Differential production yet chemical similarity of dissolved organic matter across a chronosequence with contrasting nutrient availability in Hawaii

Dissolved organic matter (DOM) is a critical phase in terrestrial carbon and nutrient cycling forming the basis of many ecosystem functions, yet the primary drivers controlling its flux from organic horizons and resultant chemical composition remain only partially understood. We studied dissolved organic matter production and chemistry from organic soil horizons across a 4.1 My old well-constrained chronosequence in Hawaii. Controlled soil column irrigation and leaching experiments were conducted on field moist organic soil horizons to quantify microbial activity, DOM production and chemistry. Both microbial activity (defined as CO₂ production per unit substrate C) and DOM production were found to be lowest in the youngest (0.3 ky) and oldest (4.1 My) sites of the chronosequence, where nutrients (N and P respectively) were most limiting. By contrast, DOM production and microbial activity was greatest at the intermediate-aged (20–350 ky) sites where nutrients were least limiting, unrelated to the mass of organic matter found in the organic horizons. While differences in production rates were found, ¹³C NMR spectroscopic results indicated that there was a convergence of chemistry from the solid to the dissolved phase at all sites. In particular, all DOM samples were found to have a high proportion of aromatic acids. With supporting data from a diverse range of ecosystems, we postulate that chemical homogenization of DOM relative to source material is a common feature of many ecosystems due to two microbially mediated processes: (1) similar extracellular enzymatic oxidation conferring solubility to a subset of degradation products; and (2) the rapid selective consumption of the more labile organic compounds in the soil solution.     

Estimating the oxidative ratio of the global terrestrial biosphere carbon

The oxidative ratio (OR) is the amount of CO₂ sequestered in the terrestrial biosphere for each mol of O₂ produced. The OR governs the efficiency of a terrestrial biome’s O₂ production and it has been used to calculate the balance of terrestrial and oceanic carbon sinks across the globe. However, the value used in carbon cycle calculations comes from only one study of one environment. Here we perform a meta-analysis of studies of soil organic matter and vegetation composition to calculate the first global ecosystem OR value. We use data from 138 samples across 31 studies covering 9 USDA global soil orders, 7 global biomes and 5 continents and combine this information as a weighted average based upon biome land area or organic carbon content of the soil order. Organic matter fractions could not be shown to be reliable proxies for whole soil or vegetation OR. The resulting analysis suggests that although the presently used value of 1.1 is within the range of natural occurrence, it is not the most accurate choice, representing between the 97th and 99th percentile value. Our study yields a global terrestrial OR = 1.04 ± 0.03. This value of OR means that the sink of anthropogenic carbon fluxes to land has been underestimated (and the sink to the ocean overestimated) by up to 14 %. Recalculating with our OR value, the fossil fuel carbon flux to land is 1.48 ± 0.04 Gt C/year and flux to oceans is 2.02 ± 0.03 Gt C/year.     

Microbial enzyme activity at the watershed scale: response to chronic nitrogen deposition and acute phosphorus enrichment

Microbial enzymes play a critical role in organic matter decomposition and enzyme activity can dynamically respond to shifts in inorganic nutrient and substrate availability, reflecting the nutrient and energy limitation of the microbial community. We characterized microbial enzyme response to shifting nitrogen (N) and phosphorus (P) availability across terrestrial and aquatic environments at the Bear Brook Watershed in Maine, the site of a whole-watershed N enrichment experiment. We compared activity of β-1,4-glucosidase (BG); β-1,4-N-acetylglucosaminidase (NAG); acid phosphatase (AP) in soil, leaf litter in terrestrial and stream habitats and stream biofilms in a reference and N enriched watershed, representing whole-ecosystem response to chronic N enrichment. In addition, we used shorter, experimental P enrichments to address potential P limitation under ambient and elevated N availability. We found that BG and NAG activity were not affected by the long-term N enrichment in either habitat. Enhanced P limitation due to N enrichment was evident only in the aquatic habitats with 5- and 8-fold higher treated watershed AP activity in stream biofilms and stream litter, respectively. Acute P additions reduced AP activity and increased BG activity and these effects were also most pronounced in the streams. The stoichiometry of enzyme activity was constrained across ecosystem compartments with regression slopes for lnBG:lnNAG, lnBG:lnAP, and lnNAG:lnAP close to 1, ranging 1.142–1.241. We found that microbial enzyme response to shifting N and P availability varied among watershed compartments, typically with stronger effects in aquatic habitats. This suggests that understanding the response of ecosystem function to disturbance at the watershed scale requires simultaneous consideration of all compartments.     

