环境DNA技术在贻贝入侵监测中的应用挑战

沼蛤(Limnoperna fortunei)和斑马贻贝(Dreissena polymorpha)是淡水系统中常见的入侵贻贝物种,对其种群规模的持续监测是入侵贻贝防治管控中的关键环节。随着分子生物学技术的发展,入侵物种监测中逐渐尝试利用环境DNA(eDNA)技术实现快速、灵敏检测。然而,在入侵物种引入-定植-扩散过程的监测中,eDNA技术的灵敏度及定量效果受到诸多因素的影响,给实际应用带来挑战。系统梳理了国内外学者利用eDNA技术监测沼蛤、斑马贻贝等入侵物种的研究进展;分析了eDNA技术的采样方案、引物设计、定量分析、质量保证、原位便携仪器设计等影响监测效率与准确率的关键环节;进一步探讨了eDNA技术在贻贝入侵监测中的优势和局限性,以及未来的改进方向。     

基于环境DNA宏条形码技术的北京地区鱼类多样性调查和外来鱼种入侵风险评估

[目的]调查北京地区鱼类多样性和群落分布及评估外来鱼种的入侵风险.[方法]选取北京地区水库、湖泊和河流3种水体类型共33个采样点,于2020年6月10—17日开展水生态监测,利用环境DNA宏条形码技术对各样点的鱼类多样性和群落结构进行监测和分析,对目前北京地区水生态系统中本地鱼种和外来鱼种进行分类汇总,并评估典型外来入...     

广西内陆水域外来鱼类入侵风险分析

【目的】对广西内陆水域的外来鱼类进行入侵风险评估和适生区预测,为广西外来鱼类入侵防治及水生态环境保护提供科学依据。【方法】采用鱼类入侵风险和水生生物入侵能力筛查系统2个体系筛选广西内陆水域具有入侵风险的鱼类,并用最大熵模型预测高入侵风险鱼类在广西内陆水域的潜在适生区。【结果】广西内陆水域共记录有外来鱼类18种,其中13种鱼类具有高入侵风险,分别为尖齿胡鲇、尼罗罗非鱼、莫桑比克罗非鱼、奥利亚罗非鱼、豹纹脂身鲇、齐氏罗非鱼、大口黑鲈、斑点叉尾鮰、短盖肥脂鲤、露斯塔野鲮、条纹鲮脂鲤、麦瑞加拉鲮和食蚊鱼,2种具有中入侵风险,为丁鱥和太湖新银鱼。适生区预测结果表明,极易发生鱼类入侵的水域为黔江、郁江和南流江。【结论】对中、高入侵风险的鱼类均需重点监控且在具有高入侵风险水域应对外来鱼类开展持续性监测,并进行早期筛查。     

白花鬼针草入侵对植物群落结构及物种多样性的影响

【目的】阐明白花鬼针草入侵对植物群落组成及物种多样性的影响。【方法】调查广东茂名有白花鬼针草入侵(试验样方)和无白花鬼针草生长(对照样方)的植物群落中植物的种类、盖度、高度和密度,计算不同植物重要值及物种多样性指数,通过皮尔逊相关系数及拟合曲线展现白花鬼针草种群特征与其重要值及物种多样性的关系。【结果】白花鬼针草入侵后植物群落的组成和结构显著改变,由对照样方的104种减少到试验样方的63种,双穗雀稗、白花蛇舌草、香膏萼距花等物种消失,胜红蓟、阔叶丰花草、假臭草等恶性杂草的重要值降低,而马唐、薇甘菊、空心莲子草等物种重要值升高。白花鬼针草入侵降低了物种多样性,试验样方的Patrick丰富度指数(R)、Simpson多样性指数(D)和Shannon-Wiener多样性指数(H)均低于对照样方;白花鬼针草的重要值与以上多样性指数(H、D)和丰富度指数(R)呈显著负相关(P<0.001)。【结论】白花鬼针草入侵减少了物种多样性,并形成单一优势种群群落,对植物群落产生了负效应,对生态环境造成了极大的威胁。     

长江口九段沙湿地大型底栖动物群落结构的季节变化规律

2004年11月至2005年10月,调查了长江口九段沙湿地大型底栖动物群落特征的季节变化及其土壤因子影响,共调查到大型底栖动物30种,主要由甲壳动物、环节动物、软体动物及昆虫幼体组成,光滑狭口螺(Stenothyra glabra)、堇拟沼螺(Assiminea violacea)、焦河蓝蛤 (Potamocorbula ustulata)、中国绿螂 (Glaucomya chinensis)和谭氏泥蟹(Ilyrplax deschampsi)为优势种,且生物密度四季变化明显.春季大型底栖动物生物密度和生物量处于最高水平,多样性指数最高.夏季密度和生物量最低,物种多样性也较低,分布较不均匀.秋、冬季生物种类数与生物量差异不显著,生物密度冬季较秋季高.春、夏、秋季底栖动物种类数、密度和生物量均未与土壤因子达到显著相关水平.冬季土壤湿度与有机质含量与底栖动物密度显著相关.     

