Length‐weight relationships of eleven fish species from the middle reaches of Jinsha River,southwest China

Length‐weight relationships (LWRs) were determined for eleven endemic fish species [Coreius guichenoti (Sauvage & Dabry de Thiersant, 1874), Glyptothorax sinensis (Regan, 1908), Leptobotia elongata (Bleeker, 1870), Leptobotia taeniops (Sauvage, 1878), Pseudobagrus crassilabris (Günther, 1864), Rhinogobio ventralis (Sauvage & Dabry de Thiersant, 1874), Saurogobio dabryi (Bleeker, 1871), Schizothorax chongi (Fang, 1936), Schizothorax kozlovi (Nikolskii, 1903), Schizothorax prenanti (Tchang, 1930) and Schizothorax wangchiachii (Fang, 1936)] from the middle reaches of the Jinsha River in southwest China. Samples were obtained between May 2004 and July 2013 using various types of fishing gear and electroshock fishing techniques. For each species, the sample size, length range, weight range, LWR, 95% confidence intervals of a and b, and coefficient of correlation were determined. Prior to this study, the LWRs for four species (P. crassilabris, S. chongi, S. kozlovi and S. prenanti) were unknown.     

Length–weight relationships of five endemic fish species from the lower Yarlung Zangbo River,Tibet, China

The length–weight relationships were estimated for five endemic fishes (Schizothorax curvilabiatus, Schizothorax molesworthi, Garra kempi, Neolissochilus hexagonolepis, Exostoma labiatum) from the Yarlung Zangbo River in Tibet, China. Fishing gear used for sampling included 4 cm mesh gill nets (100 m long × 1.2 m high) and electrofishing, from December 2015 to January 2016. Three of the species have new records of maximum length in FishBase.     

Taxonomic implications for diaptomid copepods based on contrasting patterns of mitochondrial DNA sequence divergences in four morphospecies

Morphological identification methods do not provide reliable and meaningful species identifications for taxa where morphological differences among distinct species are either absent or overlooked (i.e., cryptic species). For example, due to the minute nature of the morphological characters used to delineate diaptomid copepod species and the apparent potential for copepod speciation to occur with little or no morphological change (i.e., morphological stasis), morphological identifications of diaptomid species may not adequately capture their true species diversity. Here, we present results from a geographic survey of mtDNA sequences from populations across the geographic ranges of four North American diaptomid species—Leptodiaptomus minutus, Skistodiaptomus pallidus, Skistodiaptomus reighardi, and Onychodiaptomus sanguineus. Shallow mitochondrial DNA sequence divergences (maximum of 1.1%) among haplotypes of L. minutus from across its geographic range suggest that current morphological identification techniques reliably identify this species. In contrast, we found large mitochondrial DNA sequence divergences (14–22%) among populations within the currently recognized morphospecies of S. pallidus, S. reighardi, and O. sanguineus. However, pairwise sequence divergences within four distinct S. pallidus clades and within populations of S. reighardi and O. sanguineus were similarly low (maximum of 1.5%) as found within L. minutus as a whole. Thus, the S. pallidus, S. reighardi, and O. sanguineus morphospecies may be considered best as cryptic species complexes. Our study therefore indicates that morphological identifications, while sufficient for some species, likely underestimate the true species diversity of diaptomid copepods. As such, we stress the need for extensive taxonomic revision that integrates genetic, morphological, reproductive, and ecological analyses of this diverse and important group of freshwater zooplankton. Furthermore, we believe an extensive taxonomic revision will shed important insight into major questions regarding the roles of geography, phylogeny, and habitat on the frequency of cryptic species on earth. Handling editor: S. I. Dodson     

Diploid hybrid origin of Ostryopsis intermedia (Betulaceae) in the Qinghai‐Tibet Plateau triggered by Quaternary climate change

