Complex interactions and different possible pathways among functional components of the aquatic microbial world in Farasan Archipelago,Southern Red Sea,Saudi Arabia

This work aims to outline the dynamics of trophic links between the three main microbial components (bacteria, nanoflagellates, and ciliates) of the Farasan Archipelago in order to establish a baseline for future research in this area. The Farasan Archipelago lies along the southwestern coast of the Saudi Arabia, southern Red Sea between 16°20′–17°10′N and 41°30′–42°30′E and had been declared as marine and terrestrial reserve by the year 1996. Three different sites were chosen for this study, with each site visited bimonthly for 18 months from September 2016 to February 2018. Bacteria, nanoflagellates and ciliates were enumerated in order to explore the complex interactions between the main microbial categories in sea waters of the Farasan Archipelago. High abundances were recorded during the present study for bacteria (8.7 × 10⁶ bacteria ml⁻¹), nanoflagellates (3.7 × 10⁴ TNAN ml⁻¹) and ciliates (40.4 ciliates ml⁻¹). The paper discusses the various potential pathways controlling the complex interactions between these microbial groups in this part of the southern Red Sea. It is concluded that a linear trophic chain consisting of bacteria; heterotrophic nanoflagellates; filter feeding ciliates is a major route by which the production of bacteria is transferred to the higher consuming levels, thereby confirming the high importance of t bottom-up control (food supply), alongside top-down control (predation) in regulating bacterial abundances in the Farasan Archipelago. During the present investigation, each nanoflagellate ingested between 11 and 87 bacteria in one hour, while each ciliate consumed between 20 and 185 nanoflagellates every hour. These calculated grazing rates of protistan eukaryotes confirmed the role of heterotrophic nanoflagellates as the main consumers of bacteria, and the role of ciliates as the major control for the heterotrophic nanoflagellate population dynamics, and thus the top predators within the microbial plankton assemblage in the Farasan Archipelago.     

Microbial physiology and soil CO2 efflux after 9 years of soil warming in a temperate forest – no indications for thermal adaptations

Thermal adaptations of soil microorganisms could mitigate or facilitate global warming effects on soil organic matter (SOM) decomposition and soil CO₂ efflux. We incubated soil from warmed and control subplots of a forest soil warming experiment to assess whether 9 years of soil warming affected the rates and the temperature sensitivity of the soil CO₂ efflux, extracellular enzyme activities, microbial efficiency, and gross N mineralization. Mineral soil (0–10 cm depth) was incubated at temperatures ranging from 3 to 23 °C. No adaptations to long‐term warming were observed regarding the heterotrophic soil CO₂ efflux (R₁₀ warmed: 2.31 ± 0.15 μmol m^?2 s^?1, control: 2.34 ± 0.29 μmol m^?2 s^?1; Q₁₀ warmed: 2.45 ± 0.06, control: 2.45 ± 0.04). Potential enzyme activities increased with incubation temperature, but the temperature sensitivity of the enzymes did not differ between the warmed and the control soils. The ratio of C : N acquiring enzyme activities was significantly higher in the warmed soil. Microbial biomass‐specific respiration rates increased with incubation temperature, but the rates and the temperature sensitivity (Q₁₀ warmed: 2.54 ± 0.23, control 2.75 ± 0.17) did not differ between warmed and control soils. Microbial substrate use efficiency (SUE) declined with increasing incubation temperature in both, warmed and control, soils. SUE and its temperature sensitivity (Q₁₀ warmed: 0.84 ± 0.03, control: 0.88 ± 0.01) did not differ between warmed and control soils either. Gross N mineralization was invariant to incubation temperature and was not affected by long‐term soil warming. Our results indicate that thermal adaptations of the microbial decomposer community are unlikely to occur in C‐rich calcareous temperate forest soils.     

