甘蓝型油菜芥酸含量的SSR标记分析

目的：探讨高芥酸材料与低芥酸材料杂交效果,为促进高芥酸油菜育种的研究。方法：采用高芥酸材料与低芥酸材料杂交的F2群体作为材料,研究其遗传性状,并对亲本间的芥酸含量进行了SSR标记分析。结果：发现F2群体中的单株芥酸含量受两对基因控制,其遗传规律符合由一对基因控制的分离比例,得到CB10364、Ra2-E12两个共显性标记。结论：CB10364标记与芥酸含量紧密连锁,单株带型为CB10364-a的芥酸含量〈6%,单株带型为CB10364-h的芥酸含量6%～36%,带型为CB10364-b的芥酸含量〉36%,能较好的区分群体的芥酸含量,该结果可促进高芥酸油菜的育种研究。     

甘蓝型油菜芥酸含量的SSR 标记分析

目的:探讨高芥酸材料与低芥酸材料杂交效果,为促进高芥酸油菜育种的研究。方法:采用高芥酸材料与低芥酸材料杂交的F2群体作为材料,研究其遗传性状,并对亲本间的芥酸含量进行了SSR标记分析。结果:发现F2群体中的单株芥酸含量受两对基因控制,其遗传规律符合由一对基因控制的分离比例,得到CB10364、Ra2-E12两个共显性标记。结论:CB10364标记与芥酸含量紧密连锁,单株带型为CB10364-a的芥酸含量<6%,单株带型为CB10364-h的芥酸含量6%～36%,带型为CB10364-b的芥酸含量>36%,能较好的区分群体的芥酸含量,该结果可促进高芥酸油菜的育种研究。     

甘蓝型油菜花瓣缺失基因的图谱定位

在无花瓣品系APT02和正常有花瓣品种中双4号构建的的F2分离群体中,运用AFLP和SRAP两种标记技术对甘蓝型油菜花瓣缺失基因进行分子标记和图谱定位。在两亲本间筛选20对AFLP引物和170对SRAP 引物,进一步通过BSA法筛选,获得了与甘蓝型油菜花瓣缺失基因WHB连锁的1个SRAP标记e8m3_4（600bp）和1个AFLP标记E3247_15（150bp）,标记与基因WHB之间的遗传距离分别为5 cM和13.5cM;构建了一个甘蓝型油菜(Brassica napus.L )的分子标记遗传连锁图谱,该图谱共包含213个AFLP标记、56个SRAP标记和1个形态标记,分布于17个主要连锁群、两个三联体和4个连锁对中,遗传图距总长2487.1cM,标记间平均距离为10.09 cM。通过图谱定位,控制花瓣缺失性状的基因WHB被定位到第4连锁群(LG4)上。     

甘蓝型黄籽油菜种皮色泽QTL作图

甘蓝型黄籽油菜具有低纤维、高蛋白及高含油量的优点,因而己成为广大油菜育种工作者研究的重点之一。利用甘蓝型黑籽品系油研2号作父本,计蓝型黄籽品系GH06为母本,获得132个单株的F2群体;以AFLP和SSR为主要分析方法,构建了包括164个标记的甘蓝型油菜遗传连锁图谱,其中包括125个AFLP标记、37个SSR标记及一个RAPD和一个SCAR标记,分布在19个连锁群上,覆盖油菜基因组2549．8cM,标记间平均距离15．55cM。利用多区间作图法,对种皮色泽QTL进行分析,在第5及第19连锁群上各检测到一个QTL位点,分别解释表型变异46％及30．9％。     

甘蓝型油菜千粒重性状的QTL初步定位研究

千粒重是油菜重要的产量相关性状之一,构建油菜遗传连锁图谱是研究其产量性状基因的前提。本研究利用小孢子培养技术,选育出了甘蓝型油菜大粒品系(G-42)和小粒品系(7-9)的纯合DH系DH-G-42和DH-7-9,其千粒重分别为6.24 g和2.42 g,二者比值达2.58。以DH-G-42为母本、DH-7-9为父本,构建了含190个单株的F2遗传作图群体,利用SSR和SRAP标记技术绘制遗传连锁图谱,该图谱共包含20个连锁群,涉及128个SSR标记和100个SRAP标记,图谱总长1546.6cM,标记间平均图距为6.78cM。本研究共检测到3个与千粒重性状相关的QTL,分别位于A9和C1连锁群,其中qSW-A9-1和qSW-A9-2贡献率分别达到10.98%和27.45%,均可视为控制粒重的主效QTL。本研究为后续进行油菜千粒重性状QTL的精细定位分析、分子标记辅助选择育种及新基因的克隆等奠定了基础。     

