Direct measurement of roots in soil for single and mixed species using a quantitative DNA-based method

Molecular techniques present a new opportunity to study roots and their interactions in soil. Extraction and quantification of species-specific DNA directly from soil allows direct identification of roots in mixed swards reducing the need for labour-intensive methods to recover and identify individual roots. DNA was extracted directly from up to 0.5 kg of soil and the presence of individual species quantified using species-specific probes with quantitative real-time PCR. A range of plant and soil factors influenced the DNA content measured in roots and it was necessary to account for these influences when converting DNA amount to root mass. The utility of the method for quantitative root studies was demonstrated in an experiment to investigate the effect of lime on root growth of acid-soil resistant and sensitive perennial grasses grown together in an aluminium-toxic soil. The root mass of an acid-soil resistant species was unaffected by lime application, whereas that of an acid-soil sensitive species was restricted by soil acidity. Molecular techniques present a promising tool for quantification of root mass directly in soil and have applications for field studies involving mixed species of plants.     

Field application of a DNA-based assay to the measurement of roots of perennial grasses

Background and aims

DNA-based methods present new opportunities for overcoming the difficulties of accurately identifying and quantifying roots of different plant species in field soils. In order to quantify species-specific root biomass from measurements of DNA, consideration needs to be given to replication and ability to recover roots for calibration purposes in order to account for spatial, temporal and inter- and intra-species variation in DNA content of roots and distribution of roots within the soil profile.

Methods

This paper develops the field application of a DNA-based technique for direct quantification of roots in soils. The method was applied to a field experiment to investigate differences in root growth of acid-soil resistant and sensitive genotypes of perennial pasture grasses in an acid soil. DNA was extracted directly from soil and species-specific DNA was quantified using quantitative real-time PCR prior to estimation of root biomass.

Results

Root growth of the perennial grasses was quantified using the DNA-based technique, although separate calibration procedures were needed to convert DNA content to root mass for each species, soil layer and sampling date. Compared to acid-soil resistant genotypes, lesser root growth in acid soil layers and reduced above-ground dry matter production was observed for acid-soil sensitive genotypes.

Conclusions

The DNA-based method allowed genotypic differences in root growth to be assessed directly in soil and was advantageous for rapid processing of a large number of samples. However, high replication was still required to overcome spatial variability and separate calibrations were required for different species and soil depths across sampling times. The technique demonstrated greater root growth of acid-soil resistant perennial grasses which was beneficial for their establishment and persistence.     

Interspecific differences in root architecture among maize and triticale genotypes grown under drought,waterlogging and soil compaction

