在线生物监测技术及其应用研究

同化学分析或化学传感器相比,在线生物监测技术具有灵敏度高、费用低、能够综合反映水质变化等优点。对目前国际上几种在线生物监测技术进行了分析,列举了该技术在不同领域的应用,表明该技术对重大水质污染事件等的早期预警具有不可替代的优点,也可作为化学品安全性评价中生物毒性研究的重要手段。     

生物炭影响作物生长及其与化肥混施的增效机制研究进展

利用秸秆型生物炭进行还田改土不仅具有提升作物产量的潜力,而且能够产生明显的环境效益,现已成为当今国内外农业领域的研究热点.本文综述了近年来国内外有关生物炭添加影响作物生长的分子调控机制研究,尤其关注了生物炭与作物根系的互作效应;介绍了生物炭与化肥混施的生物学效应及可能的增效机制;展望了今后的研究方向,以期促进我国相关领域的研究.国内外的最新研究表明:生物炭土壤添加改善植物生长的关键是生长素相关信号转导分子,通过促进植物细胞扩增、细胞壁松弛、水及营养的转运等相关基因的表达,有利于植物的新陈代谢及生长.生物炭及其与根系的相互作用能够直接或间接地影响土壤物理、化学、生物因子,从而在炭、肥互作增效过程中起主导调控作用.     

环境DNA宏条形码在生物多样性研究与监测中的应用

环境DNA宏条形码(eDNA metabarcoding)技术通过提取水体、土壤、空气中的环境DNA,使用引物PCR扩增与高通量测序,进行物种鉴定与生物多样性评估.作为一种新的监测技术,相比于传统监测技术更加快捷、准确以及对自然环境的破坏小,因此在一定程度上改变了我们调查地球生物多样性的方式.本文综述了环境DNA宏条形...     

我国工业生物过程工程研究进展

工业生物技术的进步离不开工业生物过程工程研究的不断深入及发展,我国作为工业发酵大国在工业生物技术由实验室向产业化转化过程中面对诸多挑战,由此而逐渐发展起来的我国工业生物过程工程发展先后经历了多个阶段,伴随着不同阶段的发展,我国的工业生物技术水平得到不断的提升。本文重点回顾了近三、四十年来我国工业生物过程工程发展的历程,包括早期由化工过程研究引入的动力学模型化研究、基于过程控制的优化理论与方法的应用、基于过程在线监测技术发展起来的参数相关性分析方法、过程多尺度理论的建立、基于现代固态发酵的新型固态发酵罐的设计及优化技术发展等。通过对生物过程工程发展历程的回顾对先进工业生物过程发展面临的技术难题及由此引出的未来发展重点方向进行了探讨。     

污染土壤的生物标记物研究进展

生物标记物是指示环境中污染物危害效应的生物信号。利用生物标记物进行污染土壤的检测和定量分析是最可行的方法之一。本文主要综述了近年来一些典型的、指示土壤污染的几类生物标记物 (如细胞色素P4 5 0加氧酶系统、细胞抗氧化酶及DNA指纹技术 )的最新研究进展 ,并探讨了生物标记物在污染土壤修复效果评价及其早期诊断方面的应用前景。     

生物与环境

“生物与环境”一章的教材内容主要阐述生态学研究的对象、水平、任务及意义．是从宏观的角度阐明生物圈是人类和其他生物共同拥有的美好家园．研究生物圈中生物与生物之间、生物与无机环境之间的相互作用,维护生物圈相对稳定性对人类自身的生存和发展具有重要意义。本章知识内容的复习应把握下列知识要点：     

土壤原生生物多样性及其生态功能研究进展

原生生物广泛分布在土壤和不同生境中, 其数量庞大、种类繁多, 在生态系统物质循环和能量流动以及维持土壤和植物健康中起着举足轻重的作用。与土壤其他生物类群相比, 原生生物分类体系和生态类型复杂, 分类鉴定困难且分子检测技术不够成熟, 目前对原生生物的认识相对不足。本文对当前原生生物的相关研究进展进行了总结和梳理, 系统阐述了原生生物的分类系统和营养功能群特征、土壤原生生物的多样性分布特征及影响因子, 重点介绍了原生生物群落在参与土壤养分循环、维持土壤和植物健康等中的功能作用, 并对未来的研究方向与应用前景进行了展望。对土壤原生生物的研究有助于我们深入认识土壤生物多样性资源, 并进行保护性地开发和利用, 维护土壤和生态系统健康。     

