encyrtidae), previously first recorded from New Zealand in 2006, is noted.     

Competition and facilitation between Australian and Spanish legumes in seven Australian soils

This paper evaluates the relative performance and competitive ability of seven legumes from the Iberian Peninsula, Spain (one already invasive in Australia), grown singly or pairwise with seven legumes from south‐western Australia in their own soils. Indices of growth used were root, shoot and total mass and shoot dimensions. Water content, xylem water potential during drying and nodule production were also measured. The index of competition used was the intensity of competition coefficient (ICC), which is suitable for additive designs. The Australian species usually grew larger than the Spanish species, in their presence or absence, although the results were sensitive to the index of growth or resource capture used. The Australian legumes usually possessed greater total water content than the co‐occurring Spanish legumes. At least five Australian species were less reduced or not affected at all by inter‐regional competition compared with growth in isolation. Two Australian legumes performed relatively poorly in the presence of at least four Spanish legumes. The ICC identified many instances of growth promotion (facilitation) of the Australian species, which we attribute to extra nitrogen obtained through enhanced nodulation of both cohabiting species. Five of the seven Spanish species were outcompeted by the Australian species, whereas the growth of two was sometimes facilitated. Although the Spanish legumes had greater competitive ability in the more fertile Australian soils, they remained competitively inferior to the Australian legumes in their first season of growth and none is likely to displace the native legumes at this stage of growth. Longer‐term field studies are needed to fully evaluate the potential invasiveness of perennial legumes.     

Review of Australian Asperoseius Chant, Euseius Wainstein, Okiseius Ehara and Phytoscutus Muma (Acari: Mesostigmata: Phytoseiidae) with a key to the genera of Australian Amblyseiinae and descriptions of two new species

Previous workers have used a conservative generic classification of the subfamily Amblyseiinae that treated most Australian Phytoseiidae as species in the genus Amblyseius Berlese. However, this lumping masks the occurrence of a number of genera recognised overseas, including some that contain important biological control agents. In this review, a key to the genera of Australian Amblyseiinae is provided and the Australian species in four amblyseiine genera are reviewed and keyed. Asperoseius Chant is represented by a single known Australian species, A. australiensis Fain and Krantz collected from a Culicoides midge in South Australia. Six species of Euseius Wainstein are recognised in Australia, including four endemics: E. dowdi (Schicha), E. elinae (Schicha), E. neovictoriensis (Schicha), and E. victoriensis (Schicha), and two Asia–Pacific species: E. noumeae (Schicha) and E. ovalis (Evans). Okiseius Ehara is represented in Australia by the previously described O. morenoi Schicha and O. domatorum (Schicha); the Asian species O. subtropicus Ehara (new record); and two new species, O. tribulation and O. cowbay described from tropical rainforest in Far North Queensland. Phytoscutus acaridophagus Collyer, a mite described from New Zealand, is reported in association with acarid mites ( Neotropacarus sp.) in Victoria and in Queensland.     

Relating species abundance distributions to species-area curves in two Mediterranean-type shrublands

Abstract. Based on both theoretical and empirical studies there is evidence that different species abundance distributions underlie different species‐area relationships. Here I show that Australian and Californian shrubland communities (at the scale from 1 to 1000 m²) exhibit different species‐area relationships and different species abundance patterns. The species‐area relationship in Australian heathlands best fits an exponential model and species abundance (based on both density and cover) follows a narrow log normal distribution. In contrast, the species‐area relationship in Californian shrublands is best fit with the power model and, although species abundance appears to fit a log normal distribution, the distribution is much broader than in Australian heathlands. I hypothesize that the primary driver of these differences is the abundance of small‐stature annual species in California and the lack of annuals in Australian heathlands. Species‐area is best fit by an exponential model in Australian heathlands because the bulk of the species are common and thus the species‐area curves initially rise rapidly between 1 and 100 m². Annuals in Californian shrublands generate very broad species abundance distributions with many uncommon or rare species. The power function is a better model in these communities because richness increases slowly from 1 to 100 m² but more rapidly between 100 and 1000 m² due to the abundance of rare or uncommon species that are more likely to be encountered at coarser spatial scales. The implications of this study are that both the exponential and power function models are legitimate representations of species‐area relationships in different plant communities. Also, structural differences in community organization, arising from different species abundance distributions, may lead to different species‐area curves, and this may be tied to patterns of life form distribution.     

