Distribution of surface zooplankton and seabirds across the Southern Ocean

Surface zooplankton and seabird densities and community composition in the Atlantic (between Cape Town and Sanae) and Pacific (between New Zealand and the Ross Sea) sectors of the Southern Ocean are described and related to oceanographic features. Samples were collected during two return voyages aboard the MV Benjamin Bowring as part of the Transglobe Expedition (1979–1981). High abundances of surface zooplankton and seabirds were consistently observed within the main frontal systems of the Southern Ocean. Generally, on a mesoscale significant correlations between surface temperature and the distribution of zooplankton or seabirds were observed. On a macroscale, the geographical positions of the zooplankton and seabird communities coincided with specific water masses. The results of this study suggest that appropriate food availability rather than water temperature is important for the determination of seabird distribution. The ecological importance of the recently described frontal zone associated with the northern boundary of the maximum winter expansion of sea ice is confirmed by biological data obtained in this study.     

Bacterioplankton in Antarctic Ocean Waters During Late Austral Winter: Abundance, Frequency of Dividing Cells, and Estimates of Production

Bacterioplankton productivity in Antarctic waters of the eastern South Pacific Ocean and Drake Passage was estimated by direct counts and frequency of dividing cells (FDC). Total bacterioplankton assemblages were enumerated by epifluorescent microscopy. The experimentally determined relationship between in situ FDC and the potential instantaneous growth rate constant (μ) is best described by the regression equation ln μ = 0.081 FDC − 3.73. In the eastern South Pacific Ocean, bacterioplankton abundance (2 × 10⁵ to 3.5 × 10⁵ cells per ml) and FDC (11%) were highest at the Polar Front (Antarctic Convergence). North of the Subantarctic Front, abundance and FDC were between 1 × 10⁵ to 2 × 10⁵ cells per ml and 3 to 5%, respectively, and were vertically homogeneous to a depth of 600 m. In Drake Passage, abundance (10 × 10⁵ cells per ml) and FDC (16%) were highest in waters south of the Polar Front and near the sea ice. Subantarctic waters in Drake Passage contained 4 × 10⁵ cells per ml with 4 to 5% FDC. Instantaneous growth rate constants ranged between 0.029 and 0.088 h⁻¹. Using estimates of potential μ and measured standing stocks, we estimated productivity to range from 0.62 μg of C per liter · day in the eastern South Pacific Ocean to 17.1 μg of C per liter · day in the Drake Passage near the sea ice.     

Major Role of Microbes in Carbon Fluxes during Austral Winter in the Southern Drake Passage

Carbon cycling in Southern Ocean is a major issue in climate change, hence the need to understand the role of biota in the regulation of carbon fixation and cycling. Southern Ocean is a heterogeneous system, characterized by a strong seasonality, due to long dark winter. Yet, currently little is known about biogeochemical dynamics during this season, particularly in the deeper part of the ocean. We studied bacterial communities and processes in summer and winter cruises in the southern Drake Passage. Here we show that in winter, when the primary production is greatly reduced, Bacteria and Archaea become the major producers of biogenic particles, at the expense of dissolved organic carbon drawdown. Heterotrophic production and chemoautotrophic CO₂ fixation rates were substantial, also in deep water, and bacterial populations were controlled by protists and viruses. A dynamic food web is also consistent with the observed temporal and spatial variations in archaeal and bacterial communities that might exploit various niches. Thus, Southern Ocean microbial loop may substantially maintain a wintertime food web and system respiration at the expense of summer produced DOC as well as regenerate nutrients and iron. Our findings have important implications for Southern Ocean ecosystem functioning and carbon cycle and its manipulation by iron enrichment to achieve net sequestration of atmospheric CO₂.     

Trophic cascading in the Polar Frontal Zone of the Southern Ocean during austral autumn 2002

Trophic cascading resulting from coupling among phytoplankton, protozooplankton (2–200 µm) and the mesozooplankton fractions <1,000 µm and <2,000 µm was investigated at three stations in the Polar Frontal Zone of the Southern Ocean during austral autumn 2002. In the absence of any grazers, net growth rate of the phytoplankton was positive and ranged between 0.209 and 0.402 day^–1. Among the heterotrophic components of the zooplankton, protozooplankton were identified as the most important consumers of the phytoplankton biomass. The low impact of the mesozooplankton on the phytoplankton may have been related to the inability of the larger grazers to feed efficiently on the small phytoplankton cells, which dominated the total chlorophyll concentration at two of the three sampling stations. It appears that the mesozooplankton <1,000 µm consumed protozooplankton, which resulted in a decrease in the impact of the latter organisms on the phytoplankton. The presence of predatory zooplankton (mainly chaetognaths and amphipods) >1,000 µm led to a decrease in the carnivory of the <1,000-µm mesozooplankton fraction on the protozooplankton. In this situation, protozooplankton were again able to exert a considerable impact on the phytoplankton.     

