Effects of Seasonality and Dispersal on the Ciliate Community Inhabiting Bromeliad Phytotelmata in Riparian Vegetation of a Large Tropical River

This study evaluated the influence of rainfall amount on the abundance, species richness, and species occurrence and abundance distribution of the ciliate community associated with the bromeliad Aechmea distichantha. The plants were collected from a rock wall of about 10‐km long at the left bank of Paraná River. We assessed the effects of both spatial and temporal variables on the community attributes, as well as whether plants geographically closer have a similar abundance distribution and species composition. The ciliate community was substantially distinct between both hydrological periods, with greater values of species richness and abundance in the rainy period. No spatial structuring (differences in the species occurrence and abundance distribution among strata) or geographical similarity (similarity in ciliate species composition among the plants) was found. Multiple regression analysis showed a positive relationship only between the ciliate abundances and water volumes for both periods. Although few of the formulated predictions were confirmed, our study provides valuable information on the ecological aspects of the ciliate community inhabiting bromeliad phytotelmata.     

The Relative Contribution of Specialists and Generalists to Mistletoe Dispersal: Insights from a Neotropical Rain Forest

Mistletoes rely on birds for seed dispersal, but the presumed importance of mistletoe‐specialist frugivores has not been critically examined nor compared with generalist frugivores and opportunistic foragers. The contribution of these three groups was compared directly by quantifying bird visitation to fruiting mistletoe plants ( Oryctanthus occidentalis: Loranthaceae) at Barro Colorado Island, Panama, and by comparing these results with proportions calculated from other empirical studies of mistletoe visitation conducted elsewhere. After more than 100 h of timed watches, 23 bird species were recorded visiting eight heavily infected host trees ( Luehea seemannii: Tiliaceae). Eight of these species visited mistletoe, of which five (all tyrannids) consumed mistletoe fruit. Although two mistletoe specialist frugivores ( Tyrannulus elatus and Zimmerius vilissimus) removed most fruit (73%), more than a quarter was consumed by one generalist frugivore ( Mionectes oleagineus) and two opportunists ( Myiozetetes cayanensis and Myiozetetes similis). Post consumption behaviour varied: the specialists flew from mistletoe to mistletoe, the generalist rested in the subcanopy and understory, and the opportunists spent most time hawking insects and resting high in the canopy. Integrating these data with previous work, the dietary specialization, short gut passage rate and strict habitat preferences of mistletoe specialists suggests that their services relate primarily to intensification and contagious dispersal, while species with broader diets are more likely to visit uninfected trees and establish new infections. The presumed importance of mistletoe‐specialist frugivores was not supported and mistletoes are considered to be comparable to many other bird‐dispersed plants, relying on both specialist and generalist frugivores, while opportunists may be disproportionately important in long‐distance dispersal.     

Environmental change and predator diversity drive alpha and beta diversity in freshwater macro and microorganisms

Global biodiversity is eroding due to anthropogenic causes, such as climate change, habitat loss, and trophic simplification of biological communities. Most studies address only isolated causes within a single group of organisms; however, biological groups of different trophic levels may respond in particular ways to different environmental impacts. Our study used natural microcosms to investigate the predicted individual and interactive effects of warming, changes in top predator diversity, and habitat size on the alpha and beta diversity of macrofauna, microfauna, and bacteria. Alpha diversity (i.e., richness within each bromeliad) generally explained a larger proportion of the gamma diversity (partitioned in alpha and beta diversity). Overall, dissimilarity between communities occurred due to species turnover and not species loss (nestedness). Nevertheless, the three biological groups responded differently to each environmental stressor. Microfauna were the most sensitive group, with alpha and beta diversity being affected by environmental changes (warming and habitat size) and trophic structure (diversity of top predators). Macrofauna alpha and beta diversity was sensitive to changes in predator diversity and habitat size, but not warming. In contrast, the bacterial community was not influenced by the treatments. The community of each biological group was not mutually concordant with the environmental and trophic changes. Our results demonstrate that distinct anthropogenic impacts differentially affect the components of macro and microorganism diversity through direct and indirect effects (i.e., bottom‐up and top‐down effects). Therefore, a multitrophic and multispecies approach is necessary to assess the effects of different anthropogenic impacts on biodiversity.     

