Genetic studies facilitated management decisions on the invasion of the ruddy duck in Europe

The ruddy duck (Oxyura jamaicensis), a stifftail native to the Americas, was introduced to the UK in the 1950s and has since been recorded in 22 western Palearctic countries. By 2000, the UK population peaked at nearly 6,000 individuals. In 1991, hybridisation with the native and globally threatened (IUCN Endangered) white-headed duck (Oxyura leucocephala), a stifftail restricted to the Mediterranean and Asia, was recorded in Spain and culling of hybrids and ruddy ducks began. Here we report on a series of genetic studies that have enabled and supported management decisions to the benefit of the white-headed duck. First, genetic data confirmed that these are two distinct species, each of which is more closely related to other stifftail species. Second, molecular studies indicated that ruddy ducks in Spain, Iceland and elsewhere in Europe were of captive origin and not descendants from vagrants from their native North America. Third, genetic methods were used to distinguish among different hybrid generations in Spain and detected no ruddy duck introgression in birds identified morphologically as white-headed ducks. Collectively, these results supported management decisions to eradicate ruddy ducks from Europe. Subsequently, a control programme reduced the UK population by over 95 % by 2010, and the arrival of ruddy ducks to Spain decreased from 21 birds in 2003 to two sightings in 2010–2011. However, increased efforts to control small ruddy duck populations elsewhere in Europe and Morocco are still required to ensure conservation of the white-headed duck. This case of invasion by hybridization demonstrates that successful control is feasible given early detection followed by a rapid response plan; it also shows the contribution of research to management and that to guarantee the conservation of an endangered native species action may be required in countries outside its distribution range.     

Hybridization between white-headed ducks and introduced ruddy ducks in Spain

The ruddy duck, Oxyura jamaicensis, was introduced to Great Britain in the mid-20th century and has recently spread to other Western European countries. In Spain, ruddy ducks hybridize with the globally endangered white-headed duck, Oxyura leucocephala. We assessed the effects of hybridization on the Spanish white-headed ducks, which constitute 25% of the global population of this species, using a panel of eight nuclear intron markers, 10 microsatellite loci, and mtDNA control region sequences. These data allowed parental individuals, F(1) hybrids, and the progeny of backcrossing to be reliably distinguished. We show that hybrids between the two species are fertile and produce viable offspring in backcrosses with both parental species. To date, however, we found no extensive introgression of ruddy duck genes into the Spanish white-headed duck population, probably due to the early implementation of an effective ruddy duck and hybrid control programme. We also show that genetic diversity in the expanding European ruddy duck population, which was founded by just seven individuals, exceeds that of the native Spanish white-headed duck population, which recently recovered from a severe bottleneck. Unless effective control of ruddy ducks is continued, genetic introgression will compromise the unique behavioural and ecological adaptations of white-headed ducks and consequently their survival as a genetically and evolutionary distinct species.     

Stepwise colonization of the Andes by Ruddy Ducks and the evolution of novel β‐globin variants

Andean uplift played a key role in Neotropical bird diversification, yet past dispersal and genetic adaptation to high‐altitude environments remain little understood. Here we use multilocus population genetics to study population history and historical demographic processes in the ruddy duck (Oxyura jamaicensis), a stiff‐tailed diving duck comprising three subspecies distributed from Canada to Tierra del Fuego and inhabiting wetlands from sea level to 4500 m in the Andes. We sequenced the mitochondrial DNA, four autosomal introns and three haemoglobin genes (α^A, α^D, β^A) and used isolation‐with‐migration (IM) models to study gene flow between North America and South America, and between the tropical and southern Andes. Our analyses indicated that ruddy ducks dispersed first from North America to the tropical Andes, then from the tropical Andes to the southern Andes. While no nonsynonymous substitutions were found in either α globin gene, three amino acid substitutions were observed in the β^A globin. Based on phylogenetic reconstruction and power analysis, the first β^A substitution, found in all Andean individuals, was acquired when ruddy ducks dispersed from low altitude in North America to high altitude in the tropical Andes, whereas the two additional substitutions occurred more recently, when ruddy ducks dispersed from high altitude in the tropical Andes to low altitude in the southern Andes. This stepwise colonization pattern accompanied by polarized β^A globin amino acid replacements suggest that ruddy ducks first acclimatized or adapted to the Andean highlands and then again to the lowlands. In addition, ruddy ducks colonized the Andean highlands via a less common route as compared to other waterbird species that colonized the Andes northwards from the southern cone of South America.     

