Regulation of NH4 + transport pathways in Pisum arvense roots

The effects of metabolic and protein synthesis inhibitors on NH₄ ⁺ uptake by Pisum arvense plants at low (0.05 mM) and high (1 mM) external ammonium concentration were studied. In short-time experiments cycloheximide decreased the ammonium uptake rate at low level of NH₄ ⁺ and increased the absorption of NH₄ ⁺ from uptake medium containing high ammonium concentration. Arsenate and azide supplied into uptake solutions at low ammonium concentration strongly decreased or completely suppressed the NH₄ ⁺ uptake rate, respectively. When the experiments were carried out at high level of ammonium only azide decreased the uptake rate of NH₄ ⁺ and arsenate stimulated this process. Dinitrophenol very strongly repressed the uptake rate of NH₄ ⁺ at both ammonium concentrations. After removing dinitrophenol from both solutions, neither at low nor high external ammonium level the recovery of NH₄ ⁺ uptake rate was achieved within 150 min or 3 h, respectively. The recovery of NH₄ ⁺ uptake rate after removing azide was observed within 90 min and 3 h at low and high ammonium concentrations, respectively. The regulation of NH₄ ⁺ uptake by some inhibitors at low external ammonium level was investigated using plasma membrane vesicles isolated from roots by two-phase partitioning. Orthovanadate completely suppressed the uptake of NH₄ ⁺ by vesicles and quinacrine decreased the NH₄ ⁺ uptake which 55 suggests that ammonium uptake depends on activities of plasma membrane-bound enzymes. On the other hand, it was found that dinitrophenol completely reduced the NH₄ ⁺ uptake by vesicles. The various effects of inhibitors on ammonium uptake dependent on external ammonium concentration suggest the action of different ammonium transport systems in Pisum arvense roots. The ammonium transport into root cells at low NH₄ ⁺ level requires energy and synthesis of protein in the cytoplasm. The research was supported by grant of KBN No. 6PO4C 068 08     

Fertilization rates and clay fixed ammonium in two Quebec soils

Clay fixed NH₄ ⁺ can provide a significant sink for fertilizer N, as well as a source of N for plant uptake. Knowledge or soil NH₄ ⁺ fixing capacity and release for crops is necessary to develop long-term fertilizer programs. Field experiments with corn (Zea mays L.) were carried out to investigate soil NH₄ ⁺ fixing capacity and subsequent release as influenced by fertilizer rates using ¹⁵N in a Ste. Rosalie clay (fine, mixed, frigid, Typic Humaquept) and a Chicot sandy clay loam (fine-loamy, mixed, frigid, Typic Hapludalf). With high N rates increased NH₄ ⁺ fixation occurred only in the Ste. Rosalie soil. At the end of the first growing season, fertilizer N recovery as clay fixed NH₄ ⁺ for high and normal rates of fertilizer in the Ste. Rosalie soil was 17.8% and 28.7%, respectively and the recovery for the high and normal rates in the Chicot soil was 4.6 and 10.5%, respectively. Significant amounts of clay fixed NH₄ ⁺-N were released in the soil profile in the second year after ¹⁵N application on the Chicot soil. Recently clay fixed fertilizer NH₄ ⁺N was released more rapidly than that of the native fixed NH₄ ⁺, from the surface layer of the Ste. Rosalie soil. The fertilizer fixed NH₄ ⁺ seems to be in a more labile N pool than the native fixed NH₄ ⁺-N in the Chicot soil.     

The seasonal dynamics of amino acids and other nutrients in Alaskan Arctic tundra soils