Differential effects of warming and nitrogen fertilization on soil respiration and microbial dynamics in switchgrass croplands

The mechanistic understanding of warming and nitrogen (N) fertilization, alone or in combination, on microbially mediated decomposition is limited. In this study, soil samples were collected from previously harvested switchgrass (Panicum virgatum L.) plots that had been treated with high N fertilizer (HN: 67 kg N ha^?1) and those that had received no N fertilizer (NN) over a 3‐year period. The samples were incubated for 180 days at 15 °C and 20 °C, during which heterotrophic respiration, δ¹³C of CO₂, microbial biomass (MB), specific soil respiration rate (R_s: respiration per unit of microbial biomass), and exoenzyme activities were quantified at 10 different collections time. Employing switchgrass tissues (referred to as litter) with naturally abundant ¹³C allowed us to partition CO₂ respiration derived from soil and amended litter. Cumulative soil respiration increased significantly by 16.4% and 4.2% under warming and N fertilization, respectively. Respiration derived from soil was elevated significantly with warming, while oxidase, the agent for recalcitrant soil substrate decomposition, was not significantly affected by warming. Warming, however, significantly enhanced MB and R_s indicating a decrease in microbial growth efficiency (MGE). On the contrary, respiration derived from amended litter was elevated with N fertilization, which was consistent with the significantly elevated hydrolase. N fertilization, however, had little effect on MB and R_s, suggesting little change in microbial physiology. Temperature and N fertilization showed minimal interactive effects likely due to little differences in soil N availability between NN and HN samples, which is partly attributable to switchgrass biomass N accumulation (equivalent to ~53% of fertilizer N). Overall, the differential individual effects of warming and N fertilization may be driven by physiological adaptation and stimulated exoenzyme kinetics, respectively. The study shed insights on distinct microbial acquisition of different substrates under global temperature increase and N enrichment.     

神农架海拔梯度上4种典型森林的土壤呼吸组分及其对温度的敏感性

量化森林土壤呼吸及其组分对温度的响应对准确评估未来气候变化背景下陆地生态系统的碳平衡极其重要。该文通过对神农架海拔梯度上常绿阔叶林、常绿落叶阔叶混交林、落叶阔叶林以及亚高山针叶林4种典型森林土壤呼吸的研究发现: 4种森林类型的年平均土壤呼吸速率和年平均异养呼吸速率分别为1.63、1.79、1.74、1.35 μmol CO₂·m^-2·s^-1和1.13、1.12、1.12、0.80 μmol CO₂·m^-2·s^-1。该地区的土壤呼吸及其组分呈现出明显的季节动态, 夏季最高, 冬季最低。4种森林类型中, 阔叶林的土壤呼吸显著高于针叶林, 但阔叶林之间的土壤呼吸差异不显著。土壤温度是影响土壤呼吸及其组分的主要因素, 二者呈显著的指数关系; 土壤含水量与土壤呼吸之间没有显著的相关关系。4种典型森林土壤呼吸的Q₁₀值分别为2.38、2.68、2.99和4.24, 随海拔的升高土壤呼吸对温度的敏感性增强, Q₁₀值随海拔的升高而增加。     

Microbial Communities Associated with Tree Bark Foliose Lichens: A Perspective on their Microecology

Tree‐bark, foliose lichens occur widely on a global scale. In some locales, such as forests, they contribute a substantial amount of biomass. However, there are few research reports on microbial communities including eukaryotic microbes associated with foliose lichens. Lichens collected from tree bark at 11 locations (Florida, New York State, Germany, Australia, and the Arctic) were examined to determine the density and C‐biomass of bacteria and some eukaryotic microbes, i.e. heterotrophic nanoflagellates (HNF) and amoeboid protists. A rich microbial diversity was found, including large plasmodial slime molds, in some cases exceeding 100 μm in size. The densities of HNF and amoeboid protists were each positively correlated with densities of bacteria, r = 0.84 and 0.80, respectively (p < 0.01, N = 11 for each analysis) indicating a likely bacterial‐based food web. Microbial densities (number/g lichen dry weight) varied markedly across the geographic sampling sites: bacteria (0.7–13.1 × 10⁸), HNF (0.2–6.8 × 10⁶) and amoeboid protists (0.4–4.6 × 10³). The ranges in C‐biomass (μg/g lichen dry weight) across the 11 sites were: bacteria (8.8–158.5), HNF (0.03–0.85), and amoeboid protists (0.08–540), the latter broad range was due particularly to absence or presence of large slime mold plasmodia.     