Trophodynamics of selected mesozooplankton in the west-Indian sector of the Polar Frontal Zone, Southern Ocean

Mesozooplankton community structure and grazing impact were investigated at 15 stations in the west-Indian sector of the Polar Frontal Zone during the third dynamics of Eddie impacts on Marions ecosystem cruise, conducted during April 2004. An intense frontal feature, likely the convergence of the Sub-Antarctic and Antarctic Polar Fronts, was identified running in a north-eastward direction across the survey area. Total integrated chlorophyll-a (chl-a) biomass ranged from 4.15 mg m^–2 to 22.81 mg m^–2 and was dominated by picophytoplankton at all stations. Mesozooplankton abundances ranged from 163.84 ind m^–2 to 2,478.08 ind m^–2 and biomass between 6.70 mg Dwt. m^–2 and 23.40 mg Dwt. m^–2. The mesozooplankton community was dominated almost entirely by copepods, which contributed between 35% and 79% (mean=63%; SD=±12%) of the total numbers. The pteropoda, Limacina retroversa, contributed up to 30% (mean=10%; SD=± 8%) of the total numbers. Numerical analysis identified two distinct mesozooplankton communities separated by the intense frontal feature, namely the Antarctic and the Sub-Antarctic Zone Groups. Ingestion rates of the four numerically dominant copepod species (Calanus simillimus, Clausocalanus spp., Ctenocalanus spp. and Oithona similis) and the pteropod, L. retroversa, were estimated using the gut fluorescence technique. Total grazing impact ranged from 0.156 mg (pigm) m^–2 to 2.958 mg (pigm) m^–2 or between 1% and 29% of the available chl-a per day. The four copepods contributed approximately 36% of the total daily grazing impact, while the pteropod contributed to a mean of 64%, indicating that this zooplankton group may play an important role in the Southern Ocean carbon cycle. In general, the highest daily grazing impact was exhibited in the Antarctic Zone Group (mean=12% phytoplankton standing stock per day).     

Oxygen and the Spatial Structure of Microbial Communities

Oxygen has two faces. On one side it is the terminal electron acceptor of aerobic respiration – the most efficient engine of energy metabolism. On the other hand, oxygen is toxic because the reduction of molecular O₂ creates reactive oxygen species such as the superoxide anion, peroxide, and the hydroxyl radical. Probably most prokaryotes, and virtually all eukaryotes, depend on oxygen respiration, and we show that the ambiguous relation to oxygen is both an evolutionary force and a dominating factor driving functional interactions and the spatial structure of microbial communities.We focus on microbial communities that are specialised for life in concentration gradients of oxygen, where they acquire the full panoply of specific requirements from limited ranges of PO₂ , which also support the spatial organisation of microbial communities. Marine and lake sediments provide examples of steep O₂ gradients, which arise because consumption or production of oxygen exceeds transport rates of molecular diffusion. Deep lakes undergo thermal stratification in warm waters, resulting in seasonal anaerobiosis below the thermocline, and lakes with a permanent pycnocline often have permanent anoxic deep water. The oxycline is here biologically similar to sediments, and it harbours similar microbial biota, the main difference being the spatial scale. In sediments, transport is dominated by molecular diffusion, and in the water column, turbulent mixing dominates vertical transport.Cell size determines the minimum requirement of aerobic organisms. For bacteria (and mitochondria), the half‐saturation constant for oxygen uptake ranges within 0.05 – 0.1% atmospheric saturation; for the amoeba Acanthamoeba castellanii it is 0.2%, and for two ciliate species measuring around 150 μm, it is 1‐2 % atmospheric saturation. Protection against O₂ toxicity has an energetic cost that increases with increasing ambient O₂ tension. Oxygen sensing seems universal in aquatic organisms. Many aspects of oxygen sensing are incompletely understood, but the mechanisms seem to be evolutionarily conserved. A simple method of studying oxygen preference in microbes is to identify the preferred oxygen tension accumulating in O₂ gradients. Microorganisms cannot sense the direction of a chemical gradient directly, so they use other devices to orient themselves. Different mechanisms in different prokaryotic and eukaryotic microbes are described. In O₂ gradients, many bacteria and protozoa are vertically distributed according to oxygen tension and they show a very limited range of preferred PO₂. In some pigmented protists the required PO₂ is contingent on light due to photochemically generated reactive oxygen species. In protists that harbour endosymbiotic phototrophs, orientation towards light is mediated through the oxygen production of their photosynthetic symbionts. Oxygen plays a similar role for the distribution of small metazoans (meiofauna) in sediments, but there is little experimental evidence for this. Thus the oxygenated sediments surrounding ventilated animal burrows provide a special habitat for metazoan meiofauna as well as unicellular organisms.     