印度南瓜果皮和果肉颜色遗传分析及基因定位

以印度南瓜‘98-2-351’与‘06820-1’杂交构建F2群体,对亲本及各世代群体成熟果实果皮和果肉颜色进行调查、统计分析。结果表明:F2群体中果皮桔红色和灰色的分离比呈3∶1,说明果皮灰色是由单隐性基因控制;F2群体中果肉黄色和白色的分离比呈3∶1,说明果肉白色也是由单隐性基因控制。利用群体分离分析法结合隐性群体分析法,采用SSR分子标记,找到了2个与控制灰色果皮基因位点CmRc紧密连锁的SSR标记(PU078072和PU013839),其连锁遗传距离分别为5.9cM和14.5cM;同时找到了1个与控制白色果肉基因位点CmFc紧密连锁的SSR标记PU132712,其连锁遗传距离为6.7cM。本研究为进一步筛选与控制印度南瓜果皮和果肉颜色基因更加紧密连锁的分子标记及相关基因的精确定位奠定了基础。     

栽培稻F1花粉不育基因座S—b的PCR标记定位

栽培稻 (OryzasativaL .)杂种F1花粉不育性至少由 6个基因座位所控制。为了定位其中的一个基因座位S b ,选用了 15 8个微卫星标记对粳型品种“台中 6 5”及其近等基因系TISL2之间的多态性进行了分析。结果发现第 5染色体短臂上的RM13在亲本间存在多态性。连锁分析表明 ,RM13与S b座位紧密连锁。根据微卫星标记分析的结果 ,在RGP(RiceGenomeResearchProgramofJapan)发表的遗传图谱的相应位置上选取了 11个RFLP标记 ,利用这些标记的末端序列设计特异PCR引物 ,进行ALP (ampliconlengthpolymorphism)分析 ,结果 11对引物均没有ALP。用6种四碱基识别位点的限制性内切酶进行PBR(PCR_basedRFLP)分析 ,发现由R2 2 13S和R830两克隆设计的STS(sequence_taggedsite)标记在T6 5与TISL2之间存在酶切多态性。R830STS、RM13和R2 2 13SSTS与S b座位的遗传距离分别为 3.3cM (centiMorgan)、5 .2cM和 5 .5cM。这些以PCR为基础的分子标记可以直接应用于分子标记辅助选择中 ,从而建立了基因定位与分子标记辅助选择一体化的技术体系 ,使S b座位在育种中可以得到有效的利用     

大豆重组自交系群体（ZKS-HX）遗传图谱的构建和形态标记的定位

以大豆品种‘合丰25’为母本,半野生大豆‘新民6号’为父本杂交得到的F2-9代122个重组自交系为试验材料,构建了含有124个SSR标记、1个EST标记、3个形态学标记的大豆遗传图谱。此图谱覆盖的基因组长度为2348．3cM．标记间平均距离为18．3cM。每个连锁群长度范围为15．1～195．9cM之间,标记数范围2—10个。本文将控制茸毛色（Pb）基因定位于LG06-C2连锁群上,与Sat_40x2的遗传距离为39．6cM;控制叶耳g（Le）、花色（4W,）基因定位于LG12-F连锁群上,它们之间的遗传距离为9．9cM,与两边的Satt348、Sat_240标记遗传距离分别为13．3cM和10．5cM。     

利用CRISPR/Cas9技术创制高油酸甘蓝型油菜新种质

在低硫苷低芥酸的双低甘蓝型油菜基础上,培育稳定的高油酸油菜是当前重要的育种目标之一,本研究通过利用CRISPR/Cas9基因编辑对湖南农业大学选育的品种湘油15号(XY15)进行品种改良。BnaFAD2和BnaFAE1是油酸合成不饱和脂肪酸和超长链脂肪酸的两个关键基因。利用CRISPR/Cas9基因编辑系统与高效油菜转化技术相结合,对甘蓝型油菜XY15的BnaFAD2.A05、BnaFAD2.C05、BnaFAE1.A08和BnaFAE1.C03同时进行基因编辑,获得了7株T0代转基因植株,通过靶基因克隆测序,发现均未发生基因编辑。然而,在T1代植株中发现并检测到了基因编辑的发生,BnaFAD2.A05、BnaFAD2.C05、BnaFAE1.A08和BnaFAE1.C03的总基因编辑效率分别为38.89%、27.78%、22.22%、30.56%。在T2代植株中,筛选到了5株4个靶基因均发生了突变,且无外源基因的突变体材料Cas9-1-12-4、Cas9-1-12-5、Cas9-2-7-11、Cas9-5-5-3、Cas9-6-6-1,它们的相对油酸含量为68.69%、80.16%、75.82%、75.97%、74.37%,相比于野生型XY15(相对油酸含量为62.04%)均有显著提高。     