基于文献计量的细菌-生物炭协同修复重金属污染土壤研究进展

为提高重金属污染土壤可持续修复效能,研究生物炭与细菌对重金属污染土壤的协同修复作用。基于文献计量学分析及重金属污染土壤修复背景,总结了细菌与生物炭对土壤重金属的稳定化特征及菌炭间的相互作用,分析了单一生物炭或细菌对重金属污染土壤修复的局限性,强调了细菌-生物炭协同修复技术的优势,阐述了细菌与生物炭主要通过离子交换、固定作用、氧化还原作用和迁移作用等重要机制有效修复重金属污染土壤,揭示了细菌-生物炭协同作用在重金属污染土壤修复中的巨大应用价值。文献计量学研究表明,生物炭与细菌对重金属污染土壤的协同修复已得到广泛关注。目前认为:生物炭与细菌的协同作用可有效改良土壤理化性质及提高土壤修复效率,也可促进植物生长及植物修复进程;生物炭对细菌影响具有双重性质,可促进细菌生长,也可能对细菌产生毒害;细菌可改变生物炭的理化性质,进而强化生物炭的重金属固定性能;细菌协同生物炭联合修复重金属污染土壤过程中,生物炭主导吸附和固定,细菌则发挥活化和解毒等功能;优化细菌-生物炭组合形式,发展混合细菌与多种类生物炭协同技术,是复合重金属污染土壤可持续修复亟待解决的重要问题;进一步揭示细菌与生物炭对重金属污染土壤的耦合作用及长效作用机制,规避生物炭生产和应用中的潜在生态健康风险,研发新型高效能细菌与生物炭复合体是细菌协同生物炭可持续修复重金属污染土壤应用领域面临的挑战。     

生物土壤结皮对荒漠土壤线虫群落的影响

在干旱的沙漠生态系统中,生物土壤结皮对于沙丘的固定和土壤生物的维持起着相当重要的作用.土壤线虫能敏感的指示土壤的恢复程度,是衡量沙区生态恢复与健康的重要生物学属性,而目前关于生物土壤结皮与土壤线虫的关系研究很少.为探明生物土壤结皮对土壤线虫的影响,以腾格里沙漠东南缘的人工植被固沙区藻结皮和藓类结皮覆盖的沙丘土壤为研究对象,根据固沙年限的不同将样地分为4个不同的区进行采样(1956、1964、1981和1991年固沙区),以流沙区作为对照;同时,在不同季度(4、7、9和12月)分别采集腾格里沙漠东南缘的人工植被固沙区藻结皮和藓类结皮覆盖下不同土层(0-10、10-20和20-30 cm)的沙丘土壤,以沙坡头地区的红卫天然植被区为对照,分析生物土壤结皮下土壤线虫的时空变化.采用改良的Baermann漏斗法进行分离线虫,用光学显微镜鉴定并统计.研究表明:1956、1964、1981和1991年人工植被固沙区的藻结皮和藓类结皮均可显著提高其下土壤线虫多度、属的丰富度、Shannon-Weaver多样性指数、富集指数和结构指数(P＜0.05),这可能是因为生物土壤结皮的存在为土壤线虫提供了重要的食物来源和适宜的生存环境;固沙年限与结皮下土壤线虫多度、属的丰富度、Shannon-Weaver多样性指数、富集指数和结构指数存在显著的正相关关系(P＜0.05),这说明固沙年限越久,越有利于土壤线虫的生存和繁衍;结皮类型显著影响土壤线虫群落,相对于藻结皮而言,藓类结皮下土壤线虫多度与属的丰富度更高(P＜0.05),这说明演替后期的藓类结皮比演替早期的藻结皮更有利于土壤线虫的生存和繁衍.此外,藻结皮和藓类结皮均可显著增加其下0-10、10-20和20-30 cm土层线虫多度和属的丰富度(P＜0.05),但随着土壤深度的增加,这种影响逐渐减弱,表明生物土壤结皮更有利于表层土壤线虫的生存;而且,随着季节的变化,藻结皮和藓类结皮下土壤线虫多度基本表现为秋季＞夏季＞春季＞冬季,这些反映了生物土壤结皮的生物量、盖度和种类组成随着季节变化而变化.因此,腾格里沙漠东南缘的人工植被固沙区生物土壤结皮的存在与演替有利于土壤线虫的生存和繁衍,增加了线虫数量、种类和多样性,这指示了生物土壤结皮有利于该区土壤及其相应生态系统的恢复.     