内蒙古淡水昆虫物种多样性初步调查（英文）

【目的】探讨内蒙古水生昆虫的物种多样性,积累基本数据,为将其应用于水质监测奠定理论基础,并为加强保护淡水昆虫资源提供依据。【方法】采用综合定性采样法进行采集,水质评价采用科级生物指数(FBI)、EPT物种丰富度、Shannon-Wiener生物多样性指数。【结果】在52个采集点获取水生昆虫共计7目59科187种。研究发现1新种,1中国新纪录属,2中国新纪录种,2内蒙古新纪录科,3新纪录属,25新纪录种,另有待鉴种56个。7目昆虫的多样性分析结果显示,毛翅目和蜉蝣目的物种多样性较高,而襀翅目物种多样性明显较低;毛翅目和蜉蝣目的科数和个体数占总类群的42.37%和84.29%,这2个目均属优势类群。物种多样性较高的地区主要集中在内蒙古东部,包括呼伦贝尔市、兴安盟、通辽市、赤峰市。通过科级生物指数、EPT丰富度和ShannonWiener生物多样性指数的水质评价比较结果显示,前两者的评估结果相近,且明显不同于ShannonWiener生物多样性指数。【结论】内蒙古地区毛翅目和蜉蝣目昆虫耐污值较低的种类比较丰富,因此,这两类昆虫更适合指示该地区的水质状况。     

乐清湾贝类群落组成及其粒径谱结构特征

为了解乐清湾贝类资源情况及群落稳定性特征,基于2016—2017年乐清湾定点调查数据,分析了不同季节乐清湾贝类组成、优势种、资源密度、以及物种多样性,并首次建立乐清湾海域贝类生物量粒径谱与标准化生物量粒径谱。结果显示：1)本次共采集到贝类共计45种,隶属于12目,25科,31属。焦河蓝蛤(Potamocorbula ustulata)为乐清湾绝对优势种;2)资源密度表现为夏季最高,其次为春季,秋季与冬季次之;4个季节的丰富度指数(D)、多样性指数(H′)和均匀度指数(J′)平均为3.26、1.61、0.45,3种多样性指数均处于较低水平;3)ABC曲线显示乐清湾贝类的生物群落处于中度干扰状态;4)乐清湾生物量粒径谱谱型复杂,优势种控制着生物量粒径谱的峰值,且与我国其他海域的结果也存在差异;5)标准化生物量粒径谱的斜率范围为-1.5539—-0.7373,在我国近海海域中属于偏低水平,表明营养循环水平较低。截距范围在16.673—21.597,高于我国其他海域,说明乐清湾贝类生产力水平较高。     

巢湖富营养化对河蚬和环棱螺分布及种群密度影响

2001年9月和2002年9月两次对巢湖河蚬和环棱螺的调查表明,在富营养化程度较重的西湖区,河蚬生物量分别为17.87和47.29g·m^-2;环棱螺生物量分别为4.4和12.6g·m^-2.而在富营养化程度较轻的东湖区,河蚬的生物量分别为67.86和96.18g·m^-2;环棱螺的生物量分别为32.00和31.21g·m^-2.河蚬和环棱螺的种群密度和生物量均随水体富营养化的加剧而下降.近岸带河蚬和环棱螺的密度和生物量明显高于敞水区.河蚬的分布型为核心型,而环棱螺更接近随机性分布.河蚬和环棱螺的种群密度和生物量与水深均无明显相关(P＞0.05).环棱螺生物量与总氮TN、硝态氮NO₃-N、总磷TP和溶解性磷PO₄-P浓度呈显著负相关,而河蚬生物量仅与PO₄-P呈负相关.现有河蚬资源量与1981年相比有较大幅度的下降.探讨了其它环境因子对河蚬和环棱螺分布和生长的影响.     