Low Levels of Allochthony in Consumers Across Three High-Elevation Lake Types

The integration of lakes into watershed-scale energy budgets remains a major goal of aquatic ecosystem ecology. However, this enterprise has focused almost exclusively on temperate and boreal systems and on zooplankton as representatives of system-wide energy flow. We investigated the proportion of consumer biomass derived from terrestrial sources, allochthony, in three classes of high-elevation lakes—alpine, large and small montane—of varying geometry and watershed ecosystem development, and across five taxa, including macrobenthic invertebrates and fish. We used stable isotopes of carbon (¹³C:¹²C), nitrogen (¹⁵N:¹⁴N), and hydrogen (²H:¹H) to fit a modular Bayesian mixing model, which estimated proportional assimilation of phytoplankton, algal periphyton, and terrestrial organic matter by each consumer. The stable isotope analysis was supplemented with a comparison of fatty acid profiles between consumers and producers, and with a Daphnia magna rearing study involving aquatic and terrestrial nutrient sources. The most probable estimate of allochthony across consumer taxa was 41% in small montane lakes (< 0.1 ha) with high terrestrial C loading. For large montane (3–11 ha) and alpine lakes (0.8–3 ha), with substantially less terrestrial influence, allochthony was just 4 and 3%, respectively. Allochthony was also lower on average for benthic grazers than for pelagic consumers. Our results corroborate previous findings that lake size, depth, and light penetration are dominant physical controls on allochthony, but add that it sharply declines at high elevation due to changes in terrestrial primary production near or above tree line.     

Spatiotemporal heterogeneity of soil and sediment respiration in a river‐floodplain mosaic (Tagliamento,NE Italy)

1. In their natural state, river floodplains are composed of a complex mosaic of contrasting aquatic and terrestrial habitats. These habitats are expected to differ widely in their properties and corresponding ecological processes, although empirical data on their capacity to produce, store and transform organic matter and nutrients are limited. 2. The objectives of this study were (i) to quantify the spatiotemporal variation of respiration, a dominant carbon flux in ecosystems, in a complex river floodplain, (ii) to identify the environmental drivers of respiration within and among floodplain habitat types and (iii) to calculate whole‐floodplain respiration and to put these values into a global ecosystem context. 3. We measured soil and sediment respiration (sum of root and heterotrophic respiration; SR) throughout an annual cycle in two aquatic (pond and channel) and four terrestrial (gravel, large wood, vegetated island and riparian forest) floodplain habitat types in the island‐braided section of the near‐natural Tagliamento River (NE Italy). 4. Floodplain habitat types differed greatly in substratum composition (soil to coarse gravel), organic matter content (0.63 to 4.1% ash‐free dry mass) and temperature (seasonal range per habitat type: 8.6 to 33.1 °C). Average annual SR ranged from 0.54 ± 1.56 (exposed gravel) to 3.94 ± 3.72 μmol CO₂ m^?2 s^?1 (vegetated islands) indicating distinct variation in respiration within and among habitat types. Temperature was the most important predictor of SR. However, the Q₁₀ value ranged from 1.62 (channel habitat) to 4.57 (riparian forest), demonstrating major differences in habitat‐specific temperature sensitivity in SR. 5. Total annual SR in individual floodplain habitats ranged from 160 (ponds) to 1205 g C m^?2 (vegetated islands) and spanned almost the entire range of global ecosystem respiration, from deserts to tropical forests.     