亚热带沟叶结缕草草坪土壤呼吸

随城市化进程加速,城市草坪生态系统释放CO2将对区域碳循环产生重要影响。采用LI-8100开路式土壤碳通量测量系统对亚热带沟叶结缕草草坪（Zoysia matrella）土壤呼吸进行为期1a的定位研究,结果表明：草坪土壤呼吸季节动态呈现为单峰曲线,全年土壤呼吸速率的变化范围在38.99—368.50 mg C?m-2?h-1之间,年通量为1684 g C?m-2?a-1。土壤温度、总生物量、以及二者的交互作用对土壤呼吸季节变化的解释程度接近,分别为89%、88%和90%,但仅二者的交互作用进入土壤呼吸的逐步回归方程,表明草坪土壤呼吸的季节变化主要受土壤温度与总生物量共同驱动。春末修剪草坪对土壤呼吸速率没有显著影响。在秋末无雨时期,浇水后1—2d土壤湿度对土壤呼吸的促进作用可掩盖同期降温的影响,使土壤呼吸速率显著升高。     

施肥对油茶园土壤呼吸和异养呼吸及其温度敏感性的影响

油茶是中国南方重要的木本食用油料树种,研究施肥对油茶园土壤呼吸及其温度敏感性的影响,对于估算中国南方典型种植园林温室气体排放及其对气候变化的响应具有重要意义。设置对照(CK)、施肥(OF)、断根(CK-T)和断根施肥(OF-T)4个处理,采用静态箱-气相色谱法,通过多年观测,分析探讨施肥对油茶园土壤呼吸和异养呼吸及其温度敏感性的影响。结果表明:(1)施肥对油茶园土壤呼吸和异养呼吸无显著影响。研究期间,各处理(OF、CK、OF-T、CK-T)土壤CO_2通量依次为(77.91±2.59)、(73.71±0.97)、(66.82±1.02)mg C m~(-2)h~(-1)和(66.84±3.94)mg C m~(-2)h~(-1);(2)各处理土壤呼吸温度敏感性(Q_(10))表现为OF-T(1.96±0.01)CK-T(1.79±0.03)OF(1.77±0.01)CK(1.75±0.03),其中,OF-T处理下Q_(10)显著高于其他3个处理,即施肥显著增加了断根处理土壤呼吸Q_(10);(3)施肥显著增加了土壤表层NH_4~+-N和NO_3~--N含量,Q_(10)与土壤表层NH_4~+-N和NO_3~--N含量表现出显著的正相关关系。     

Seasonal and annual respiration of a ponderosa pine ecosystem

The net ecosystem exchange of CO₂ between forests and the atmosphere, measured by eddy covariance, is the small difference between two large fluxes of photosynthesis and respiration. Chamber measurements of soil surface CO₂ efflux (F_s), wood respiration (F_w) and foliage respiration (F_f) help identify the contributions of these individual components to net ecosystem exchange. Models developed from the chamber data also provide independent estimates of respiration costs. We measured CO₂ efflux with chambers periodically in 1996–97 in a ponderosa pine forest in Oregon, scaled these measurements to the ecosystem, and computed annual totals for respiration by component. We also compared estimated half-hourly ecosystem respiration at night (F_nc) with eddy covariance measurements. Mean foliage respiration normalized to 10 °C was 0.20 μmol m^–2 (hemi-leaf surface area) s^–1, and reached a maximum of 0.24 μmol m^–2 HSA s^–1 between days 162 and 208. Mean wood respiration normalized to 10 °C was 5.9 μmol m^–3 sapwood s^–1, with slightly higher rates in mid-summer, when growth occurs. There was no significant difference (P > 0.10) between wood respiration of young (45 years) and old trees (250 years). Soil surface respiration normalized to 10 °C ranged from 0.7 to 3.0 μmol m^–2 (ground) s^–1 from days 23 to 329, with the lowest rates in winter and highest rates in late spring. Annual CO₂ flux from soil surface, foliage and wood was 683, 157, and 54 g C m^–2 y^–1, with soil fluxes responsible for 76% of ecosystem respiration. The ratio of net primary production to gross primary production was 0.45, consistent with values for conifer sites in Oregon and Australia, but higher than values reported for boreal coniferous forests. Below-ground carbon allocation (root turnover and respiration, estimated as F_s– litterfall carbon) consumed 61% of GPP; high ratios such as this are typical of sites with more water and nutrient constraints. The chamber estimates were moderately correlated with change in CO₂ storage in the canopy (F_stor) on calm nights (friction velocity u* < 0.25 m s^–1; R² = 0.60); F_stor was not significantly different from summed chamber estimates. On windy nights (u* > 0.25 m s^–1), the sum of turbulent flux measured above the canopy by eddy covariance and F_stor was only weakly correlated with summed chamber estimates (R² = 0.14); the eddy covariance estimates were lower than chamber estimates by 50%.     