A Canopy Trimming Experiment in Puerto Rico: The Response of Litter Invertebrate Communities to Canopy Loss and Debris Deposition in a Tropical Forest Subject to Hurricanes

Hurricanes cause canopy removal and deposition of pulses of litter to the forest floor. A Canopy Trimming Experiment (CTE) was designed to decouple these two factors, and to investigate the separate abiotic and biotic consequences of hurricane-type damage and monitor recovery processes. As part of this experiment, effects on forest floor invertebrate communities were studied using litterbags. Canopy opening resulted in increased throughfall, soil moisture and light levels, but decreased litter moisture. Of these, only throughfall and soil moisture had returned to control levels 9 months after trimming. Canopy opening was the major determinant of adverse changes in forest floor invertebrate litter communities, by reducing diversity and biomass, irrespective of debris deposition, which played a secondary role. Plots subjected to the most disturbance, with canopy removed and debris added, had the lowest diversity and biomass. These two parameters were higher than control levels when debris was added to plots with an intact canopy, demonstrating that increased nutrient potential or habitat complexity can have a beneficial effect, but only if the abiotic conditions are suitable. Animal abundance remained similar over all treatments, because individual taxa responded differently to canopy trimming. Mites, Collembola, and Psocoptera, all microbiovores feeding mainly on fungal hyphae and spores, responded positively, with higher abundance in trimmed plots, whereas all other taxa, particularly predators and larger detritivores, declined in relative abundance. Litterbag mesh size and litter type had only minor effects on communities, and canopy trimming and debris deposition explained most variation between sites. Effects of trimming on diversity, biomass, and abundance of some invertebrate taxa were still seen when observations finished and canopy closure was complete at 19 months. This suggests that disturbance has a long-lasting effect on litter communities and may, therefore, delay detrital processing, depending on the severity of canopy damage and rate of regrowth.     

Movement Behavior of Native and Invasive Small Mammals Shows Logging May Facilitate Invasion in a Tropical Rain Forest

Invasive species pose one of the greatest threats to biodiversity. This study investigates the extent to which human disturbance to natural ecosystems facilitates the spread of non‐native species, focusing on a small mammal community in selectively logged rain forest, Sabah, Borneo. The microhabitat preferences of the invasive Rattus rattus and three native species of small mammal were examined in three‐dimensional space by combining the spool‐and‐line technique with a novel method for quantifying fine‐scale habitat selection. These methods allowed the detection of significant differences for each species between the microhabitats used compared with alternative, available microhabitats that were avoided. Rattus rattus showed the greatest preference for heavily disturbed habitats, and in contrast to two native small mammals of the genus Maxomys, R. rattus showed high levels of arboreal behavior, frequently leaving the forest floor and traveling through the understory and midstory forest strata. This behavior may enable R. rattus to effectively utilize the complex three‐dimensional space of the lower strata in degraded forests, which is characterized by dense vegetation. The behavioral flexibility of R. rattus to operate in both terrestrial and arboreal space may facilitate its invasion into degraded forests. Human activities that generate heavily disturbed habitats preferred by R. rattus may promote the establishment of this invasive species in tropical forests in Borneo, and possibly elsewhere. We present this as an example of a synergistic effect, whereby forest disturbance directly threatens biodiversity and indirectly increases the threat posed by invasive species, creating habitat conditions that facilitate the establishment of non‐native fauna.     

Applying Indigenous Knowledge to the Restoration of Degraded Tropical Rain Forest Clearings Dominated by Bracken Fern

The Lacandon Maya of Chiapas, southern Mexico, have traditionally used a long fallow rotational slash‐and‐burn system for maize production in small clearings within tropical forest. Although successional processes usually lead to rapid restoration of abandoned fields, the invasive fern, Pteridium aquilinium (commonly known as Bracken), can block natural succession. The Lacandon are aware of this and use the fast‐growing tree Balsa (Ochroma pyramidale) to accelerate succession toward mature forest. We carried out a 12‐month‐long experiment in a Bracken‐infested area to test the effectiveness of the Lacandon’s low‐input restoration techniques. We found that we could successfully establish Balsa in plots dominated by Bracken using the Lacandon methodology. Their technique involves broadcasting large numbers of small seeds and applying traditional weeding techniques. After 12 months’ growth, Balsa reached a top height of over 6 m and basal areas of 4.1 (±0.3) m²/ha. We contrasted this low‐cost traditional fallow management with more costly techniques involving transplanting Balsa seedlings and sowing directly in the experimental area. The results validated the effectiveness of the Lacandon method for directing succession and confirmed the general potential of Balsa as a facilitator in the restoration of degraded tropical forest areas.     