芥菜型油菜芥酸和廿碳烯酸的遗传

本试验研究了芥菜型油菜种子油中芥酸和廿碳烯酸含量的遗传。结果表明,芥菜型油菜芥酸含量 和廿碳烯酸含量的遗传行为与甘蓝型油菜十分相似。二者均受种子的胚基因型控制,与母体植株的基 因型无关。芥酸含盘受两对显性效应很小的加性基因控制,廿碳烯酸受两对具有重叠作用的显性基因 控制。低芥酸总是与低廿碳烯酸相联系。世代均值分析表明,芥酸符合加性显性模型,以加性效应为 主。廿碳烯酸不符合加显模型,但符合二基因互作模型,基因效应以显性作用为主。     

Identification of a major gene and RAPD markers for yellow seed coat colour in Brassica napus.

The development of yellow-seeded Brassica napus for improving the canola-meal quality characteristics of lower fibre content and higher protein content has been restricted because no yellow-seeded forms of B. napus exist, and their conventional development requires interspecific introgression of yellow seed coat colour genes from related species. A doubled-haploid (DH) population derived from the F1 generation of the cross 'Apollo' (black-seeded) x YN90-1016 (yellow-seeded) B. napus was analysed via bulked segregant analysis to identify molecular markers associated with the yellow-seed trait in B. napus for future implementation in marker-assisted breeding. A single major gene (pigment 1) flanked by eight RAPD markers was identified co-segregating with the yellow seed coat colour trait in the population. This gene explained over 72% of the phenotypic variation in seed coat colour. Further analysis of the yellow-seeded portion of this DH population revealed two additional genes favouring 'Apollo' alleles, explaining 11 and 8.5%, respectively, of the yellow seed coat colour variation. The data suggested that there is a dominant, epistatic interaction between the pigment I locus and the two additional genes. The potential of the markers to be implemented in plant breeding for the yellow-seed trait in B. napus is discussed.     

Identification of FAD2 and FAD3 genes in Brassica napus genome and development of allele-specific markers for high oleic and low linolenic acid contents

Modification of oleic acid (C18:1) and linolenic acid (C18:3) contents in seeds is one of the major goals for quality breeding after removal of erucic acid in oilseed rape (Brassica napus). The fatty acid desaturase genes FAD2 and FAD3 have been shown as the major genes for the control of C18:1 and C18:3 contents. However, the genome structure and locus distributions of the two gene families in amphidiploid B. napus are still not completely understood to date. In the present study, all copies of FAD2 and FAD3 genes in the A- and C-genome of B. napus and its two diploid progenitor species, Brassica rapa and Brassica oleracea, were identified through bioinformatic analysis and extensive molecular cloning. Two FAD2 genes exist in B. rapa and B. oleracea, and four copies of FAD2 genes exist in B. napus. Three and six copies of FAD3 genes were identified in diploid species and amphidiploid species, respectively. The genetic control of high C18:1 and low C18:3 contents in a double haploid population was investigated through mapping of the quantitative trait loci (QTL) for the traits and the molecular cloning of the underlying genes. One major QTL of BnaA.FAD2.a located on A5 chromosome was responsible for the high C18:1 content. A deleted mutation in the BnaA.FAD2.a locus was uncovered, which represented a previously unidentified allele for the high oleic variation in B. napus species. Two major QTLs on A4 and C4 chromosomes were found to be responsible for the low C18:3 content in the DH population as well as in SW Hickory. Furthermore, several single base pair changes in BnaA.FAD3.b and BnaC.FAD3.b were identified to cause the phenotype of low C18:3 content. Based on the results of genetic mapping and identified sequences, allele-specific markers were developed for FAD2 and FAD3 genes. Particularly, single-nucleotide amplified polymorphisms markers for FAD3 alleles were demonstrated to be a reliable type of SNP markers for unambiguous identification of genotypes with different content of C18:3 in amphidiploid B. napus.     

