A new synthetic method for ruthenium complexes of β-diketones from ‘ruthenium blue solution’ and their properties

The ‘ruthenium blue solution’ obtained by reducing hydrated ruthenium(III) trichloride with ethanol was used a convenient starting material in the synthesis of thirteen tris(β-diketonato)ruthenium (III) and six tris(β-diketonato)ruthenate(II) complexes. The procedure of preparing the ‘ruthenium blue solution’ requires no catalyst and is much simpler than the previous methods. A variety of complexes were synthesized in good yields with small changes of the conditions. The Hammett constants of the substituents on the ligand serve as a helpful guide for choosing the operating conditions for the preparation of β-substituted complexes. The yields of the complexes with β-substituted ligands are relatively small, since the presence of a bulky substituent at the β-position decreases the fraction of the enol form of the free ligand. The melting points, magnetic moments, R_f values in TLC, UV-Vis, IR, and ¹H NMR spectra were measured. The substituent effects on these properties are discussed.     

Haloalkyl complexes of the transition metals. Part 5. The synthesis and reactions of some new pentamethylcyclopentadienyl halomethyl and methoxymethyl complexes of molybdenum(II) and tungsten(II) and the X-ray crystal structure of the cationic ylide complex [η-C5Me5W(CO)3CH2PPh3]I

Synthetic routes are described for the new halo- methyl complexes of the type [η-C₅Me₅M(CO)₃- CH₂X]. The complexes where M = Mo, X = Cl or OMe and M = W, X = Cl, I, OMe have been fully characterized. Reaction of [η-C₅Me₅Mo(CO)₃CH₂Cl] with PPh₃ in methanol under reflux or acetonitrile at room temperature gives [η-C₅Me₅Mo(CO)₂(PPh₃)- Cl], whereas reaction of [η-C₅Me₅W(CO)₃CH₂I] with PPh₃ under similar conditions gives the cationic phosphorus ylide complex [η-C₅Me₅W(CO)₃CH₂- PPh₃]I. The structure of this ylide complex has been determined by X-ray crystallography. The complex crystallizes with half a molecule of CH₂Cl₂ in the monoclinic space group P2₁/n with a = 16.616- (8), b = 11.738(6), c = 18.126(9) Å, β = 101.74(2)° and Z = 4. The structure was solved and refined to R = 0.076. It confirms the formulation of the compound and the presence of the ylide ligand, WC_ylide 2.34(2) Å, PC_ylide 1.82(2) Å and the WC_ylideP angle of 119(1)°.     

The photolytic release of copper from the copper penicillamine complex [Cu(II)6Cu(I)8(D-penicillamine)12Cl]5−

The light sensitivity of CuPen ([Cu(II)₆Cu(I)₈(D-penicillamine)₁₂Cl]⁵⁻ was examined. The wavelength range of the photolytic activity was determined in the visible and near-ultraviolet region of the electromagnetic spectrum. No photolytic activity was observed above 450 nm. The quantum yield of copper release was measured between 450 nm and 250 nm and was found to increase from 0 to 0.1. A shoulder around 400 nm corresponding to electronic absorption and CD features was observed in the photo-action spectrum. Inhibition of formazan formation from nitroblue tetrazolium mediated by xanthine oxidase-generated superoxide was used to quantify the copper release as a result of the photolytic decomposition of CuPen. The influence of oxygen on the photolytic reaction was investigated by EPR and electronic absorption spectroscopy. In the absence of oxygen, visible light induces almost total bleaching. However, EPR reveals only slight changes in the spin concentration. Upon introduction of aerobic EDTA all of the copper is immediately oxidised to Cu(II).     

Relationships between the structure of 6-allyl-6,8-diazabicyclo[3.2.2]nonane derivatives and their σ receptor affinity and cytotoxic activity

A series of bridged piperazine derivatives was prepared and the affinity toward σ₁ and σ₂ receptors by means of radioligand binding assays as well as the inhibition of the growth of six human tumor cell lines was investigated. All possible stereoisomers of the 2-hydroxy, 2-methoxy, 2,2-dimethoxy, 2-oxo, and 2-unsubstituted 6,8-diazabicyclo[3.2.2]nonanes were prepared in a chiral pool synthesis starting with (S)- and (R)-glutamate. A Dieckmann analogous cyclization was the key step in the synthesis of the bicyclic framework. The configuration in position 2 was established by a diastereoselective LiBH₄ reduction and subsequent Mitsunobu inversion. Structure–affinity relationships demonstrate that substituents in position 2 decrease σ₁ receptor affinity which might be due to unfavorable interactions with the σ₁ receptor protein. Without a substituent in position 2 high σ₁ affinity was obtained (23a ((+)-(1S,5S)-6-allyl-8-(4-methoxybenzyl)-6,8-diazabicyclo[3.2.2]nonane): K_i = 11 nM). Experiments with six human tumor cell lines showed a weak but selective growth inhibition of the human small cell lung cancer cell line A-427 by the methyl ethers ent-16b (IC₅₀ = 18.9 μM), 21a (IC₅₀ = 16.4 μM), ent-21a (IC₅₀ = 20.4 μM), and 21b (IC₅₀ = 27.1 μM) and the unsubstituted compounds 23a and 23b (42% inhibition at 20 μM).     

