EFFECTS OF METAL AND PETROLEUM HYDROCARBON CONTAMINATION ON BENTHIC DIATOM COMMUNITIES NEAR CASEY STATION,ANTARCTICA: AN EXPERIMENTAL APPROACH1

The effects of metals and petroleum hydrocarbons on benthic marine diatom communities were assessed using a manipulative field experiment at Casey Station, Antarctica. Uncontaminated, metal contaminated, and petroleum hydrocarbon contaminated sediments were deployed for 11 weeks during the 1999 austral summer. The treatments were deployed at three different locations: Brown Bay, which has elevated levels of anthropogenic contaminants, and two uncontaminated reference locations, O'Brien Bay and Sparkes Bay, the latter of which has naturally occurring high concentrations of some heavy metals. At each location, significant differences between the composition of diatom communities recruiting to control and petroleum hydrocarbon contaminated treatments were observed. Navicula directa (Smith) Ralfs occurred at lower abundances in the petroleum hydrocarbon contaminated treatments than in the control treatments. In contrast, Navicula cancellata Donkin occurred at higher relative abundances in both contaminated treatments relative to the control treatment. Interactions between treatment and location were also observed for several species, including Navicula glaciei Van Heurck. Significant differences in the overall community composition of diatom communities between control and metal contaminated treatments and metal contaminated and petroleum hydrocarbon contaminated treatments were only observed within Brown Bay. The location of deployment also had a significant influence on the composition of diatom communities. Brown Bay had higher abundances of Achnanthes brevipes Agardh but lower abundances of Navicula aff. cincta (Ehrenberg) Van Heurck than either reference locations. This experiment demonstrated that benthic diatom communities are sensitive to sediment contamination and would be suitable for future monitoring work within this and other areas of Antarctica.     

Reduced abundance of raptors in radioactively contaminated areas near Chernobyl

The negative ecological effects of radioactive contamination around Chernobyl have recently been suggested to be moderate and declining because of an increasing number of anecdotal observations of several species of rare animals including predators. However, these claims were not based on empirical evidence. Radionuclides show bio-accumulation with trophic level, and the abundance of birds is depressed in radioactively contaminated areas around Chernobyl. Therefore, we predicted that birds of prey should be less abundant with increasing levels of radiation. Here, we use our long-term field data from 1991 to 2007 in three different analyses based on observations of raptors using standardized point counts, censuses during capture of barn swallows Hirundo rustica that habitually give alarm calls when a raptor is present, and line transects while driving on roads. Analyses suggest that the abundance of birds of prey is reduced in contaminated areas, and that there is evidence of a recent increase in abundance of raptors in less contaminated areas, but not in the most contaminated ones. Our findings suggest that birds of prey that are top level consumers in ecosystems suffer from reduced abundance in radioactively contaminated areas.     

The distribution of zinc, cadmium, lead and copper within the hepatopancreas of a woodlouse

The distribution of metals within the hepatopancreas of Oniscus asellus (Crustacea, Isopoda) from two uncontaminated sites, and two sites contaminated with zinc, cadmium and lead, has been studied by atomic absorption spectrophotometry, light microscopy, transmission and scanning electron microscopy and X-ray microanalysis. The hepatopancreas contains two types of intracellular granule. The first type, in the S cells, are spherical granules which contain copper, sulphur and calcium. In woodlice from contaminated sites, these ‘copper’ granules, also contain zinc, cadmium and lead. The second type, in the B cells, are flocculent deposits which contain iron. In woodlice from contaminated sites, these ‘iron’ granules also contain zinc and lead. Moribund woodlice from contaminated sites have large numbers of ‘copper’ and ‘iron’ granules in the hepatopancreas and a fine deposit of zinc and lead on the membranes of the cells. There are numerous microorganisms in close association with the microvillous border of the hepatopancreas of woodlice from all four sites. Within the microorganisms of Oniscus asellus from contaminated sites, there are deposits of material which contain zinc, lead, calcium and phosphorus ‘Copper’ and ‘iron’ granules could have evolved as storage sites for essential metals to be utilized when demand from the body exceeds uptake from the food. Woodlice in contaminated sites may be able to ‘detoxify’ potentially harmful amounts of essential and non-essential metals by storing them in a relatively insoluble form within these granules.     