Past research strongly indicates the importance of amino acids in the N economy of the Arctic tundra, but little is known about the seasonal dynamics of amino acids in tundra soils. We repeatedly sampled soils from tussock, shrub, and wet sedge tundra communities in the summers of 2000 and 2001 and extracted them with water (H₂O) and potassium sulfate (K₂SO₄) to determine the seasonal dynamics of soil amino acids, ammonium (NH₄⁺), nitrate (NO₃^–), dissolved organic nitrogen (DON), dissolved organic carbon (DOC), and phosphate (PO₄^2–). In the H₂O extractions mean concentrations of total free amino acids (TFAA) were higher than NH₄⁺ in all soils but shrub. TFAA and NH₄⁺ were highest in wet sedge and tussock soils and lowest in shrub soil. The most predominant amino acids were alanine, arginine, glycine, serine, and threonine. None of the highest amino acids were significantly different than NH₄⁺ in any soil but shrub, in which NH₄⁺ was significantly higher than all of the highest individual amino acids. Mean NO₃^– concentrations were not significantly different from mean TFAA and NH₄⁺ concentrations in any soil but tussock, where NO₃^– was significantly higher than NH₄⁺. In all soils amino acid and NH₄⁺ concentrations dropped to barely detectable levels in the middle of July, suggesting intense competition for N at the height of the growing season. In all soils but tussock, amino acid and NH₄⁺ concentrations rebounded in August as the end of the Arctic growing season approached and plant N demand decreased. This pattern suggests that low N concentrations in tundra soils at the height of the growing season are likely the result of an increase in soil N uptake associated with the peak in plant growth, either directly by roots or indirectly by microbes fueled by increased root C inputs in mid-July. As N availability decreased in July, PO₄^2– concentrations in the K₂SO₄ extractions increased dramatically in all soils but shrub, where there was a comparable increase in PO₄^2– later in the growing season. Previous research suggests that these increases in PO₄^2– concentrations are due to the mineralization of organic phosphorus by phosphatase enzymes associated with soil microbes and plant roots, and that they may have been caused by an increase in organic P availability.     

γ‐Aminobutyric acid addition alleviates ammonium toxicity by limiting ammonium accumulation in rice (Oryza sativa) seedlings

Excessive use of nitrogen (N) fertilizer has increased ammonium (NH₄⁺) accumulation in many paddy soils to levels that reduce rice vegetative biomass and yield. Based on studies of NH₄⁺ toxicity in rice (Oryza sativa, Nanjing 44) seedlings cultured in agar medium, we found that NH₄⁺ concentrations above 0.75 mM inhibited the growth of rice and caused NH₄⁺ accumulation in both shoots and roots. Use of excessive NH₄⁺ also induced rhizosphere acidification and inhibited the absorption of K, Ca, Mg, Fe and Zn in rice seedlings. Under excessive NH₄⁺ conditions, exogenous γ‐aminobutyric acid (GABA) treatment limited NH₄⁺ accumulation in rice seedlings, reduced NH₄⁺ toxicity symptoms and promoted plant growth. GABA addition also reduced rhizosphere acidification and alleviated the inhibition of Ca, Mg, Fe and Zn absorption caused by excessive NH₄⁺. Furthermore, we found that the activity of glutamine synthetase/NADH‐glutamate synthase (GS; EC 6.3.1.2/NADH‐GOGAT; EC1.4.1.14) in root increased gradually as the NH₄⁺ concentration increased. However, when the concentration of NH₄⁺ is more than 3 mM, GABA treatment inhibited NH₄⁺‐induced increases in GS/NADH‐GOGAT activity. The inhibition of ammonium assimilation may restore the elongation of seminal rice roots repressed by high NH₄⁺. These results suggest that mitigation of ammonium accumulation and assimilation is essential for GABA‐dependent alleviation of ammonium toxicity in rice seedlings.     

Regulation of ammonium and potassium uptake by glutamine and asparagine in Pisum arvense plants

Pisum arvense plants were subjected to 5 days of nitrogen deprivation. Then, in the conditions that increased or decreased the root glutamine and asparagine pools, the uptake rates of 0.5 mM NH₄ ⁺ and 0.5 mM K⁺ were examined. The plants supplied with 1 mM glutamine or asparagine took up ammonium and potassium at rates lower than those for the control plants. The uptake rates of NH₄ ⁺ and K⁺ were not affected by 1 mM glutamate. When the plants were pre-treated with 100 μM methionine sulphoximine, an inhibitor of glutamine synthesis, the efflux of NH₄ ⁺ from roots to ambient solution was enhanced. On the other hand, exposure of plants to methionine sulphoximine led to an increase in potassium uptake rate. The addition of asparagine, glutamine or glutamate into the incubation medium caused a decline in the rate of NH₄ ⁺ uptake by plasma membrane vesicles isolated from roots of Pisum arvense, whereas on addition of methionine sulphoximine increased ammonium uptake. The results indicate that both NH₄ ⁺ and K⁺ uptake appear to be similarly affected by glutamine and asparagine status in root cells. The research was supported by grant of KBN No. 6PO4C 068 08     