Thawing permafrost increases old soil and autotrophic respiration in tundra: Partitioning ecosystem respiration using δ13C and ∆14C

Ecosystem respiration (R_eco) is one of the largest terrestrial carbon (C) fluxes. The effect of climate change on R_eco depends on the responses of its autotrophic and heterotrophic components. How autotrophic and heterotrophic respiration sources respond to climate change is especially important in ecosystems underlain by permafrost. Permafrost ecosystems contain vast stores of soil C (1672 Pg) and are located in northern latitudes where climate change is accelerated. Warming will cause a positive feedback to climate change if heterotrophic respiration increases without corresponding increases in primary production. We quantified the response of autotrophic and heterotrophic respiration to permafrost thaw across the 2008 and 2009 growing seasons. We partitioned R_eco using Δ¹⁴C and δ¹³C into four sources–two autotrophic (above – and belowground plant structures) and two heterotrophic (young and old soil). We sampled the Δ¹⁴C and δ¹³C of sources using incubations and the Δ¹⁴C and δ¹³C of R_eco using field measurements. We then used a Bayesian mixing model to solve for the most likely contributions of each source to R_eco. Autotrophic respiration ranged from 40 to 70% of R_eco and was greatest at the height of the growing season. Old soil heterotrophic respiration ranged from 6 to 18% of R_eco and was greatest where permafrost thaw was deepest. Overall, growing season fluxes of autotrophic and old soil heterotrophic respiration increased as permafrost thaw deepened. Areas with greater thaw also had the greatest primary production. Warming in permafrost ecosystems therefore leads to increased plant and old soil respiration that is initially compensated by increased net primary productivity. However, barring large shifts in plant community composition, future increases in old soil respiration will likely outpace productivity, resulting in a positive feedback to climate change.     

Pathways regulating decreased soil respiration with warming in a biocrust‐dominated dryland

A positive soil carbon (C)‐climate feedback is embedded into the climatic models of the IPCC. However, recent global syntheses indicate that the temperature sensitivity of soil respiration (R_S) in drylands, the largest biome on Earth, is actually lower in warmed than in control plots. Consequently, soil C losses with future warming are expected to be low compared with other biomes. Nevertheless, the empirical basis for these global extrapolations is still poor in drylands, due to the low number of field experiments testing the pathways behind the long‐term responses of soil respiration (R_S) to warming. Importantly, global drylands are covered with biocrusts (communities formed by bryophytes, lichens, cyanobacteria, fungi, and bacteria), and thus, R_S responses to warming may be driven by both autotrophic and heterotrophic pathways. Here, we evaluated the effects of 8‐year experimental warming on R_S, and the different pathways involved, in a biocrust‐dominated dryland in southern Spain. We also assessed the overall impacts on soil organic C (SOC) accumulation over time. Across the years and biocrust cover levels, warming reduced R_S by 0.30 μmol CO₂ m^?2 s^?1 (95% CI = ?0.24 to 0.84), although the negative warming effects were only significant after 3 years of elevated temperatures in areas with low initial biocrust cover. We found support for different pathways regulating the warming‐induced reduction in R_S at areas with low (microbial thermal acclimation via reduced soil mass‐specific respiration and β‐glucosidase enzymatic activity) vs. high (microbial thermal acclimation jointly with a reduction in autotrophic respiration from decreased lichen cover) initial biocrust cover. Our 8‐year experimental study shows a reduction in soil respiration with warming and highlights that biocrusts should be explicitly included in modeling efforts aimed to quantify the soil C–climate feedback in drylands.     