土壤原生动物对环境污染的生物指示作用

土壤原生动物具有丰富的种类和巨大的生物量,在土壤生态系统中具有十分重要的地位．作为指示生物,土壤原生动物具有与其他土壤动物相比更独特的优势．研究它们的群落结构、数量及多样性动态变化,可以很好地评价和监测自然环境变化及人类活动带来的环境污染．本文根据国内外相关文献,简要概述了土壤原生动物在生态系统中的作用．对原生动物的生物指示物优势、土壤原生动物对环境因子响应和污染指示作用及对大气CO2浓度变化的响应等进行了论述,并对土壤原生动物在生态毒理诊断中的应用前景进行了展望．     

Impact of technogenic pollution of urban environment on vitality indicators of urban biota (Mollusk fauna,soil mesofauna,epiphytic lichens)

Abstract—The article presents results of ecological, chemical, and bioindication assessment of the urban ecosystem of an industrial city in the South of Ukraine. The dynamics of physical and chemical parameters of soil, surface water, and air in various functional areas of the city was analyzed. The complex pollution index for environmental components was determined. Bioindicative assessment of the ecological condition of the urban ecosystem was performed based on vitality parameters of epiphytic lichen flora, soil mesofauna, and freshwater mollusk fauna. Based on bioindicators’ vitality, zones with different ecological conditions were demarcated. Toxic effects of various pollutants on living organisms and tolerance of some bioindicator species under anthropogenic pressure were analyzed. It was found that the amount of zoophages increases and homogenization of anamorphoscope composition of major mesopedobionts groups with the dominance of individual species is observed in anthropogenically transformed areas. In alkaline soils of functional areas of the urban ecosystem, prevalence of calcicole species—millipedes, pill bugs, and gastropods—was noted, which allows them to be used as soils’ alkalization level indicators. The degree of correlation between the viability of bioindicator groups and complex pollution index of basic components of the urban environment was determined. For instance, an inverse correlation between the vitality of epiphytic lichen flora (G, %) and the complex atmospheric air environmental contamination index (P_a) (–0.80, p < 0.05); and a direct correlation between the decline in the vitality of soil mesofauna (\(\overline G \), %) and complex soil contamination index (Z_s) (0.84, p < 0.05) were discovered. Therefore, biomorphs of epiphytic lichen flora and some groups of mesopedobionts can be used as pollution indicators for urban environments. Based on the study results, an algorithm for complex ecological, chemical, and bioindication assessment of ecological condition of an urban ecosystem in an industrial city was proposed.     

Evaluating the use of Myotis daubentonii as an ecological indicator in Mediterranean riparian habitats

In recent years, interest and concern regarding biodiversity conservation have grown remarkably not only among conservationists but also amongst a wider public beyond scientific institutions. The monitoring of fauna and flora over long periods of time has been satisfactorily proven to be a viable tool for quantifying how environmental changes affect natural communities. Some bat species are regarded as good bioindicators, mainly due to their longevity and high sensitivity to environmental changes. Myotis daubentonii is one of the species most closely associated with riparian habitats in the north-east Iberian Peninsula, and is used as an ecological indicator in specific monitoring programs such as the Waterway Survey (United Kingdom) and the QuiroRius (Spain). Nonetheless, there is still great controversy as to whether M. daubentonii is a good biological indicator or not. While some authors accept it as a bioindicator, others point to the studies carried out in the U.K., Poland, Switzerland and Germany that show a remarkable increase in the numbers of this bat when pollution increases in canalized rivers, which suggest that it is in fact a generalist species.Due to the lack of information regarding habitat-quality requirements in Daubenton’s bats in the Mediterranean region and the species’ potential as a bioindicator in riparian habitats, we aimed to 1) examine how QuiroRius data match other well-established biological indicators (IBMWP for invertebrates and QBR for riparian forests); 2) analyse how environmental variables at both local and landscape scales affect the presence of M. daubentonii; and 3) describe how environmental traits influence the relative abundance of M. daubentonii.A total of 104 streams below 1000 m a.s.l. were simultaneously sampled using bat, macroinvertebrate and vegetation bioindicators. Despite having similar conservation aims, these three bioindicators did not provide consistent images of overall ecosystem quality and thus a multidisciplinary approach is necessary for a full analysis of the health of these riparian ecosystems. M. daubentonii were found more frequently in wide rivers with well-structured native riparian forests; on the other hand, landscape composition at broader scales and altitude had no influence on bat presence/abundance.Thus, we suggest that QuiroRius could be used as a complementary bioindicator for analysing riparian forest quality but cannot be used alone as a tool for evaluating correctly overall riparian ecosystem health. Both relative abundance and/or presence/absence could be used as bioindicator surrogates given that the effect of microhabitat environmental predictors had similar impact on both these measures.     