Environmental stresses (soil compaction, drought, waterlogging) cause changes in plants’ root system structure, also affecting the growth of above-ground parts. The aim of this study was to estimate phenotypic variation among maize and triticale genotypes in root penetration ability through petrolatum-wax-layer (RPA). Also, the effect of shortage or excess of soil water on dry matter of shoots and roots and morphological changes in root system structure in sensitive and resistant maize and triticale genotypes grown in low or high soil compaction level was evaluated. To estimate RPA index, the petrolatum-wax-layer method (PWL) was used. The strength of three petrolatum-wax concentrations 60, 50 and 40 % was 0.52, 1.07 and 1.58 MPa, respectively. High coefficients of variation (CV) were observed in 0.52 and 1.07 MPa and for maize were 19.2 and 21.7 %, and for triticale, 12.5 and 18.3 %, respectively. The data indicate that the use of PWL technique is an effective screening method, and makes it possible to divide the genotypes into resistant and sensitive groups. The second part of this study investigated a multistress effect of soil compaction combined with drought or waterlogging on root and shoot growth and morphological changes in root system structure of maize and triticale genotypes differing in susceptibility to environmental stresses. Seedlings were grown for 4 weeks in root-boxes under conditions of low (LSC 1.1 g cm^?3) or severe (SSC 1.6 g cm^?3) soil compaction. Drought or waterlogging stresses were applied for 2 weeks from 14th to 28th day. In comparison to LSC treatment, in SSC treatment the decrease in dry matter of shoots and roots was greater for sensitive genotypes of maize and triticale (Ancora, CHD-147). Soil drought or waterlogging caused greater decrease of dry matter of shoots and roots in seedlings grown in SSC in comparison to LSC. The root penetration index (RPI) was estimated as a ratio of root dry matter in 15–40 cm root-box layer to total root dry matter. On the basis of RPI it was possible to group the genotypes according to their ability to distribute roots in soil profile. In comparison to LSC, SSC exerted a strong influence on the length of seminal and seminal adventitious roots, as well as the number and length of L- and S-type lateral roots developed on seminal and nodal roots. In both species the restriction effect of soil compaction on number and length of roots was more severe in sensitive (Ankora, CHD-147) than in resistant (Tina, CHD-247) genotypes. The restriction in roots propagation was greater in triticale than in maize. Exposure to drought or waterlogging in the case of genotypes grown in LSC and SSC treatments caused a decrease in number and length of particular components of root system structure. In both species the decrease of root number and length in plants grown under waterlogging was greater than under drought. The observed changes in root system were greater in sensitive (Ankora, CHD147) than in resistant (Tina, CHD-247) genotypes. Statistically significant correlations were found between RPA and RPI and also between these indexes and soil compaction, drought and waterlogging susceptibility indexes. This indicates that genotypes resistant to soil compaction were resistant to drought or waterlogging and also that genotypes resistant to drought were resistant to waterlogging.     

Growth and morphology of eucalypt seedling-roots, in relation to soil strength arising from compaction

Information on the response of root growth and morphology to soil strength is useful for testing suitability of existing and new tillage methods and/or for selecting plants suitable for a specific site with or without tillage. Although there is extensive published information on the root growth-soil strength relationships for annual agricultural plants, such information is scarce for woody, perennial tree species. The purpose of this study is to examine growth and morphology of the root systems of 17-day-old eucalypt seedlings with respect to variation in soil strength. Soil strength in this study was varied by compaction of a well-aggregated clay soil to bulk densities of 0.7–1.0 Mg m^-3 whilst maintaining adequate water availability and aeration for plant growth. Lengths and tip-diameters of primary and lateral roots were measured on the excavated root systems of seedlings.With increase in bulk density and also soil strength (expressed as penetrometer resistance), total length of primary and lateral roots decreased. There were 71 and 31% reduction in the lengths of primary and lateral roots respectively with an increase in penetrometer resistance from 0.4 to 4.2 MPa. This indicated primary roots to be more sensitive to high soil strength than the lateral roots. Average length of lateral roots and diameters of both primary and lateral root tips increased with an increase in soil strength as well. There was greater abundance of lateral roots (no. of lateral roots per unit length of primary root) and root hairs with increased soil strength. The observed root behaviour to variable soil strength is discussed in the context of compensatory growth of roots and overall growth of plants.     

Nutrient uptake estimates for woody species as described by the NST 3.0, SSAND, and PCATS mechanistic nutrient uptake models

The effect of soil acidity on root and rhizosheath development in wheat and barley seedlings was investigated in an acid Ferrosol soil to which various amounts of lime (CaCO₃) were applied to modify soil Al concentrations (pH (CaCl₂): 4.22 to 5.35 and Al (CaCl₂ extract): 17.7 to 0.4 mg kg^?1 soil; respectively), and Ferrosol soil from an adjacent location at the same site which had a higher Al concentration (pH 4.19; 29.2 mg kg^?1 Al). The cereal lines were selected on the basis of differences in their rate of root growth, Al-resistance and root hair morphology. Root morphology was assessed after 7 days of growth. The length of fine (mainly lateral) roots of Al-sensitive genotypes was more sensitive to soil Al concentrations than that of the coarse (mainly primary) roots. The experiments demonstrated that even where root growth was protected by expression of the TaALMT1 gene for Al-resistance, root-soil contact was diminished by soil acidity because root hair length (in many lines), and root hair density and rhizosheath formation (all lines) were adversely affected by soil acidity. In the case of Al-sensitive lines, fine root growth and rhizosheath mass were reduced over much the same range of soil Al concentrations (i.e. >3–6 mg kg^?1 Al). Although Al-resistant lines could maintain fine root length under these conditions, they were similarly unable to maintain rhizosheath mass. This finding may help to explain why Al-resistant wheats which yield relatively well in deep acid soils, may also benefit from application of lime to the surface layers of the soil.     