雅鲁藏布江上游高寒草甸地上生物量与多样性沿海拔梯度的变化特征

【目的】雅鲁藏布江是青藏高原最重要的河流,研究雅鲁藏布江的地上生物量和物种多样性对了解该区域的草地资源和生态保护具有重要意义。【方法】文章根据海拔梯度对雅鲁藏布江上游高寒草甸植被特征进行调查,研究不同海拔梯度下地上生物量和物种多样性的分布差异、地上生物量与物种多样性之间的关系,以及相关环境因子对地上生物量和物种多样性的影响。【结果】(1)海拔与地上生物量无显著关系;(2)海拔与多样性指数呈显著负相关关系,随海拔升高Shannon-Weiner指数、Patrick指数表现为下降趋势;(3)地上生物量与多样性之间表现为负相关关系,Shannon-Weiner指数对地上生物量的解释达到70%(P＜0.01);(4)物种多样性与温度和降水呈显著正相关关系(P＜0.05),物种多样性与海拔呈负相关关系(P＜0.05),地上生物量与海拔、温度和降水无显著关系(P＞0.05)。【结论】该研究结果有助于为雅鲁藏布江上游流域草地资源的合理利用和物种多样性保护提供依据。     

不同景观结构下麦田地面甲虫和蜘蛛物种多样性及优势种分布的时空动态

【目的】揭示在不同景观结构下,麦田地面甲虫和蜘蛛物种多样性及优势种分布的时空动态,为实际小麦生产过程和害虫种群控制提供理论上的依据和方法。【方法】采用地面陷阱法调查,对不同景观结构下地表甲虫和蜘蛛物种多样性的田间分布和时间动态进行分析与模拟。【结果】所得银川平原4种不同景观结构下麦田生境中地表甲虫和蜘蛛17科,92种,计5 683头。蜘蛛和步甲分别占总个体数的15.61%、31.15%。对不同景观结构下地表甲虫和蜘蛛物种多样性的田间分布和时间动态进行分析与模拟,得出:复杂景观结构较简单景观结构的调查区,表现出明显较高的物种多样性。步甲在5月上旬多样性指数最大,随后出现先降后升的趋势;蜘蛛在6月下旬多样性指数最大,之后一直呈现下降趋势。其原因主要是灌水影响了部分地表甲虫和蜘蛛活动所致。【结论】通过绘制了毛青步甲Chlaenius pallipes和星豹蛛Pardosa astrigera种群密度的田间分布图,可看出复杂景观结构调查区较简单景观结构调查区二者种群数量明显较高。     

Nystatin and killer toxin sensitivity of free and immobilizedSaccharomyces cerevisiae

The inhibitory effect of nystatin and killer toxin on the growth of free and covalently-immobilizedSaccharomyces cerevisiae cells was studied. The resistance of immobilized cells to both agents was accompanied by increased amounts of phospholipids and sterols. The possible relationship between these changes in the membrane composition and the transduction of a signal across the cytoplasmic membrane is discussed.     

Y-chromosome Data and Tribal Affiliations of Allenopithecus and Miopithecus

The phylogeny of Old World monkeys has remained unresolved in part because of a lack of resolution in the Cercopithecinae. Competing morphological hypotheses have had Allen's swamp monkey (Allenopithecus nigroviridis) and the talapoins (Miopithecus spp.) as basal branches of either the tribe Cercopithecini or the tribe Papionini. Previous molecular analyses have not adequately addressed the issue. To better understand the evolutionary history of these primates, we sequenced and subjected to phylogenetic analysis 3.1 kb of 2 loci (TSPY and SRY) from the non-recombining portion of the Y-chromosome. Individuals from the genera Allenopithecus, Miopithecus, Erythrocebus, Chlorocebus, and Cercopithecus were surveyed and their sequences compared with those previously published for the Papionini and Colobinae. The results suggest Allenopithecus and Miopithecus are more closely related to the Cercopithecini than Papionini. Our data also support the hypothesis that within the Cercopithecini, Erythrocebus and Chlorocebus share a close evolutionary relationship, distinct from the other members of the tribe.     