重金属污染对鸟类的影响

鸟类属于高等脊椎动物,是食物链中的高级消费者,由于生物富集作用,鸟类容易受到环境中污染物质的影响。鸟类羽毛和卵壳中的重金属浓度可以反映其所处环境中重金属的污染状况,因此可以用鸟类作为指示生物来监测环境中的重金属污染。对重金属污染的来源和特征进行了介绍,阐述了重金属污染对环境安全构成威胁的原因,分析了汞、铅、镉、砷、铜等几种重金属元素在鸟体内富集的特点及其对鸟类的危害。重金属污染物在不同生物体内的浓度存在差异,反映出它们通过食物链的生物富集和放大,对环境和鸟类的毒害作用有所增加。建议选择野生鹭类、麻雀和喜鹊等鸟类作为指示生物监测环境中的重金属污染。     

The use of Cerastoderma glaucum as a sentinel and bioindicator species: Take-home message

Bivalves are frequently used to assess environmental contamination, and are often considered good sentinel and/or bioindicator species. For that reason the bioaccumulation and toxicity induced by metals and As in the cockle Cerastoderma glaucum, collected from areas with different contamination levels along the Óbidos lagoon (Portugal), were used to evaluate the use of this species as sentinel and/or bioindicator. The results showed that areas in the middle of the lagoon presented lower metals and As concentrations, lower total organic matter content and lower percentage of fine particles than areas in the Bom Sucesso arm. In all areas Cr, Pb and Cu were the most abundant elements, while Ni, As, Cd and Hg were less abundant. Results also showed a moderate correlation between total elements concentrations found in C. glaucum and in sediment, and thus caution should be taken when considering this species as a good sentinel species. The present study also revealed that, in general, C. glaucum from areas in the middle of the lagoon accumulated higher concentrations of metals and As (Biota-Sediment Accumulation Factor >1) than cockles from the most polluted areas located in the Bom Sucesso arm. However, in all areas, the majority of metals (Cu, Cr, Pb) were found in cockles insoluble fraction which may explain low cellular damage and reduced oxidative stress responses observed. Therefore, our results may further alert for caution when identifying C. glaucum as a good bioindicator species. Thus, our findings highlight the fact that studies should be cautious when selecting species for environmental monitoring, since good sentinels or bioindicators in highly polluted systems may not act in the same way in low or moderately contaminated areas. Furthermore, our study warns for the misclassification of cockles in different ecosystems.     

步甲作为指示生物的研究进展

步甲是鞘翅目的重要类群之一,几乎分布于所有陆生生境。步甲与环境关系密切,不少学者认为可将其作为指示生物。目前国外关于步甲作为指示生物的研究很多,内容主要集中在探索生态系统的可持续管理和对整体环境质量的评估,而国内关于步甲的研究主要是区系分类和群落多样性研究,很少关于步甲对环境的指示作用报道。因此,深入研究步甲与环境的相互关系,在此基础上进一步研究其指示作用并应用于生态环境监测和评估之中十分重要。文章对近年来国内外关于步甲作为指示生物的相关研究工作进行概括和总结,对步甲作为指示生物的优点、环境因子对步甲的影响、步甲对环境变化的响应等进行简要评述,同时讨论步甲作为指示生物的研究中存在的一些问题以及该研究领域的发展前景。     

A Comprehensive Approach to Speciation of Lead and Its Contamination of Firing Range Soils: A Review

Lead pollution of shooting range soils has received tremendous attention in the past few years due to its adverse effects to the environment. High total Pb concentrations have been reported in shooting range soils. Soil physicochemical properties such as pH, organic matter, cation exchange capacity (CEC) and soil moisture have been found to have a strong influence on the transformation of Pb shots. Therefore, it is imperative that the soil physicochemical properties are well understood when investigating the environmental effects of Pb. Total Pb concentration gives a measure of the amount of Pb stored in soil but does not give a true picture of the environmental pollution risk. In their quest to control pollution of shooting range soils from Pb, scientists have applied soil remedial methods such as soil washing, chemical stabilisation and phytoremediation. This review examines the pollution status of shooting range soils from Pb, the effect of soil properties on Pb mobility and bioavailability, the importance of Pb chemical speciation in understanding Pb mobility and shooting range management strategies applied in the control and management of Pb pollution of shooting range soils. This is a holistic review covering literature from 1983 to 2018, a period of 35 years.     