The occurrence and localisation of heavy metals and glycogen in the earthwormsLumbricus rubellus andDendrobaena rubida from a heavy metal site

Summary The lead content of whole earthworms, highest in contaminated site specimens, was significantly higher inDendrobaena rubida thanLubricus rubellus and a species difference in zinc was also recorded. Selective feeding and differential absorption are discounted and a species difference in maximum tolerance to body lead is suggested. Copper was low in all specimens. Chloragocytes and intestinal tissue showed significantly higher lead levels in contaminated earthworms than in control material. Ultrastructurally, chlorgocytes from contaminated earthworms showed electron dense flecks associated with the chroragosome peripheries and within the debis vesicles. Very fine flecks occurred in the nuclei, but mitochondria and Golgi were indistinguishable from control material. Preliminary X-ray microanalysis of contaminated chloragocytes revealed lead and phosphorus. The deposits within the chloragocytes might represent unbound lead precipitated by phosphate buffer; flecks being absent from contaminated, citrate buffered material and from control material. The chloragosomes are proposed as possible sites for sequestered lead.Chloragocyte and intestinal glycogen levels were significantly higher in control material where the chloragocyte cytoplasm was rich in -glycogen rosettes, these being absent from lead contaminated cells. The glycogen-lead correlation suggests that the metabolism of contaminated chloragocytes is directed towards lead sequestration, though differing nutritional states cannot be ignored.The assistance of Mr. P.M. Webster, University of Keele, is gratefully acknowledged.     

Microwave-Assisted Process (MAPTM) for the Extraction of Contaminants from Soil

Laboratory-scale tests were performed to evaluate the use of Environment Canada's patented Microwave-Assisted Process (MAP_TM) for the extraction of petroleum hydrocarbons from contaminated soil. The purpose of these tests was to determine the potential for using the process for large-scale processing of contaminated soil. Tests were performed using three soil types: a certified sediment and certified soil, both contaminated with polycyclic aromatic hydrocarbons (PAHs), and spiked peat soil contaminated with long-chain petroleum hydrocarbons. The test methods used were based on existing MAP techniques that have been proven for the sample preparation of contaminated soils for analytical purposes. The parameters evaluated concentrated on those that are amenable to a continuous large-scale process running at atmospheric pressures. This meant using solvents that are inexpensive and readily available in large volumes, low solvent to material ratios, and optimized energy inputs. In general, it was found that microwaves could be used to enhance the solvent extraction of the contaminants from the soil and that the properties of the soil greatly affected the extent to which the contaminants were removed.     

Mycobacterium Diversity and Pyrene Mineralization in Petroleum-Contaminated Soils

Degradative strains of fast-growing Mycobacterium spp. are commonly isolated from polycyclic aromatic hydrocarbon (PAH)-contaminated soils. Little is known, however, about the ecology and diversity of indigenous populations of these fast-growing mycobacteria in contaminated environments. In the present study 16S rRNA genes were PCR amplified using Mycobacterium-specific primers and separated by temperature gradient gel electrophoresis (TGGE), and prominent bands were sequenced to compare the indigenous Mycobacterium community structures in four pairs of soil samples taken from heavily contaminated and less contaminated areas at four different sites. Overall, TGGE profiles obtained from heavily contaminated soils were less diverse than those from less contaminated soils. This decrease in diversity may be due to toxicity, since significantly fewer Mycobacterium phylotypes were detected in soils determined to be toxic by the Microtox assay than in nontoxic soils. Sequencing and phylogenetic analysis of prominent TGGE bands indicated that novel strains dominated the soil Mycobacterium community. Mineralization studies using [¹⁴C]pyrene added to four petroleum-contaminated soils, with and without the addition of the known pyrene degrader Mycobacterium sp. strain RJGII-135, indicated that inoculation increased the level of degradation in three of the four soils. Mineralization results obtained from a sterilized soil inoculated with strain RJGII-135 suggested that competition with indigenous microorganisms may be a significant factor affecting biodegradation of PAHs. Pyrene-amended soils, with and without inoculation with strain RJGII-135, experienced both increases and decreases in the population sizes of the inoculated strain and indigenous Mycobacterium populations during incubation.     