Soil respiration in a Mediterranean oak forest at different developmental stages after coppicing

To assess the variation of soil respiration at different forest stages we measured it in a coppiced oak (Quercus cerris L.) chronosequence in central Italy during two campaigns, spanning 2 successive years, in four stands at different stages of the rotation: 1 year (S1), 5 years (S5), 10 years (S10) and 17 years (S17) after coppicing. The contribution of the different components of soil respiration flux (aboveground litter, belowground decomposition soil organic matter and root respiration) was estimated by a paired comparison of manipulative experiments between the recently coppiced stand (S1) and mature stand (S17). Ninety percent of soil respiration values were between 1.7 and 7.8 μmol m^?2 s^?1, with an overall mean (±SD) of 4.0±2.7 μmol m^?2 s^?1. Spatial variation of soil respiration was high (CV=44.9%), with a mean range (i.e. patch size) of 4.8±2.7 m, as estimated from a semivariance analysis. In the absence of limitation by soil moisture, soil respiration was related to soil temperature with the exponential Q₁₀ model (average Q₁₀=2.25). During summer, soil moisture constrained soil respiration and masked its dependence on soil temperature. Soil respiration declined over the years after coppicing. Assuming a linear decline with stand age, we estimated a reduction of 24% over a 20‐year‐rotation cycle. The response of soil respiration to temperature also changed with age of the stands: the Q₁₀ was estimated to decrease from 2.90 in S1 to 2.42 in S17, suggesting that different components or processes may be involved at different developmental stages. The contribution of heterotrophic respiration to total soil respiration flux was relatively larger in the young S1 stand than in the mature S17 stand.     

Abundance and biomass of heterotrophic microorganisms in Lake Tanganyika

1. This study focused on heterotrophic microorganisms in the two main basins (north and south) of Lake Tanganyika during dry and wet seasons in 2002. Bacteria (81% cocci) were abundant (2.28–5.30 × 10⁶ cells mL^?1). During the dry season, in the south basin, bacterial biomass reached a maximum of 2.27 g C m^?2 and phytoplankton biomass was 3.75 g C m^?2 (integrated over a water column of 100 m). 2. Protozoan abundance was constituted of 99% of heterotrophic nanoflagellates (HNF). Communities of flagellates and bacteria consisted of very small but numerous cells. Flagellates were often the main planktonic compartment, with a biomass of 3.42–4.43 g C m^?2. Flagellate biomass was in the same range and often higher than the total autotrophic biomass (1.60–4.72 g C m^?2). 3. Total autotrophic carbon was partly sustained by the endosymbiotic zoochlorellae Strombidium. These ciliates were present only in the euphotic zone and usually contributed most of the biomass of ciliates. 4. Total heterotrophic ciliate biomass ranged between 0.35 and 0.44 g C m^?2. In 2002, heterotrophic microorganisms consisting of bacteria, flagellates and ciliates represented a large fraction of plankton. These results support the hypothesis that the microbial food web contributes to the high productivity of Lake Tanganyika. 5. As the sole source of carbon in the pelagic zone of this large lake is phytoplankton production, planktonic heterotrophs ultimately depend on autochthonous organic carbon, most probably dissolved organic carbon (DOC) from algal excretion.     