Root hair length and rhizosheath mass depend on soil porosity,strength and water content in barley genotypes

Selecting plants with improved root hair growth is a key strategy for improving phosphorus-uptake efficiency in agriculture. While significant inter- and intra-specific variation is reported for root hair length, it is not known whether these phenotypic differences are exhibited under conditions that are known to affect root hair elongation. This work investigates the effect of soil strength, soil water content (SWC) and soil particle size (SPS) on the root hair length of different root hair genotypes of barley. The root hair and rhizosheath development of five root hair genotypes of barley (Hordeum vulgare L.) was compared in soils with penetrometer resistances ranging from 0.03 to 4.45 MPa (dry bulk densities 1.2–1.7 g cm^?3). A “short” (SRH) and “long” root hair (LRH) genotype was selected to further investigate whether differentiation of these genotypes was related to SWC or SPS when grown in washed graded sand. In low-strength soil (<1.43 MPa), root hairs of the LRH genotype were on average 25 % longer than that of the SRH genotype. In high-strength soil, root hair length of the LRH genotype was shorter than that in low-strength soil and did not differ from that of the SRH genotype. Root hairs were shorter in wetter soils or soils with smaller particles, and again SRH and LRH did not differ in hair length. Longer root hairs were generally, but not always, associated with larger rhizosheaths, suggesting that mucilage adhesion was also important. The root hair growth of barley was found to be highly responsive to soil properties and this impacted on the expression of phenotypic differences in root hair length. While root hairs are an important trait for phosphorus acquisition in dense soils, the results highlight the importance of selecting multiple and potentially robust root traits to improve resource acquisition in agricultural systems.     

Hydraulic properties of sphagnum peat moss and tuff (scoria) and their potential effects on water availability

The importance of macrostructure to root growth of ryegrass (L. perenne) seedlings sown on the soil surface was studied in two soils in which the macrostructure had resulted mainly from root growth and macro-faunal activity. Sets of paired soil cores were used, one of each pair undisturbed and the other ground and repacked to the field bulk density. Undisturbed and repacked soils were first compared at equal water potentials in the range −1.9 to −300 kPa. At equal water potential, the undisturbed soil always had the greater strength (penetration resistance), and root growth was always greater in the repacked soil with no macrostructure than it was in the soil with macrostructure intact. At equal high strength (low water potentials) it appeared that root growth was better when soils were structured. When strength was low (high water potentials), root growth was better in the unstructured soil. Soils were then compared during drying cycles over 21 days. The average rate at which roots grew to a depth of 60 mm, and also the final percentage of plants with a root reaching 60 mm depth, was greatest in repacked soils without macrostructure. The species of vegetation growing in the soil before the experiment affected root growth in undisturbed soil; growth was slower where annual grasses and white clover had grown compared with soil which had supported a perennial grass. It appears that relatively few roots locate and grow in the macrostructure. Other roots grow in the matrix, if it is soft enough to be deformed by roots. Roots in the matrix of a structured soil grow more slowly than roots in structureless soil of equal bulk density and water potential. The development of macrostructure in an otherwise structureless soil, of the type studied, is of no advantage to most roots. However, once a macrostructure has developed, the few roots locating suitable macropores are able to grow at low water potential when soil strength is high. The importance of macrostructure to establishing seedlings in the field lies in rapid penetration of at least a few roots to a depth that escapes surface drying during seasonal drought. ei]{gnB E}{fnClothier}     