A human health risk assessment of soil and crops contaminated by heavy metals in industrial regions,central Iran

In this study, the concentrations of heavy metal (Cd, Pb, Fe, and Ni) in contaminated soils adjacent to two steel mill companies and in three crops (i.e., wheat, rice, and onion) grown in these regions were compared with a non-industrial site in Isfahan province, central Iran. The results were manifold. The heavy metal concentrations of both the soil and crops within the two industrial regions turned out to be more significant than the nonindustrial counterpart. In addition, the soils surrounding the companies were demonstrated to be contaminated by Cd, Pb, and Ni according to the limits provided by the international standards (i.e., USEPA and European Union standards). As for the crops from the investigated contaminated sites, the mean concentrations of Cd, Ni, and Pb exceeded the maximum permissible levels for human consumption stipulated by FAO/WHO standards. Furthermore, the values gained from the target hazard quotient were above one, meaning that the crops are contaminated. Given the results gained from a comparison made between estimated daily intake and tolerable daily intake, it can be concluded that the inhabitants of the two investigated contaminated sites are at a potentially serious health risk caused by exposure to the crops contaminated with the heavy metal.     

Mean geocarposphere temperatures that induce preharvest aflatoxin contamination of peanuts under drought stress

Apparently undamaged peanuts grown under environmental stress in the form of drought and heat become contaminated with Aspergillus flavus and aflatoxin in the soil prior to harvest. The upper mean temperature limit for aflatoxin contamination in undamaged peanut kernels grown under drought stress the latter 4–6 weeks of the growing season was between 29.6–31.3°C. The lower limit was between 25.7–26.3°C. That is, peanuts grown under drought stress with a mean geocarposphere temperature of 29.6°C were highly contaminated while those at 31.3°C were not contaminated. Likewise, those grown under drought stress with a mean geocarposphere temperature of 25.7°C were not contaminated while those subjected to a mean geocarposphere temperature of 26.0°C resulted in some categories becoming contaminated. Increasing the mean temperature up to 29.6°C caused increasing amounts of contamination.Mention of a trademark or proprietary product does not constitute a guarantee or warranty of the product by the U.S. Department of Agriculture and does not imply its approval to the exclusion of other products that may also be suitable.     

克拉玛依石油污染土壤微生物群落结构及其代谢特征

为了分析克拉玛依油区内土壤中正构烷烃含量间的差异,微生物群落生理多样性、微生物代谢活性在不同石油污染梯度土壤中的变化规律。本研究采用GC、平板稀释法、Biolog微平板技术探讨了土壤微生物群落特征在3种不同污染程度下的变化情况。研究表明,石油污染土壤烷烃含量与微生物代谢活性呈显著负相关(r=-0.783, p<0.05)。随着石油污染程度增加微生物数量呈下降趋势,不同石油污染土壤中细菌数量占决定优势,细菌>真菌>放线菌。不同石油污染土壤微生物群落对6大碳源的利用体现出差异。主成分分析(PCA)表明,清洁土壤与石油污染土壤对底物利用有明显差异。石油污染严重土样碳源利用率为"酯类>酸类>胺类>氨基酸类>单糖/糖苷/聚合糖类>醇类"。本研究成果为后期修复污染土壤时调整投入的碳源底物等提供科学帮助。     

Suitability of aromatic plants for phytoremediation of heavy metal contaminated areas: a review

