Ecological Indicators of Native Rhizobia in Tropical Soils

The relationship between environment and abundance of rhizobia was described by determining the populations of root nodule bacteria at 14 diverse sites on the island of Maui. Mean annual rainfall at the sites ranged from 320 to 1,875 mm, elevation from 37 to 1,650 m, and soil pH from 4.6 to 7.9. Four different soil orders were represented in this study: inceptisols, mollisols, ultisols, and an oxisol. The rhizobial populations were determined by plant infection counts of five legumes (Trifolium repens, Medicago sativa, Vicia sativa, Leucaena leucocephala, and Macroptilium atropurpureum). Populations varied from 1.1 to 4.8 log₁₀ cells per g of soil. The most frequently occurring rhizobia were Bradyrhizobium spp., which were present at 13 of 14 sites with a maximum of 4.8 log₁₀ cells per g of soil. Rhizobium trifolii and R. leguminosarum occurred only at higher elevations. The presence of a particular Rhizobium or Bradyrhizobium sp. was correlated with the occurrence of its appropriate host legume. Total rhizobial populations were significantly correlated with mean annual rainfall, legume cover and shoot biomass, soil temperature, soil pH, and phosphorus retention. Regression models are presented which describe the relationship of legume hosts, soil climate, and soil fertility on native rhizobial populations.     

Verification and Rapid Identification of Soybean Rhizobia in Indian Soils

Sixty root nodule isolates of soybean rhizobia indigenous to eight field sites in India were characterized using PCR-RFLP for repeated sequence RSα a 1195-bp DNA fragment, indole acetic acid production, and nitrogenase activity. Site-dependent variations were observed in terms of IAA production and nitrogenase activities. RSα was conserved in slow-growing soybean rhizobia across locations and sites and was absent in other Rhizobiaceae members and other bacterial genera. The results suggest that RSα can be a useful molecular marker for slow-growing soybean rhizobia. The study also showed the low presence of soybean nodulating fast growers in Indian soils.     

Reliability of the Most-Probable-Number Technique for Enumerating Rhizobia in Tropical Soils

We used six rhizobium-legume systems to test the reliability of the most-probable-number (MPN) technique for enumerating rhizobia introduced into 14 sites representing four soil orders. The range-of-transition values (the number of dilution steps between the first not-entirely-positive and the last not-entirely-negative growth units) were compared for each species and for each soil. The probability that the observed data were significantly different from theoretical values varied with the species. The acceptability of MPN codes (P > 0.99) was the highest (97 to 99%) with Vicia sativa, Trifolium repens, and Glycine max and lowest (72%) with Leucaena leucocephala. Medicago sativa and Macroptilium atropurpureum yielded 87 and 75% acceptable MPN codes, respectively. The acceptability of the MPN data obtained for a host species was related to rooting habit and time to nodulation. Comparison of data for each soil indicated that, despite large differences in characteristics, the soil was not a major source of variability in the MPN counts. There was no significant interaction of the range of transition of rhizobium-legume plant infection count data between species and site.     

Population trends in bird species at Dungeness, Kent

Most wintering wildfowl species increased in numbers on the Dungeness Reserve during the period 1969-87, particularly teal, gadwall and wigeon. Wigeon, teal and gadwall showed the fastest rates of increase. An exponential model provided a better fit to the data for smew and gadwall than a linear one. Populations were more or less as variable in number in the early years of management (1969-77) as in subsequent years (1978-86).
Of wintering and passage wader species, turnstone, redshank, black-tailed godwit and common sandpiper increased. Snipe showed a decline in abundance in spring. Numbers of black terns, the only non-wading migrant analysed, remained variable over the period.
Breeding tufted duck and great-crested grebe increased in numbers during the period 1969-86 whereas mallard declined. Black-headed gull numbers increased, as did exponentially-breeding common and sandwich terns. Of four passerine species analysed, only breeding reed warblers increased during the period 1968-86, whereas numbers of breeding sedge warbler and whitethroat remained stable. Wheatear numbers declined in early years but have increased since 1983.
Increases in species richness were documented in wintering and passage, and breeding species.     

Genetic Diversity of Rhizobia Nodulating Arachis hypogaea L. in Central Argentinean Soils

The diversity of thirty-nine isolates from peanut plants growing at fourteen different sites in the Argentinean province of Córdoba was examined by rep-PCR, RFLP of PCR amplified 16S rRNA gene and complete sequencing of ribosomal genes. The genomic analysis of the peanut isolates indicated that each group encompasses heterogeneity among their members, having distinct rep fingerprints and 16S rRNA alleles. Complete sequencing of 16S rRNA demonstrated that native peanut rhizobia from Córdoba soils representative of the slow and fast growers are phylogenetically related to Bradyrhizobium japonicum and Bradyrhizobium sp. and Rhizobium giardinii and R. tropici species, respectively. The nodC gene sequence analysis showed phylogenetic similarity between fast grower peanut symbionts and Rhizobium tropici.     