子午岭马栏林区主要森林群落的稳定性分析

选用构成群落稳定性指标体系的10项相关指标,采用Godron稳定性测定方法、主成分分析法以及Shan-non-Weiner物种多样性指数研究了子午岭马栏林区主要森林群落的稳定性状况及其与环境和群落生态特征间的关系。结果显示:(1)群落物种的总体多样性是白桦林>天然油松林>辽东栎林;而群落稳定性则表现为辽东栎林>天然油松林>白桦林;(2)各群落中影响主成分的主要因素均包含物种多样性因子和生活史阶段因子。表明物种多样性指数虽然是群落稳定性的重要影响因子,但由于存在其它因子的相互作用,不能单纯以群落物种多样性指数判断某具体群落的稳定性,必须在此基础上结合群落优势种群的年龄结构才能比较真实地评价群落的稳定性状态。     

Dispersal barriers and climate determine the geographic distribution of the helicopter damselfly Mecistogaster modesta

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Spillover of Insects from Rain Forest into Adjacent Oil Palm Plantations

Conversion of natural forest to oil palm plantations is a major threat to biodiversity in Southeast Asia. The retention of natural forest habitats within plantations has been proposed as a method to reduce biodiversity losses in agricultural areas, and we examined whether forest areas resulted in spillover of species into adjacent oil palm plantations. We sampled ants and butterflies along two 2‐km transects across an ecotone from plantation into adjacent forest in Sabah, Malaysian Borneo. Species richness of both taxa was reduced in plantations, but to a greater extent in butterflies (54% reduction) than in ants (25% reduction). Butterfly diversity increased in plantations with increasing proximity to forest primarily due to spillover of ‘vagrant’ forest species (whose larval host plants do not occur in plantations), although richness of species that could potentially breed in plantations also increased near to forest. By contrast, ants showed no spillover effects and were less sensitive to land‐use changes, with much higher levels of similarity in species assemblages across habitats than for butterflies. Our results for butterflies suggest that despite the negative impacts of plantations on diversity, proximity to forest could improve diversity in adjacent plantations for some taxa. Spillover of forest species implies that retaining forest areas within plantations may be important for facilitating dispersal of some species through the landscape.     

The Influence of Soil Type on Rain Forest Insect Herbivore Communities

Insect herbivores were collected from five species of dipterocarp tree seedling within a large‐scale reciprocal transplant experiment in Sabah, Malaysia, on alluvial and sandstone soils in both gap and understory plots. The aim was to determine whether the location and ecological specialization of seedlings influenced the herbivore communities found on and around them. Three major groups of folivores were collected: Coleoptera, Orthoptera, and larval Lepidoptera. Herbivory of all species was confirmed through laboratory trials. Herbivore abundance in the understory plots was extremely low relative to the gaps. Rank‐abundance curves were similar on both soil types, differing only within the Lepidoptera. Coleoptera and Orthoptera communities were numerically dominated by a small suite of species capable of feeding on all dipterocarp species tested, whereas lepidopteran communities had both greater species richness and diversity. When corrected for leaf area surveyed, the abundance of Coleoptera was similar on both soil types, while larval Lepidoptera were more abundant in sandstone plots and Orthoptera were more abundant in alluvial plots. Estimated species richness of all three taxa was greater in alluvial forest, but there were contrasting patterns in Simpson diversity and evenness between groups. Species richness of Lepidoptera was greatest on seedlings when grown in their native soil type, providing partial evidence for possible escape effects, although this was not matched by differences in folivore abundance. The link between herbivore communities and herbivory rates on rain forest tree seedlings is complex and is unlikely to be detected through simplistic measures of abundance, species richness, or diversity.     

