Landslide early succession in a neotropical dry forest

Early succession on large landslides in highly humanized areas that have a tropical dry climate is not well studied. This study documented vegetation recovery during the first 4 years after disturbance at a landslide on Casita Volcano, Nicaragua. We aimed to determine the main pathways and causes of change in community features, such as richness, biovolume, and species composition and verify the role played by environmental heterogeneity. Data consisting on number, covers and mean height of woody species and several abiotic factors related to fertility and stability of substrates were obtained from permanent plots in previously defined zones. Pathways of early succession were highly contingent on abiotic heterogeneity and landscape context and were mainly controlled by abiotic factors associated with fertility of substrates, and incidence of human disturbances. Those results might form the basis of a model of early succession on landslides located in densely populated areas within tropical dry ecosystems. Our results suggest that, rather than focusing research on large-scale disturbances, the study of succession in landslides of the type that occurred on Casita Volcano must point towards the response of ecosystems to a much more complex disturbance regime, in which human-induced disturbances play a major role.     

Pollen dispersal and representation in a neotropical rain forest

Results of 3 years of pollen trapping on Barro Colorado Island, Panama, are presented. Minimum pollen dispersal distances are estimated for the most abundant pollen taxa. Dispersal distances for some taxa appear to be as low as 5 m, while for other taxa at least 50% of the trapped pollen had travelled more than 40 m. No consistent pattern of spatial variation was reflected in the pollen rain, however, samples close to large canopy gaps had exceptional abundances of 'disturbance' taxa. A preliminary analysis of the representation of canopy components indicates that as much as 19% of pollen caught in the traps was derived from large tree species.     

Microhabitat associations and seedling bank dynamics in a neotropical forest

We conducted a rigorous test of tropical tree seedling microhabitat differentiation by examining microhabitat associations, survival and growth of established seedlings of ten tropical tree species representing a four-factor gradient in seed size. Eight microhabitat variables describing soil and light conditions were measured directly adjacent to each of 588 seedlings within twelve 10×100 m belt transects at Paracou, French Guiana, and at 264 reference points along the transects. From these measurements, we defined three principal components describing soil richness, soil softness and canopy openness. Six of ten species (in 9 of 30 total cases) were distributed non-randomly with respect to microhabitat along at least one principal component. However, few species demonstrated clear microhabitat specialization. All shifts in distribution relative to reference points were in the same direction (richer, softer soil). Furthermore, of 135 pairwise comparisons among the species, only 7 were significantly different. More than three-fourths of all seedlings (75.3%) survived over the 2-year monitoring period, but survival rates varied widely among species. In no case was the probability of survival influenced by any microhabitat parameter. Relative height growth rates for the seedlings over 2 years varied from –0.031 cm cm^–1 year^–1 (Dicorynia guianensis, Caesalpiniaceae) to 0.088 cm cm^–1 year^–1 (Virola michelii, Myristicaceae). In only 4 of 30 cases was height growth significantly associated with one of the three principal components. Because the conditions in this study were designed to maximize the chance of finding microhabitat differentiation among a group of species differing greatly in life history traits, the lack of microhabitat specialization it uncovered suggests that microhabitat partitioning among tropical tree species at the established seedling stage is unlikely to contribute greatly to coexistence among these species.     

Modeling the spatial distribution and fruiting pattern of a key tree species in a neotropical forest: methodology and potential applications

Background

The movement patterns of wild animals depend crucially on the spatial and temporal availability of resources in their habitat. To date, most attempts to model this relationship were forced to rely on simplified assumptions about the spatiotemporal distribution of food resources. Here we demonstrate how advances in statistics permit the combination of sparse ground sampling with remote sensing imagery to generate biological relevant, spatially and temporally explicit distributions of food resources. We illustrate our procedure by creating a detailed simulation model of fruit production patterns for Dipteryx oleifera, a keystone tree species, on Barro Colorado Island (BCI), Panama.

Methodology and Principal Findings

Aerial photographs providing GPS positions for large, canopy trees, the complete census of a 50-ha and 25-ha area, diameter at breast height data from haphazardly sampled trees and long-term phenology data from six trees were used to fit 1) a point process model of tree spatial distribution and 2) a generalized linear mixed-effect model of temporal variation of fruit production. The fitted parameters from these models are then used to create a stochastic simulation model which incorporates spatio-temporal variations of D. oleifera fruit availability on BCI.

Conclusions and Significance

We present a framework that can provide a statistical characterization of the habitat that can be included in agent-based models of animal movements. When environmental heterogeneity cannot be exhaustively mapped, this approach can be a powerful alternative. The results of our model on the spatio-temporal variation in D. oleifera fruit availability will be used to understand behavioral and movement patterns of several species on BCI.     

