Activity of descending contralateral movement detector neurons and collision avoidance behaviour in response to head-on visual stimuli in locusts

We recorded the activity of the right and left descending contralateral movement detectors responding to 10-cm (small) or 20-cm (large) computer-generated spheres approaching along different trajectories in the locust's frontal field of view. In separate experiments we examined the steering responses of tethered flying locusts to identical stimuli. The descending contralateral movement detectors were more sensitive to variations in target trajectory in the horizontal plane than in the vertical plane. Descending contralateral movement detector activity was related to target trajectory and to target size and was most sensitive to small objects converging on a direct collision course from above and to one side. Small objects failed to induce collision avoidance manoeuvres whereas large objects produced reliable collision avoidance responses. Large targets approaching along a converging trajectory produced steering responses that were either away from or toward the side of approach of the object, whereas targets approaching along trajectories that were offset from the locust's mid-longitudinal body axis primarily evoked responses away from the target. We detected no differences in the discharge properties of the descending contralateral movement detector pair that could account for the different collision avoidance behaviours evoked by varying the target size and trajectories. We suggest that descending contralateral movement detector properties are better suited to predator evasion than collision avoidance.     

Ants find the shortest path: a mathematical proof

In the most basic application of Ant Colony Optimization (ACO), a set of artificial ants find the shortest path between a source and a destination. Ants deposit pheromone on paths they take, preferring paths that have more pheromone on them. Since shorter paths are traversed faster, more pheromone accumulates on them in a given time, attracting more ants and leading to reinforcement of the pheromone trail on shorter paths. This is a positive feedback process that can also cause trails to persist on longer paths, even when a shorter path becomes available. To counteract this persistence on a longer path, ACO algorithms employ remedial measures, such as using negative feedback in the form of uniform evaporation on all paths. Obtaining high performance in ACO algorithms typically requires fine tuning several parameters that govern pheromone deposition and removal. This paper proposes a new ACO algorithm, called EigenAnt, for finding the shortest path between a source and a destination, based on selective pheromone removal that occurs only on the path that is actually chosen for each trip. We prove that the shortest path is the only stable equilibrium for EigenAnt, which means that it is maintained for arbitrary initial pheromone concentrations on paths, and even when path lengths change with time. The EigenAnt algorithm uses only two parameters and does not require them to be finely tuned. Simulations that illustrate these properties are provided.     

蜜蜂蜂王信息素研究进展

综述了蜂王信息素的化学组成、特性、作用 ,以及与幼虫信息相互关系的研究进展 ,对蜂王信息素在养蜂和植物授粉中的应用做了介绍。西方蜜蜂的蜂王上颚腺信息素 (queen’smandibularglandpheromone,QMP)。QMP包含了 5种成分 :(E) -9-氧 -2 -癸烯酸 ( 9 ODA)、(R ,E) ( ) 和 (S,E) ( +) 9 羟基 -2 -癸烯酸 ( -9 HDA和 +9 HDA)、甲基p -羟基安息香酸盐 (HOB)、4-羟基 -3 -甲氧苯乙醇 (也称香草醇 ,HVA) ,9 ODA是其中最重要的成分 ;QMP的组分与蜜蜂的进化程度有关 ,进化程度越高则组分越复杂 ;QMP通过抑制保幼激素的产生来调节青年工蜂的个体发育。     

An experimental analysis of design choices of multi-objective ant colony optimization algorithms

There have been several proposals on how to apply the ant colony optimization (ACO) metaheuristic to multi-objective combinatorial optimization problems (MOCOPs). This paper proposes a new formulation of these multi-objective ant colony optimization (MOACO) algorithms. This formulation is based on adding specific algorithm components for tackling multiple objectives to the basic ACO metaheuristic. Examples of these components are how to represent multiple objectives using pheromone and heuristic information, how to select the best solutions for updating the pheromone information, and how to define and use weights to aggregate the different objectives. This formulation reveals more similarities than previously thought in the design choices made in existing MOACO algorithms. The main contribution of this paper is an experimental analysis of how particular design choices affect the quality and the shape of the Pareto front approximations generated by each MOACO algorithm. This study provides general guidelines to understand how MOACO algorithms work, and how to improve their design.     

The mate pursuit-predation avoidance tradeoff in the virile crayfish,Orconectes virilis

To better understand the tradeoff between mate pursuit and predation risk avoidance, the responses of male virile crayfish (Orconectes virilis) to female sex pheromone and conspecific alarm cue, alone and in combination were tested. Male crayfish were more active and exhibited less antipredator behavior in the pheromone treatment than in either the pheromone?+?alarm or alarm treatment. The results suggest a tradeoff in favor of risk avoidance when pheromone and risk stimuli are encountered together.     