Growth,radicle and root hair development ofDeschampsia flexuosa (L.) Trin. seedlings in relation to soil acidity

Deschampsia flexuosa (L.) Trin. is an abundant grass species in the ground flora of acidic beech forests in southern Sweden. Generally, the species is restricted to a limited soil pH range (pH 4–5). The main objective was to study the influence of different soil acidities on germination, initial root development and on the growth of the species. The experiments were carried out under controlled conditions and designed to simulate the physico-chemical conditions present in the field. By using forest soils within the pH range 4.0 to 8.3 and artificial variation in pH (3.2 to 7.6) of soil-water extracts, it was possible to evaluate the influence of soil reaction and the H⁺ per se. In all experiments seeds have been used. Germination was significantly delayed in the very acid soil (pH 4.0) in comparison to the germination in soils within the pH range (4.4 to 6.4). Soil substances, other than the H⁺, might be responsible for this delay in germination, whereas development of the radicle was markedly affected by increasing H⁺ concentrations. Especially the development of root hairs was sensitive to H⁺ and was significantly reduced at a pH<-3.8. By increasing soil acidity the injury symptoms, including curling and discolouring, became more intense and at the highest acidity (pH 3.2) the radicles appeared brown, stunted and the root hairs were lacking. Most favourable growth was obtained at pH 4.4 and 5.0. Soil pH levels above and below this range limited both shoot and root growth. The results showed very good correspondence with observations made in Beech forest soils in southern Sweden, where the species was growing in soils within the pH range 3.9 to 5.1 with a peak growth at pH 4.3. This study shows that in soils at pH≤3.8, the poor development of the radicle may be crucial in the establishment ofDeschampsia flexuosa. Root hair development was more sensitive to soil acidity than radicle elongation. Germination was delayed in very acid Beech forest soils but other factors than the H-ion per se may be responsible for this delay.     

The effect of soil strength on the growth of pigeonpea radicles and seedlings

The effect of soil strength on the growth of pigeonpea radicles and seedlings was investigated in cores of three clay soils prepared at different water contents and bulk densities in the laboratory.Radicle elongation directly into soil cores was reduced from 50–70 mm d^-1 at strengths less than 0.5 MPa to 0 mm d^-1 at 3.5–3.7 MPa. The response to soil strength was affected by the water content of the soil, presumably as a result of reduced oxygen availability in wetter soil. This effect was apparent in soils wet to air-filled porosities less than 0.15 m³ m^-3.Radicles were more sensitive to high soil strength (>1.5 MPa) than were seedling roots which encountered the same conditions at 60 mm in the profile. Radicle growth ceased at 3.5 MPa which reduced seedling root growth by only 60%.Despite a 60% reduction in root length in the high strength zone, seedling roots compensated in zones of loose soil above and below the compacted layer, and total root length and shoot growth were unaffected. There was no evidence of a root signal response which results in reduced shoot growth in some species in response to high soil strength.The proliferation of roots in surface layers and the delayed penetration of the root system to depth in compacted soil are likely to expose seedlings to a greater risk of water-deficit in the field, particularly under dryland conditions where plants rely on stored subsoil water for growth.     

Early growth of Brazilian pine (Araucaria angustifolia[Bertol.] Kuntze) in response to soil compaction and drought