The ruddy duck Oxyura jamaicensis in Europe: natural colonization or human introduction?

Native to North America, ruddy ducks Oxyura jamaicensis now occur in 21 countries in the western Palaearctic (including Iceland) and their expanding population threatens the native white-headed duck, Oxyura leucocephala, through hybridization and possibly competition for food and nest sites. We used mitochondrial DNA sequences and nuclear microsatellites to test whether the European ruddy duck population is descended solely from the captive population in the UK, which traces to seven individuals imported from the USA in 1948, or, alternatively, has been augmented by natural dispersal of birds from North America. Limited genetic diversity in the European population is consistent with a founder population as small as seven birds. In addition, shifts in allele frequencies at several loci, presumably due to genetic drift in the founding population, result in significant differentiation between the European and North American populations. Despite the recent separation of these populations, almost all individuals could be unambiguously assigned based on their composite genotypes, to one of two distinct populations, one comprising all of the European ruddy ducks we sampled (including those from Iceland and captive birds in the UK) and the other comprising all North American samples. Our results confirm that the European ruddy duck population is likely to derive solely from the captive population in the UK and we find no evidence of recent arrivals from North America or of admixture between ruddy ducks from Europe and North America.     

Molecular population genetics, phylogeography, and conservation biology of the mottled duck (Anas fulvigula)

The mottled duck (Anas fulvigula) is a year-round endemicresident of the Gulf Coast and one of two non-migratory dabbling ducksthat inhabit North America. To investigate population genetic structureof allopatric mottled duck populations, we collected 5' control regionsequences (bp 78–774) from the mitochondria of 219 mottled duckssampled at 11 widely spaced geographic localities in Texas, Louisiana,and Florida and compared them to each other and to homologous sequencesfrom 4 Mexican ducks (A. diazi), 13 American black ducks(A. rubripes), and 10 mallards (A. platyrhynchos). Weidentified 57 unique haplotypes composed of 665 or 666 nucleotides inthe 246 control region sequences. Of the 665 homologous positions,8.3% (n = 55) vary among haplotypes, and98.2% (n = 54) of these occur within the first351 nucleotides from the 5' end of the outgroup sequence.Neighbor-joining analysis shows a large distal clade (52.5% ofmottled ducks sampled in our study) composed of two reciprocallymonophyletic clades of mottled duck haplotypes, one of which is endemicto Texas and Louisiana and the other endemic to Florida. No mottledducks sampled in Florida occur in the clade composed of mottled ducksfrom Texas and Louisiana or vice versa, suggesting that (1) an enduringgeographic split has existed for many years between east and west, and(2) gene flow currently is non-existent (or at least undetectable)across the central Gulf Coast. The remaining 47.5% of mottledducks sampled in our study branch basally from this derived clade, showsubstantially less hierarchical structure, and fall into various lineagegroups of mixed species composition with no geographic orspecies-specific pattern. Pairwise F _ST valuescorroborate the pattern of strong differentiation observed betweenTexas/Louisiana and Florida. Our findings are consistent with apattern of partial lineage sorting from a polymorphic ancestral genepool reshuffled by hybridizing mallards. Control region data andpatterns of divergence in mallard-like species worldwide, furthermore,suggest that mottled ducks are close relatives of Mexican ducks, and inturn nested within black ducks. Genetic similarities to nominatemallards are less likely to be the product of common ancestry, but theresult of past hybridization with a dichromatic mallard ancestor thatinvaded North America from Asia many generations ago. Our findings haveseveral important consequences for the conservation biology of mottledducks across the Gulf Coast and our understanding of the phylogeographyof mallard-like species worldwide.     