Genus Carvaka Distant in Australia (Hemiptera: Cicadellidae: Selenocephalinae)

Abstract  The leafhopper genus Carvaka Distant (Hemiptera: Cicadellidae: Selenocephalinae) in Australia is reviewed in light of recent publications on the subfamily Selenocephalinae in the Oriental region. The genus Exitianellus Evans is transferred from the subfamily Deltocephalinae to the Paraboloponini and synonymised with Carvaka . Carvaka elegantula (Evans) comb. nov. is redescribed and three new species, C. mouldsorum , C. maculata and C. flava are added to the genus. A key for the separation of the Australian species of Carvaka is provided. The Australian fauna represents all three recognised species groups of the genus. The significance of this to the biogeographical origins of the Australian fauna is discussed.     

Phylogeny and biogeography of the genus Lycium (Solanaceae): inferences from chloroplast DNA sequences

Lycium comprises approximately 70 species and is disjunctly distributed in temperate to subtropical regions in South America, North America, southern Africa, Eurasia, and Australia. Among them, only Lycium sandwicense A. Gray sporadically occurs widely on oceanic islands in the Pacific Ocean. To investigate phylogenetic and biogeographic relationships of the genus with emphasis on L. sandwicense, the coding region of matK, the two intergenic spacers trnT (UGU)-trnL (UAA) and trnL (UAA)-trnF (GAA), and the trnL (UAA) intron of chloroplast DNA (cpDNA) were sequenced. A strict consensus tree resulting from the phylogenetic analysis indicates the following: (1) New World species comprise a potentially paraphyletic assemblage; (2) southern African, Australian, and Eurasian species together are monophyletic; (3) southern African species are a paraphyletic assemblage; and (4) L. sandwicense is in a clade with certain New World species. The estimated biogeographic events based on the cpDNA analysis indicate that (1) Lycium originated in the New World, (2) all southern African, Australian, and Eurasian species have a common ancestor from the New World, (3) Australian and Eurasian species originated once from a southern African progenitor, and (4) L. sandwicense differentiated from the New World species.     

Plant hosts and parasitoid associations of leaf mining flies (Diptera: Agromyzidae) in the Canberra region of Australia

Abstract  Many leaf mining flies (Diptera: Agromyzidae) are important economic pests of agricultural crops and ornamental plants, and species-rich hymenopteran parasitoid complexes are important in their control. Australian agromyzids are poorly studied, and little is known about their host plants, ecology or natural enemies. We surveyed native and naturalised species of leaf mining flies in Tallaganda National Park, New South Wales and the Australian Capital Territory. Malaise and emergence trapping in Tallaganda yielded 70 agromyzid specimens from six species in four genera: Cerodontha Rondani, Liriomyza Mik, Phytoliriomyza Hendel and Phytomyza Fallen. Of the six species collected, three are Australasian species, two are naturalised species introduced from Europe and one could not be determined to species. The Australian Cerodontha ( Cerodontha ) milleri Spencer represented most of the individuals caught in both Malaise and emergence traps. A total of 163 agromyzid and 98 parasitic wasp specimens were reared from plant samples with agromyzid mines in the Canberra region. Most agromyzids and parasitoids were reared from the weed Sonchus oleraceus L. (Asteraceae). All the agromyzids reared belonged to two introduced species of the genera Phytomyza and Chromatomyia Hardy. The biodiversity of parasitic wasps reared was high with 14 species from seven genera and three families. Hemiptarsenus varicornis (Girault) (Eulophidae), a widespread Old World agromyzid parasitoid, was the most numerous parasitoid reared in our survey.     