Shewanella putrefaciens CN32对粘土附着态铵氮释放的影响

【目的】研究产胞外分泌物微生物Shewanella putrefaciens CN32对土壤中常见粘土矿物附着态NH_4~+的释放效果及影响机制。【方法】以吸附NH_4~+的蒙脱石、蛭石、伊蒙混层矿物和黑云母为对象,通过监测S. putrefaciens CN32作用下不同粘土释放的NH_4~+含量及过程,以及监测微生物量及释放的胞外聚合物(Extracellular Polymeric Substances,EPS)的含量变化,研究S. putrefaciens CN32作用下不同粘土矿物类型附着态NH_4~+释放的差异性。【结果】粘土矿物附着态NH_4~+含量从高到低依次为蒙脱石蛭石伊蒙混层矿物黑云母(黑云母NH_4~+吸附量极低,会在非生物作用下几乎完全释放),CN32作用下粘土附着态NH_4~+相对释放量依次为蒙脱石伊蒙混层矿物蛭石;然而,尽管CN32有效促进了粘土附着态NH_4~+释放,但释放的NH_4~+并未在溶液中大量累积,而是多被微生物同化吸收转化为生物有机氮(EPS为主)并吸附在粘土表面,且粘土对EPS的吸附能力表现为蒙脱石伊蒙混层矿物蛭石黑云母;由于粘土吸附NH_4~+及EPS都与矿物中的羟基(结构水或层间水)关系密切,推测EPS对矿物羟基的竞争吸附可能是CN32促进NH_4~+释放的重要原因之一。【结论】以上结果表明,产EPS微生物S. putrefaciens CN32能够促进各类粘土矿物的附着态NH_4~+释放,但释放的NH_4~+可以通过微生物作用转化为有机氮,从而在减少NH_4~+流失的同时增加土壤氮肥的生物可利用性,因此微生物在降低土壤氮肥流失、转化土壤氮肥污染过程中可能起到了重要作用,也揭示了深入系统地分析不同类型土壤(粘土类型不同)中粘土附着态NH_4~+在不同功能微生物作用下的迁移转化过程,是精准评估土壤氮肥施用效率及流失风险的前提之一。     

Replacement of potassium ions by ammonium ions in different micro-organisms grown in potassium-limited chemostat culture

The biomass concentration extant in potassiumlimited cultures of either Klebsiella pneumoniae or Bacillus stearothermophilus (when growing at a fixed temperature and dilution rate in a glucose/ammonium salts medium) increased progressively as the medium pH value was raised step-wise from 7.0 to 8.5. Because the macromolecular composition of the organisms did not vary significantly, this increase in biomass could not be attributed to an accumulation of storage-type polymers but appeared to reflect a pH-dependent decrease in the cells' minimum K⁺ requirement. Significantly, this effect of pH was not eviden with cultures in which no ammonium salts were present and in which either glutamate or nitrate was added as the sole nitrogen source; however, it was again manifest when various concentrations of NH₄Cl were added to the glutamate-containing medium. This suggested a functional replacement of K⁺ by NH ₄ ⁺ , a proposition consistent with the close similarity of the ionic radii of the potassium ion (1.33 Å) and the ammonium ion (1.43 Å). At pH 8.0, and with a medium containing both glutamate (30 mM) and NH₄Cl (100 mM), cultures of B. stearothermophilus would grow without added potassium at a maximum rate of 0.7 h^-1. Under these conditions the cells contained maximally 0.1% (w/w) potassium (derived from contaminating amounts of this element in the medium constituents), a value which should be compared with one of 1.4% (w/w) for cells growing in a potassiumlimited medium containing initially 0.5 mM K⁺. Qualitatively similar findings were made with cultures of K. pneumoniae; and whereas one may not conclude that NH ₄ ⁺ can totally replace K⁺ in the growth of these bacteria, it can clearly do so very extensively.     