Soil compaction leads to changes in soil physical properties such as density, penetration resistance and porosity, and, by consequence, affects root and plant growth. The initial growth of Brazilian pine is considered as being more affected by soil physical than chemical conditions, and the presence of a well-developed tap root system has been associated with this fact. A greenhouse experiment was conducted in order to evaluate the impact of soil compaction on the growth of Brazilian pine seedlings and on their susceptibility to a simulated drought period. In the first phase of the experiment, the effects of three levels of soil compaction on root morphology and plant growth were examined. Soil cylinders were artificially compacted in PVC tubes. Pre-germinated seeds were planted, and 147 days later 10 plants from each treatment were harvested for analysis. Higher values of soil density were associated with a shorter and thicker tap root. Growth of lateral roots and shoots remained unaffected at this stage. In the second phase, half of the plants (12) in each compaction treatment were drought-stressed by withholding water for a period of 77 days. Increased soil compaction again resulted in reduced length and increased diameter of the main tap root. This time, the effects were also extended to the lateral roots. Shoot extension growth and overall plant mass, however, increased with soil compaction. This greater mass accumulation in plants growing under increased soil compaction may be attributed to a more intimate contact between roots and soil particles. Drought stress reduced both root and shoot growth, but root mass was more negatively affected by drought stress in plants growing under high levels of soil compaction. Future investigations on the effects of soil compaction on the initial growth of Brazilian pine should include a wider range of compaction levels to better establish the relationship between soil physical parameters and plant growth.     

Additive, dominant, and epistatic effects for maize grain yield in acid and non-acid soils

Acid soils severely reduce maize (Zea mays L.) yield in the tropics. Breeding for tolerance to soil acidity provides a permanent, environmentally friendly, and inexpensive solution to the problem. This study was carried out to determine the relative importance of additive, dominant, and epistatic effects on maize grain-yields in different tropical genotypes. Divergent selection in three populations (SA4, SA5, and SA7) provided inbred lines tolerant or sensitive to acid soils. The tolerant and sensitive lines from each population were used to obtain the F₁, F₂, F₃, back-crosses, second back-crosses, and selfed back-cross generations. In addition, the tolerant lines from SA4 and SA5 were crossed with a sensitive line from the Tuxpeño Sequía population, from which the same generations were also derived. All generations from each of the five sets of crosses were evaluated in three acid-soil environments and one non-acid-soil environment. A generation-mean analysis was performed on each set for yield. The sequential sum of squares associated with additive, dominance, and digenic epistatic effects were used to estimate the relative importance of each genetic effect. Epistasis was not important in any set in the non-acid-soil environment, with dominance accounting for 80.76% of the total variation among generation means across sets. In acid-soil environments, epistasis was more important. The relative importance of digenic epistasis was greater in those evaluations with large experimental errors. The tolerant line from population SA5 was prone to severe root lodging, suggesting a very poor root system. Apparently, the tolerance to soil acidity in this line is not associated with a large root system.     

Investigations into the exploitation of heterogeneous soils by Lupinus albus L. and L. pilosus Murr. and the effect upon plant growth

In calcareous soils, genotypes of Lupinus albus L. generally grow poorly, resulting in stunted plants that often develop lime-induced chlorosis. In contrast, some genotypes of L. pilosus Murr. occur naturally in calcareous soils without developing any visible symptoms of stress. Some genotypic variation for tolerance to calcareous soil does exist in L. albus and the tolerance mechanisms need to be determined. The adaptation through root system morphological plasticity of L. albus and L. pilosus, to heterogeneous limed soil profiles (pH 7.8) containing either patches of acid (non-limed) soil, or vertically split between acid and limed soil, was investigated. When grown in the presence of patches of acid soil, L. albus had a 52% greater shoot dry weight and visibly greener leaves compared with plants grown in the homogeneous limed soil. Total root dry matter in the acid-soil patches was greater than in the control limed-soil patches. This was due to a four-fold increase in the cluster root mass, accounting for 95% of the root dry matter in the acid-soil patch. Although these cluster roots secreted no more citric acid per unit mass than those in the limed soil did, their greater mass resulted in a higher citrate concentration in the surrounding soil. L. pilosus responded to the patches of acid soil in a manner comparable with L. albus. When grown in the homogeneous limed soil, L. pilosus had a greater maximum net CO₂ assimilation rate (P_max) than L. albus, however, the P_max of both species increased after they had accessed a patch of acid soil. Differences were apparent between the L. albus genotypes grown in soil profiles split vertically into limed and acid soil. A genotype by soil interaction occurred in the partitioning between soils of the cluster roots. The genotype La 674 was comparable with L. pilosus and produced over 11% of its cluster roots in the limed soil, whereas the other genotypes produced only 1–3% of their cluster roots in the limed soil. These results indicate L. pilosus is better adapted to the limed soil than L. albus, but that both species respond to a heterogeneous soil by producing mainly cluster roots in an acid-soil patch. This revised version was published online in June 2006 with corrections to the Cover Date.     