Selective Medium for Recovering Specific Populations of Rhizobia Introduced into Tropical Soils

Experiments were designed to evaluate the usefulness of antifungal agents and streptomycin for recovering low densities of rhizobia inoculated into tropical soils. The results showed that yeast-mannitol agar (pH 6.0) containing 500 μg of streptomycin, 400 μg of cycloheximide and 50 μg of benomyl or chlorothalonil per ml was the best selective medium.     

Macroinvertebrate drift in the upper Wye catchment,Wales

Drift samples collected at five sites in the upper catchment of the River Wye yielded 99 taxa (excluding Chironomidae and Simuliidae). Significantly fewer taxa were collected from a site on the impounded River Elan (W4) compared with nearby River Wye sites. Mean daily density of drifting macroinvertebrates ranged from 6.3 × 10^-2 to 782.9 × 10^-2m^-3, with greatest densities during the summer months, and Ephemeroptera, Coleoptera and Diptera generally comprised the greatest proportion of animals collected. Chironomids formed a considerable proportion of collections at W4 and the relative abundance of ephemeropterans, coleopterans and trichopterans was generally significantly less at W4 than at other sites. Estimates of the total numbers of invertebrates drifting past each site varied from 8.3 × 10³ to 1 373.1 × 10³day^-1. Total numbers drifting were significantly related to estimates of total benthic density and similar relationships were established for some major taxonomic groups and some species.     

Isolation and Characterization of Alfalfa-Nodulating Rhizobia Present in Acidic Soils of Central Argentina and Uruguay

We describe the isolation and characterization of alfalfa-nodulating rhizobia from acid soils of different locations in Central Argentina and Uruguay. A collection of 465 isolates was assembled, and the rhizobia were characterized for acid tolerance. Growth tests revealed the existence of 15 acid-tolerant (AT) isolates which were able to grow at pH 5.0 and formed nodules in alfalfa with a low rate of nitrogen fixation. Analysis of those isolates, including partial sequencing of the genes encoding 16S rRNA and genomic PCR-fingerprinting with MBOREP1 and BOXC1 primers, demonstrated that the new isolates share a genetic background closely related to that of the previously reported Rhizobium sp. Or191 recovered from an acid soil in Oregon (B. D. Eardly, J. P. Young, and R. K. Selander, Appl. Environ. Microbiol. 58:1809–1815, 1992). Growth curves, melanin production, temperature tolerance, and megaplasmid profiles of the AT isolates were all coincident with these characteristics in strain Or191. In addition to the ability of all of these strains to nodulate alfalfa (Medicago sativa) inefficiently, the AT isolates also nodulated the common bean and Leucaena leucocephala, showing an extended host range for nodulation of legumes. In alfalfa, the time course of nodule formation by the AT isolate LPU 83 showed a continued nodulation restricted to the emerging secondary roots, which was probably related to the low rate of nitrogen fixation by the largely ineffective nodules. Results demonstrate the complexity of the rhizobial populations present in the acidic soils represented by a main group of N₂-fixing rhizobia and a second group of ineffective and less-predominant isolates related to the AT strain Or191.     

Diversity of Rhizobia Nodulating Phaseolus vulgaris L. in Two Kenyan Soils with Contrasting pHs

Rhizobia were isolated from two Kenyan soils with pHs of 4.5 and 6.8 and characterized on the basis of their host ranges for nodulation and nitrogen fixation, colony morphologies, restriction fragment fingerprints, and hybridization with a nifH probe. The populations of rhizobia nodulating Phaseolus vulgaris in the two soils were similar in numbers and in effectiveness of N(inf2) fixation but were markedly different in composition. The population in the Naivasha soil (pH 6.8) was dominated by isolates specific in host range for nodulation to P. vulgaris; these all had multiple copies, in most cases four, of the structural nitrogenase gene nifH. Only one of the isolates from this soil formed effective nodules on Leucaena leucocephala, and this isolate had only a single copy of nifH. By contrast, the population in the acid Daka-ini soil (pH 4.5) was composed largely of broad-host-range isolates which had single copies of nifH. The isolates from the Daka-ini soil which were specific to P. vulgaris generally had three copies of nifH, although one isolate had only two copies. These rhizobial isolates are indigenous to Kenyan soils and yet have marked similarities to previously described Rhizobium species from other continents.     