The hernandez and fernandez genes of Drosophila specify eye and antenna

The formation of different structures in Drosophila depends on the combined activities of selector genes and signaling pathways. For instance, the antenna requires the selector gene homothorax, which distinguishes between the leg and the antenna and can specify distal antenna if expressed ectopically. Similarly, the eye is formed by a group of "eye-specifying" genes, among them eyeless, which can direct eye development ectopically. We report here the characterization of the hernandez and fernandez genes, expressed in the antennal and eye primordia of the eye-antenna imaginal disc. The predicted proteins encoded by these two genes have 27% common amino acids and include a Pipsqueak domain. Reduced expression of either hernandez or fernandez mildly affects antenna and eye development, while the inactivation of both genes partially transforms distal antenna into leg. Ectopic expression of either of the two genes results in two different phenotypes: it can form distal antenna, activating genes like homothorax, spineless, and spalt, and it can promote eye development and activates eyeless. Reciprocally, eyeless can induce hernandez and fernandez expression, and homothorax and spineless can activate both hernandez and fernandez when ectopically expressed. The formation of eye by these genes seems to require Notch signaling, since the induction of ectopic eyes and the activation of eyeless by the hernandez gene are suppressed when the Notch function is compromised. Our results show that the hernandez and fernandez genes are required for antennal and eye development and are also able to specify eye or antenna ectopically.     

Development and function of Pisolithus and Scleroderma ectomycorrhizas formed in vivo with Allocasuarina,Casuarina and Eucalyptus

The effect of inoculating seedlings of Eucalyptus grandis, Allocasuarina littoralis and Casuarina equisetifolia with two isolates of Pisolithus and two isolates of Scleroderma from under eucalypts was examined in a glasshouse trial. Ectomycorrhizas formed extensively on Eucalyptus (23–46% fine roots ectomycorrhizal) and Allocasuarina (18–51% fine roots ectomycorrhizal). On Casuarina, the fungi were either unable to colonize the rhizosphere (one isolate of Pisolithus), or sheathed roots, resembling ectomycorrhizas, formed on 1–2% of the fine roots. Colonization of roots by one isolate of Scleroderma resulted in the death of Casuarina seedlings. Inoculation with fungi increased shoot dry weight by up to a factor of 32 (Eucalyptus), 4 (Allocasuarina) and 3 (Casuarina). Ectomycorrhizas formed in associations with Eucalyptus and Allocasuarina had fully differentiated mantles and Hartig nets in which the host and fungal cells were linked by an extensive fibrillar matrix. Sheathed roots in Casuarina lacked a Hartig net, and the epidermis showed a hypersensitive reaction resulting in wall thickening and cell death. The sheaths are described as mantles since the density and arrangement of the hyphae in the sheaths was similar to that in mantles of the eucalypt ectomycorrhizas. The intercellular carbohydrate matrix was not produced in the Casuarina mantle in association with Pisolithus, hence the mantle was not cemented to the root. These structures differ from poorly compatible associations described previously for Pisolithus and Eucalyptus. The anatomical data indicate that ectomycorrhizal assessment based on surface morphological features may be misleading in ecological studies because compatible and incompatible associations may not be distinguishable.     

Ovule and seed anatomy ofCistaceae and relatedMalvanae

Ovule and especially seed anatomy of eight species ofCochlospermaceae, Bixaceae, Cistaceae, Monotoideae, Pakaraimaeoideae (two subfamilies ofDipterocarpaceae), andSarcolaenaceae were investigated. All representatives show a bixoid chalazal region in the seed as probable exclusive synapomorphy among angiosperms. The palisade layer of the exotegmen is curved inwards at its proximal end and forms a dome-shaped structure. A plug of hypostase tissue with an annulus/core structure fits into this dome. Moreover, two additional tissue types in the hypostase can be found in some representatives of the group. These and other micromorphological, wood anatomical, and floral morphological characters, indicate that the taxa form a monophyletic group close toMalvales s. str. The form of the starch grains in the endosperm is compared and is described for the first time forPakaraimaea (Dipterocarpaceae) andLeptolaena (Sarcolaenaceae). The position ofDiegodendron close toBixa and the presumably more distant positions ofMuntingia andNeuradaceae are discussed.     

Molecular identification and differentiation of Brevibacterium species and strains

Amplified ribosomal DNA restriction enzyme analysis (ARDRA), pulsed field gel electrophoresis (PFGE) and ribotyping were used to differentiate among 24 strains of Brevibacterium linens, Brevibacterium casei and Brevibacterium epidermidis obtained from type culture collections or isolated from various smear ripened cheeses. ARDRA was applied to the 16S rDNA. B. linens was shown to be a quite heterogenic group with 2 to at least 4 copies of rrn operons per strain with aberrant nucleotide sequences. AccI gave genus specific restriction patterns and was used to separate Brevibacterium from Corynebacterium species. The expected species specificity of TaqI applied to B. linens type culture strains, but not to all strains isolated from cheese. By AvaI restriction, B. casei and B. linens were differentiated from B. epidermidis and the orange pigmented Arthrobacter casei, a new species of coryneform bacteria; by XmnI restriction, B. linens and B. epidermidis were differentiated from B. casei. One of 4 B. linens genotypes could not be distinguished from B. casei by this method. Here, the typical orange B. linens pigments were used for classification, which was confirmed by partial sequencing of the 16S rDNA.     