Spatial and Temporal Patterns of Frugivorous Hornbill Movements in Central Africa and their Implications for Rain Forest Conservation

Tropical forest conservation and restoration require an understanding of the movements and habitat preferences of important seed dispersers. With forests now being altered at an unprecedented rate, avian frugivores are becoming increasingly vital for forest regeneration. Seed movement, however, is highly dependent on the behavioral characteristics of their dispersers. Here, we examined the movements, habitat preferences, and range sizes of two African frugivores: the Black‐casqued (Ceratogymna atrata) and the White‐thighed (Bycanistes albotibialis) Hornbill, in the lowland rain forests of southern Cameroon. Using satellite transmitters, we tracked eight hornbills for 3 yr to characterize their movements and relate them to environmental landscape features. Hornbill movements differed significantly, with B. albotibialis ranging over larger areas (mean = 20,274 ha) than C. atrata (mean = 5604 ha), and females of both species covering over 15 times the area of males. Evidence suggests that movements are irruptive during particular periods, perhaps driven by low resource availability. In addition, hornbills often returned to the same localities within a year, although movements were not characterized as migratory. Both species displayed significant differences in habitat preference, with B. albotibialis utilizing disturbed habitat more frequently than C. atrata (t = ?22.04, P = 2.2 × 10^?16). Major roads were found to act as barriers for C. atrata, but not for B. albotibialis. The ability of both hornbill species to move large distances suggests hornbills will play a vital role in the maintenance and regeneration of rain forests in Central Africa as forest fragmentation increases and terrestrial vertebrates decline in numbers.     

Diameter Growth of Juvenile Trees after Gap Formation in a Bolivian Rain Forest: Responses are Strongly Species‐specific and Size‐dependent

We evaluated growth responses to gap formation for juvenile individuals of three canopy rain forest species: Peltogyne cf. heterophylla, Clarisia racemosa and Cedrelinga catenaeformis. Gaps were formed during selective logging operations 7 yr before sampling in a Bolivian rain forest. We collected wood samples for tree‐ring analyses at different distances to the stump (<10, 10–40 and >40 m) and from trees with different diameters (5–30 cm diameter at breast height [dbh]). Tree‐rings width was measured in at least two radii and converted to average diameter growth. Changes in 7‐yr median diameter growth before and after selective logging were analyzed. Diameter growth rates significantly increased by 0.7–0.8 mm/yr after gap formation for P. heterophylla and C. catenaeformis, but not for C. racemosa. We applied a multiple regression analysis to explain variation in growth responses of P. heterophylla and C. catenaeformis by distance to logging gap and tree size. For P. heterophylla we found that growth increase occurring close to logging gaps was strongest for large juvenile trees (20–25 cm dbh) and almost absent in small juveniles. For C. catenaeformis, variation in growth responses was not related to tree size or distance to gaps. Our results show that growth responses to gap formation strongly differ across species and tree sizes. This finding calls for caution in the interpretation of growth releases in tree‐ring series, as gap formation does not necessarily invoke growth responses and if such growth responses occur, their strength is species‐ and size specific.     

Forest phenology and a warmer climate – growing season extension in relation to climatic provenance

Predicting forest responses to warming climates relies on assumptions about niche and temperature sensitivity that remain largely untested. Observational studies have related current and historical temperatures to phenological shifts, but experimental evidence is sparse, particularly for autumn responses. A 4 year field experiment exposed four deciduous forest species from contrasting climates (Liquidambar styraciflua, Quercus rubra, Populus grandidentata, and Betula alleghaniensis) to air temperatures 2 and 4 °C above ambient controls, using temperature‐controlled open top chambers. Impacts of year‐round warming on bud burst (BB), senescence, and abscission were evaluated in relation to thermal provenance. Leaves emerged earlier in all species by an average of 4–9 days at +2 °C and 6–14 days at +4 °C. Magnitude of advance varied with species and year, but was larger for the first 2 °C increment than for the second. Effect of warming increased with early BB, favoring Liquidambar, but even BB of northern species advanced, despite temperatures exceeding those of the realized niche. Treatment differences in BB were inadequately explained by temperature sums alone. In autumn, chlorophyll was retained an average of 4 and 7 days longer in +2 and +4 °C treatments, respectively, and abscission delayed by 8 and 13 days. Growing seasons in the warmer atmospheres averaged 5–18 days (E2) and 6–28 days (E4) longer, according to species, with the least impact in Quercus. Results are compared with a 16 years record of canopy onset and offset in a nearby upland deciduous forest, where BB showed similar responsiveness to spring temperatures (2–4 days °C^?1). Offset dates in the stand tracked August–September temperatures, except when late summer drought caused premature senescence. The common garden‐like experiment provides evidence that warming alone extends the growing season, at both ends, even if stand‐level impacts may be complicated by variation in other environmental factors.     