Amino acid abundance and proteolytic potential in North American soils

Studies of nitrogen (N) cycling have traditionally focused on N mineralization as the primary process limiting plant assimilation of N. Recent evidence has shown that plants may assimilate amino acids (AAs) directly, circumventing the mineralization pathway. However, the general abundance of soil AAs and their relative importance in plant N uptake remains unclear in most ecosystems. We compared the concentrations and potential production rates of AAs and NH₄ ⁺, as well as the edaphic factors that influence AA dynamics, in 84 soils across the United States. Across all sites, NH₄ ⁺ and AA-N comprised similar proportions of the total bioavailable N pool (~20%), with NO₃ ⁻ being the dominant form of extractable N everywhere but in tundra and boreal forest soils. Potential rates of AA production were at least comparable to those of NH₄ ⁺ production in all ecosystems, particularly in semi-arid grasslands, where AA production rates were six times greater than for NH₄ ⁺ (P < 0.01). Potential rates of proteolytic enzyme activity were greatest in bacteria-dominated soils with low NH₄ ⁺ concentrations, including many grassland soils. Based on research performed under standardized laboratory conditions, our continental-scale analyses suggest that soil AA and NH₄ ⁺ concentrations are similar in most soils and that AAs may contribute to plant and microbial N demand in most ecosystems, particularly in ecosystems with N-poor soils.     

Dissolved Inorganic Nitrogen Pools and Surface Flux under Different Brackish Marsh Vegetation Types,Common Reed (<Emphasis Type="Italic">Phragmites australis</Emphasis>) and Salt Hay (<Emphasis Type="Italic">Spartina patens</Emphasis>)

The current expansion of Phragmites australis into the high marsh shortgrass (Spartina patens, Distichlis spicata) communities of eastern U.S. salt marshes provided an opportunity to identify the influence of vegetation types on pools and fluxes of dissolved inorganic nitrogen (DIN). Two brackish tidal marshes of the National Estuarine Research Reserve system were examined, Piermont Marsh of the Hudson River NERR in New York and Hog Island in the Jacques Coustaeu NERR of New Jersey. Pools of DIN in porewater and rates of DIN surface flux were compared in replicated pairs of recently-expanded P. australis and neighboring S. patens-dominated patches on the high marsh surface. Both marshes generally imported nitrate (NO₃⁻) and exported ammonium (NH₄⁺), such that overall DIN was exported. No differences in surface exchange of NO₃⁻ or NH₄⁺ were observed between vegetation types. Depth-averaged porewater NH₄⁺ concentrations over the entire growing season were 56% lower under P. australis than under S. patens (average 1.4 vs. 3.2 mg NH₄⁺ L⁻¹) with the most profound differences in November. Porewater profiles showed an accumulation of NH₄⁺ at depth in S. patens and constant low concentrations in P. australis from the soil surface to 50 cm depth, with no significant differences in porewater salinity. Despite these profound differences in porewater, NH₄⁺ diffusion from soils of P. australis and S. patens were not measurably different, were similar to other published rates, and were well below estimated rates based on passive diffusion alone. Rapid adsorption and uptake by litter and microbes in surface soils of both communities may buffer NH₄⁺ loss to flooding tides in both communities, thereby reducing the impact of P. australis invasion on NH₄⁺ flux to flooding waters.     

Effect of nitrogen form and phosphorus source on the growth,nutrient uptake and rhizosphere soil property of Camellia sinensis L.