广西高峰林场相思树的真菌病害调查

相思树是从澳大利亚引进的速生丰产林种,在广西以高峰林场为主要种植基地。经初步调查,不同相思树上发生的真菌性病害不同,马占相思树、厚荚相思树、直干相思树、纹英相思树、杂交相思发生炭疽病,其病原茵为胶孢炭疽菌(Colletotrichum gloeosporioides),在马占相思、直干相思、纹荚相思和杂交相思的叶片上只产生病原菌的无性阶段,而在厚荚相思叶片上可同时出现无性阶段和有性阶段;马占相思树和杂交相思树上发生的白粉病菌为白粉菌Oidium sp．,其中杂交相思白粉病发生普遍而严重,发病期多在3-5月;黑木相思树发生叶尖枯病,病原为异色拟盘多毛孢(Pestalotiopsis versicolor),一年四季均可发病;马占相思树干基部心腐病发生严重,造成木材的大量损失,病原尚未得到确定。本文对病害的症状特点、病原菌形态特征进行了描述。     

A Venue-Based Survey of Malaria,Anemia and Mobility Patterns among Migrant Farm Workers in Amhara Region,Ethiopia

Background

Mobile populations present unique challenges to malaria control and elimination efforts. Each year, a large number of individuals travel to northwest Amhara Region, Ethiopia to seek seasonal employment on large-scale farms. Agricultural areas typically report the heaviest malaria burden within Amhara thereby placing migrants at high risk of infection. Yet little is known about these seasonal migrants and their malaria-related risk factors.

Methods and Findings

In July 2013, a venue-based survey of 605 migrant laborers 18 years or older was conducted in two districts of North Gondar zone, Amhara. The study population was predominantly male (97.7%) and young (mean age 22.8 years). Plasmodium prevalence by rapid diagnostic test (RDT) was 12.0%; One quarter (28.3%) of individuals were anemic (hemoglobin <13 g/dl). Nearly all participants (95.6%) originated from within Amhara Region, with half (51.6%) coming from within North Gondar zone. Around half (51.2%) slept in temporary shelters, while 20.5% regularly slept outside. Only 11.9% of participants had access to a long lasting insecticidal net (LLIN). Reported net use the previous night was 8.8% overall but 74.6% among those with LLIN access. Nearly one-third (30.1%) reported having fever within the past two weeks, of whom 31.3% sought care. Cost and distance were the main reported barriers to seeking care. LLIN access (odds ratio [OR] = 0.30, P = 0.04) and malaria knowledge (OR = 0.50, P = 0.02) were significantly associated with reduced Plasmodium infection among migrants, with a similar but non-significant trend observed for reported net use the previous night (OR = 0.16, P = 0.14).

Conclusions

High prevalence of malaria and anemia were observed among a young population that originated from relatively proximate areas. Low access to care and low IRS and LLIN coverage likely place migrant workers at significant risk of malaria in this area and their return home may facilitate parasite transport to other areas. Strategies specifically tailored to migrant farm workers are needed to support malaria control and elimination activities in Ethiopia.     

Studies on the Inoculation and Competitiveness of a Rhizobium leguminosarum Strain in Soils Containing Indigenous Rhizobia

The competitiveness of a Rhizobium leguminosarum strain was investigated at two separate locations in field inoculation studies on commercially grown peas. The soil at each location (sites I and II) contained an indigenous R. leguminosarum population of ca. 3 × 10⁴ rhizobia per g of soil. At site I it was necessary to use an inoculum concentration as large as 4 × 10⁷ CFU ml⁻¹ (2 × 10⁶ bacteria seed⁻¹) to establish the inoculum strain in the majority of nodules (73%). However, at site II the inoculum strain formed only 33% of nodules when applied at this (10⁷ CFU ml⁻¹) level. Establishment could not be further improved by increasing the inoculum concentration even as high as 10⁹ CFU ml⁻¹ (9.6 × 10⁷ bacteria seed⁻¹). The inoculum strain could be detected at both sites 19 months after inoculation. Analysis by intrinsic antibiotic resistance patterns and plasmid DNA profiles indicated that a dominant strain(s) and plasmid pool existed among the indigenous population at site II. Competition experiments were carried out under laboratory conditions between a dominant indigenous isolate and the inoculum strain. Both strains were shown to be equally competitive.     

Evaluation of a Tuberculosis Mass Survey Conducted in the City of Chatham and in Kent County,Ontario, in 1963

Computer analysis of the results of a mass tuberculosis survey of the population of Chatham city and Kent County, Ontario, was carried out to assess the efficacy of such surveys as a case-finding device. Six cases of active tuberculosis were found during the survey and approximately 50% of the 89,427 inhabitants of Chatham and Kent County were surveyed with radiographs and Heaf skin tests.A follow-up study of the Heaf test conducted in the public school of Wallaceburg detected 70 Heaf-positive children out of a total of 1190. These Heaf-positive children were further tested with a Mantoux test (5 T.U.) and chest radiography. Only 11 children of the original 70 were Mantoux-positive.These findings further support the hypothesis that the Heaf test, as now read, over-reads for M. tuberculosis infections.