Despite the well‐known effects that Quaternary climate oscillations had on shaping intraspecific diversity, their role in driving homoploid hybrid speciation is less clear. Here, we examine their importance in the putative homoploid hybrid origin and evolution of Ostryopsis intermedia, a diploid species occurring in the Qinghai‐Tibet Plateau (QTP), a biodiversity hotspot. We investigated interspecific relationships between this species and its only other congeners, O. davidiana and O. nobilis, based on four sets of nuclear and chloroplast population genetic data and tested alternative speciation hypotheses. All nuclear data distinguished the three species clearly and supported a close relationship between O. intermedia and the disjunctly distributed O. davidiana. Chloroplast DNA sequence variation identified two tentative lineages, which distinguished O. intermedia from O. davidiana; however, both were present in O. nobilis. Admixture analyses of genetic polymorphisms at 20 SSR loci and sequence variation at 11 nuclear loci and approximate Bayesian computation (ABC) tests supported the hypothesis that O. intermedia originated by homoploid hybrid speciation from O. davidiana and O. nobilis. We further estimated that O. davidiana and O. nobilis diverged 6–11 Ma, while O. intermedia originated 0.5–1.2 Ma when O. davidiana is believed to have migrated southward, contacted and hybridized with O. nobilis possibly during the largest Quaternary glaciation that occurred in this region. Our findings highlight the importance of Quaternary climate change in the QTP in causing hybrid speciation in this important biodiversity hotspot.     

Genetic population structure of <Emphasis Type="Italic">Osmunda japonica</Emphasis>, rheophilous <Emphasis Type="Italic">Osmunda lancea</Emphasis> and their hybrids

Rheophilous Osmunda lancea often hybridizes with a dryland ally, Osmunda japonica, to produce O. × intermedia, forming zonation in riverbanks and the adjacent dryland along flooding frequency clines. This study examined the genetic structure of populations consisting of O. × intermedia and the two parental species by analyzing ten nuclear DNA markers [six cleaved amplified polymorphic sequence (CAPS) markers and three simple sequence repeat (SSR) markers developed from an expressed sequence tag (EST) library, and the sequence of the glyceraldehyde-3-phosphate dehydrogenase gene GapCp] and chloroplast DNA sequences. The results suggest that the nuclear genes of O. japonica and O. lancea are genetically differentiated despite shared polymorphism in their chloroplast DNA sequences. This discrepancy may be attributable to natural selection and recent introgression, although it is not evident if introgression occurs between O. japonica and O. lancea in the examined populations. Our findings of putative F2 hybrids in O. × intermedia support its partial reproducibility, and also suggest that formation of later-generation hybrids generates morphological variation in O. × intermedia. O. lancea plants collected from geographically distant localities were genetically very similar, and it is suggested that O. lancea originated monotopically.     

Length‐weight relationships of three fish species from the Jatinga River (Barak drainage) in Assam,India

The present study reports the Length‐Weight relationships of three freshwater fish species, Amblyceps laticeps (McClelland, 1842), Danio dangila (Hamilton, 1822) and Lepidocephalichthys berdmorei (Blyth, 1860), based on monthly collections between November 2016 and October 2017. Fishes were collected from selected sampling sites along the Jatinga River (a tributary of the Barak River drainage) using cast nets (2.5 m; mesh size: 1.0–1.5 cm) and electrofishing device (Safari Surveyor, 12 V 7 amp). Estimated b values were 2.78 for A. laticeps, 3.19 for D. dangila and 2.92 for L. berdmorei respectively.     

Length–weight relationships of three schizothoracinae fish species from the Niyang River,a branch of the Yarlung Zangbo River,Tibet, China

The focus was on the length–weight relationships of three schizothoracinae species endemic to Tibet, including Schizothorax oconnori Lloyd, 1908, Ptychobarbus dipogon (Regan, 1905) and Schizopygopsis younghusbandi Regan, 1905, all of which are characterized by slow growth, late maturation and vulnerability to the environment (Ma et al., 2010, 2012; Duan et al., 2014). Among them, Schizothorax oconnori is an endangered fish and listed in the China species Red List (Wang and Xie, 2004, 2009). Samples were obtained by drift net fishing (mesh size 2 cm × 3 cm; 50 m net length) in November 2008. The r² value was 0.94, 0.97, 0.98 and the b value 3.51, 3.12, 3.16, representing Schizothorax oconnori, Ptychobarbus dipogon, and Schizopygopsis younghusbandi, respectively.     