Spatiotemporal heterogeneity of soil and sediment respiration in a river‐floodplain mosaic (Tagliamento,NE Italy)

1. In their natural state, river floodplains are composed of a complex mosaic of contrasting aquatic and terrestrial habitats. These habitats are expected to differ widely in their properties and corresponding ecological processes, although empirical data on their capacity to produce, store and transform organic matter and nutrients are limited. 2. The objectives of this study were (i) to quantify the spatiotemporal variation of respiration, a dominant carbon flux in ecosystems, in a complex river floodplain, (ii) to identify the environmental drivers of respiration within and among floodplain habitat types and (iii) to calculate whole‐floodplain respiration and to put these values into a global ecosystem context. 3. We measured soil and sediment respiration (sum of root and heterotrophic respiration; SR) throughout an annual cycle in two aquatic (pond and channel) and four terrestrial (gravel, large wood, vegetated island and riparian forest) floodplain habitat types in the island‐braided section of the near‐natural Tagliamento River (NE Italy). 4. Floodplain habitat types differed greatly in substratum composition (soil to coarse gravel), organic matter content (0.63 to 4.1% ash‐free dry mass) and temperature (seasonal range per habitat type: 8.6 to 33.1 °C). Average annual SR ranged from 0.54 ± 1.56 (exposed gravel) to 3.94 ± 3.72 μmol CO₂ m^?2 s^?1 (vegetated islands) indicating distinct variation in respiration within and among habitat types. Temperature was the most important predictor of SR. However, the Q₁₀ value ranged from 1.62 (channel habitat) to 4.57 (riparian forest), demonstrating major differences in habitat‐specific temperature sensitivity in SR. 5. Total annual SR in individual floodplain habitats ranged from 160 (ponds) to 1205 g C m^?2 (vegetated islands) and spanned almost the entire range of global ecosystem respiration, from deserts to tropical forests.     

Net ecosystem exchange modifies the relationship between the autotrophic and heterotrophic components of soil respiration with abiotic factors in prairie grasslands

We investigated the relationships of net ecosystem carbon exchange (NEE), soil temperature, and moisture with soil respiration rate and its components at a grassland ecosystem. Stable carbon isotopes were used to separate soil respiration into autotrophic and heterotrophic components within an eddy covariance footprint during the 2008 and 2009 growing seasons. After correction for self‐correlation, rates of soil respiration and its autotrophic and heterotrophic components for both years were found to be strongly influenced by variations in daytime NEE – the amount of C retained in the ecosystem during the daytime, as derived from NEE measurements when photosynthetically active radiation was above 0 μmol m^?2 s^?1. The time scale for correlation of variations in daytime NEE with fluctuations in respiration was longer for heterotrophic respiration (36–42 days) than for autotrophic respiration (4–6 days). In addition to daytime NEE, autotrophic respiration was also sensitive to soil moisture but not soil temperature. In contrast, heterotrophic respiration from soils was sensitive to changes in soil temperature, soil moisture, and daytime NEE. Our results show that – as for forests – plant activity is an important driver of both components of soil respiration in this tallgrass prairie grassland ecosystem. Heterotrophic respiration had a slower coupling with plant activity than did autotrophic respiration. Our findings suggest that the frequently observed variations in the sensitivity of soil respiration to temperature or moisture may stem from variations in the proportions of autotrophic and heterotrophic components of soil respiration. Rates of photosynthesis at seasonal time scales should also be considered as a driver of both autotrophic and heterotrophic soil respiration for ecosystem flux modeling.     

A paired study of prairie carbon stocks, fluxes, and phenology: comparing the world's oldest prairie restoration with an adjacent remnant