Linking the evolution of habitat choice to ecosystem functioning: direct and indirect effects of pond-reproducing fire salamanders on aquatic-terrestrial subsidies

Shifts in life history traits and in the behaviour of species can potentially alter ecosystem functioning. The reproduction of the central European fire salamander (Salamandra salamandra), which usually deposits its larvae in first-order streams, in small pool and pond-like habitats, is an example of a recent local adaptation in this species. Here we aimed to quantify the direct and indirect effects of the predatory larvae on the aquatic food webs in the ponds and on the flux of matter between the ponds and adjacent terrestrial habitats. Our estimates are based on biomass data of the present pond fauna as well as on the analysis of stomach content data, growth rates and population dynamics of the salamander larvae in pond habitats. By their deposition of larvae in early spring, female fire salamanders import between 0.07 and 2.86 g dry mass m^?2 larval biomass into the ponds. Due to high mortality rates in the larval phase and the relatively small size at metamorphosis of the pond-adapted salamanders compared to stream-adapted ones, the biomass export of the metamorphosed salamanders clearly falls below the initial biomass import. Catastrophic events such as high water temperatures and low oxygen levels may even occasionally result in mass mortalities of salamander larvae and thus in a net 100 % import of the salamander biomass into the pond food webs. Indirect effects further accelerate this net import of matter into the aquatic habitat, e.g. the feeding of salamanders on aquatic insect larvae with the emergence of terrestrial adults—thus preventing export—and on terrestrial organisms that fall on the water surface (supporting import). This study demonstrates that the adaptation of salamanders to pond reproduction can alter food web linkages across ecosystem boundaries by enhancing the flux of materials and energy from terrestrial (i.e. forest) to the aquatic (i.e. pond) habitat.     

No temperature acclimation of soil extracellular enzymes to experimental warming in an alpine grassland ecosystem on the Tibetan Plateau

Alpine grassland soils store large amounts of soil organic carbon (SOC) and are susceptible to rising air temperature. Soil extracellular enzymes catalyze the rate-limiting step in SOC decomposition and their catalysis, production and degradation rates are regulated by temperature. Therefore, the responses of these enzymes to warming could have a profound impact on carbon cycling in the alpine grassland ecosystems. This study was conducted to measure the responses of soil extracellular enzyme activity and temperature sensitivity (Q₁₀) to experimental warming in samples from an alpine grassland ecosystem on the Tibetan Plateau. A free air-temperature enhancement system was set up in May 2006. We measured soil microbial biomass, nutrient availability and the activity of five extracellular enzymes in 2009 and 2010. The Q₁₀ of each enzyme was calculated using a simple first-order exponential equation. We found that warming had no significant effects on soil microbial biomass C, the labile C or N content, or nutrient availability. Significant differences in the activity of most extracellular enzymes among sampling dates were found, with typically higher enzyme activity during the warm period of the year. The effects of warming on the activity of the five extracellular enzymes at 20 °C were not significant. Enzyme activity in vitro strongly increased with temperature up to 27 °C or over 30 °C (optimum temperature; T_opt). Seasonal variations in the Q₁₀ were found, but the effects of warming on Q₁₀ were not significant. We conclude that soil extracellular enzymes adapted to seasonal temperature variations, but did not acclimate to the field experimental warming.     

Variation in active and passive resource inputs to experimental pools: mechanisms and possible consequences for food webs