Amino acids and sugars in nectar,and their putative evolutionary significance

Individual amino acids and sugars from flower nectar of 32 plant species with different pollination systems were quantified and compared. Data show that there is no correlation between sugar and amino acid concentration. Furthermore there is no correlation between composition and concentration of amino acids and evolutionary advancement, nor any direct relation with pollination systems. However, higher sugar concentrations are often linked with more advanced morphological characters. Nectars from pierced or damaged flowers or nectars contaminated with pollen exhibit modifications and increases in amino acid composition. The presence of proline probably indicates such pollen contamination. Most pollinating animals depend on flower nectar in their energetic requirements, yet innumerable alternative amino acid and protein sources exist. Future research has to consider the relationship between nutritional requirements of pollinating animals and dependence on flower nectars.Dedicated to Prof. Dr.L. van der Pijl, Den Haag, in honour of his 80th birthday.     

Cyclooxygenase inhibitory and antioxidant cyanidin glycosides in cherries and berries

Anthocyanins from tart cherries, Prunus cerasus L. (Rosaceae) cv. Balaton and Montmorency; sweet cherries, Prunus avium L. (Rosaceae); bilberries, Vaccinum myrtillus L. (Ericaceae); blackberries, Rubus sp. (Rosaceae); blueberries var. Jersey, Vaccinium corymbosum L. (Ericaceae); cranberries var. Early Black, Vaccinium macrocarpon Ait. (Ericaceae); elderberries, Sambucus canadensis (Caprifoliaceae); raspberries, Rubus idaeus (Rosaceae); and strawberries var. Honeoye, Fragaria x ananassa Duch. (Rosaceae), were investigated for cyclooxygenase inhibitory and antioxidant activities. The presence and levels of cyanidin-3-glucosylrutinoside 1 and cyanidin-3-rutinoside 2 were determined in the fruits using HPLC. The antioxidant activity of anthocyanins from cherries was comparable to the commercial antioxidants, tert-butylhydroquinone, butylated hydroxytoluene and butylated hydroxyanisole, and superior to vitamin E, at a test concentration of 125 microg/ml. Anthocyanins from raspberries and sweet cherries demonstrated 45% and 47% cyclooxygenase-I and cyclooxygenase-II inhibitory activities, respectively, when assayed at 125 microg/ml. The cyclooxygenase inhibitory activities of anthocyanins from these fruits were comparable to those of ibuprofen and naproxen at 10 microM concentrations. Anthocyanins 1 and 2 are present in both cherries and raspberry. The yields of pure anthocyanins 1 and 2 in 100 g Balaton and Montmorency tart cherries, sweet cherries and raspberries were 21, 16.5; 11, 5; 4.95, 21; and 4.65, 13.5 mg, respectively. Fresh blackberries and strawberries contained only anthocyanin 2 in yields of 24 and 22.5 mg/100 g, respectively. Anthocyanins 1 and 2 were not found in bilberries, blueberries, cranberries or elderberries.     

Pericarp structure and phylogeny of theLamiaceae-Verbenaceae-complex

Pericarp structure was investigated in 158 species of the familiesLamiaceae andVerbenaceae. Data from 221 out of 262 genera ofLamiaceae s.l. and a few ofVerbenaceae s.str. were collected in a table. A cladistic analysis was performed on the basis of pericarp characters only. The abandonment of subfam.Pogostemonoideae as a taxonomic unit is considered. Examples of groups given additional support by similarities in pericarp characters are: (1) the gynobasic-styled labiates (subfamiliesPogostemonoideae, Lamioideae, Nepetoideae); (2) aLamioideae-Pogostemonoideae-group; (3)Nepetoideae; (4) aWestringia-Hemigenia-Hemiandra-Microcorys group (in subfam.Chloranthoideae); (5) aLepechinia-Chaunostoma-group (inNepetoideae); (6) aPrunella-Cleonia-group (inNepetoideae).