A bicontinental origin of polyploid Australian/New Zealand Lepidium species (Brassicaceae)? Evidence from genomic in situ hybridization

Background and Aims

Incongruence between chloroplast and nuclear DNA phylogenies, and single additive nucleotide positions in internal transcribed spacer (ITS) sequences of polyploid Australian/New Zealand (NZ) Lepidium species have been used to suggest a bicontinental hybrid origin. This pattern was explained by two trans-oceanic dispersals of Lepidium species from California and Africa and subsequent hybridization followed by homogenization of the ribosomal DNA sequence either to the Californian (C-clade) or to the African ITS-type (A-clade) in two different ITS-lineages of Australian/NZ Lepidium polyploids.

Methods

Genomic in situ hybridization (GISH) was used to unravel the genomic origin of polyploid Australian/NZ Lepidium species. Fluorescence in situ hybridization (FISH) with ribosomal DNA (rDNA) probes was applied to test the purported ITS evolution, and to facilitate chromosome counting in high-numbered polyploids.

Key Results

In Australian/NZ A-clade Lepidium polyploids, GISH identified African and Australian/NZ C-clade species as putative ancestral genomes. Neither the African nor the Californian genome were detected in Australian/NZ C-clade species and the Californian genome was not detected in Australian/NZ A-clade species. Five of the eight polyploid species (from 7x to 11x) displayed a diploid-like set of rDNA loci. Even the undecaploid species Lepidium muelleriferdinandi (2n = 11x = 88) showed only one pair of each rDNA repeat. In A-clade allopolyploids, in situ rDNA localization combined with GISH corroborated the presence of the African ITS-type.

Conclusions

The nuclear genomes of African and Australian/NZ C-clade species were detected by GISH in allopolyploid Australian/NZ Lepidium species of the A-clade, supporting their hybrid origin. The presumed hybrid origin of Australian/NZ C-clade taxa could not be confirmed. Hence, it is assumed that Californian ancestral taxa experienced rapid radiation in Australia/NZ into extant C-clade polyploid taxa followed by hybridization with African species. As a result, A-clade allopolyploid Lepidium species share the Californian chloroplast type and the African ITS-type with the C-clade Australian/NZ polyploid and African diploid species, respectively.Key words: Lepidium, Brassicaceae, FISH, GISH, hybridization, polyploidy, long-distance dispersal, ITS, rDNA, Australia, New Zealand     

The corneal epithelial surface in the eyes of vertebrates: environmental and evolutionary influences on structure and function

The smooth optical surface of the cornea is maintained by a tear film, which adheres to a variety of microprojections. These microprojections increase the cell surface area and are thought to improve the movement of oxygen, nutrients, and metabolic products across the outer cell membranes. However, little is known of these structural adaptations in vertebrates inhabiting different environments. This field emission scanning electron microscopic study examined the cell density and surface structure of corneal epithelial cells across 51 representative species of all vertebrate classes from a large range of habitats (aquatic, amphibious, terrestrial, and aerial). In particular, we wished to extend the range of vertebrates to include agnathans and some uniquely Australian species, such as the Australian lungfish (Neoceratodus forsteri), the Australian galah (Eolophus roseicapillus), the Australian koala (Phascolarctos cinereus), and the rat-tailed dunnart (Sminthopsis crassicaudata). Epithelial cell densities ranged from 28,860 +/- 9,214 cells mm(-2) in the flathead sole Hippoglossoides elassodon (a marine teleost) to 2,126 +/- 713 cells mm(-2) in the Australian koala (a terrestrial mammal), which may indicate a reduction in osmotic stress across the corneal surface. A similar reduction in cell density occurred from marine to estuarine to freshwater species. The structure and occurrence of microholes, microplicae, microridges, and microvilli are also described with respect to the demands placed on the cornea in different environments. All species that spend significant periods out of an aquatic environment possess microvilli and/or microplicae. These include all of our species of Mammalia, Aves, Reptilia, Amphibia, and even one species of Teleostei (Australian lungfish). Well-developed microridges occur only in teleosts in high osmolarity environments such as marine or estuarine habitats. Clear interspecific differences in corneal surface structure suggest a degree of adaptive plasticity, in addition to some phylogenetic trends.     