PCK1 expression is correlated with the plasma glucose level in the duck

Phosphoenolpyruvate carboxykinase 1 (soluble) (PCK1) is a key gene in gluconeogenesis and glyceroneogenesis. Although its functions have been extensively studied in mice, bats and humans, little is known in ducks. Here, PCK1 functions were studied using a duck domestication model and a 48‐h fasting experiment. We found PCK1 expression significantly decreased in two breeds of domestic ducks (Jinyun Pockmark ducks and Cherry Valley ducks) as compared with wild ducks (Anas platyrhynchos). Simultaneously, plasma levels of glucose, triglycerides and free fatty acid in domestic ducks were lower than in wild ducks. When compared with fed ducks, the plasma triglyceride level was observed to be significantly decreased, while the glucose and free fatty acid levels remained constant in 48‐h fasting ducks. The expression analysis of gluconeogenic genes revealed that fructose‐1,6‐bisphosphatase genes (FBP1 and FBP2) and the glucose‐6‐phosphatase gene (G6PC2) were not changed, whereas PCK1 was significantly upregulated. In addition, the reported regulators of PCK1, including forkhead box A2 (FOXA2) gene and orphan nuclear receptor NR4A family genes (NR4A1, NR4A2 and NR4A3), exhibited similar expression levels between 48‐h fasting ducks and fed ducks, suggesting that PCK1 is not regulated by these genes in the duck under fasting conditions. In conclusion, PCK1 expression may affect plasma levels of glucose, triglycerides and free fatty acid during the duck domestication process. This work demonstrates for the first time in duck that PCK1 is a key gene in maintaining plasma glucose homeostasis during fasting and that the upregulated expression of PCK1 may be responsible for constant plasma free fatty acid level by the glyceroneogenesis process.     

Complex structural effects of two hemispheric climatic oscillators on the regional spatio-temporal expansion of a threatened bird

Links between climatic conditions in the eastern equatorial Pacific and extratropical ecological processes remain unexplored. The analysis of a 20‐year time series of spatial and numeric dynamics of a threatened Mediterranean bird suggests, however, that such couplings can be remarkably complex. By providing a new ecological time‐series modelling approach, we were able to dissect the joint effects of the El Niño/Southern Oscillation (ENSO), the North Atlantic Oscillation (NAO), regional weather, population density and stochastic variability on the expansion dynamics of the White‐headed duck (Oxyura leococephala) in Spain. Our results suggest that the spatial and numeric dynamics of ducks between peak brood emergence and wintering were simultaneously affected by different climatic phenomena during different phases of their global cycles, involving time lags in the numeric dynamics. Strikingly, our results point to both the NAO and the ENSO as potentially major factors simultaneously forcing ecological processes in the Northern Hemisphere, and suggest a new pathway for non‐additive effects of climate in ecology.     

Molecular identification of brood‐parasitic females reveals an opportunistic reproductive tactic in ruddy ducks

In many taxa, females lay eggs in the nests of other conspecifics. To determine the conditions under which conspecific brood parasitism develops, it is necessary to identify parasitic offspring and the females who produce them; however, for most systems parasitism can be difficult to observe and most genetic approaches have relatively low resolving power. In this study, we used protein fingerprinting from egg albumen and 10 microsatellite loci to genetically match parasitic ducklings to their mothers in a population of ruddy ducks (Oxyura jamaicensis). We found that 67% of nests contained parasitic offspring, and we successfully identified their mothers in 61% of the cases. Of the parasitic females identified, 77% also had nests of their own (i.e. a dual tactic, where females both nest and lay parasitically), and we found no evidence that parasitic females pursued a specialist (parasitism only) tactic. We also found that parasitic egg laying was not influenced by nest loss, predation or female condition. Thus, in contrast to most waterfowl studied to date, female ruddy ducks appear to lay parasitic eggs whenever the opportunity arises.     

Salt gland function in the common eider duck (Somateria mollissima)

The function of the supra-orbital salt gland was studied in the common eider duck (Somateria mollissima). The maximum salt-secreting capacity was determined in (1) wild ducks which had been living in a marine environment, (2) ducks reared in captivity on fresh water, and (3) ducks from group 2 adapted to salt water. The maximum secreting capacity was found by infusing a solution of NaCl (1000 mosmol·kg^-1) at increasing rates, from 0.691 to 1.671 mosmol·min^-1. Freshwater-adapted ducks secreted at a maximum rate of 0.785 mosmol·min^-1 (1500 mosmol·kg^-1). Adapted to salt water they increased their capacity, and the best duck secreted at a rate of 1215 mosmol·min^-1 (1600 mosmol·kg^-1). The best wild duck secreted at a rate of 1516 mosmol·min^-1. Ducks in group 3 were used to examine the response to a hyperosmotic or an isoosmotic infusion. The amount of salt (NaCl) given per unit time was the same. Given a hyperosmotic solution their salt glands secreted at a high rate: 30 min after the infusion had stopped the ducks had excreted 94% of the sodium infused, 92.9% via the salt gland. Given an isoosmotic solution they secreted at a rate about half the infusion rate: 30 min after cessation of infusion they had excreted 73% of the sodium, 42.9% via the salt gland and the rest by the kidneys.Abbreviations A II angiotensin II - AV I arginine vasotocin - ED freshwater-adapted ducks - FW fresh water - SD saltwater-adapted ducks - SW sea water - WD wild ducks     