Analysis of QTLs for erucic acid and oil content in seeds on A8 chromosome and the linkage drag between the alleles for the two traits in Brassica napus

The history of canola breeding began with the discovery of germplasm with low erucic acid content in seeds of spring forage cultivar in tbe 1950's.FAEI,mutations led to a dramatic decrease of the seed erucic acid content in Arabidopsis thaliana.The products of the two FAEI loci.BnA8.FAEI and BnC3.FAEI,showed additive effects to the level of erucic acid content in oilseed rape.Previous research believed that the pleiotropy of FAEI was responsible for the decrease in seed oil content along with the reduction of seed erucic acid content in the modern cultivars.TN DH population was developed from a canola cultivar Tapidor and a Chinese traditional cultivar Ningyou7.The population had been tested in 10 and 11 environments to map QTLs for the erucic acid content and oil content in seeds.As the map resolution increased,a novel QTL for seed erucic acid content was revealed,after Meta-analysis,7 cM away from the most significant seed erucic acid content QTL where BnA8.FAEI is located.Seven independent QTLs for seed oil content(qOC) were detected around the two seed erucic acid content QTLs(qEA)across 39.20 cM on linkage group A8.Two of the qOCs co-localized with the two qEAs,respectively,and were detected in a single environment.The otherfive qOCs were detected in 10 of ll environments independent of qEAs.Alleles from Tapidor in all the QTLs at the 0-39.20 cM region contributed negative effects to either erucic acid content or oil content in seeds.Parallel,genocontent source.Through rounds of crossbreeding with oil-cropped cultivars and intensive selection for multi generations,Tapidor still had the controlled by the five qEA-independent qOCs,with low seed erucic acid content.Ninety cultivars of B.napus from 8 countries were used to analyze the genetic drag with 9 molecular markers located in the QTL confidence intervals (24.04cM) on linkage group A8.It was noticed that more than 46% of the cultivars with low seed erucic acid content trait remained the genotype of low seed oil content at least in one locus.Backcross and marker-assisted selection could break the genetic drag between the low oil content and erucic acid in seeds in the process for breeding modern high seed oil content canola cultivars.     

Inheritance of seed colour and identification of RAPD and AFLP markers linked to the seed colour gene in rapeseed (Brassica napus L.)

In China Polima cytoplasmic male sterility (cms) is currently the most important hybrid system used for the breeding of hybrids. In an effort to develop yellow-seeded Polima cms restorer lines, we used yellow-seeded, doubled haploid (DH) line No.2127-17 as the gene source in crosses with two elite black-seeded Polima cms R lines, Hui5148-2 and 99Yu42, which originated from our breeding programme. The inheritance of seed colour was investigated in the F₂, BC₁ and F₁-derived DH progenies of the two crosses. Seed colour was found to be under the control of the maternal genotype and the yellow seed trait to be partially dominant over the black seed trait. Segregation analysis revealed a single gene locus for the partial dominance of yellow seed colour. Of 810 randomly amplified polymorphic DNA (RAPD) primers, 240 (29.6%) revealed polymorphisms between the parents. Of the 240 RAPD primers and 512 amplified fragment length polymorphism (AFLP) primer pairs, four RAPDs and 16 AFLP pairs showed polymorphisms between the bulks, with two RAPD and eight AFLP markers being identified in the vicinity of the seed-coat colour gene locus using a DH progeny population—derived from the cross Hui5148-2×No.2127-17—of 127 individuals in combination with the bulked segregant analysis strategy. Seven of these latter ten markers were linked to the allele for yellow seed, whereas the other three were linked to the allele for black seed. The seed-coat colour gene locus was bracketed by two tightly linked markers, EA02MG08 (2.4 cM) and S1129 (3.9 cM). The partial dominance and single gene control of the yellow seed-coat colour trait together with the available molecular markers will greatly facilitate the future breeding of yellow-seeded hybrid varieties.     

Development of an AFLP-based linkage map and localization of QTLs for seed fatty acid content in condiment mustard (Brassica juncea).

A genetic linkage map of Brassica juncea based on AFLP and RAPD markers was constructed using 131 F1-derived doubled-haploid (DH) plants from a cross between two mustard lines. The map included 273 markers (264 AFLP, 9 RAPD) arranged on 18 linkage groups, and covered a total genetic distance of 1641 cM; 18.3% of the AFLP markers showed a segregation distortion (P < 0.01). The markers with biased segregation were clustered on seven linkage groups. QTLs for oil contents, palmitic acid (16:0), stearic acid (18:0), oleic acid (18:1), linoleic acid (18:2), linolenic acid (18:3), eicosenoic acid (20:1), and erucic acid (22:1), were mapped on the AFLP linkage map. Correlation studies among fatty acids in the DH population and the localization of QTLs involved in their control indicated that a major gene located on linkage group (LG) 2 controlled the elongation step of erucic acid.     