Abstract

This review briefly elucidates the research undertaken and benefits of using aromatic plants for remediation of heavy metal polluted sites. A sustainable approach to mitigate heavy metal contamination of environment is need of the hour. Phytoremediation has emerged to be one of the most preferable choices for combating the metal pollution problem. Aromatic plants can be used for remediation of contaminated sites as they are non-food crops thus minimizing the risk of food chain contamination. Most promising aromatic plants for phytoremediation of heavy metal contaminated sites have been identified from families – Poaceae, Lamiaceae, Asteraceae, and Geraniaceae. They act as potential phytostabilisers, hyper accumulators, bio-monitors, and facultative metallophytes. Being high value economic crops, monetary benefits can be obtained by growing them in tainted areas instead of food crops. It has been observed that heavy metal stress enhances the essential oil percentage of certain aromatic crops. Research conducted on some major aromatic plants in this context has been highlighted in the present review which suggests that aromatic plants hold a great potential for phytoremediation. It has been reported that essential oil from aromatic crops is not contaminated by heavy metals significantly. Thus, aromatic plants are emerging as an ideal candidate for phytoremediation.

Highlights

? Aromatic plants hold a great potential for phytoremediation of heavy metal contaminated sites.

? Being high value economic crops, monetary benefits can be obtained by growing them in contaminated areas instead of food crops.

? Research done on some major aromatic plants in this context has been highlighted in the present review.     

Miscanthus as a Productive Biofuel Crop for Phytoremediation

There are many locations where soil quality improvements would be beneficial because of contamination, erosion, flooding, or past human activities. Miscanthus, a C-4 grass related to sugarcane, grows well in mildly contaminated soil and on sites where soil quality is poor, particularly with respect to nitrogen. Because of its high biomass yield, it is of interest as an energy crop, and as a plant to use for simultaneous crop production and phytoremediation. Here we review recent literature on using miscanthus for combined biomass production and phytoremediation of contaminated and marginal lands. We analyze both advantages and disadvantages for production of this crop along with phytoremediation of sites contaminated with metals and petroleum hydrocarbon. Reports of laboratory and field investigations, which use Miscanthus spp. for stabilizing and removing metals are considered. The potential for growing miscanthus commercially at contaminated and marginal sites in the regions of Central and Eastern Europe as well as the United States appears to be good because large quantities of biomass can be produced and effective phyto-stabilization can be achieved with very slow metal removal over time. In addition, soil quality is improved in many cases.     

Forensic Application of Microbiological Culture Analysis To Identify Mail Intentionally Contaminated with Bacillus anthracis Spores

The discovery of a letter intentionally filled with dried Bacillus anthracis spores in the office of a United States senator prompted the collection and quarantine of all mail in congressional buildings. This mail was subsequently searched for additional intentionally contaminated letters. A microbiological sampling strategy was used to locate heavy contamination within the 642 separate plastic bags containing the mail. Swab sampling identified 20 bags for manual and visual examination. Air sampling within the 20 bags indicated that one bag was orders of magnitude more contaminated than all the others. This bag contained a letter addressed to Senator Patrick Leahy that had been loaded with dried B. anthracis spores. Microbiological sampling of compartmentalized batches of mail proved to be efficient and relatively safe. Efficiency was increased by inoculating culture media in the hot zone rather than transferring swab samples to a laboratory for inoculation. All mail sampling was complete within 4 days with minimal contamination of the sampling environment or personnel. However, physically handling the intentionally contaminated letter proved to be exceptionally hazardous, as did sorting of cross-contaminated mail, which resulted in generation of hazardous aerosol and extensive contamination of protective clothing. Nearly 8 × 10⁶ CFU was removed from the most highly cross-contaminated piece of mail found. Tracking data indicated that this and other heavily contaminated envelopes had been processed through the same mail sorting equipment as, and within 1 s of, two intentionally contaminated letters.     