The mate pursuit-predation avoidance tradeoff in the virile crayfish, Orconectes virilis

To better understand the tradeoff between mate pursuit and predation risk avoidance, the responses of male virile crayfish (Orconectes virilis) to female sex pheromone and conspecific alarm cue, alone and in combination were tested. Male crayfish were more active and exhibited less antipredator behavior in the pheromone treatment than in either the pheromone + alarm or alarm treatment. The results suggest a tradeoff in favor of risk avoidance when pheromone and risk stimuli are encountered together.     

Factors affecting pheromone production in beetles

Pheromone production and/or release by beetles is coordinated with a variety of behavioral, physiological, and environmental factors. To data, two basic mechanisms for the regulation of pheromone biosynthesis in beetles have been proposed. Pheromone biosynthesis may simply be dependent on the availability of biosynthetic precursors. Alternatively, certain stimuli or events may trigger pheromone biosynthesis via juvenile hormone (JH) action. JH may either act directly at the site of pheromone biosynthesis to enhance pheromone production or may act indirectly, through a brain hormone (which might be related to the pheromone biosynthesis activating neuropeptide) or through effects on antennal sensory response. Knowledge of the regulation of the initiation and termination of pheromone biosynthesis is reviewed. Mechanisms by which pheromone stereochemistry is controlled are also discussed. This is an important aspect of pheromone production in Coleoptera, since slight changes in the stereochemistry can completely alter the activity of the molecule. © 1994 Wiley-Liss, Inc.     

A Bio-inspired Collision Avoidance Model Based on Spatial Information Derived from Motion Detectors Leads to Common Routes

Avoiding collisions is one of the most basic needs of any mobile agent, both biological and technical, when searching around or aiming toward a goal. We propose a model of collision avoidance inspired by behavioral experiments on insects and by properties of optic flow on a spherical eye experienced during translation, and test the interaction of this model with goal-driven behavior. Insects, such as flies and bees, actively separate the rotational and translational optic flow components via behavior, i.e. by employing a saccadic strategy of flight and gaze control. Optic flow experienced during translation, i.e. during intersaccadic phases, contains information on the depth-structure of the environment, but this information is entangled with that on self-motion. Here, we propose a simple model to extract the depth structure from translational optic flow by using local properties of a spherical eye. On this basis, a motion direction of the agent is computed that ensures collision avoidance. Flying insects are thought to measure optic flow by correlation-type elementary motion detectors. Their responses depend, in addition to velocity, on the texture and contrast of objects and, thus, do not measure the velocity of objects veridically. Therefore, we initially used geometrically determined optic flow as input to a collision avoidance algorithm to show that depth information inferred from optic flow is sufficient to account for collision avoidance under closed-loop conditions. Then, the collision avoidance algorithm was tested with bio-inspired correlation-type elementary motion detectors in its input. Even then, the algorithm led successfully to collision avoidance and, in addition, replicated the characteristics of collision avoidance behavior of insects. Finally, the collision avoidance algorithm was combined with a goal direction and tested in cluttered environments. The simulated agent then showed goal-directed behavior reminiscent of components of the navigation behavior of insects.     

Does an antagonistic relationship between ABA and ethylene mediate shoot growth when tomato (Lycopersicon esculentum Mill.) plants encounter compacted soil?

This study tested the hypothesis that antagonistic interactions between abscisic acid (ABA) and ethylene mediate the effects of soil compaction on shoot growth. Isogenic wild‐type (Ailsa Craig), ABA‐deficient (notabilis) and a transgenic (ACO1_AS) tomato genotype with a reduced capacity to synthesize ethylene were examined. Exogenous ABA was also applied. Leaf area was comparable when Ailsa Craig and ACO1_AS were grown in uncompacted (1·1 g cm^?3) or compacted (1·5 g cm^?3) soil, but was lower in notabilis. However, a 1·1/1·5 g cm^?3 split‐pot treatment invoked marked genotypic differences, whereby leaf area was comparable to 1·1 g cm^?3 control plants in ACO1_AS but was intermediate between the 1·1 and 1·5 g cm^?3 treatments in Ailsa Craig and notabilis. ABA may be discounted as the root‐sourced signal responsible for reducing leaf area when the roots encountered compacted soil as Ailsa Craig and ACO1_AS showed differing responses despite similar increases in xylem sap ABA concentration; leaf area was invariably lower in notabilis. These genotypic differences were correlated with ethylene evolution; thus the greater leaf area in ACO1_AS was associated with its reduced ability to synthesize ethylene, whereas the reductions in leaf expansion observed when Ailsa Craig and notabilis encountered compacted soil were accompanied by increased ethylene production. Application of ABA had little effect on ACO1_AS, but promoted a recovery of leaf expansion in notabilis, and more surprisingly in Ailsa Craig. These results suggest that antagonistic interactions between ABA and ethylene may regulate leaf expansion when the root system simultaneously encounters uncompacted and compacted soil.     