We measured carbon (C) stocks and fluxes and vegetation phenology in the world's oldest prairie restoration (∼65 years) and an adjacent prairie remnant in southern Wisconsin from 2001–2004 to quantify structural and functional differences. While the species distributions and frequency differed, the number of species measured per 1 m² quadrat were not significantly different (15.8±4.4 and 14.1±2.1 for remnant and planted [order for all reported values in abstract]; P=0.29), and the annual average aboveground net primary productivity (271±51 and 330±55 g C m⁻²) and peak leaf area index (2.9–4.9 m² m⁻²) were comparable under similar fire management. Total root biomass was not significantly different in 2002 (1736±1062 and 1690±459 g dry matter m⁻²) or 2003 (3029±2081 and 2146±898 g m⁻²), but annual average soil respiration (1229±77 and 1428±24 g C m⁻² yr⁻¹) was significantly higher in the restoration (P<0.0001). However, the prairie remnant contained 37% greater soil C (P<0.0001) in the top 25 cm. Soil respiration response to 10 cm soil temperature (Q₁₀) varied with respect to prairie and soil moisture conditions as annual Q₁₀ values ranged from 2.5 to 3.6. We calculated a range of net ecosystem production (NEP) values using estimated heterotrophic respiration and three root turnover values. Average NEP varied from −1.4 to 1.9 and −2.3 to 1.3 Mg C ha⁻¹ yr⁻¹ for the remnant and planted prairies, respectively. While these two prairies share similar structural components and functional attributes, the large uncertainty in NEP casts doubt as to whether we can verify these prairies as C sources or sinks without direct measures of heterotrophic respiration and root turnover. We argue that quantitative studies of C exchange in prairies, which differ in restoration methodology, management intensity, and fire frequency, are needed to solidify the relationship between prairie structure and potentially desired functions such as C sequestration.     

Arbuscular Mycorrhizal Fungi and Rhizospheric Bacteria Diversity Along an Altitudinal Gradient in South American Puna Grassland

Rhizospheric soil samples were taken from Puna native grasses along an altitudinal gradient. Biodiversity of arbuscular mycorrhizal fungi (AMF) and associated bacteria was analyzed considering altitude and grasses photosynthetic pathways (metabolic type C₃, C₄). Cultivation-dependent approaches were applied to obtain further information about the phylogeny of the dominating cultivable aerobic–heterotrophic bacteria communities present in rhizospheric soil samples. In average, the bacterial count ranged between 1.30 × 10² and 8.66 × 10⁴ CFU g⁻¹ of dry weight of soil. Individual bacterial colonies of aerobic heterotrophic bacteria grown on R2A medium were morphologically grouped and identified as typical soil bacteria belonging to the genera Bacillus, Pseudomonas, and Arthrobacter. Ten AMF taxa were found: Acaulospora sp., A. laevis, A. spinosa, Gigaspora sp., Gi. ramisporophora, Glomus sp., Gl. aggregatum, Gl. ambisporum, Gl. sinuosum, and Scutellospora biornata. AMF diversity decreased with altitude.     

Net heterotrophy in Faroe Islands clear-water lakes: causes and consequences for bacterioplankton and phytoplankton

1. Five oligotrophic clear‐water lakes on the Faroe Islands were studied during August 2000. Algal and bacterial production rates, community respiration, and CO₂ saturation were determined. In addition, we examined the plankton community composition (phytoplankton and heterotrophic nanoflagellates) and measured the grazing pressure exerted by common mixotrophic species on bacteria. 2. High respiration to primary production (6.6–33.2) and supersaturation of CO₂ (830–2140 μatm) implied that the lakes were net heterotrophic and that the pelagic heterotrophic plankton were subsidised by allochthonous organic carbon. However, in spite of the apparent high level of net heterotrophy, primary production exceeded bacterial production and the food base for higher trophic levels appeared to be mainly autotrophic. 3. We suggest that the observed net heterotrophy in these lakes was a result of the oligotrophic conditions and hence low primary production in combination with an input of allochthonous C with a relatively high availability. 4. Mixotrophic phytoplankton (Cryptomonas spp., Dinobryon spp. and flagellates cf. Ochromonas spp.) constituted a large percentage of the plankton community (17–83%), possibly as a result of their capacity to exploit bacteria as a means of acquiring nutrients in these nutrient poor systems.     