Spatial Distribution of Biochemical Parameters Indicating Biomass and Community Composition of Microbial Assemblies In Estuarine Mud Flat Sediments

The spatial distribution of communities was examined in estuarine mud flat sediments by the biochemical analysis of the lipids and lipid components extracted from the sediments. Total phospholipid was used as a measure of total biomass, and fatty acids were used as indicators of community composition. Comparisons were made among 2- by 2-m (location) and 0.2- by 0.2-m (cluster) sampling plots by using a nested analysis of variance to design an optimal sampling strategy to define the microbial content of a large, relatively homogenous area. At two of the three stations, a 2- by 2-m plot was representative of the station, but 0.2- by 0.2-m areas were in no case representative of the station. The biomass measured by the extractable phospholipid and the total lipid palmitic acid showed excellent correlation with the fatty acid “signatures” characteristic of bacteria, but showed a lower correlation with the long-chain polyenoic fatty acids characteristic of the microfauna.     

Activity and distribution of diazotrophic communities across the Cape Verde Frontal Zone in the Northeast Atlantic Ocean

Biogeochemistry - We investigated dinitrogen (N2) fixation activity and diazotroph community composition across the Cape Verde Frontal Zone (CVFZ), from photic epipelagic waters (0-200&nbsp;m)...     

The Heterogeneity and Spatial Patterning of Structure and Physiology across the Leaf Surface in Giant Leaves of Alocasia macrorrhiza

Leaf physiology determines the carbon acquisition of the whole plant, but there can be considerable variation in physiology and carbon acquisition within individual leaves. Alocasia macrorrhiza (L.) Schott is an herbaceous species that can develop very large leaves of up to 1 m in length. However, little is known about the hydraulic and photosynthetic design of such giant leaves. Based on previous studies of smaller leaves, and on the greater surface area for trait variation in large leaves, we hypothesized that A. macrorrhiza leaves would exhibit significant heterogeneity in structure and function. We found evidence of reduced hydraulic supply and demand in the outer leaf regions; leaf mass per area, chlorophyll concentration, and guard cell length decreased, as did stomatal conductance, net photosynthetic rate and quantum efficiency of photosystem II. This heterogeneity in physiology was opposite to that expected from a thinner boundary layer at the leaf edge, which would have led to greater rates of gas exchange. Leaf temperature was 8.8°C higher in the outer than in the central region in the afternoon, consistent with reduced stomatal conductance and transpiration caused by a hydraulic limitation to the outer lamina. The reduced stomatal conductance in the outer regions would explain the observed homogeneous distribution of leaf water potential across the leaf surface. These findings indicate substantial heterogeneity in gas exchange across the leaf surface in large leaves, greater than that reported for smaller-leafed species, though the observed structural differences across the lamina were within the range reported for smaller-leafed species. Future work will determine whether the challenge of transporting water to the outer regions can limit leaf size for plants experiencing drought, and whether the heterogeneity of function across the leaf surface represents a particular disadvantage for large simple leaves that might explain their global rarity, even in resource-rich environments.     

Microbial Biomass, Community Structure and Metal Tolerance of a Naturally Pb-Enriched Forest Soil

The effect of long-term elevated soil Pb levels on soil microbiota was studied at a forest site in Norway, where the soil has been severely contaminated with Pb since the last period of glaciation (several thousand years). Up to 10% Pb (total amount, w/w) has been found in the top layer. The microbial community was drastically affected, as judged from changes in the phospholipid fatty acid (PLFA) pattern. Specific PLFAs that were high in Pb-enriched soil were branched (especially br17:0 and br18:0), whereas PLFAs common in eukaryotic organisms such as fungi (18:2ω6,9 and 20:4) were low compared with levels at adjacent, uncontaminated sites. Congruent changes in the PLFA pattern were found upon analyzing the culturable part of the bacterial community. The high Pb concentrations in the soil resulted in increased tolerance to Pb of the bacterial community, measured using both thymidine incorporation and plate counts. Furthermore, changes in tolerance were correlated to changes in the community structure. The bacterial community of the most contaminated soils showed higher specific activity (thymidine and leucine incorporation rates) and higher culturability than that of control soils. Fungal colony forming units (CFUs) were 10 times lower in the most Pb-enriched soils, the species composition was widely different from that in control soils, and the isolated fungi had high Pb tolerance. The most commonly isolated fungus in Pb-enriched soils was Tolypocladium inflatum. Comparison of isolates from Pb-enriched soil and isolates from unpolluted soils showed that T. inflatum was intrinsically Pb-tolerant, and that the prolonged conditions with high Pb had not selected for any increased tolerance.     