Collision avoidance and resolution multiple access (CARMA)

The collision avoidance and resolution multiple access (CARMA) protocol is presented and analyzed. CARMA uses a collision avoidance handshake in which the sender and receiver exchange a request to send (RTS) and a clear to send (CTS) before the sender transmits any data. CARMA is based on carrier sensing, together with collision resolution based on a deterministic tree-splitting algorithm. For analytical purposes, an upper bound is derived for the average number of steps required to resolve collisions of RTSs using the tree-splitting algorithm. This bound is then applied to the computation of the average channel utilization in a fully connected network with a large number of stations. Under light-load conditions, CARMA achieves the same average throughput as multiple access protocols based on RTS/CTS exchange and carrier sensing. It is also shown that, as the arrival rate of RTSs increases, the throughput achieved by CARMA is close to the maximum throughput that any protocol based on collision avoidance (i.e., RTS/CTS exchange) can achieve if the control packets used to acquire the floor are much smaller than the data packet trains sent by the stations. Simulation results validate the simplifying approximations made in the analytical model. Our analysis results indicate that collision resolution makes floor acquisition multiple access much more effective. This revised version was published online in August 2006 with corrections to the Cover Date.     

Multiple pheromone types and other extensions to the Ant-Miner classification rule discovery algorithm

Ant-Miner is an ant-based algorithm for the discovery of classification rules. This paper proposes five extensions to Ant-Miner: (1) we utilize multiple types of pheromone, one for each permitted rule class, i.e. an ant first selects the rule class and then deposits the corresponding type of pheromone; (2) we use a quality contrast intensifier to magnify the reward of high-quality rules and to penalize low-quality rules in terms of pheromone update; (3) we allow the use of a logical negation operator in the antecedents of constructed rules; (4) we incorporate stubborn ants, an ACO variation in which an ant is allowed to take into consideration its own personal past history; (5) we use an ant colony behavior in which each ant is allowed to have its own values of the ?? and ?? parameters (in a sense, to have its own personality). Empirical results on 23 datasets show improvements in the algorithm??s performance in terms of predictive accuracy and simplicity of the generated rule set.     

蚂蚁群落优化算法在蛋白质折叠二维亲-疏水格点模型中的应用

氨基酸的亲疏水格点模型是研究蛋白质折叠的一种重要的简化模型,其优化问题是一个非确定型的多项式问题。采用蚂蚁群落优化算法对这一问题进行了研究,对测试数据的计算结果表明,在一定规模下,此算法能够有效地获得亲-疏水格点模型的最优解,其效率优于传统的Monte Carlo仿真等方法。     

Mathematical and kinetic modeling of biofilm reactor based on ant colony optimization

Inverse estimation of model parameters via mathematical modeling route, known as inverse modeling (IM), is an attractive alternative approach to the experimental methods. This approach makes use of efficient optimization techniques in the course of solution of an inverse problem with the aid of measured data. In this study, a novel optimization method based on ant colony optimization (ACO), denoted by ACO-IM, is presented for inverse estimation of kinetic and film thickness parameters of biofilm models that describe an experimental fixed bed anaerobic reactor. The proposed optimization method for parameter estimation emulates the fact that ants are capable of finding the shortest path from a food source to their nest by depositing a trial of pheromone during their walk. The efficacy of the ACO-IM for numerical estimation of bio-kinetic parameters is demonstrated through its application for the anaerobic treatment of industry wastewater in a fixed bed biofilm process. The results explain the rigorousness of mathematical models, the form of kinetic and film thickness models and the type of packing to be used with the biofilm process for accurate determination of kinetic and film thickness parameters so as to ensure reliable predictive performance of the biofilm reactor models.     