Isolation and characterization of 18 microsatellites in the Peking duck (Anas platyrhynchos) and their application in other waterfowl species

We have isolated and characterized 18 microsatellite loci in the Peking duck (Anas platyrhynchos). The average number of alleles per locus was 3.5, ranging from one to six in domestic Peking ducks (n = 40). All of the markers were polymorphic in a sample of five mallards (A. platyrhynchos; two to eight alleles). Seventeen of the 18 markers amplified in Muscovy ducks (Cairina moschata) with 11 being polymorphic in our sample (n = 14). Amplification of the markers in different species comprising the subfamilies Anatinae and Anserinae indicates their potential value for population genetic applications in a wide range of waterfowl species.     

Phylogenetic relationships of Amazonetta,Speculanas, Lophonetta,and Tachyeres: four morphologically divergent duck genera endemic to South America

We studied the phylogenetic relationships of four duck genera endemic to South America: Brazilian teal Amazonetta brasiliensis, spectacled duck Speculanas specularis, crested duck Lophonetta specularioides, and four species of steamer ducks Tachyerespatachonicus, T. leucocephalus, T. pteneres, T. brachypterus. Genetic divergence within and among species was compared using population‐level sampling of the mitochondrial DNA (mtDNA) control region, supplemented with three additional mtDNA genes and six independent nuclear loci from one individual of each species and a variety of outgroup taxa. The monophyly of these four morphologically divergent South American genera was strongly supported. Within this clade, Amazonetta and Speculanas were supported as sister species in all analyses, but different gene regions yielded conflicting or ambiguous results for Lophonetta and Tachyeres. This lack of resolution resulted from little informative variation in nuclear loci and high levels of homoplasy in the mtDNA control region. Control region sequences from the four Tachyeres species fell into two distinct clades. In one clade, T. patachonicus and T. leucocephalus share a set of closely related haplotypes (≤0.6% sequence divergence); while no identical haplotypes were shared between species, the control region phylogeny was insufficiently resolved to either support or reject reciprocal monophyly. The second clade, ~1.7% divergent from the first, comprised haplotypes of the Falkland Islands species T. brachypterus and a captive individual of T. pteneres. These distinctive South American ducks likely experienced two bouts of rapid diversification, thus making analysis of their phylogenetic relationships difficult. Incomplete lineage sorting, founder effects, and perhaps introgression likely have contributed to obscuring the relationships among steamer ducks.     

Temperature does not dictate the wintering distributions of European dabbling duck species

To predict future changes in wintering dabbling duck (Anas sp.) distributions in response to climate change, it is necessary to understand their response to temperature at a continental scale. Food accessibility, competition and thermoregulatory costs are likely to play a major role in determining the wintering distribution of short‐ to medium‐distance migratory bird species and in determining how this distribution varies between years. As avian thermoregulatory costs scale allometrically with body size, it would be expected that the mean mid‐winter temperature experienced by six species of dabbling ducks wintering in Western Europe would be negatively correlated with body mass. We found no clear evidence for such a relationship in a large‐scale analysis, nor were there relationships between weighted mean latitude and longitude and mean January temperature experienced by each species. These results suggest that temperature is less important in shaping mid‐winter duck distributions than factors such as feeding ecology.     

AFLP analysis of genetic diversity and relationship among some Chinese domestic ducks and wild ducks

The amplified fragment length polymorphic (AFLP) technique was used to analyze the genome DNA polymorphism among 8 breeds of domestic ducks and 2 species of wild ducks. Nine of the 17 selected primers pairs gave reproducible polymorphic DNA amplification bands. The amplified bands ranged from 44 to 83 per primer pair. Of the 513 AFLP markers obtained, 498 were polymorphic. The proportion of polymorphic loci was 97.1%. The genetic distance (D) and similarity coefficients (GS) were calculated based on the polymorphic data. Between domestic ducks D ranged from 0.331 to 0.589, while between domestic ducks and the wild ducks, it ranged from 0.298 to 0.520 (vs. Anas Platyrhynchos) and from 0.316 to 0.522 (vs. A. Poecilorhyncha), respectively. The variance analysis showed no significant difference between the two groups of data, which indicated that both mallard and spot-billed ducks made contributions to domestic duck evolution. A dendrogram was constructed according to the D value. __________ Translated from Journal of Xiamen University (Natural Science), 2005, 44(5): 729–733 [译自: 厦门大学学报 (自然科学版), 2005, 44(5): 729–733]     