Temporal and Spatial Distribution of the Microbial Community of Winogradsky Columns

Winogradsky columns are model microbial ecosystems prepared by adding pond sediment to a clear cylinder with additional supplements and incubated with light. Environmental gradients develop within the column creating diverse niches that allow enrichment of specific bacteria. The enrichment culture can be used to study soil and sediment microbial community structure and function. In this study we used a 16S rRNA gene survey to characterize the microbial community dynamics during Winogradsky column development to determine the rate and extent of change from the source sediment community. Over a period of 60 days, the microbial community changed from the founding pond sediment population: Cyanobacteria, Chloroflexi, Nitrospirae, and Planctomycetes increased in relative abundance over time, while most Proteobacteria decreased in relative abundance. A unique, light-dependent surface biofilm community formed by 60 days that was less diverse and dominated by a few highly abundant bacteria. 67–72% of the surface community was comprised of highly enriched taxa that were rare in the source pond sediment, including the Cyanobacteria Anabaena, a member of the Gemmatimonadetes phylum, and a member of the Chloroflexi class Anaerolinea. This indicates that rare taxa can become abundant under appropriate environmental conditions and supports the hypothesis that rare taxa serve as a microbial seed bank. We also present preliminary findings that suggest that bacteriophages may be active in the Winogradsky community. The dynamics of certain taxa, most notably the Cyanobacteria, showed a bloom-and-decline pattern, consistent with bacteriophage predation as predicted in the kill-the-winner hypothesis. Time-lapse photography also supported the possibility of bacteriophage activity, revealing a pattern of colony clearance similar to formation of viral plaques. The Winogradsky column, a technique developed early in the history of microbial ecology to enrich soil microbes, may therefore be a useful model system to investigate both microbial and viral ecology.     

Distribution and demography of Antarctic krill in the Southeast Atlantic sector of the Southern Ocean during the austral summer 2008

This study documents horizontal distribution and demography of Antarctic krill (Euphausia superba) from the Southern Ocean during January–March 2008. The cruise predominantly occurred in CCAMLR Subarea 48.6, where knowledge about the ecosystem is limited. E. superba were not found north of 52°S. The biomass, estimated from trawl catches, was highest (63.09 g/m²) at a station 680 km southeast of Bouvetøya and at two stations 1,400 and 600 km southeast and southwest of Bouvetøya, 54.67 and 61.38 g/m², respectively. Body length ranged from 19 to 61 mm (N = 8,538), with a mean of 42.0 ± 6.4 mm (SD). The overall sex ratio was 1:1, 46.2% males (13.2% adults and 33.0% subadults), 46.1% females (33.6% adults and 12.5% subadults), while 7.5% were juveniles. Trawl stations dominated by adults were found west and north of Bouvetøya. Stations with high proportions of subadults and juveniles were mainly found southeast of the island. Four cluster groups were differentiated: analyzing data on krill sex proportions, maturity stages, hydrography, nutrients and chlorophyll concentrations. Two groups represented stations located in the northern part of the study area, where E. superba were absent; water temperatures were higher and the nutrient concentrations lower compared to the groups where E. superba were present. This study shows that bathymetric features like the North Weddell Ridge including Bouvetøya are important for concentrating krill probably due to water mass characteristics and advective processes which influence regional krill demography. The southern regions of CCAMLR sector 48.6 are essential for understanding regional krill recruitment and production.     