Biodiversity of Cetoniinae beetles (Coleoptera: Scarabaeidae) in introduced and native habitats in the Brazilian Atlantic Forest

The ecology of the beetles of the subfamily Cetoniinae (Coleoptera: Scarabaeidae) is relatively poorly known worldwide. In the neotropics in particular, there are far less studies than in other biogeographic regions. In part due to this lack of knowledge, cetoniines are not considered indicators of habitat quality in the Neotropical region. In this study, we compare the abundance, diversity, and species composition of cetoniines in three different habitats in Brazil: two exotic (Brachiaria pasturelands and eucalyptus plantation) and one native (Brazilian Atlantic Forest). We also provide diagnostic images of both sexes and of the genitalia of males of all species to facilitate species identification in further studies. The beetles were collected weekly from September to December 2012 with traps baited with fermented fruit, in five eucalyptus plantations (Eucalyptus grandis Hill ex Maiden), five exotic pasturelands (Brachiaria spp.), and five patches of Brazilian Atlantic Forest. The abundance and diversity of cetoniines was found to be lower in the eucalyptus plantations and about the same in the forest and pasturelands. The low diversity found and the little information available on the ecology of Neotropical Cetoniinae is insufficient to propose these beetles as candidates for the habitat evaluation in Brazil.     

Altitudinal Patterns in Two Syntopic Species of Sturnira (Mammalia: Chiroptera: Phyllostomidae) in the Montane Rain Forests of Argentina

We evaluated altitudinal segregation in two Sturnira species as a mechanism allowing their coexistence. Tests were devised to discern between interspecific interactions and regional responses to geographic and environmental variables, using extensive capture data from 18 montane rain forest sites. No significant correlation between captures was found. Additionally and according to the hypothesis of historical occupation of highland versus lowland forests, each species has shown specificity in their response to the geographical and environmental variables. Our results indicated that abundance patterns in these bats likely result from the regional distribution of each species rather than local interactions between them, a pattern that may have ancient roots within the group.     

UniEuk: Time to Speak a Common Language in Protistology!

Universal taxonomic frameworks have been critical tools to structure the fields of botany, zoology, mycology, and bacteriology as well as their large research communities. Animals, plants, and fungi have relatively solid, stable morpho‐taxonomies built over the last three centuries, while bacteria have been classified for the last three decades under a coherent molecular taxonomic framework. By contrast, no such common language exists for microbial eukaryotes, even though environmental ‘‐omics’ surveys suggest that protists make up most of the organismal and genetic complexity of our planet's ecosystems! With the current deluge of eukaryotic meta‐omics data, we urgently need to build up a universal eukaryotic taxonomy bridging the protist ‐omics age to the fragile, centuries‐old body of classical knowledge that has effectively linked protist taxa to morphological, physiological, and ecological information. UniEuk is an open, inclusive, community‐based and expert‐driven international initiative to build a flexible, adaptive universal taxonomic framework for eukaryotes. It unites three complementary modules, EukRef, EukBank, and EukMap, which use phylogenetic markers, environmental metabarcoding surveys, and expert knowledge to inform the taxonomic framework. The UniEuk taxonomy is directly implemented in the European Nucleotide Archive at EMBL‐EBI, ensuring its broad use and long‐term preservation as a reference taxonomy for eukaryotes.     