Seasonal dynamics of the planktonic community in Lake Druzhby, Princess Elizabeth Land, Eastern Antarctica

1. The temporal abundance and composition of the plankton of a continental Antarctic lake (Lake Druzhby) situated in the Vestfold Hills, Eastern Antarctica was investigated from December 1992 to December 1993. The system was dominated by microbial plankton (cyanobacteria, heterotrophic bacteria and protozoans) with few metazoans. 2. Chlorophyll a concentrations ranged between 0.15 and 1.1 μg l^–1 and showed highest levels from late winter to spring. 3. Heterotrophic bacteria ranged between 75 and 250 × 10⁶ l^–1 with highest abundances in late winter/spring. Mean bacterial biovolumes showed considerable seasonal variation (0.05–0.31 μm³). Largest biovolumes occurred in summer and this was the time of highest community biomass. 4. Heterotrophic nanoflagellates reached highest abundances in late summer (maximum 14 × 10⁵ l^–1). Their mean biovolume also exhibited considerable seasonal variation, ranging between 1.77 and 27.0 μm³, with largest size resulting in community biomass peaking in early summer. Ciliated protozoa were poorly represented and sparse. Phototrophic nanoflagellates were sparse in this lake; instead the phototrophic plankton was dominated by a small rod-shaped cyanobacterium which constituted the largest carbon pool in the system. It was common throughout the year, its biomass peaking in autumn. Its presence is discussed in relation to lake morphometry and light climate. 5. Heterotrophic flagellate grazing rates ranged from 6.78 bacteria cell^–1 day^–1 at 2 °C to 11.8 bacteria cell^–1 day^–1 at 4 °C. They remove around 2% of the bacterial carbon pool per day during summer and winter. 6. Nutrient levels were low and recorded in pulses. Dissolved and particulate organic carbon were also low, usually less than 3 mg l^–1 and 600 μg l^–1, respectively. The carbon pools were derived from autochthonous sources. This lake system is driven by bottom-up forces and lacks top-down control, which fits into the picture currently seen for continental Antarctic lakes.     

PHOTOSYNTHESIS AND RESPIRATION OF THE CONCHOCELIS STAGE OF ALASKAN PORPHYRA (BANGIALES,RHODOPHYTA) SPECIES IN RESPONSE TO ENVIRONMENTAL VARIABLES1

Photosynthesis and respiration of three Alaskan Porphyra species, P. abbottiae V. Krishnam., P. pseudolinearis Ueda species complex (identified as P. “pseudolinearis” below), and P. torta V. Krishnam., were investigated under a range of environmental parameters. Photosynthesis versus irradiance (P–I) curves revealed that maximal photosynthesis (P_max), irradiance at maximal photosynthesis (I_max), and compensation irradiance (I_c) varied with salinity, temperature, and species. The P_max of Porphyra abbottiae conchocelis varied between 83 and 240 μmol O₂ · g dwt^?1 · h^?1 (where dwt indicates dry weight) at 30–140 μmol photons · m^?2 · s^?1 (I_max) depending on temperature. Higher irradiances resulted in photoinhibition. Maximal photosynthesis of the conchocelis of P. abbottiae occurred at 11°C, 60 μmol photons · m^?2·s^?1, and 30 psu (practical salinity units). The conchocelis of P. “pseudolinearis” and P. torta had similar P_max values but higher I_max values than those of P. abbottiae. The P_max of P. “pseudolinearis” conchocelis was 200–240 μmol O₂ · g dwt^?1 · h^?1 and for P. torta was 90–240 μmol O₂ · g dwt^?1 · h^?1. Maximal photosynthesis for P. “pseudolinearis” occurred at 7°C and 250 μmol photons · m^?2 · s^?1 at 30 psu, but P_max did not change much with temperature. Maximal photosynthesis for P. torta occurred at 15°C, 200 μmol photons · m^?2 · s^?1, and 30 psu. Photosynthesis rates for all species declined at salinities <25 or >35 psu. Estimated compensation irradiances (I_c) were relatively low (3–5 μmol · photons · m^?2 · s^?1) for intertidal macrophytes. Porphyra conchocelis had lower respiration rates at 7°C than at 11°C or 15°C. All three species exhibited minimal respiration rates at salinities between 25 and 35 psu.     

Fluctuating water levels control water chemistry and metabolism of a charophyte‐dominated pond

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