1. Cross‐ecosystem movements of resources, including detritus, nutrients and living prey, can strongly influence food web dynamics in recipient habitats. Variation in resource inputs is thought to be driven by factors external to the recipient habitat (e.g. donor habitat productivity and boundary conditions). However, inputs of or by ‘active’ living resources may be strongly influenced by recipient habitat quality when organisms exhibit behavioural habitat selection when crossing ecosystem boundaries. 2. To examine whether behavioural responses to recipient habitat quality alter the relative inputs of ‘active’ living and ‘passive’ detrital resources to recipient food webs, we manipulated the presence of caged predatory fish and measured biomass, energy and organic content of inputs to outdoor experimental pools of adult aquatic insects, frog eggs, terrestrial plant matter and terrestrial arthropods. 3. Caged fish reduced the biomass, energy and organic matter donated to pools by tree frog eggs by ～70%, but did not alter insect colonisation or passive allochthonous inputs of terrestrial arthropods and plant material. Terrestrial plant matter and adult aquatic insects provided the most energy and organic matter inputs to the pools (40–50%), while terrestrial arthropods provided the least (7%). Inputs of frog egg were relatively small but varied considerably among pools and over time (3%, range = 0–20%). Absolute and proportional amounts varied by input type. 4. Aquatic predators can strongly affect the magnitude of active, but not passive, inputs and that the effect of recipient habitat quality on active inputs is variable. Furthermore, some active inputs (i.e. aquatic insect colonists) can provide similar amounts of energy and organic matter as passive inputs of terrestrial plant matter, which are well known to be important. Because inputs differ in quality and the trophic level they subsidise, proportional changes in input type could have strong effects on recipient food webs. 5. Cross‐ecosystem resource inputs have previously been characterised as donor‐controlled. However, control by the recipient food web could lead to greater feedback between resource flow and consumer dynamics than has been appreciated so far.     

Hydrologic Drivers and Seasonality of Dissolved Organic Carbon Concentration, Nitrogen Content, Bioavailability, and Export in a Forested New England Stream

We present the results of a full year of high-resolution monitoring of hydrologic event-driven export of stream dissolved organic matter (DOM) from the forested Bigelow Brook watershed in Harvard Forest, Massachusetts, USA. A combination of in situ fluorescent dissolved organic matter (FDOM) measurement, grab samples, and bioassays was utilized. FDOM was identified as a strong indicator of concentration for dissolved organic carbon (DOC, r ² = 0.96), dissolved organic nitrogen (DON, r ² = 0.81), and bioavailable DOC (BDOC, r ² = 0.81). Relationships between FDOM and concentration were utilized to improve characterization of patterns of hydrological event-driven export and the quantification of annual export. This characterization was possible because DOM composition remained relatively consistent seasonally; however, a subtle shift to increased fluorescence per unit absorbance was observed for summer and fall seasons and percent BDOC did increase slightly with increasing concentrations. The majority of export occurred during pulsed hydrological events, so the greatest impact of bioavailable exports may be on downstream aquatic ecosystems. Export from individual events was highly seasonal in nature with the highest flow weighted mean concentrations (DOC_FW) being observed in late summer and fall months, but the highest total export being observed for larger winter storms. Seasonal trends in DOC export coincide with weather driven changes in surface and subsurface flow paths, potential for depletion and rebuilding of a flushable soil organic matter pool, and the availability of terrestrial carbon sources such as leaf litter. Our approach and findings demonstrate the utility of high frequency FDOM measurement to improve estimates of intra-annual temporal trends of DOM export.     

Short-term carbon input increases microbial nitrogen demand,but not microbial nitrogen mining,in a set of boreal forest soils

Rising carbon dioxide (CO₂) concentrations and temperatures are expected to stimulate plant productivity and ecosystem C sequestration, but these effects require a concurrent increase in N availability for plants. Plants might indirectly promote N availability as they release organic C into the soil (e.g., by root exudation) that can increase microbial soil organic matter (SOM) decomposition (“priming effect”), and possibly the enzymatic breakdown of N-rich polymers, such as proteins, into bio-available units (“N mining”). We tested the adjustment of protein depolymerization to changing soil C and N availability in a laboratory experiment. We added easily available C or N sources to six boreal forest soils, and determined soil organic C mineralization, gross protein depolymerization and gross ammonification rates (using ¹⁵N pool dilution assays), and potential extracellular enzyme activities after 1 week of incubation. Added C sources were ¹³C-labelled to distinguish substrate from soil derived C mineralization. Observed effects reflect short-term adaptations of non-symbiotic soil microorganisms to increased C or N availability. Although C input promoted microbial growth and N demand, we did not find indicators of increased N mobilization from SOM polymers, given that none of the soils showed a significant increase in protein depolymerization, and only one soil showed a significant increase in N-targeting enzymes. Instead, our findings suggest that microorganisms immobilized the already available N more efficiently, as indicated by decreased ammonification and inorganic N concentrations. Likewise, although N input stimulated ammonification, we found no significant effect on protein depolymerization. Although our findings do not rule out in general that higher plant-soil C allocation can promote microbial N mining, they suggest that such an effect can be counteracted, at least in the short term, by increased microbial N immobilization, further aggravating plant N limitation.     