Nitrogen and phosphorus resorption in a neotropical rain forest of a nutrient-rich soil

In tropical forests with nutrient-rich soil tree's nutrient resorption from senesced leaves has not always been observed to be low. Perhaps this lack of consistence is partly owing to the nutrient resorption methods used. The aim of the study was to analyse N and P resorption proficiency from tropical rain forest trees in a nutrient-rich soil. It was hypothesised that trees would exhibit low nutrient resorption in a nutrient-rich soil. The soil concentrations of total N and extractable P, among other physical and chemical characteristics, were analysed in 30 samples in the soil surface (10 cm) of three undisturbed forest plots at 'Estaci6n de Biologia Los Tuxtlas' on the east coast of Mexico (18 degrees 34' - 18 degrees 36' N, 95 degrees 04' - 95 degrees 09' W). N and P resorption proficiency were determined from senescing leaves in 11 dominant tree species. Nitrogen was analysed by microkjeldahl digestion with sulphuric acid and distilled with boric acid, and phosphorus was analysed by digestion with nitric acid and perchloric acid. Soil was rich in total N (0.50%, n = 30) and extractable P (4.11 microg g(-1) n = 30). As expected, trees showed incomplete N (1.13%, n = 11) and P (0.11%, n = 1) resorption. With a more accurate method of nutrient resorption assessment, it is possible to prove that a forest community with a nutrient-rich soil can have low levels of N and P resorption.     

Soil organic matter dynamics under decaying wood in a subtropical wet forest: effect of tree species and decay stage

Decaying wood is an important structural and functional component of forests: it contributes to generate habitat diversity, acts as either sink or source of nutrients, and plays a preponderant role in soil formation. Thus, decaying wood might likely have measurable effects on chemical properties of the underlying soil. We hypothesized that decaying wood would have a stronger effect on soil as decomposition advances and that such effect would vary according to wood quality. Twenty logs from two species with contrasting wood properties (Dacryodes excelsa Vahl. and Swietenia macrophylla King) and at two different decay stages (6 and 15 years after falling) were selected, and soil under and 50 cm away from decaying logs was sampled for soil organic matter (SOM) fractions [NaOH-extractable and water-extractable organic matter -(WEOM)] and properties (WEOM aromaticity). NaOH-extractable C and WEOM were higher in the soil influenced by 15-year-old logs, while the degree of aromaticity of WEOM was higher in the soil influenced by the 6-year-old logs. Decaying logs did influence properties of the underlying soil with differing effects according to the species since there was more NaOH-extractable C in the soil associated to D. excelsa logs and more WEOM in the soil associated to S. macrophylla older logs. It is proposed that such effects occurred through changes in the relative quantity and quality of different SOM fractions, as influenced by species and advancement in decomposition. Through its effect on SOM and nutrient dynamics, decaying wood can contribute to the spatial heterogeneity of soil properties, and can affect process of soil formation and nutrient cycling. Responsible Editor: Barbara Wick.     

Investigation on catechin as a beech wood decay biomarker

A high-performance liquid chromatography (HPLC) method based on the evolution of wood extractives was developed to follow the first stages of fungal degradation of beech wood exposed to Coriolus versicolor. The nature and the quantity of the extracts initially present in wood depended on the extraction conditions and also on the wood-drying conditions (time and temperature). The most interesting fraction was soxhlet extracted with acetone at 56 °C for 6 h. The best conditions to avoid extractives degradation consisted of a moderate drying at 55 °C for 48 h allowing identification of catechin as potential tracer. After 2 weeks of wood blocks exposure to C. versicolor, analysis of their acetonic extractives showed that catechin signal initially detected in beech wood, had totally disappeared. Treatment of wood with an appropriate fungicide such as propiconazole before exposure to C. versicolor, prevents the catechin amount from any variation. The comparison of these results with the classical weight loss (WL) measurements obtained after long-time experiments on treated and untreated wood blocks shows that the catechin amount evolution, monitored during 2 weeks, correlates with the wood resistance evaluated during 16 weeks, allowing the use of this flavonoid as a valuable biomarker of wood decay.     

Colonisation of ephemeral forest habitats by specialised species: beetles and bugs associated with recently dead aspen wood

The most appropriate strategy for preserving fragmented populations depends on a species’ ability to colonise distant habitat patches. Insects associated with early decay stages of dead wood are expected to have a high capacity to colonise new habitat patches. To study the dispersal ranges of beetles (Coleoptera) and flat bugs (Hemiptera: Aradidae) dependent on recently dead aspen (Populus tremula) wood in Finland, we set out 58 piles of recently cut aspen logs at various distances up to 1.6 km from forests that contained a high density of old aspen trees. We captured insects by trunk window-traps, and counted beetles’ exit holes. Habitat connectivity was measured in terms of the amount of suitable aspen-wood in the surrounding environment, with the closest dead wood items up-weighted by a negative-exponential function. The log-piles attracted many saproxylic insects including four red-listed aspen-specialist species. The exposure of log-piles to the sun, and high levels of habitat connectivity increased the species richness of aspen-specialists, whereas bark peeling by moose decreased richness. The spatial scale at which species richness had its strongest response to habitat was 93 m. Among individual species there was a wide variability in spatial scale of response. This study supports the view that conservation efforts in boreal forests should be concentrated on sites where colonisation by target species is most likely. Restoration of habitat by re-locating logs may be useful at localities with a rich and specialised fauna but which have too low rate of formation of dead wood by natural processes.     