Diversity and Distribution of Marine Microbial Eukaryotes in the Arctic Ocean and Adjacent Seas

We analyzed microbial eukaryote diversity in perennially cold arctic marine waters by using 18S rRNA gene clone libraries. Samples were collected during concurrent oceanographic missions to opposite sides of the Arctic Ocean Basin and encompassed five distinct water masses. Two deep water Arctic Ocean sites and the convergence of the Greenland, Norwegian, and Barents Seas were sampled from 28 August to 2 September 2002. An additional sample was obtained from the Beaufort Sea (Canada) in early October 2002. The ribotypes were diverse, with different communities among sites and between the upper mixed layer and just below the halocline. Eukaryotes from the remote Canada Basin contained new phylotypes belonging to the radiolarian orders Acantharea, Polycystinea, and Taxopodida. A novel group within the photosynthetic stramenopiles was also identified. One sample closest to the interior of the Canada Basin yielded only four major taxa, and all but two of the sequences recovered belonged to the polar diatom Fragilariopsis and a radiolarian. Overall, 42% of the sequences were <98% similar to any sequences in GenBank. Moreover, 15% of these were <95% similar to previously recovered sequences, which is indicative of endemic or undersampled taxa in the North Polar environment. The cold, stable Arctic Ocean is a threatened environment, and climate change could result in significant loss of global microbial biodiversity.     

The Effects of Sub-Regional Climate Velocity on the Distribution and Spatial Extent of Marine Species Assemblages

Many studies illustrate variable patterns in individual species distribution shifts in response to changing temperature. However, an assemblage, a group of species that shares a common environmental niche, will likely exhibit similar responses to climate changes, and these community-level responses may have significant implications for ecosystem function. Therefore, we examine the relationship between observed shifts of species in assemblages and regional climate velocity (i.e., the rate and direction of change of temperature isotherms). The assemblages are defined in two sub-regions of the U.S. Northeast Shelf that have heterogeneous oceanography and bathymetry using four decades of bottom trawl survey data and we explore temporal changes in distribution, spatial range extent, thermal habitat area, and biomass, within assemblages. These sub-regional analyses allow the dissection of the relative roles of regional climate velocity and local physiography in shaping observed distribution shifts. We find that assemblages of species associated with shallower, warmer waters tend to shift west-southwest and to shallower waters over time, possibly towards cooler temperatures in the semi-enclosed Gulf of Maine, while species assemblages associated with relatively cooler and deeper waters shift deeper, but with little latitudinal change. Conversely, species assemblages associated with warmer and shallower water on the broad, shallow continental shelf from the Mid-Atlantic Bight to Georges Bank shift strongly northeast along latitudinal gradients with little change in depth. Shifts in depth among the southern species associated with deeper and cooler waters are more variable, although predominantly shifts are toward deeper waters. In addition, spatial expansion and contraction of species assemblages in each region corresponds to the area of suitable thermal habitat, but is inversely related to assemblage biomass. This suggests that assemblage distribution shifts in conjunction with expansion or contraction of thermal habitat acts to compress or stretch marine species assemblages, which may respectively amplify or dilute species interactions to an extent that is rarely considered. Overall, regional differences in climate change effects on the movement and extent of species assemblages hold important implications for management, mitigation, and adaptation on the U.S. Northeast Shelf.     

Distribution,population structure and trophodynamics of Southern Ocean Gymnoscopelus (Myctophidae) in the Scotia Sea

Polar Biology - Gymnoscopelus braueri, Gymnoscopelus fraseri and Gymnoscopelus nicholsi are common in the Southern Ocean mesopelagic fish community. However, their ecology is poorly understood in...     

Changes in the Ostracod Assemblages of the Northeastern Black Sea Shelf during the Late Pleistocene and Holocene

Paleontological Journal - Distribution of 57 ostracod species is investigated in the Quaternary sediment samples from the borehole RBH-16, drilled at the north-eastern Black Sea shelf edge off the...     

Distribution Patterns,Species Assemblages and Habitat Selection of the Stoneflies (Plecoptera) from Two Mediterranean River Basins in Southern Spain

The stonefly distribution and its relationship with habitat changes, based on stream physico chemical features, were investigated in two Mediterranean river basins (Guadaira and Guadalete, S Spain). Plecopteran nymph distribution varied along an elevation gradient. Both stonefly species richness and species diversity increased with altitude. Stoneflies were able to tolerate a wide range of environmental conditions but were absent from low altitude sites, temporary streams with high salinity values and high water temperature. A total of 13 stonefly species were found in the study area, from which Tyrrhenoleuctra minuta (Klapálek ) and Protonemura sp. were dominant. The most widespread species were Nemoura lacustris and Capnioneura mitis. Three distinct species assemblages were observed according to their distribution patterns, but with similar environmental preferences. Capnioneura petitpierreae and T. minuta showed preferences to low altitude sites, whereas C. mitis and N. lacustris were found throughout all sites. T. minuta and N. lacustris inhabited permanent and temporary sites, while the same species and C. mitis also were found in semipermanent streams. Temporally, most stoneflies were caught during winter (85.9%), especially at the low altitude sites.