Effects of Warming on Stream Biofilm Organic Matter Use Capabilities

The understanding of ecosystem responses to changing environmental conditions is becoming increasingly relevant in the context of global warming. Microbial biofilm communities in streams play a key role in organic matter cycling which might be modulated by shifts in flowing water temperature. In this study, we performed an experiment at the Candal stream (Portugal) longitudinally divided into two reaches: a control half and an experimental half where water temperature was 3 °C above that of the basal stream water. Biofilm colonization was monitored during 42 days in the two stream halves. Changes in biofilm function (extracellular enzyme activities and carbon substrate utilization profiles) as well as chlorophyll a and prokaryote densities were analyzed. The biofilm in the experimental half showed a higher capacity to decompose cellulose, hemicellulose, lignin, and peptidic compounds. Total leucine-aminopeptidase, cellobiohydrolase and β-xylosidase showed a respective 93, 66, and 61 % increase in activity over the control; much higher than would be predicted by only the direct temperature physical effect. In contrast, phosphatase and lipase activity showed the lowest sensitivity to temperature. The biofilms from the experimental half also showed a distinct functional fingerprint and higher carbon usage diversity and richness, especially due to a wider use of polymers and carbohydrates. The changes in the biofilm functional capabilities might be indirectly affected by the higher prokaryote and chlorophyll density measured in the biofilm of the experimental half. The present study provides evidence that a realistic stream temperature increase by 3 °C changes the biofilm metabolism to a greater decomposition of polymeric complex compounds and peptides but lower decomposition of lipids. This might affect stream organic matter cycling and the transfer of carbon to higher trophic levels.     

Longitudinal pattern of resource utilization by aquatic consumers along a disturbed subtropical urban river: Estimating the relative contribution of resources with stable isotope analysis

The utilization of food resources by aquatic consumers reflects the structure and functioning of river food webs. In lotic water systems, where food availability and predator–prey relationships vary with gradient changes in physical conditions, understanding diet assimilation by local communities is important for ecosystem conservation. In the subtropical Liuxi River, southern China, the relative contribution of basal resources to the diet assimilation of functional feeding groups (FFGs) was determined by stable carbon (¹³C) and nitrogen (¹⁵N) isotope analyses. The output of Bayesian mixing models showed that diatom‐dominated periphyton (epilithic biofilm), aquatic C₃ plants (submerged hydrophytes), and suspended particulate organic matter (SPOM) associated with terrestrial C₃ plants contributed the most to the diet assimilation of FFGs in the upper, middle, and lower reaches, respectively. The relative contribution of consumer diet assimilation was weighted by the biomass (wet weight, g/m²) of each FFG to reflect resource utilization at the assemblage level. From the upper to the lower reaches, the spatial variation in the diet assimilation of fish and invertebrate assemblages could be summarized as a longitudinal decrease in periphyton (from 57%–76% to <3%) and an increase in SPOM (from <7% to 51%–68%) with a notable midstream increase in aquatic C₃ plants (23%–48%). These results indicate that instream consumers in the Liuxi River rely more on autochthonous production (e.g., periphyton and submerged hydrophytes) than on terrestrially derived allochthonous matter (e.g., terrestrial plants). The pattern of resource utilization by consumers in the mid‐upper Liuxi River is consistent with findings from other open subtropical and neotropical rivers and provides evidence for the riverine productivity model. Our study indicates that protecting inherent producers in rivers (e.g., periphyton and submerged hydrophytes) and restoring their associated habitats (e.g., riffles with cobble substrate) are conducive to aquatic ecosystem management.     