Inheritance and variation of erucic acid content in a transgenic rapeseed (Brassica napus L.) doubled haploid population

Erucic acid (22:1) is a valuable renewable resource for the oleochemical industry. Currently available high erucic acid rapeseed cultivars contain only about 50% erucic acid in the seed oil. A substantial increase of the erucic acid content of the rapeseed oil could increase market prospects. The transgenic line TNKAT, over expressing the rapeseed fatty acid elongase gene (fae1) and expressing the Ld-LPAAT gene from Limnanthes douglasii was crossed with the line 6575-1 HELP (high erucic and low polyunsaturated fatty acid). A from the F₁ plants produced population of 90 doubled haploid (DH) lines was tested in a greenhouse with three replicates. Parental lines TNKAT and 6575-1 HELP contained 46 and 50% erucic acid in the seed oil, respectively. In the DH population the erucic acid content ranged between 35 and 59%. The Ld-LPAAT + Bn-fae1.1 transgene showed a 1:1 segregation. The transgenic DH lines contained up to 8% trierucolyglycerol, but surprisingly had a by 2.3% lower erucic acid content compared to the non-transgenic segregants. Results indicated that the ectopically expressed fae1.1 gene may not be functional. The DH population also showed a large quantitative variation for PUFA content ranging from 6 to 28% (TNKAT: 21%, 6575-1 HELP: 8%). Regression analysis showed that in the DH population a 10% reduction in PUFA content led to a 4.2% increase in erucic acid content. Development of locus specific PCR primers for the two resident erucic acid genes fae1.1 (A-genome) and fae1.2 genes (C-genome) of rapeseed allowed sequencing of the respective alleles from TNKAT and 6575-1 HELP. Single nucleotide polymorphisms were only found for the fae1.1 gene. Use of allele specific fae1.1 PCR primers, however, did not reveal a significant effect of the fae1.1 allele from either parent on erucic acid content. The high erucic acid low polyunsaturated fatty acid DH lines and the fae1 locus specific primers developed in the present study should be useful in future studies aimed at increasing erucic acid content in rapeseed.     

Restoring enzyme activity in nonfunctional low erucic acid Brassica napus fatty acid elongase 1 by a single amino acid substitution.

Genomic fatty acid elongation 1 (FAE1) clones from high erucic acid (HEA) Brassica napus, Brassica rapa and Brassica oleracea, and low erucic acid (LEA) B. napus cv. Westar, were amplified by PCR and expressed in yeast cells under the control of the strong galactose-inducible promoter. As expected, yeast cells expressing the FAE1 genes from HEA Brassica spp. synthesized very long chain monounsaturated fatty acids that are not normally found in yeast, while fatty acid profiles of yeast cells expressing the FAE1 gene from LEA B. napus were identical to control yeast samples. In agreement with published findings regarding different HEA and LEA B. napus cultivars, comparison of FAE1 protein sequences from HEA and LEA Brassicaceae revealed one crucial amino acid difference: the serine residue at position 282 of the HEA FAE1 sequences is substituted by phenylalanine in LEA B. napus cv. Westar. Using site directed mutagenesis, the phenylalanine 282 residue was substituted with a serine residue in the FAE1 polypeptide from B. napus cv. Westar, the mutated gene was expressed in yeast and GC analysis revealed the presence of very long chain monounsaturated fatty acids (VLCMFAs), indicating that the elongase activity was restored in the LEA FAE1 enzyme by the single amino acid substitution. Thus, for the first time, the low erucic acid trait in canola B. napus can be attributed to a single amino acid substitution which prevents the biosynthesis of the eicosenoic and erucic acids.     

Responses to olfactory and visual cues by over-wintered and summer generations of the pollen beetle, Meligethes aeneus

Abstract.  Behavioural responses to odours of oilseed rape in bud and flower stage and to green and yellow colours are studied for the two main phenological stages of pollen beetles, Meligethes aeneus , a major pest of oilseed rape, Brassica napus . Over-wintered individuals oviposit in buds of oilseed rape. Adults of the new generation (i.e. the summer generation) feed on flowers of different plant species before over wintering. In olfactometer experiments, the over-wintered beetles display a higher preference for odour of oilseed rape at the bud stage compared with the summer generation, both with and without colour stimuli. Flower odours are preferred in combination with yellow colour. Colour stimuli presented alone do not affect the behaviour. The summer generation beetles respond to both bud and flower odour. Adding colour stimuli changes the summer generations preference towards yellow and flower odour.