Comparing Morphological and Molecular Estimates of Species Diversity in the Freshwater Genus Synura (Stramenopiles): A Model for Understanding Diversity of Eukaryotic Microorganisms

We performed a comparison of molecular and morphological diversity in a freshwater colonial genus Synura (Chrysophyceae, Stramenopiles), using the island of Newfoundland (Canada) as a case study. We examined the morphological species diversity in collections from 79 localities, and compared these findings to diversity based on molecular characters for 150 strains isolated from the same sites. Of 27 species or species-level lineages identified, only one third was recorded by both molecular and morphological techniques, showing both approaches are complementary in estimating species diversity within this genus. Eight taxa, each representing young evolutionary lineages, were recovered only by sequencing of isolated colonies, whereas ten species were recovered only microscopically. Our complex investigation, involving both morphological and molecular examinations, indicates that our knowledge of Synura diversity is still poor, limited only to a few well-studied areas. We revealed considerable cryptic diversity within the core S. petersenii and S. leptorrhabda lineages. We further resolved the phylogenetic position of two previously described taxa, S. kristiansenii and S. petersenii f. praefracta, propose species-level status for S. petersenii f. praefracta, and describe three new species, S. vinlandica, S. fluviatilis, and S. cornuta. Our findings add to the growing body of literature detailing distribution patterns observed in the genus, ranging from cosmopolitan species, to highly restricted taxa, to species such as S. hibernica found along coastal regions on multiple continents. Finally, our study illustrates the usefulness of combining detailed morphological information with gene sequence data to examine species diversity within chrysophyte algae.     

Delimitating cryptic species in the Gracilaria domingensis complex (Gracilariaceae,Rhodophyta) using molecular and morphological data

Species in the genus Gracilaria that display conspicuously flattened vegetative morphologies are a taxonomically challenging group of marine benthic red algae. This is a result of their species richness, morphological similarity, and broad phenotypic plasticity. Within this group, the Gracilaria domingensis complex is one of the most common, conspicuous, and morphologically variable species along the tropical western Atlantic Ocean. Previous research has identified that members of this complex belong to two distantly related clades. However, despite this increased phylogentic resolution, species delimitations within each of these clades remain unclear. Our study assessed the species diversity within this difficult complex using morphological and molecular data from three genetic markers (cox1, UPA, and rbcL). We additionally applied six single‐marker species delimitation methods (SDM: ABGD, GMYCs, GMYCm, SPN, bPTP, and PTP) to rbcL, which were largely in agreement regarding species delimitation. These results, combined with our analysis of morphology, indicate that the G. domingensis complex includes seven distinct species, each of which are not all most closely related: G. cervicornis; a ressurected G. ferox; G. apiculata subsp. apiculata; a new species, Gracilaria baiana sp. nov.; G. intermedia subsp. intermedia; G. venezuelensis; and G. domingensis sensu stricto, which includes the later heterotypic synonym, G. yoneshigueana. Our study demonstrates the value of multipronged strategies, including the use of both molecular and morphological approaches, to decipher cryptic species of red algae.     

DNA barcoding the genus Chara: molecular evidence recovers fewer taxa than the classical morphological approach

Charophytes (Charales) are benthic algae with a complex morphology. They are vulnerable to ecosystem changes, such as eutrophication, and are red‐listed in many countries. Accurate identification of Chara species is critical for understanding their diversity and for documenting changes in species distribution. Species delineation is, however, complicated, because of high phenotypic plasticity. We used barcodes of the ITS2, matK and rbcL regions to test if the distribution of barcode haplotypes among individuals is consistent with species boundaries as they are currently understood. The study included freshly collected and herbarium material of 91 specimens from 10 European countries, Canada and Argentina. Results showed that herbarium specimens are useful as a source of material for genetic analyses for aquatic plants like Chara. rbcL and matK had highest sequence recoverability, but rbcL had a somewhat lower discriminatory power than ITS2 and matK. The tree resulting from the concatenated data matrix grouped the samples into six main groups contrary to a traditional morphological approach that consisted of 14 different taxa. A large unresolved group consisted of C. intermedia, C. hispida, C. horrida, C. baltica, C. polyacantha, C. rudis, C. aculeolata, and C. corfuensis. A second unresolved group consisted of C. virgata and C. strigosa. The taxa within each of the unresolved groups shared identical barcode sequences on the 977 positions of the concatenated data matrix. The morphological differences of taxa within both unresolved groups include the number and length of spine cells, stipulodes, and bract cells. We suggest that these morphological traits have less taxonomic relevance than hitherto assumed.     