The effects of nitrogen form and phosphorus source on the growth, nutrient uptake and rhizosphere soil property of tea (Camellia sinensis L.) were investigated in a pot experiment. The experiment was performed with a compartmental cropping device, which enables the collection of rhizosphere soil at defined distances from the root of tea plant. Nitrogen was supplied as nitrate or ammonium in combination with soluble phosphorus as Ca(H₂PO₄)₂ or insoluble P as rock phosphate. The leaf dry matter production of tea was significantly greater in the treatments with NH₄ ⁺ than NO₃ ^-, whereas dry matter production of root and stem was not significantly affected. Addition of phosphorus as either source did not influence the dry matter production. The concentrations of K in root, Mg and Ca in both the shoot and root supplied with NO₃ ^- were significantly higher than in NH₄ ⁺ and influence of P sources was minor. On the contrary, Al and Mn concentrations were significantly larger in NH₄ ^--fed plants which could be attributed to remarkably increased availability of Al and Mn caused by acidification of the rhizosphere soil (the first 1-mm soil section from the root surface) with NH₄–N nutrition. The concentration of N in shoot was also significantly higher in NH₄- than in NO₃-fed plants, indicating higher use efficiency of NH₄–N. Whatever the phosphate source, rhizosphere pH declined in ammonium compared to in nitrate treatment. The pH decrease was much larger when no P or soluble P were applied and reached 0.85–1.30 units which extended to 3–5 mm away from the root surface. Exchangeable acidity, content of exchangeable Al and Mn were also considerably higher in the rhizosphere soils of NH₄ ⁺ fed tea plants. Significant amounts of P dissolved from rock phosphate accumulated in rhizosphere of NH₄ ⁺, not NO₃ ^-, suggesting that the dissolution of rock phosphate was induced by the proton excreted by tea root fed with ammonium. With soluble P addition, shoot and root P concentrations were greater in NH₄ ⁺ than in NO₃ ^- treatment and it appeared that this difference could not be sufficiently explained by the available P content in soil which was only slightly higher in NH₄ ⁺ treatment. With rock phosphate addition, the shoot and root P concentrations were hardly affected by nitrogen form, although the available P content was much higher and accumulated in the rhizosphere soil supplied with ammonium. The reason for this was discussed with regard to the inter-relationship of Al with P uptake. This revised version was published online in June 2006 with corrections to the Cover Date.     

Crop utilization and fixation of added ammonium in soils of the West Indies

NH₄ ⁺-fixation by inorganic and organic soil components and crop utilization of fertilier nitrogen was studied in a number of Carbbean soils using¹⁵N fertilizers. At moderate rates of nitrogen application, NH₄ ⁺-fixation by clays during several-week laboratory incubations was rapid and highly vaiable, ranging from less than 10% to over 70% of the NH₄ ⁺ added. The 2: 1 lattice types were the most reactive, and the process were almost complete by one week after fertilization. Fixation increased with rate of NH₄ ⁺-N application and was higher at elevated temperatures in soils that were allowed to air-dry during incubation. NH₄ ⁺-N fixation was more active in the fulvic fractions of the soil organic matter than in the humuc fractions (25–69%vs0–3% of the added NH₄ ⁺ was fixed in each, respectively). There was little incorporation of fertilizer-N by the N-containing fractions of soil organic matter. Plant uptake of added NH₄ ⁺-N in greenhouse pot experiments showed that a greater percentalte of fertilizer-N was taken up by Sudan grass (Sourghum sudanese) at a fertilizer rate of 40 kg NH₄ ⁺-N ha^?1 than at a rate of 200n kg NH₄ ⁺N ha^?1. howver, the recovery was low, ranging from 10 to 25 percent of that applied. In field experiments with maize (Zea mays), urea-N was rapidly lost when applied to soils in a wet tropical environment. At normal rates of application (100 kg urea-N ha^?1) only about half of the fertilizer was utilized by the crop. Mulches did not significantly affect the fate of added nitrogen; however, mulching did result in increased yields for dry-season cropping, due probably to water conservation effects. There is good indication that for conditions in Trinidad, NH₄ ⁺-N is better utilzed and less subject to unidentified losses than is urea. Addition of fertilizer-N resulted in crop uptake of important quantities of native soil nitrogen. The Caribbean Andepts were outstanding in that the showed very little NH₄ ⁺-fixation under all experimental conditions and very little tendency for apparent nitrification of added NH₄ ⁺-N.     