Bird diversity and selection of protected areas in a large neotropical forest tract

The unbroken primary rain forest currently covering the interior ofFrench Guiana still offers a unique opportunity to establish a network of largeprotected areas. Bird species richness was surveyed within 20 study areasspreadover the country to assess the relative abundance and frequency of occurrenceofforest interior and natural gap taxa (391 species, excluding raptors andnon-resident birds). Richness, rarity, restricted range, hot spot andconservation value algorithms were used to rank sites in decreasing orders ofimportance and draw sets of survey sites likely to maximize bird diversity. Inmost sets from different methodological approaches, the southern regionconsistently emerged as a priority area for conservation, with the centralmountain range contributing some specialized taxa and the northern regionincorporating additional species, mostly from marginal habitats and moretypicalof the nearby coastal zone. Estimates of areas likely to preserve an almostcomplete sample of the regional biodiversity amounted to about 1–2millionhectares, either in one large area (national park) or divided into 2–3reserves overlapping regional hot spots. However, representation of all speciesand habitats in a protected area system is not an assurance of long-termviability when minimum viable population sizes and demographic patterns arelittle known, and when the risks and impacts of persistent human disturbancessuch as mining, logging and hunting are growing.     

Avian life-history determinants of local extinction risk in a hyper-fragmented neotropical forest landscape

The fact that species vary in their vulnerability to extinction is well documented, but the reasons for these differences remain poorly understood. Why should some species/families/guilds decline rapidly with increasing anthropogenic disturbance, while others either tolerate or proliferate in disturbed habitats? We investigated the bird species composition in 31 primary forest patches of varying size in a region of the Amazonian 'Arc of Deforestation' and assessed which species life-history traits predisposed individual species to extinction. Medium-sized non-flocking canopy frugivores/ominvores of low primary forest dependence were least likely to go extinct in small patches, while small-bodied flock-following primary-forest-dependent terrestrial insectivores were most fragmentation sensitive. We found highly idiosyncratic relationships between the minimum size of forest patches occupied by different species and their territory size requirements estimated based on other Amazonian studies. This suggests that avian assemblages in forest fragments primarily comprise species that either have good dispersal abilities or are highly tolerant to the non-forest matrix, rather than those whose minimum spatial requirements can be met by the size of available forest fragments.     

Mesostigmatid mites in four classes of wood decay

We studied the mesostigmatid mite community in four classes of wood decay in mixed (pine-oak) forest stands in the Wielkopolska region, Cental-West Poland. A total of 80 samples, including bark, phloem and rotten wood of coniferous and deciduous species logs, were taken in August 2006 and 2007. Decay classes were a qualitative, categorical index based on visual assessment of decomposition in coarse woody debris. A total of 3621 mesostigmatid mites were counted and identified to 91 species. In general the total number of species was diverse in the decay classes and ranged from 35 (classes I and II) to 58 (class IV). The average number of species did not differ significantly among wood decay classes. Also the abundance of mesostigmatids did not differ significantly among wood decay classes, but the highest abundance was observed in the last class (IV). Cluster analysis of the species identity index showed that the microhabitats were divided into two main clusters: relatively undecayed wood and decayed wood. Species accumulation curves showed that relatively decayed wood (class IV) had a greater rate of species accumulation than undecayed wood from the class I decomposition.     

Local neighborhood effects on long-term survival of individual trees in a neotropical forest

The survival of approximately 235 000 individual tropical trees and saplings in the 50 ha permanent plot on Barro Colorado Island (BCI), Panama was analyzed over a 13-year interval (1982–1995) as a function of four biotic neighborhood variables: (i) total stem density; (ii) conspecific density; (iii) relative plant size; and (iv) relative species richness. These neighborhood variables were measured in annular rings of width 2.5 m, extending 30 m from a given focal plant, and in one more distant annulus at 47.5–50 m. Because survival was spatially autocorrelated, a Gibbs sampler and a Monte Carlo Markov chain method were used for fitting an autologistic regression model to obtain unbiased estimates of parameter variances for hypothesis testing. After pooling all species at the community level, results showed that all four variables had significant and often strong effects on focal plant survival. Three of the four variables had negative effects on focal plant survival; relative plant size was the only variable with a positive effect (18% increase in the survival odds ratio). The variables with a negative effect on the survival odds ratio, in order of their effect strength in the nearest annulus, were: stem density (a 70% reduction in the survival odds ratio), conspecific density (50% reduction) and species richness (13% reduction). A guild-level analysis revealed considerable heterogeneity among guilds in their responses to these variables. For example, survival of gap species showed a much larger positive response to relative plant size than did survival of shade-tolerant species. Survival of shrub species was positively affected by conspecific density, but canopy tree survival was negatively affected. Conspecific density negatively affected survival of rare species much more strongly than survival of common species. The neighborhood effects of conspecific density disappear within approximately 12–15 m of the focal plant. Although locally strong, the rapid spatial decay of these effects raises unanswered questions about their quantitative contribution to the maintenance of tree diversity on landscape scales in the BCI forest.