New findings on the origin of Cavia intermedia,one of the world's rarest mammals

Cavia intermedia, a rare species of cavy found exclusively on Moleques do Sul Island, Brazil, differs from other cavies in genetic and morphological characteristics and has been regarded as phylogenetically closest to Cavia magna. Here, I present morphological evidence for the likely origin of Cavia intermedia from an ancestor shared with Cavia magna: an external female genital organ similar in size and appearance to the male's penis. Masculinization of the female genitalia has been observed in Cavia magna but does not occur in Cavia aperea, which suggests a sister relationship between Cavia magna and Cavia intermedia.     

Genetic diversity of <Emphasis Type="Italic">Caragana</Emphasis> species of the Ordos Plateau in China

Plants of the genus Caragana (Fabaceae) are dominant shrub species of high ecological and economic importance on the Ordos Plateau in China. Due to natural environmental variability and anthropogenic impacts, Caragana pastures have experienced severe degradation, which has decreased their carrying capacity. In this study, we investigated the genetic diversity of eight Caragana species (C. purdomii, C. opulens, C. stenophylla, C. intermedia, C. korshinskii, C. roborovskyi, C. tibetica and C. brachypoda) on the Ordos Plateau by using ISSR markers. The results reveal high genetic diversity of all the species, with the percentage of polymorphic bands (PPB) reaching 100%. However, interspecific differences in genetic diversity within the genus were significant, as indicated by higher levels of genetic diversity of C. stenophylla, C. tibetica, C. intermedia, C. korshinskii and C. roborovskyi (PPB > 86%) when compared to the C. brachypoda with the lowest genetic diversity (PPB = 42.86%). Caragana brachypoda showed the lowest genetic similarity with and largest genetic distance from other taxa of the genus. Caragana tibetica had higher genetic diversity than C. roborovskyi. A large genetic distance was found between C. roborovskyi and C. tibetica, although the two species belong to Ser. Tragacanthoides and grow in a semidesert area. Such differences in genetic structure may be the reason for large areas occupied by C. tibetica, whereas C. roborovsky has rather limited distribution in the semidesert area. Caragana intermedia had high genetic diversity and a large genetic differentiation between intraspecific populations implying strong adaptability of the species to environmental fluctuations and selection capabilities. There was an obvious gene flow between C. intermedia and C. korshinskii, suggesting possible hybridization between these species is consistent with ecological variability, which may be important characteristics of Caragana plants in terms of molecular variation in the ecotone of Ordos plateau. Our results provide a molecular basis for sustainable management, utilization and conservation of Caragana plants on the Ordos plateau.     

<Emphasis Type="Italic">Stemonurus corrugatus</Emphasis> (Stemonuraceae,Icacinaceae s.l.) a new species from Sarawak

Summary   Stemonurus corrugatus Utteridge & Schori is described and illustrated as a new species from Sarawak, Malaysia. The new species is similar to S. grandifolius, S. scorpioides, and S. umbellatus, and morphological differences among the taxa are discussed. A distribution map and notes on the new species’ conservation status are provided.     