Biochar Effectively Reduces Ammonia Volatilization From Nitrogen-Applied Soils in Tea and Bamboo Plantations

Intensive practices in forest soils result in dramatic nitrogen (N) losses, particularly ammonia (NH₃) volatilization, to adjacent environmental areas. A soil column experiment was conducted to evaluate the effect of bamboo biochar on NH₃ volatilization from tea garden and bamboo forest soils. The results showed that biochar amendment effectively reduced NH₃ volatilization from tea garden and bamboo forest soil by 79.2% and 75.5%, respectively. The soil pH values increased by 0.53-0.61 units after biochar application. The NH₄⁺-N and total N of both soils were 13.8-29.7% and 34.0-41.9% higher under the biochar treatments than under the control treatment, respectively. In addition, the soil water contents of the two biochar-amended soils were significantly higher (P < 0.05), by 10.7-12.5%, than that of the soils without biochar amendment. Therefore, biochar mitigates NH₃ volatilization from the tested forest soils, which was due to the increases in soil NH₄⁺-N, total N and water contents after biochar amendment. Our main findings suggest that biochar addition is an effective management option for sustainable forest management.     

Effects of forest fertilization on nitrogen leaching and soil microbial properties in the Northern Calcareous Alps of Austria

Several boreal and alpine forests are depleted in nutrients due to acidification. Fertilization may be a remedy, but rapidly-soluble salts (N, P, K, Mg) may pose nitrate problems for the groundwater or decrease microbial activity.With the aim to investigate potential nitrogen leaching after fertilization we set up an experiment employing intact soil cores (11 cm diameter, 20–40 cm long) from a mixed forest and a Picea abies stand (soil type Rendsina) in the Northern Calcareous Alps of Austria. The cores were fertilized with a commercial NPK fertilizer or a methylene-urea-apatite-biotite (MuAB) fertilizer at a rate corresponding to 300 kg N ha^-1 and incubated for 28 weeks together with unfertilized controls. Both soil water (retrieved 5 cm below the soil surface) and leachate were analyzed for nitrate and ammonium in regular intervals. After the incubation, soil microbial biomass and basal repiration were determined and a nitrogen mineralization assay was performed.For the control, in the soil water and leachate maximum NH₄ ⁺ and NO₃ ^- concentrations of 5 and 11 mg N L^-1, respectively, were found. Compared to that, MuAB fertilizer resulted in a slow increase of NH₄ ⁺ and NO₃ ^- in the soil water (up to 11 and 35 mg N L^-1 respectively) and in the leachate (4 mg NH₄ ⁺-N L^-1 and 44 mg NO₃ ^--N L^-1). Highest nitrogen loads were found for the fast release NPK fertilizer, with NH₄ ⁺ and NO₃ ^- concentrations up to 170 and 270 mg N L^-1, respectively, in the soil water. NH₄ ⁺-N levels in the leachate remained below 5, while NO₃-N levels were up to 190 mg L^-1. Fast- release NPK caused a significant decrease of microbial biomass and basal respiration. These parameters were not affected by MuAB fertilizer.The results suggest that the MuAB fertilizer may be an ecologically appropriate alternative to fast-release mineral fertilizers for improving forest soils.     

Rapid determination of EUF-extractable nitrogen and boron

Summary A procedure for the rapid determination of EUF-extractable nitrogen (NH₄ ⁺, NO₃ ⁻ and easily soluble organic N compounds) is described. In this procedure the EUF-N fractions are oxidized to NO₃. The oxidation with peroxodisulfate is accelerated by ultraviolet (UV) radiation. This reduces the time of digestion to about 15 minutes. The contents of EUF-extractable N are on the average only between 2–8 mg/100 g soil. Their determination by the new procedure in the form of NO₃ is more precise than the results obtained by digestion according to Kjeldahl. The sum of EUF-extractable N fractions obtained by the new procedure allows to assess the N fertilizer requirements more precisely than is possible when using the EUF-NO₃ fractions alone. Therefore this new procedure constitutes a considerable advantage when working out fertilizer recommendations for agricultural practice.     