Restoration of an Ecosystem Function to Revegetation Communities: The Role of Invertebrate Macropores in Enhancing Soil Water Infiltration

Guidelines for revegetation in agricultural landscapes may not address restoration of ecosystem functions because management is focused on the replanting stage, although certain functions are delivered by organisms that colonize revegetation months or years later. We investigated the ecosystem function of water infiltration to tree root zones and channels, delivered by invertebrates that form soil macropores. We measured macropore density and infiltration rates at revegetation sites established on retired grazing land, in relation to site age, tree species composition, and geographical location, compared with adjacent matched pastures. Revegetated sites had significantly more macropores than pastures, and revegetation sites aged 11–20 years had more macropores than sites aged 3–5 and 6–10 years. Tree species had a marginal effect, with more macropores in sites with Acacia spp. and Eucalyptus spp. than those with Eucalyptus spp. only. Besides ants, the main groups of soil burrowers were mygalomorph and lycosid spiders and also ground‐nesting native bees. Infiltration rates in revegetation sites aged 11–20 years were double those of pastures and of 3–5 and 6–10 year sites. This is the first study to quantify the rate of recovery of an invertebrate‐driven soil hydrological ecosystem function following revegetation.     

Avian frugivore assemblages on Celtis gomphophylla,Baker, in Budongo Forest Reserve,Uganda

The relationship between selective logging and avian frugivores feeding on Celtis gomphophylla was examined in Budongo Forest Reserve, from June to July 2005, using scan sampling. Abundance and species richness of avian frugivores were compared between two compartments (N3 and W22 last logged in 1952 and 1997 respectively). Two 1‐ha plots were established in each compartment from which two C. gomphophylla trees selected for observation. A total of 203 avian frugivores comprising 17 species, visited the eight C. gomphophylla trees. Avian frugivore abundance and richness were significantly higher in N3 than W22 (χ² = 5.83, χ² = 0.03, P < 0.05). Fischer's alpha diversity index also indicated a higher avian frugivore (frugivory?) in N3 than that in W22. The Sorensen's similarity index showed that species composition between the two compartments was moderately similar. The diversity of forest specialists and generalists was not significantly different in the two compartments (F = 0.3451, P = 0.082 and F = 0.368, P = 0.553). Our results stress the significance of logging intensity on avian feeding guilds and confirm that forests which have had enough recovery time are better habitats for avian frugivore assemblages.     

The Bromeliad Microcosm and the Assessment of Faunal Diversity in a Neotropical Forest1

The faunas of tank bromeliads were sampled over two years in three forest types at different elevations in the Luquillo Experimental Forest, Puerto Rico, and the diversity of their animal communities compared. Bromeliad plants behaved as islands in that, within forests, the species richness and abundance of their animal communities were significantly and positively correlated with increase in plant size. The amount of canopy debris they accumulated was similarly correlated with increase in plant size. Overall diversity was lowest in the dwarf forest, where plants were uniformly small. Animal communities were stable from year to year, and could be characterised for each forest type and for compartments within the plant. They showed a pattern of high dominance, which increased with elevation (Mc-Naughton index 37, 54, and 73, respectively, for the tabonuco, palo Colorado, and dwarf forest). Alpha-diversity for sites sampled in each year reflected net primary productivity (NPP) of the forest, declining with increasing elevation when animal abundance measures were used (jackknife estimates of Simpson's diversity index 6.54 & 11.04 [tabonuco], 3.53 & 6.22 [palo Colorado], and 2.75 & 2.17 [dwarf forest]). Species richness over the two years, however, was highest in the intermediate palo Colorado forest (187 species), compared to 146 and 88 in the tabonuco and dwarf forests, respectively. These figures were close to jackknife estimates of maximum species richness. The difference in species richness between tabonuco and palo Colorado forests was significant in one year only. In addition to NPP, other factors, such as litter quality and the structural complexity of the habitat in the palo Colorado forest, may have influenced species richness. The most abundant species in individual plants were also the most widely occurring, confirming known patterns of abundance and distribution in other functional groups. Diversity within bromeliad microcosms at different elevations supported known relationships between diversity, productivity, and habitat complexity along gradients and was not related to differences in the total bromeliad habitat available for colonization.