Population Genetics of a Translocated Population of Mottled Ducks and Allies

Translocating species is an important management tool to establish or expand the range of species. Success of translocations requires an understanding of potential consequences, including whether a sufficient number of individuals were used to minimize founder effects and if interspecific hybridization poses a threat. We provide an updated and comprehensive genetic assessment of a 1970s–1980s translocation and now established mottled duck (Anas fulvigula) population in South Carolina, USA. In addition to examining the population genetics of these mottled ducks, we simulated expected genetic assignments for generational hybrids (F1–F10), permitting formal purity assignment across samples to identify true hybrids and establish hybridization rates. In addition to wild mallards (A. platyrhynchos), we tested for presence of hybrids with migrant American black ducks (A. rubripes) and released domestic game-farm mallards (A. p. domesticus). We used wild reference populations of North American mallard-like ducks and sampled game-farm mallards from 2 sites in South Carolina that could potentially interbreed with mottled ducks. Despite 2 different subspecies of mottled duck (Florida [A. f. fulvigula] and the Western Gulf Coast [A. f. maculatlus]) used in original translocations, we determined the gene pool of the Western Gulf Coast mottled duck was overwhelmingly represented in South Carolina's current population. We found no evidence of founder effects or inbreeding and concluded the original translocation of 1,285 mottled ducks was sufficient to maintain current genetic diversity. We identified 7 hybrids, including an F1 and 3 late-staged (i.e., F2–F3 backcrosses) mottled duck × black duck hybrids, 1 F2-mottled duck backcrossed with a wild mallard, and 2 F3-mottled ducks introgressed with game-farm mallard. We estimated a 15% hybridization rate in our mottled duck dataset; however, the general lack of F1 and intermediate hybrids were inconsistent with scenarios of high hybridization rates or presence of a hybrid swarm. Instead, our results suggested a scenario of infrequent interspecific hybridization between South Carolina's mottled ducks and congeners. We concluded that South Carolina's mottled duck population is sufficiently large now to absorb current hybridization rates because 85% of sampled mottled ducks were pure. These results demonstrate the importance in managing and maintaining large parental populations to counter hybridization. As such, future population management of mottled ducks in South Carolina will benefit from increased geographical and continued sampling to monitor hybridization rates with closely related congeners. We also suggest that any future translocations of mottled ducks to coastal South Carolina should originate from the Western Gulf Coast. © 2021 The Wildlife Society.     

Inheritance patterns of enzymes and serum proteins of mallard-black duck hybrids

From 1974 to 1976, a breeding program was used to produce hybrids of black ducks and mallards for the evaluation of inheritance patterns of serum proteins and serum, liver and muscle enzymes. In addition to the crosses designed to produce hybrids, a series of matings in 1975 and 1976 were designed to evaluate inheritance patterns of a hybrid with either a black duck or mallard. At the F₁ level, hybrids were easily distinguished using serum proteins. However, once a hybrid was crossed back to either a mallard or black duck, only 12–23% of the progeny were distinguishable from black ducks or mallards using serum proteins and 23–39% using esterases. Muscle, serum and liver enzymes were similar between the two species.     

Origin and domestication history of Peking ducks deltermined through microsatellite and mitochondrial marker analysis

In order to elucidate the domestication history of Peking ducks, 190 blood samples from six Chinese indigenous duck breeds were collected with186 individualsgenotyped by 15 microsatellite markers. Both the F_ST and Nei’s standard genetic distances (D_s) from the microsatellite data indicated high genetic differentiation between Peking duck and other Chinese indigenous breeds. The haplotype network with mtDNA data showed that most of the Peking duck haplotypes were distinctly different from those of other domestic breeds. Although the H01 haplotype was shared by all domesticated duck breeds, Peking ducks displayed 12 specific domestic duck haplotypes, including four similar haplotypes H02, H04, H08 and H22, that formed a single haplogroup (A). Both H02 and H22 haplotypes were also shared by mallard and Peking ducks, indicating that Peking ducks originated from wild mallard ducks.