Microbiological and chemical properties of soil associated with macropores at different depths in a red-duplex soil in NSW Australia

Some agricultural soils in South Eastern Australia with duplex profiles have subsoils with high bulk density, which may limit root penetration, water uptake and crop yield. In these soils, a large proportion (up to 80%) of plant roots maybe preferentially located within the macropores or in the soil within 1–10 mm of the macropores, a zone defined as the macropore sheath (MPS). The chemical and microbiological properties of MPS soil manually dissected from a 1–3 mm wide region surrounding the macropores was compared with that of adjacent bulk soil (>10 mm from macropores) at 4 soil depths (0–20 cm, 20–40 cm, 40–60 cm and 60–80 cm). Compared to the bulk soil, the MPS soil had higher organic C, total N, bicarbonate-extractable P, Ca⁺, Cu, Fe and Mn and supported higher populations of bacteria, fungi, actinomycetes, Pseudomonas spp., Bacillus spp., cellulolytic bacteria, cellulolytic fungi, nitrifying bacteria and the root pathogen Pythium.In addition, analysis of carbon substrate utilization patterns showed the microbial community associated with the MPS soil to have higher metabolic activity and greater functional diversity than the microbial community associated with the bulk soil at all soil depths. Phospholipid fatty acids associated with bacteria and fungi were also shown to be present in higher relative amounts in the MPS soil compared to the bulk soil. Whilst populations of microbial functional groups in the MPS and the bulk soil declined with increasing soil depth, the differentiation between the two soils in microbiological properties occurred at all soil depths. Soil aggregates (< 0.5 mm diameter) associated with plant roots located within macropores were found to support a microbial community that was quantitatively and functionally different to that in the MPS soil and the bulk soil at all soil depths. The microbial community associated with these soil aggregates thus represented a third recognizable environment for plant roots and microorganisms in the subsoil.     

Root elongation is restricted by axial but not by radial pressures: so what happens in field soil?

Root distribution determines largely the zone of soil that roots have access to for water and nutrient uptake, and is of great importance especially if water and fertilizer input is restricted. Mechanical impedance is the major limitation to root elongation in many field soils. Until now, experiments have focused largely on the axial resistance to root growth. In a fascinating study of the radial forces exerted by the roots of chickpea, root extension, diameter change, and the radial forces that axially unimpeded roots exert are reported: Kolb et al. (this volume) record radial stresses of about 0.3?MPa that are broadly consistent with cell turgor pressures, but, interestingly, find no restriction to axial elongation. This result is in marked contrast to large decreases in elongation of pea radicles resulting from much smaller axial pressures reported elsewhere in the literature (e.g., an 85?% decrease in root elongation in response to axial pressures of?<?0.1?MPa). The situation is different also from that in homogeneous soil, where root penetration resistance pressures of 0.4-1.0?MPa are typically required to halt root elongation. Soil structure and strength properties will determine the balance of axial and radial pressures on an individual root tip, and hence the root elongation response. It appears that a degree of radial confinement may help roots to extend axially into hard soil. This result also complements recent findings that in strong field soils the availability of soil macropores has a large influence on regulating the root-elongation rates of seedlings.     