Pb和Cd对森林土壤细菌功能多样性及群落结构的影响

重金属的毒性系数（The Toxic Factor,TF）是评价重金属潜在生态风险指数（potential ecological risk index,RI）的关键参数。为了探究基于Hakanson提出的TF值是否适用于重金属对土壤微生物的生态风险评估,以TF值为5和30的铅（Pb）和镉（Cd）构建土壤微宇宙试验,构建不同的RI水平（100、200和400）,通过Biolog-ECO板和高通量测序技术分析了Pb和Cd分别对细菌功能多样性及群落结构的影响。结果表明,对照处理（CK）的细菌丰度、功能多样性（Shannon指数,Simpson指数和McIntosh指数）和基因多样性（ACE和Chao1指数）均大于Pb、Cd污染的土壤,随着RI水平的升高,Pb和Cd污染土壤中细菌的丰度、功能多样性（Shannon指数和McIntosh指数）和基因多样性（Chao1指数和ACE指数）呈下降趋势。相同RI水平下,Pb污染土壤中细菌群落的丰度、平均颜色变化率（AWCD）、功能多样性指数、OTUs数和基因多样性指数均显著大于Cd污染（P<0.05）;6大类碳源利用率及主成分（PCA）分析表明,Pb污染土壤中细菌对糖类和羧酸的利用率均显著大于Cd污染（P<0.05）,在不同RI水平和重金属比例下,碳源利用模式而有所不同。同一RI水平下,相对于Pb污染,Cd污染土壤中变形菌门的相对丰度较为丰富,而绿弯菌门的相对丰度稀少;Pb和Cd污染土壤中慢生根瘤菌属、鞘脂单胞菌属、链霉菌属和norank_f__Roseiflexaceae等不同属细菌相对丰度表现出差异性。上述结果表明Hakanson提出的TF值并不适用于评估重金属Pb和Cd对土壤微生物的潜在生态风险。     

Effects of biochar amendment on root traits and contaminant availability of maize plants in a copper and arsenic impacted soil

Background and aims

Biochar has been proposed as a tool to enhance phytostabilisation of contaminated soils but little data are available to illustrate the direct effect on roots in contaminated soils. This work aimed to investigate specific root traits and to assess the effect of biochar amendment on contaminant availability.

Methods

Amendment with two different types of biochar, pine woodchip and olive tree pruning, was assessed in a rhizobox experiment with maize planted in a soil contaminated with significant levels of copper and arsenic.

Results

Amendment was found to significantly improve root traits compared to the control soil, particularly root mass density and root length density. Copper uptake to plants and ammonium sulphate extractable copper was significantly less in the biochar amended soils. Arsenic uptake and extractability varied with type of biochar used but was not considered to be the limiting factor affecting root and shoot development.

Conclusions

Root establishment in contaminated soils can be enhanced by biochar amendment but choice of biochar is key to maximising soil improvement and controlling contaminant availability.     

Phytoremediation of Heavy Metals in Contaminated Water and Soil Using Miscanthus sp. Goedae-Uksae 1

The aim of this study is to characterize the heavy metal phytoremediation potential of Miscanthus sp. Goedae-Uksae 1, a hybrid, perennial, bio-energy crop developed in South Korea. Six different metals (As, Cu, Pb, Ni, Cd, and Zn) were used for the study. The hybrid grass effectively absorbed all the metals from contaminated soil. The maximum removal was observed for As (97.7%), and minimum removal was observed for Zn (42.9%). Similarly, Goedae-Uksae 1 absorbed all the metals from contaminated water except As. Cd, Pb, and Zn were completely (100%) removed from contaminated water samples. Generally, the concentration of metals in roots was several folds higher than in shoots. Initial concentration of metals highly influenced the phytoremediation rate. The results of the bioconcentration factor, translocation factor, and enrichment coefficient tests indicate that Goedae-Uksae 1 could be used for phytoremediation in a marginally contaminated ecosystem.     

A mycosis of the American lobster, Homarus americanus, caused by Fusarium sp.