Regional-Level Inputs of Emergent Aquatic Insects from Water to Land

Emergent aquatic insects can provide inputs to terrestrial ecosystems near lentic and lotic waterbodies, producing ecosystem linkages at the aquatic–terrestrial interface. Although aquatic insect emergence has been examined for individual sites, the magnitude and spatial distribution of this phenomenon has not been examined at regional spatial scales. Here, we characterize this cross-habitat linkage for the state of Wisconsin, USA (169,639 km²). We combined GIS hydrological data with empirical data and predictive models of aquatic insect production to estimate annual aquatic emergence for the state of Wisconsin. Total emergence (lentic + lotic) was estimated to be about 6,800 metric tons of C y^?1. Lentic systems comprised 79% of total estimated insect emergence, primarily due to the large amount of lake surface area relative to streams. This is due to both basic ecosystem geometry and the overall abundance of lakes in Wisconsin. Spatial variation was high: insect emergence in southwestern Wisconsin was dominated by streams, whereas for most of the rest of the state insect emergence was dominated by lakes. Lentic inputs to land were highly concentrated (relative to lotic inputs) because lakes have a high ratio of surface area to buffer area. Although less concentrated, the spatial extent of lotic influence was greater: statewide, four times more land area fell within the 100 m buffer zones of streams compared to lakes. Large waterbodies (almost all of which were lakes) were hotspots of insect emergence and input to land. Aquatic insect inputs exceed estimated terrestrial secondary production in 13% of buffer area, and by a factor of 100 or more adjacent to large lakes (>50,000 ha). The model sensitivity analysis showed that the simplifying assumptions and sources of potential error in the input variables had a minor impact on the overall results.     

Ecosystem effects of water column minnows in experimental streams

We used red shiner (Cyprinella lutrensis) as a model to examine ecosystem effects of water column stream minnows (Cyprinidae) in experimental streams. Benthic primary productivity, benthic invertebrate abundance, water column nutrient concentrations, size distribution of benthic particulate organic matter (BPOM), and sedimentation rates were measured across a range of fish densities (0–26.6 fish m^–2) over a 35-day period. In addition, effects of fish density on algal standing crop and benthic invertebrates in experimental streams were examined over a longer time span (156 and 203 days). After 35 days, benthic primary productivity was positively associated with fish density, with an approximate three-fold increase in productivity between experimental streams stocked with no fish and those with 26.6 fish m^–2. No effects on other ecosystem properties were detected after 35 days. Additionally, there was no effect on algal standing crop after 156 or 203 days and no effect on benthic invertebrates after 203 days. Because red shiners fed primarily on terrestrial insects, this experiment suggests that water column minnows can affect primary productivity in streams by transporting nutrients from terrestrial sources to the benthic compartment of the ecosystem. However, this effect may only be important in streams or during periods when nutrients are limiting.     

Preparation of eutectic substrate mixtures for enzymatic conversion of ATC to l-cysteine at high concentration levels

High concentration eutectic substrate solutions for the enzymatic production of l-cysteine were prepared. Eutectic melting of binary mixtures consisting of d,l-2-amino-Δ²-thiazoline-4-carboxylic acid (ATC) as a substrate and malonic acid occurred at 39 °C with an ATC mole fraction of 0.5. Formation of eutectic mixtures was confirmed using SEM, SEM–EDS, and XPS surface analyses. Sorbitol, MnSO₄, and NaOH were used as supplements for the enzymatic reactions. Strategies for sequential addition of five compounds, including a binary ATC mixture and supplements, during preparation of eutectic substrate solutions were established. Eutectic substrate solutions were stable for 24 h. After 6 h of enzymatic reactions, a 550 mM l-cysteine yield was obtained from a 670 mM eutectic ATC solution.     