Growth response to subsurface soil acidity of wheat genotypes differing in aluminium tolerance

Subsurface soil acidity coupled with high levels of toxic Al is a major limiting factor in wheat production in many areas of the world. This study examined the effect of subsurface soil acidity on the growth and yield of two near-isogenic wheat genotypes differing in Al tolerance at a single genetic locus in reconstructed soil columns. In one experiment, plants were grown in columns with limed topsoil and limed or acidic subsurface soils, and received water only to the subsurface soil at a late part of the growth period. While shoot dry weight, ear number and grain yield of Al-tolerant genotype (ET8) were not affected by subsurface soil acidity, liming subsurface soil increased shoot weight and grain yield of Al-sensitive genotype (ES8) by 60% and ear number by 32%. Similarly, root length density of ET8 was the same in the limed and acidic subsurface soils, while the root length density of ES8 in the acidic subsurface soil was only half of that in the limed subsurface soil. In another experiment, plants were grown with limed topsoil and acidic subsurface soil under two watering regimes. Both genotypes supplied with water throughout the soil column produced almost twice the dry weight of those receiving water only in the subsurface soil. The tolerant genotype ET8 had shoot biomass and grain yield one-third higher than ES8 when supplied with water throughout the whole column, and had yield 11% higher when receiving water in the subsurface soil only. The tolerant genotype ET8 produced more than five times the root length in the acidic subsurface soil compared to ES8. Irrespective of watering regime, the amount of water added to maintain field capacity of the soil was up to 2-fold higher under ET8 than under ES8. The results suggest that the genotypic variation in growth and yield of wheat grown with subsurface soil acidity results from the difference in root proliferation in the subsurface soil and hence in utilizing nutrient and water reserves in the subsurface soil layer.     

Assessment of a rapid method,using soil cores,for estimating the amount and distribution of crop roots in the field

Summary A study was made of the relationship between the number of roots (N_r) observed on unit area of the freshly exposed, horizontal faces of soil cores, and the amounts of roots (per unit volume) present in the same cores. Soil cores, 7 cm diameter, were extracted to depths of 1 m from cereal crops in 1976 at three field sites located on clay soils. Sampling was either at the start of stem elongation, or at anthesis. Estimates of root length per unit soil volume (L) were derived from N_r by assuming random orientation of roots in the soil.Values of L were found to be highly correlated with the measured lengths of both the main roots (root axes) and the total roots (axes and laterals) washed from the soil at a given growth stage, for each of the soils. On average, L was 3.3 times the length of root axes washed from the soil, and was 0.42 times the length of total roots, but there was appreciable variation between different growth stages and field sites. Possible factors giving rise to differences between L and the measured lengths of roots are discussed. Estimates of root length from observation of soil cores may nonetheless provide a suitable basis for rapidly comparing therelative distribution of roots down the soil profile under field conditions.     

The formation,morphology and anatomy of cluster root of Lupinus albus L. as dependent on soil type and phosphorus supply

The effect of phosphorus supply on the formation, morphology and anatomy of cluster roots of Lupinus albus L. cv Ultra grown in a loam and two sandy soils was examined relative to its effect on total root length, shoot weight and the phosphorus concentration of the shoots. The loam soil was most conducive to the formation of cluster roots. Cluster roots growing in the sandy soils developed to a lesser extent on plants of an equivalent phosphorus status, suggesting that some biotic or abiotic factors independent of phosphorus supply were also operating. The presence of mature cluster rootlets on a length of lateral root increased the root surface area by 14–22 times of an equal length of lateral roots not bearing cluster rootlets. The application of phosphorus decreased cluster-root length, whereas total root length showed a steady increase. There was an inverse relationship between cluster-root production and phosphorus concentration in shoots ranging from 2 to 8.5 mg g^–1 with the critical phosphorus level for maximum shoot growth being around 2.5 mg g^–1. Cluster roots formed in solution culture were not well developed in comparison with those grown in the loam soil or nutrient solution with added loam soil. The organisation of the cluster rootlet was similar to that of the lateral roots. Mature rootlets lacked an apical meristem and a vascular cambium with a reduced root cap and cortical tissue.     