Electrophysiological characterisation of olfactory sensilla in the black bean aphid, Aphis fabae

Electrophysiological responses of three different olfactory sensilla (proximal primary rhinaria (PPR), distal primary rhinaria (DPR) and secondary rhinaria (SR)) to the sex pheromone components, nepetalactol, nepetalactone, and a plant volatile, (E)-2-hexenal, were investigated in four different morphs of the black bean aphid, Aphis fabae Scopoli. The DC responses recorded directly from the antennal sensilla and termed electrosensillograms (ESGs) were generally much larger (up to 14 mV) than electroantennogram (EAG) responses (up to 2.5 mV). Characteristic morph-specific response profiles to these compounds were observed in each type of rhinarium and response waveforms were different between (E)-2-hexenal and the sex pheromone components. (E)-2-Hexenal elicited the largest responses at PPR, while nepetalactol and nepetalactone elicited the largest responses at SR in gynoparae and males. Nepetalactol and nepetalactone also showed significant activities on DPR and PPR in all morphs. In contrast, (E)-2-hexenal had almost no activity on SR. However, almost all of the SR investigated in males and gynoparae were sensitive to both nepetalactol and nepetalactone. A small sub-set of male SR responded mainly to nepetalactol. SR of winged virginoparae did not respond to the sex pheromone compounds. Paraffin oil (the solvent control) also elicited significant responses at PPR in virginoparae but not in other morphs. In a further experiment, SR of winged virginoparae showed no response to 30 other plant volatile compounds or the alarm pheromone component, (E)-beta-farnesene. Nepetalactol and nepetalactone had similar dose-response profiles in the SR of gynoparae. The results indicate that SR in males and gynoparae are highly specialised to detect sex pheromone compounds, while the DPR and PPR are relatively broadly tuned to both plant volatiles and sex pheromone components. The presence of SR in winged virginoparae that are not responsive to sex pheromone components, alarm pheromone, or any of the plant volatile compounds tested may indicate a possible role of these sensilla to detect, as yet, unknown compound(s) with a high specificity. The present study also suggests that PPR may play a role in detecting paraffin-related compounds such as cuticular hydrocarbons of plants.     

Effect of Cheonggukjang supplementation upon hepatic acyl-CoA synthase, carnitine palmitoyltransferase I, acyl-CoA oxidase and uncoupling protein 2 mRNA levels in C57BL/6J mice fed with high fat diet

This study investigated the effect of Cheonggukjang on mRNA levels of hepatic acyl-CoA synthase (ACS), carnitine palmitoyltransferase I (CPT-I), acyl-CoA oxidase (ACO) and uncoupling protein 2 (UCP2), and on serum lipid profiles in C57BL/6J mice. Thirty male C57BL/6J mice were divided into three groups; normal diet (ND), high fat diet (HD) and high fat diet with 40% Cheonggukjang (HDC). Energy intake was significantly higher in the HDC group than in the ND and HD groups. The HDC group normalized in weight gain, epididymal and back fat (g/100 g) accumulation which are increased by high fat diet. Serum concentrations of triglyceride and total cholesterol in the HDC were significantly lower than those in the HD group. These results were confirmed by hepatic mRNA expression of enzymes and protein (ACS, CPT-1, ACO, UCP2) which is related with lipid metabolism by RT-PCR. Hepatic CPT-I, ACO and UCP2 mRNA expression was increased by Cheonggukjang supplementation. We demonstrated that Cheonggukjang supplement leads to increased mRNA expressions of enzymes and protein involved in fatty acid oxidation in liver, reduced accumulation of body fat and improvement of serum lipids in high fat diet fed mice.     

A Probabilistic Model for Hydrokinetic Turbine Collision Risks: Exploring Impacts on Fish

A variety of hydrokinetic turbines are currently under development for power generation in rivers, tidal straits and ocean currents. Because some of these turbines are large, with rapidly moving rotor blades, the risk of collision with aquatic animals has been brought to attention. The behavior and fate of animals that approach such large hydrokinetic turbines have not yet been monitored at any detail. In this paper, we conduct a synthesis of the current knowledge and understanding of hydrokinetic turbine collision risks. The outcome is a generic fault tree based probabilistic model suitable for estimating population-level ecological risks. New video-based data on fish behavior in strong currents are provided and models describing fish avoidance behaviors are presented. The findings indicate low risk for small-sized fish. However, at large turbines (≥5 m), bigger fish seem to have high probability of collision, mostly because rotor detection and avoidance is difficult in low visibility. Risks can therefore be substantial for vulnerable populations of large-sized fish, which thrive in strong currents. The suggested collision risk model can be applied to different turbine designs and at a variety of locations as basis for case-specific risk assessments. The structure of the model facilitates successive model validation, refinement and application to other organism groups such as marine mammals.     