Effect of soil heterogeneity on gross nitrogen mineralization measured by 15N-pool dilution techniques

Pool dilution techniques, where the soil ammonium pool is labeled with ¹⁵NH₄ ⁺, are commonly used to estimate gross N mineralization rates in soil. To estimate the rates unbiased, it is assumed that the ¹⁵NH₄ ⁺ is distributed homogenously in ambient ¹⁴NH₄ ⁺ pool of the soil. However, completely homogeneous distribution of ¹⁵NH₄ ⁺ may commonly not be feasible. The objective of this paper was to examine the importance of the spatial distribution of ¹⁴NH₄ ⁺ and ¹⁵NH₄ ⁺ on the measured gross N mineralization rate. In a 2-day incubation experiment, gross N mineralization rates were measured in soil, where different distributions of ¹⁴NH₄ ⁺ and ¹⁵NH₄ ⁺ were combined. Generally, distribution of ¹⁵NH₄ ⁺ to 50% of the soil volume did not alter the measured gross mineralization rate however more heterogeneous distribution caused the rate to be underestimated. Certain combinations of ¹⁴NH₄ ⁺ and ¹⁵NH₄ ⁺ distributions caused the rate to be overestimated. Based on the experimental results, we developed a 2-dimensional model array of soil compartments, to estimate the gross N mineralization and gross NH₄ ⁺ consumption rates in local microsites in the soil. If one of the nitrogen-isotopes was more abundant in a compartment with high NH₄ ⁺-concentration, and the other nitrogen-isotope was more abundant in a compartment with low NH₄ ⁺-concentration, the nitrogen-isotopes would have different apparent bioavailability, hence the gross N mineralization rate would be erroneously estimated. On the other hand, in soil where all compartments had low NH₄ ⁺-concentrations, heterogeneous distribution of ¹⁴NH₄ ⁺, ¹⁵NH₄ ⁺ and microbial activity did not influence the measured gross N mineralization rate significantly.     

Mangrove soils as sinks for wastewater-borne pollutants

Soil column leaching experiments were conducted to assess the retention of nutrients and heavy metals in two types of mangrove soils receiving strong wastewater throughout a period of 5 months. NH₄ ⁺-N was the dominant form of nitrogen, nitrite and nitrate were in relatively low concentrations in all leachate collected. The concentrations of NH₄ ⁺-N in leachate collected from columns packed with Sai Keng of Hong Kong mangrove soil were higher than those packed with soils collected from Shenzhen of China. The leachate NH₄ ⁺-N contents of Shenzhen columns were significantly lower than that of the synthetic wastewater even at the end of the experimental period, indicating Shenzhen soils had very high capacity to bind nitrogen, and the amount of ammonium added from wastewater did not exceed the binding capacity of mangrove soil. The data also suggest that soils collected from Shenzhen mangrove swamp had higher capacity in retaining wastewater nitrogen than the Sai Keng soils. In contrast, leachate from Sai Keng columns had significantly lower ortho-P contents than those from Shenzhen columns. Actually, the leachate P concentrations of the Sai Keng columns treated with wastewater were similar to those receiving seawater (< 0.1 mg l^–). This finding implies Sai Keng soils were very effective in retaining wastewater P. Throughout the experiment, most heavy metals, including Cu, Zn, Cd, Ni and Cr were not detected in all leachate samples by flame atomic absorption spectrophotometry, indicating that both types of mangrove soils were capable of trapping wastewater-borne heavy metals. The study demonstrates that mangrove soils were good traps to immobilize wastewater-borne phosphorus and heavy metals but they were less efficient in retaining nitrogen from wastewater.     

Intracellular measurement of ammonium in Chara corallina using ion-selective microelectrodes

The study of ammonium (NH₄ ⁺) transport across plant cell membranes requires accurate measurement of NH₄ ⁺ gradients across subcellular gradients. We have developed an ammonium-selective microelectrode based on the ionophore nonactin. This electrode can detect NH₄ ⁺ activities (a_NH4) in vivo in the millimolar range in the presence of cytosolic levels of potassium, the main interfering ion. The electrode was used to measure intracellular a_NH4 in internodal cells of the giant alga Chara corallina. Results from cells incubated in media supplemented with 1 mM NH₄ ⁺ produced two populations, with means of 7.3 and 30.8 mM, respectively. HPLC analysis of vacuolar sap suggests the higher population represents vacuolar impalements, and the lower population can thus be assumed to be cytosolic. These results suggest a four-fold accumulation of NH₄ ⁺ in the vacuolar compartment of Chara. This revised version was published online in June 2006 with corrections to the Cover Date.     