Impact of DOC trends resulting from changing climatic extremes and atmospheric deposition chemistry on periphyton community of a freshwater tropical lake of India

Recent measurements have demonstrated unprecedented increase in atmospheric deposition of nutrients in many parts of India. To determine whether atmospheric nutrient inputs would increase phytoplankton growth and catchment dissolved organic carbon (DOC) flushing to constrain benthic algae, we analyzed NO₃ ^? and PO ₄ ^?3 in atmospheric deposits; nutrients and DOC in runoff and lake water and standing crop biomass of phytoplankton and periphyton at Jaisamand Lake of Rajasthan, India. Atmospheric deposition of NO₃ ^? (7.18–29.95 kg ha^?1 year^?1) and PO ₄ ^?3 (0.56–2.15 kg ha^?1 year^?1) showed a consistently rising trend across the year. Microbial biomass and activity in catchment increased in response to atmospheric deposition. Lake DOC and nutrients showed strong coherence with their terrestrial and atmospheric fluxes. Phytoplankton development showed significant linearity with atmospheric input of nutrients. Air-driven input appeared to have compensated the nutrient constraints to phytoplankton during drought. The N:P stoichiometry of deposition and that of lake water indicated that, although there was a seasonal switchover to N- or P-limitation, phytoplankton were mainly co-limited by N and P due probably to the synergistic effects of combined N + P enrichment in the pelagic zone of the lake. Periphyton standing crop showed inverse relationship with phytoplankton and lake DOC. The study indicated that enhanced phytoplankton development and terrestrial DOC flushing in response to atmospheric nutrient input attenuated light penetration to constrain algal periphyton. We suggests that data on these issues may be considered in developing aquatic ecosystem models to establish future links between changing air–water–land interactions and associated shifts in lake ecosystem functioning for more accurately predicting climate change drivers and designing integrated lake basin management strategies.     

Partial characterization of a crude cold-active lipase from Rhodococcus cercidiphylli BZ22

Cold-active lipase production by the psychrophilic strain Rhodococcus cercidiphylli BZ22 isolated from hydrocarbon-contaminated alpine soil was investigated. Depending on the medium composition, high cell densities were observed at a temperature range of 1–10 °C in Luria–Bertani (LB) broth or 1–30 °C in Reasoner’s 2A (R2A). Maximum enzyme production was achieved at a cultivation temperature of 1–10 °C in LB medium. About 70–80 % of the secreted enzyme was bound to the cell and was highly active as a cell-immobilized lipase which exhibited good reusability; more than 60 % of the initial lipase activity was retained after five-fold reuse. The properties of the lipase produced by the investigated strain were compared with those of a mesophilic porcine pancreatic lipase (PPL). The thermal stability of the cell-immobilized bacterial lipase was higher than that of the extracellular enzyme. Highest activity was detected at 30 °C for the cell-immobilized enzyme and for PPL, while the extracellular enzyme displayed highest activity at 10–20 °C. The bacterial lipase hydrolyzed p-nitrophenyl (p-NP) esters with different acyl chain lengths (C₂–C₁₈). The highest hydrolytic activity was obtained with p-NP-butyrate (C₄) as substrate, while the highest substrate affinity was obtained with p-NP-dodecanoate (C₁₂) as substrate, indicating a clear preference of the enzyme for medium acyl chain lengths.     

Effects of invasive aquatic carrion on soil chemistry and terrestrial microbial communities

Carrion plays a crucial role in the recycling of nutrients and organic matter in ecosystems. Yet, despite their ecological importance, studies addressing the relevance of carrion originated from invasive alien species (IAS) in the interface between aquatic and terrestrial ecosystems are uncommon, especially those assessing belowground effects. In this study, we carried out a manipulative experiment to assess the impact of massive mortalities of the Asian clam Corbicula fluminea (Müller, 1774) as a carrion subsidy evaluating possible effects on the terrestrial soil chemistry and the structure of a microbial (bacteria and fungi) community. We placed five levels of C. fluminea density (0, 100, 500, 1000 and 2000 ind. m^?2) and samples were collected 7, 30 and 90 days after clams’ addition. The results revealed that C. fluminea carrion have a significant effect belowground, especially on nutrients content (mainly NH₄ ⁺, NO₂ ^?, NO₃ ^? and PO₄ ^3?), fungal biomass and fungal and bacterial diversity. Given the predicted increase and intensification of extreme climatic events and the widespread distribution of several aquatic IAS (including bivalve species such as C. fluminea) the ecological importance of these massive mortalities (and resulting carrion) cannot be ignored because they may affect microbial communities with significant impacts on nutrient cycling, even in adjacent terrestrial habitats.