Nanoflow LC/ion mobility/CID/TOF for proteomics: analysis of a human urinary proteome

A prototype linear octopole ion trap/ion mobility/tandem mass spectrometer has been coupled with a nanoflow liquid chromatography separation approach and used to separate and characterize a complicated peptide mixture from digestion of soluble proteins extracted from human urine. In this approach, two dimensions of separation (nanoflow liquid chromatography and ion mobility) are followed by collision induced dissociation (CID) and mass spectrometry (MS) analysis. From a preliminary analysis of the most intense CID-MS features in a part of the dataset, it is possible to assign 27 peptide ions which correspond to 13 proteins. The data contain many additional CID-MS features for less intense ions. A limited discussion of these features and their potential utility in identifying complicated peptide mixtures required for proteomics study is presented.     

Perceiving time to collision activates the sensorimotor cortex

The survival of many animals hinges upon their ability to avoid collisions with other animals or objects, or to precisely control the timing of collisions. Optical expansion provides a compelling impression of object approach and in principle can provide the basis for judgments of time to collision (TTC) [1]. It has been demonstrated that pigeons [2] and houseflies [3] have neural systems that can initiate rapid coordinated actions on the basis of optical expansion. In the case of humans, the linkage between judgments of TTC and coordinated action has not been established at a cortical level. Using functional magnetic resonance imaging (fMRI), we identified superior-parietal and motor-cortex areas that are selectively active during perceptual TTC judgments, some of which are normally involved in producing reach-to-grasp responses. These activations could not be attributed to actual movement of participants. We demonstrate that networks involved in the computational problem of extracting TTC from expansion information have close correspondence with the sensorimotor systems that would be involved in preparing a timed motor response, such as catching a ball or avoiding collision.     

不同结构的外源ACO基因导入香石竹对瓶插寿命的影响

以香石竹叶片为外植体 ,利用根癌农杆菌 (Agrobacteriumtumefaciens)介导法 ,将香石竹ACC氧化酶 (ACO)基因核DNA的正义 (sense)、反义 (antisense)、正义重复 (sensedirectrepeat)和反义重复 (antisensedirectrepeat)等 4种T DNA结构导入香石竹‘Master’品种。经Southern杂交检测证明目的基因已整合到香石竹基因组 ,共获得 14个转化株系。在 25℃条件下比较瓶插寿命 ,对照植株花朵瓶插寿命为 5.8d ,多数转化株系花朵瓶插寿命达 11d ,最长者可达 12.8d。大多数转基因株系切花衰老过程中乙烯释放量显著减少 ,部分转基因株系切花衰老过程中几乎检测不到乙烯 ,而对照有明显的峰值。通过对本研究转化ACO基因核DNA与前人转化ACO基因cDNA延长瓶插寿命比较以及对不同T DNA结构的转化抑制内源基因表达的程度进行比较后 ,初步判断用核DNA转化后对内源基因的抑制效果与cDNA相当甚至更明显 ,反义基因可以比正义基因更有效地抑制内源的同源基因的表达 ,转重复基因比转单个基因能更有效地抑制内源的同源基因的表达。     

GhXB38D represses cotton fibre elongation through ubiquitination of ethylene biosynthesis enzymes GhACS4 and GhACO1

Ethylene plays an essential role in the development of cotton fibres. Ethylene biosynthesis in plants is elaborately regulated by the activities of key enzymes, 1-aminocyclopropane-1-carboxylate oxidase (ACO) and 1-aminocyclopropane-1-carboxylate synthase (ACS); however, the potential mechanism of post-translational modification of ACO and ACS to control ethylene synthesis in cotton fibres remains unclear. Here, we identify an E3 ubiquitin ligase, GhXB38D, that regulates ethylene biosynthesis during fibre elongation in cotton. GhXB38D gene is highly expressed in cotton fibres during the rapid elongation stage. Suppressing GhXB38D expression in cotton significantly enhanced fibre elongation and length, accompanied by the up-regulation of genes associated with ethylene signalling and fibre elongation. We demonstrated that GhXB38D interacts with the ethylene biosynthesis enzymes GhACS4 and GhACO1 in elongating fibres and specifically mediates their ubiquitination and degradation. The inhibition of GhXB38D gene expression increased the stability of GhACS4 and GhACO1 proteins in cotton fibres and ovules, resulting in an elevated concentration of ethylene. Our findings highlight the role of GhXB38D as a regulator of ethylene synthesis by ubiquitinating ACS4 and ACO1 proteins and modulating their stability. GhXB38D acts as a negative regulator of fibre elongation and serves as a potential target for enhancing cotton fibre yield and quality through gene editing strategy.