Macropore sheath: quantification of plant root and soil macropore association

Plants require roots to supply water, nutrients and oxygen for growth. The spatial distribution of roots in relation to the macropore structure of the soil in which they are growing influences how effective they are at accessing these resources. A method for quantifying root-macropore associations from horizontal soil sections is illustrated using two black vertisols from the Darling Downs, Queensland, Australia. Two-dimensional digital images were obtained of the macropore structure and root distribution for an area 55 × 55 mm at a resolution of 64 μm. The spatial distribution of roots was quantified over a range of distances using the K-function. In all specimens, roots were shown to be clustered at short distances (1–10 mm) becoming more random at longer distances. Root location in relation to macropores was estimated using the function describing the distance of each root to the nearest macropore. From this function, a summary variable, termed the macropore sheath, was defined. The macropore sheath is the distance from macropores within which 80% of roots are located. Measured root locations were compared to random simulations of root distribution to establish if there was a preferential association between roots and macropores. More roots were found in and around macropores than expected at random. This revised version was published online in June 2006 with corrections to the Cover Date.     

Diffusion of phosphate to plant roots in soil

Summary Autoradiographs of rape (Brassica napus L.) seedlings growing in a Begbroke Sandy Loam treated to different P levels showed P accumulations near root apices of primary and lateral roots, without corresponding depletion from the adjacent soil, indicating marked translocation.Laterals less than 2 days old did not deplete the soil despite considerable P accumulations in them. Their growth and P uptake were enhanced when the growth of the primary root was checked. The length of root hairs decreased markedly with increasing P supply.The P depletion zones developed in the same way at all points along the primary axis (except for a short length behind the apex). At the highest P level the concentration of exchangeable P at the root surface was lowered by about 30% on day 2, by about 40% on day 4 and rose slowly after day 8.Whereas in P treated soils the depletion from within the root hair cylinder was fairly uniform, in the low P soil there was a continuous decrease in P concentrations toward the root surface, within the root hair zone.Soil Science Laboratory, Department of Agricultural Science, University of Oxford     

Acid soil damage in sorghum genotypes: Role of magnesium deficiency and root impairment

The effects of liming and Mg fertilization on growth, specific root length (root length per unit of root dry weight; SRL) and nutrient uptake of twelve sorghum genotypes (Sorghum bicolor (L.) Moench) were studied in two pot experiments. Liming increased the pH of the sandy loam from pH 4.3 (unlimed) to 4.7 (with 0.5 g Ca(OH)₂ kg^-1 soil) and to 6.1 (with 2.5 g Ca(OH)₂ kg^-1 soil). Liming increased the dry matter yield of the genotypes by factors of 1.2 to 6.0 (between pH 4.3 and 4.7) and by 1.1 to 2.4 (between pH 4.7 and 6.1). In absence of Mg at soil pH of 4.3 and 4.7, all genotypes suffered from Mg deficiency, as indicated by low Mg concentrations in the shoots (26–94 mmol Mg kg^-1 DM) and visible Mg deficiency symptoms. At pH 4.7 several of the genotypes responded to Mg application and produced significantly more dry matter. At pH 4.3, however, none of the genotypes responded to Mg, even though the internal Mg concentrations were increased by applied Mg. The relative increase in dry matter yield between pH 4.3 and 4.7 was closely correlated to the relative change in specific root length in the same soil pH interval, especially when the soil was fertilized with Mg (r²=0.91^**). The group of genotypes where SRL and dry matter yield were reduced by soil acidity was not the same as the group that responded positively to Mg application at pH 4.7.It is concluded that the growth of sorghum genotypes on acid soils is determined by two independent characteristics: the sensitivity of root development to soil acidity and the efficiency of the uptake and utilization of Mg. The first characteristic is predminant at high soil acidity whilst the latter is dominant at moderate soil acidity.