Low Nitrification Rates in Acid Scots Pine Forest Soils Are Due to pH-Related Factors

In a previous study, ammonia-oxidizing bacteria (AOB)-like sequences were detected in the fragmentation layer of acid Scots pine (Pinus sylvestris L.) forest soils (pH 2.9–3.4) with high nitrification rates (>11.0 μg g⁻¹ dry soil week⁻¹), but were not detected in soils with low nitrification rates (<0.5 μg g⁻¹ dry soil week⁻¹). In the present study, we investigated whether this low nitrification rate has a biotic cause (complete absence of AOB) or an abiotic cause (unfavorable environmental conditions). Therefore, two soils strongly differing in net nitrification were compared: one soil with a low nitrification rate (location Schoorl) and another soil with a high nitrification rate (location Wekerom) were subjected to liming and/or ammonium amendment treatments. Nitrification was assessed by analysis of dynamics in NH₄ ⁺-N and NO₃ ⁻-N concentrations, whereas the presence and composition of AOB communities were assessed by polymerase chain reaction–denaturing gradient gel electrophoresis and sequencing of the ammonia monooxygenase (amoA) gene. Liming, rather than ammonium amendment, stimulated the growth of AOB and their nitrifying activity in Schoorl soil. The retrieved amoA sequences from limed (without and with N amendment) Schoorl and Wekerom soils exclusively belong to Nitrosospira cluster 2. Our study suggests that low nitrification rates in acidic Scots pine forest soils are due to pH-related factors. Nitrosospira cluster 2 detected in these soils is presumably a urease-positive cluster type of AOB.     

Surface attachment of nitrifying bacteria and their inhibition by potassium ethyl xanthate

Ion exchange resins and glass microscope slides were used to investigate factors affecting attachment of nitrifying bacteria to solid surfaces and the effect of attachment on inhibition ofNitrobacter by potassium ethyl xanthate. The ammonium oxidizerNitrosomonas attached preferentially to cation exchange resins while the nitrite oxidizerNitrobacter colonized anion exchange resins more extensively. Colonization was always associated with growth, and the site of substrate (NH₄ ⁺ or NO₂ ^–) adsorption was the major factor in attachment and colonization. The specific growth rate of cells colonizing either ion exchange resin beads or glass surfaces was greater than that of freely suspended cells, butNitrobacter populations colonizing glass surfaces were more sensitive to the inhibitor potassium ethyl xanthate. The findings indicate that surface growth alone does not protect soil nitrifying bacteria from inhibition by potassium ethyl xanthate and explain different patterns of inhibition for ammonium and nitrite oxidizers in the soil.     

Assessing the Impact of Iron-based Nanoparticles on pH,Dissolved Organic Carbon,and Nutrient Availability in Soils

With the ongoing commercialization of nanotechnology products, the increasing use of engineered nanoparticles (NPs) could lead potentially to environmental risks. This study investigated the dynamic influences of three iron-based NPs (Fe⁰, Fe₃O₄, and Fe₂O₃) applied into a red soil (RS) and a Wushan soil (WS) with different application rates (2 to 6 g kg^?1) on soil physicochemical properties such as pH, dissolved organic carbon (DOC), available ammonium nitrogen (NH₄ ⁺-N), available phosphorus (AP), and enzymatic activities. The results showed that the addition of Fe⁰ NPs increased DOC and available NH₄ ⁺-N, but significantly decreased AP, while Fe₃O₄ and Fe₂O₃ NPs slightly reduced soil pH in both soils and significantly declined available NH₄ ⁺-N in the WS and AP in the RS. No significant difference was observed between the effects of Fe₃O₄ and Fe₂O₃ NPs on soil properties except AP in the RS. All iron-based NPs decreased the activities of urease and acid phosphatase in both soils. The effects on soil physicochemical properties, especially available NH₄ ⁺-N and AP induced by iron-based NPs, varied greatly with soil types. These results implied that cautions should be paid for the environmental application of iron-based NPs, especially iron oxide NPs in soils.