Delimitation of sympatric Palaemon (Decapoda,Palaemonidae) species of the Laguna Madre,Mexico

Grass shrimps Palaemon mundusnovus, P. pugio and P. vulgaris sympatrically inhabit in the Laguna Madre, Mexico. They exhibit very close morphological similarity and overlap in their diagnostic characteristics, which has hindered certainty in their identification and has raised doubt regarding their taxonomic validity. In this work, we analyse intra‐ and interspecific morphometric and meristic variability through a multivariate analysis, and we determine the molecular variation using mitochondrial sequences of the 12S, 16S and COX1 genes to confirm the validity of the three taxa as having distinct lineages or to recognize a smaller number of species with phenotypic plasticity. Our results corroborate the taxonomic validity of the three species; however, there is intraspecific plasticity, interspecific overlap of characteristics and greater morphological and molecular similarity between the species P. mundusnovus and P. pugio, whereas P. vulgaris was better delimited. These species form a monophyletic group but the phylogenetic relationship obtained is discussed. Telson length was the primary variable in the principal components analysis, whereas the length of the propodus of the second pereiopod was the best discriminant. The range of variation reported in the characteristics linked to the rostrum is extended, and its influence on the separation of these species is recognized. The joint application of multivariate analysis from morphological variables and molecular tools is recommended to clarify the taxonomic status of species featuring close morphological similarity and sympatric distribution.     

Comparative folliculogenesis and spermatogenesis of four teleost fish from a Reservoir in south‐eastern Brazil

Martins, Y.S., Moura, D.F., Santos, G.B., Rizzo, E. and Bazzoli, N. 2009. Comparative folliculogenesis and spermatogenesis of four teleost fish from a Reservoir in south‐eastern Brazil. —Acta Zoologica (Stockholm). 91 : 466–473. This study provides a comparative analysis of gametogenesis of neotropical teleosts Metynnis maculatus, Megalancistrus parananus, Cichla kelberi and Satanoperca pappaterra, through histological, histochemical and histometric techniques. In the ooplasm of C. kelberi and S. pappaterra conspicuous lipid vesicles were observed, which are characteristic of pelagic eggs produced by marine fishes. Perinucleolar oocytes were identified in the testis of S. pappaterra suggesting that this species is protogynous without functional hermaphroditism, an unusual pattern for neotropical fresh‐water fishes. The spermatozoa of the studied species have rounded heads, a characteristic of fish that externally fertilise their eggs. The follicular (granulosa) cells of the vitellogenic oocytes from the studied species were cuboidal or columnar, however, in C. kelberi there were columnar follicular cells at the vegetal pole and cuboidal cells at the animal pole. Variations of the histochemical content were detected in the cortical alveoli and follicular cells of vitellogenic oocytes showing differences in the mechanisms to block polyspermy and egg adhesiveness. Larger oocytes were recorded in species which demonstrated parental care behaviour and smaller oocytes were noted in those species with fractioned spawning.     

Abscisic acid regulates seed germination of Vellozia species in response to temperature

• The relationship between the phytohormones, gibberellin (GA) and abscisic acid (ABA) and light and temperature on seed germination is still not well understood. We aimed to investigate the role of the ABA and GA on seed germination of Vellozia caruncularis, V. intermedia and V. alutacea in response to light/dark conditions on different temperature.
• Seeds were incubated in GA (GA₃ or GA₄) or ABA and their respective biosynthesis inhibitors (paclobutrazol – PAC, and fluridone – FLU) solutions at two contrasting temperatures (25 and 40 °C). Furthermore, endogenous concentrations of active GAs and those of ABA were measured in seeds of V. intermedia and V. alutacea during imbibition/germination.
• Exogenous ABA inhibited the germination of Vellozia species under all conditions tested. GA, FLU and FLU + GA₃ stimulated germination in the dark at 25 °C (GA₄ being more effective than GA₃). PAC reduced seed germination in V. caruncularis and V. alutacea, but did not affect germination of V. intermedia at 40 °C either under light or dark conditions. During imbibition in the dark, levels of active GAs decreased in the seeds of V. intermedia, but were not altered in those of V. alutacea. Incubation at 40 °C decreased ABA levels during imbibition in both V. caruncularis and V. alutacea.
• We conclude that the seeds of Vellozia species studied here require light or high temperature to germinate and ABA has a major role in the regulation of Vellozia seed germination in response to light and temperature.