The selection, testing and application of terrestrial insects as bioindicators

Although the uses and merits of terrestrial insects as indicators have been extensively discussed, there is a lack of clear definition, goal directedness and hypothesis testing in studies in the field. In an attempt to redress some of these issues and outline an approach for further studies, three categories of terrestrial insect indicators, corresponding to differences in their application, are proposed, i.e. environmental, ecological and biodiversity indicators. The procedures in terrestrial insect bioindicator studies should start with a clear definition of the study objectives and proposed use of the bioindicator, as well as with a consideration of the scale at which the study is to be carried out. Bioindication studies are conducted at a variety of spatial and temporal scales within the context of earth-system processes, but the objectives of the study will largely determine the scale at which it would be optimally conducted. There is a tendency for studies to be conducted below their space-time scaling functions, giving them apparent predictability. The selection of potential indicator taxa or groups is then based on a priori suitability criteria, the identification of predictive relationships between the indicator and environmental variables and, most importantly, the development and testing of hypotheses according to the correlative patterns found. Finally, recommendations for the use of the indicator in monitoring should be made. Although advocating rigorous, long-term protocols to identify indicators may presently be questionable in the face of the urgency with which conservation decisions have to be made, this approach is critical if bioindicators are to be used with any measurable degree of confidence.     

Patterns of trace metal accumulation in Swedish marine nemerteans

Total body burdens of Zn, Pb, Al and Cu were measured in Swedish marine nemerteans sampled from an area close to a major source of pollution. Accumulation patterns varied both seasonally and spatially. The results suggest that nemerteans may be useful bioindicator species in environmental monitoring programmes.     

Heavy metal ions inhibition of jack bean urease: potential for rapid contaminant probing

The kinetics of heavy metal ions inhibition of jack bean urease was studied by progress curve analysis in a reaction system without enzyme-inhibitor preincubation. The inhibition was found to be biphasic with an initial, small inhibitory phase changing over the time course of 5-10 min into a final linear steady state with a lower velocity. This time-dependent pattern was best described by mechanism B of slow-binding inhibition, involving the rapid formation of an EI complex that subsequently undergoes slow conversion to a more stable EI* complex. The kinetic parameters of the process, the inhibition constants Ki and Ki* and the forward k5 and reverse k6 rate constants for the conversion, were evaluated from the reaction progress curves by nonlinear regression treatment. Based on the values of the overall inhibition constant Ki*, the heavy metal ions were found to inhibit urease in the following decreasing order: Hg2+ > Cu2+ > Zn2+ > Cd2+ > Ni2+ > Pb2+ > Co2+ > Fe3+ > As3+. With the Ki* values as low as 1.9 nM for Hg2+ and 7.1 nM for Cu2+, 100-1000 times lower than those of the other ions, urease may be utilized as a bioindicator of the trace levels of these ions in environmental monitoring, bioprocess control or pharmaceutical analysis.     

Common carp (Cyprinus carpio L.) scales as a bioindicator reflecting its exposure to heavy metals throughout life

The aim of the present study was to demonstrate the usefulness of fish scales as a bioindicator reflecting the concentrations of heavy metals in the environment as compared to typical recognized bioindicators such as the liver or kidney. Heavy metal (Zn, Mn, Cu, Cd, Fe, Ni, Pb) concentration analysis (with the atomic absorption technique) was performed in different annuli on the fish scale to characterize the metals’ accumulation in the consecutive years of the fish's life corresponding to individual scale increments. The results confirmed the usefulness of fish scales as a bioindicative tissue reflecting the condition of the environment in subsequent growing seasons. The results of the present study demonstrated that fish scales are more sensitive to the accumulation of Mn, Ni, and Pb, whose concentrations in different parts of the scales were even 10 times higher than in soft tissues, and significantly correlated with their levels in liver or kidney. In light of this finding, further studies involving controlled exposure of fish to different metals could be performed. Their results could allow for obtaining an excellent tool for monitoring the environment inhabited by fish in the present and past without the need to kill the animals.