Successful inoculations of citrus red mites, Panonychus citri, with the nonoccluded virus were made by feeding healthy mites through membranes on contaminated lemon fruit. Manipulation of the membranes showed that healthy mites pick up the virus from contaminated surface substrates rather than from within plant cells. Electron microscopical studies substantiated that feces of infected mites should be highly infectious since the hindgut contains numerous virus rods.     

Potential for bioremediation of fuel‐contaminated soil in Antarctica

A preliminary investigation was conducted to identify the presence of bacteria in fuel‐contaminated Antarctic soil that could potentially be used to bioremediate the contaminated soil at McMurdo Station and other sites in Antarctica. The ability of soil microorganisms to metabolize fuels under the extreme climatic and oligotrophic conditions of Antarctica was of concern. Bacteria were isolated from fuel‐contaminated soil on site at McMurdo Station. Bacteria from noncontaminated soil near the station were also studied for comparison. The Antarctic soil microorganisms exhibited the ability to endure cold and oligotrophic environments. Experiments also showed that bacteria from the fuel spill site were active in their contaminated environment and that acclimation to xenobiotic compounds was necessary. Application of bioremediation in the extreme environmental conditions found at McMurdo Station, Antarctica, were also considered. The possibility of altering environmental factors necessary to adequately support in situ bioremediation in this extreme climate is discussed.     

The use of the three-ridge clam (Amblema perplicata) to monitor trace metal contamination

The three-ridge clamAmblema perplicata was used to monitor two streams for the presence of zinc (Zn) and cadmium (Cd) derived from an industrial source. Clams were collected from a relatively uncontaminated area in one river and transported to four study sites in the two contaminated streams. The clams were placed into polyethylene cages and left in these streams for one week. Control clams were treated in a similar manner and left in the uncontaminated river.The highest mean concentration of Zn (956 µg/g dry wt) was found in the gill tissue of clams from the most contaminated site. The highest mean Cd concentration (18.6 µg/ g dry wt) was found in digestive glands of clams, also from the most contaminated site. Mean concentrations at contaminated sites were significantly higher than background and control levels; the findings suggest that these particular organs of clams may be useful in monitoring levels of Zn and Cd in other freshwater systems.     

Detection and identification by PCR of <Emphasis Type="Italic">Clostridium chauvoei</Emphasis> in clinical isolates,bovine faeces and substrates from biogas plant

Background  

Clostridium chauvoei causes blackleg, an acute disease associated with high mortality in ruminants. The apparent primary port of entry is oral, during grazing on pasture contaminated by spores. Cases of blackleg can occur year after year on contaminated pastures. A method to determine the prevalence of C. chauvoei spores on pasture would be useful.     

Detection of Environmental Sources of Histoplasma capsulatum in Chiang Mai, Thailand, by Nested PCR

Histoplasmosis is a systemic mycosis caused by inhaling spores of Histoplasma capsulatum, a dimorphic fungus. This fungus grows in soil contaminated with bat and avian excreta. Each year, patients with disseminated histoplasmosis have been diagnosed in Chiang Mai, northern Thailand. No published information is currently available on the environmental sources of this fungus in Chiang Mai or anywhere else in Thailand. The aim of this study was to detect H. capsulatum in soil samples contaminated with bat guano and avian droppings by nested PCR. Two hundred and sixty-five samples were collected from the following three sources: soil contaminated with bat guano, 88 samples; soil contaminated with bird droppings, 86 samples; and soil contaminated with chicken droppings, 91 samples. Genomic DNA was directly extracted from each sample, and H. capsulatum was detected by nested PCR using a primer set specific to a gene encoding 100-kDa-like protein (HcI, HcII and HcIII, HcIV). Histoplasma capsulatum was detected in seven of 88 soil samples contaminated with bat guano, one of 21 soil samples contaminated with pigeon droppings and 10 of 91 soil samples contaminated with chicken droppings. The results indicate the possibility of the association of bat guano and chicken droppings with H. capsulatum in this area of Thailand.