     

Space use patterns of the burrowing echimyid rodent,Clyomys laticeps

Space use patterns of a population are a result of the set of movements of its individuals, which are directly influenced by their attributes and environmental conditions. Understanding space use patterns and its determinants may give us insights about a species’ ecology, social and mating systems. Although echimyid rodents display a variety of mating and social systems, movements of burrowing species are poorly studied due to their cryptic habits. Hence, in this study, we evaluated the effects of body mass, sex, and palm fruit availability on space use patterns of the burrowing echimyid Clyomys laticeps, by measuring their daily home range (DHR) and intensity of habitat use. In 9 months of study in a “cerrado campo sujo” site, we tracked 14 adults with the spool‐and‐line in a backpack method. Adult males had larger DHR size than females, probably as a response to greater body mass and reproductive behavior. Furthermore, adult females had greater intensity of habitat use, presenting site fidelity, which can be due to offspring care as a response to non‐seasonal reproduction observed in our study and/or due to nest site defense strategy to avoid energetic costs associated with burrow construction. Differently from expected, food availability (i.e., Allagoptera campestris palm fruits) had no influence on the space use patterns of C. laticeps. As in other herbivorous rodents, shifts in proportion of consumed food items according to their availability may explain the lack of this influence in our study. Our findings suggest that space use patterns of C. laticeps are mainly explained by behavioral and physiological differences between sexes, including body mass and reproductive strategies. Additionally, larger male movements and female site fidelity suggest a solitary behavior and a polygynous mating system, although further studies regarding spatial organization and genetic structure are necessary to support these suggestions.     

Competition for hosts between two hyperparasitoids of aphids,Dendrocerus laticeps andDendrocerus carpenteri (Hymenoptera: Megaspilidae): The benefit of interspecific host discrimination

The two hyperparasitoids of aphids, Dendrocerus carpenteri(Curtis) and Dendrocerus laticeps(Hedicke), differ in their interspecific host discrimination behavior: D. carpenterireadily accepts hosts for oviposition previously parasitized by D. laticeps,whereas D. laticepsoften refrains from ovipositing on hosts previously parasitized by D. carpenteri.The two species also differ in their competitive abilities: D. carpenteriis competitively superior to D. laticepswhen the time between ovipositions is 1 h. D. carpenteri's superiority probably arises from (a) the action of the venom produced by the female to paralyze the host, as evidenced by the comparison of emergence patterns from naturally vs artificially parasitized hosts, and (b) its more rapid egg development. Because of its competitive abilities, D. carpenterigains only limited benefit from discriminating interspecifically, at least when encountering a host parasitized by a competitively inferior species, such as D. laticeps.In contrast, D. laticepsgains considerable benefit from recognizing hosts previously parasitized by D. carpenteri,as the probability to produce offspring from such hosts is greatly reduced.     

Competitive Interactions between the Australian Native Fish Galaxiasmaculatus and the Exotic Mosquitofish Gambusiaholbrooki,in a Series of Laboratory Experiments

Competitive interactions between Galaxias maculatus, native to southeastern Australia, and Gambusia holbrooki, an exotic pest, were examined in relation to two types of artificial cover and a food source. Experiments were performed in an 800 l tank using photographic techniques. The relative distance of G. maculatus from cover or food source before and after the introduction of G. holbrooki were compared. Also, the proportions of the species were altered to examine the effects of unequal numbers on dominance behaviour. It was found that G. holbrooki was unable to out compete G. maculatus for either cover or food. The distance of G. maculatus from a food source was seen to increase following the introduction of G. holbrooki, when they outnumbered G. maculatus by 3 to 1. Although the distance from the food of␣G.␣maculatus increased following the introduction of G. holbrooki, in all cases the mean distance of G.␣maculatus from cover or food was less than that of G. holbrooki. Significant intra-species competition appeared to occur between G. maculatus and it may be that this competition had a greater effect than the competitive pressure G. holbrooki was able to place on the natives. This study revealed that the exotic pest species, G. holbrooki, could not out compete a small native Australian fish species.