Stomatal types of the genus Acacia (Fabaceae, Mimosoideae): an appraisal of diversity and taxonomic interest

The stomatal types of 102 species illustrating the different subdivisions of Bentham's classification of the genus Acacia were studied at two or three ontogenetic stages: first pinnate leaf to bipinnate leaves or to phyllode. Six stomatal types are recognized on the basis of Guyot's nomenclature (1966): 1, 2, 3, 4, 4', 6; a new type (3') is described. The specialization of the leaf up to the phyllode stage is followed by a decrease of diversity of the stomatal formula and an increasing frequency of the 'basic core' 3, 3', 4. The distinction between the two Australian groups of bipinnate species (series Pulchellae and Botrycephalae) is confirmed. Possible relationships between the cosmopolitan series Vulgares (the most primitive group) and some Australian taxa as well as between the Pulchellae and some phyllodic species from the Australian series Phyllodineae are commented on. The series Gummiferae looks quite distinct from other groups.     

Review of the Australian aphrophorid spittlebugs (Hemiptera: Aphrophoridae)

Abstract A review of the Aphrophoridae (Hemiptera: Auchenorrhyncha: Cercopoidea) occurring in Australia has revealed closer links between the Australian fauna and those of the Pacific region than were previously acknowledged. A key to the Australian genera is provided along with a diagnosis for each genus and a list of described Australian species with notes on each. Taxonomic changes proposed are: Neoaphrophora China synonymised with Anyllis Kirkaldy; Eurycercopis Kirkaldy synonymised with Interocrea Walker; Aphrophora rufiventris Walker and Philagra vittata Metcalf and Horton synonymised with Philagra parva (Donovan). New combinations proposed are: Amarusa australis (Jacobi) (from Eoptyelus ); Anyllis tiegsi (China) (from Neoaphrophora ); Interocrea nigrofasciata (Kirkaldy) (from Eurycercopis ); Interocrea regalis (Lallemand) (from Clovia ); Liorhina loxosema (Hacker) (from Clovia ). To provide a single reference point for the species and, for species described by Hacker (1926) and Jacobi (1928) , to validate apparent holotype intentions by those authors, lectotypes are designated for: Ptyelus homochrous Hacker; Eurycercopis nigrofasciata Kirkaldy; Clovia regalis Lallemand; Clovia loxosema Hacker; Philagra concolor Hacker; Philagra fulvida Hacker; Philagra recurva Jacobi. The probable whereabouts of the type specimen of Philagra parva (Donovan) are discussed. The origin of the holotype of Novaphrophara tasmaniae Lallemand is discussed; the Australian record is almost certainly incorrect.     

Biogeography of Eocene bryozoans from the St Vincent Basin, South Australia

The first extensive and stratigraphically detailed taxonomic study of the Middle to Late Eocene Bryozoa of the St Vincent Basin has identified more than 200 species of Cheilostomata and 50 species of Cyclostomata. There are three biogeographic groups: basin endemic, Australian and global. Two-thirds (116) of the cheilostome species and seven genera are currently considered endemic to this basin. Most species are endemic to Australia and similar to those found in the Oligo-Miocene of Victoria. The Cellariidae are a common component of most Australian Cainozoic deposits, but the species are highly dissimilar, with 13 of the 17 species here being new. The global component indicates that biogeographic links with regions outside Australia still existed in the Eocene. The cyclostome genus Reticrescis is only known from the Australian and Antarctic Eocene. Ten genera have their first occurrence in the Eocene St Vincent Basin. The Phidoloporidae and Smittinidae represent the most diverse and ubiquitous groups at a geological time close to their time of origination. Contemporaneous sediments in Antarctica, eastern Europe and North America also have a diverse fauna of this family, pointing to a strong Tethyan link. Rhamphosmittina lateralis (MacGillivray) is still extant in New Zealand, having an exceptionally long time range of 40 million years. Overall, the fauna has a distinct Late Cretaceous character. A new genus of Onychocellidae appears similar to genera that were common in Cretaceous Tethyan faunas but rare during the Cainozoic. This similarity ends in the Oligocene, after which the Australian bryozoan became endemic