f-Element/crown ether complexes. 16. Synthesis,crystallization and crystal structure of [Dy(OH2)8]Cl3·18-crown-6·4H2O

When crystals of [Dy(OH₂)₇(OHMe)] [DyCl(OH₂)₂(18- crown-6)]₂Cl₇·2H₂O [1] are allowed to warm from 5 °C to ambient temperature (22 °C) under the original solvent mixture (1:3 CH₃OH: CH₃CN), they redissolve and the title complex can be isolated by slow evaporation of the resulting solution. The crystal structure of this complex, [Dy(OH₂)₈]Cl₃·18-crown-₆·4H₂O, has been determined. It crystallizes in the monoclinic space group, P2₁/c, with a = 10.395(1), b = 18.684(1), c = 16.259- (3) Å, β= 102.56(1)°, and D_calc = 1.61 g cm⁻³ for Z = 4. A final conventional R value of 0.041 was obtained by least-squares refinement using 3453 independent observed [F_o⩾5σ(F_o)] reflections. The [Dy(OH₂)₈]³⁺ cations and crown ether molecules are hydrogen bonded in a polymeric chain with the crown molecules separating the cations and a total of seven DyOH₂···O(crown ether) hydrogen bonds. The chains are connected by a hydrogen bonding network consisting of the cations, chloride ions, and uncoordinated water molecules. The geometry of the cation is best described as a bicapped trigonal prism with distortions on the reaction pathway toward dodecahedral symmetry. The two capping atoms average 2.41(1) Å from Dy, the remaining DyO distances average 2.38(2) Å. The 18-crown-6 molecule has the D_3d conformation normally observed except for a distortion of one OCCO unit containing the oxygen atom accepting two hydrogen bonds.     

New double salt [PCl4]3[TiCl6][PCl6] and related compounds in the PCl5TiCl4 system. Synthesis and structural determination by Raman spectra and X-ray analysis

The preparation of the newly identified double salt [PCl₄]₃[TiCl₆][PCl₆] is described herein. Its structure is elucidated by both X-ray analysis and Raman spectrum. This compound is tetragonal, space group P4₂/mbc with a = 14.648(1) Å, c = 13.922(1) Å, V = 2987(1) ų and Z = 4, and is isostructural with the related tin compound. The structure was refined by least-squares to R = 4.3%, using 668 observed reflections. Raman spectra of [PCl₄]₂[Ti₂Cl₁₀] and [PCl₄][Ti₂Cl₉] were also reinvestigated and, as a result, some reassignments are proposed.     

Further studies on the copper(II) complexes of lysine: [Cu(II)(H3N·C5H10·CH·NH2·COO)2] [HgI3]2

Spontaneous resolution in the formation of the [HgI₃]⁻ salts of the copper complex of racemic lysine was previously reported. X-ray and IR studies were used to support this conclusion. Gas chromatographic studies using a chiral phase on the crystals originally studied, and on newly formed crystals using D,L-lysine, do not substantiate the suggestion that spontaneous resolution occurs.     

M?ssbauer studies of Escherichia coli sulfite reductase complexes with carbon monoxide and cyanide. Exchange coupling and intrinsic properties of the [4Fe-4S] cluster

M?ssbauer studies of the hemoprotein subunit (SiR) of E. coli sulfite reductase have shown that the siroheme and the [4Fe-4S] cluster are exchange-coupled. Here we report M?ssbauer studies of SiR complexed with either CO or CN- and of SiR in the presence of the chaotropic agent dimethyl sulfoxide (Me2SO). The spectra of one-electron-reduced SiR X CN show that all five iron atoms reside in a diamagnetic environment; the ferroheme X CN complex is low spin and the [4Fe-4S] cluster is in the 2+ oxidation state. Titration with ferricyanide affords a CN- complex of oxidized SiR in which the siroheme iron is low spin ferric, with the cluster remaining in the 2+ state. At low temperatures, paramagnetic hyperfine interactions are observed for the iron sites of the cluster, suggesting that it is exchange-coupled to the heme iron. Reduction of one-electron-reduced SiR X CN and SiR X CO yields complexes with "g = 1.94"-type EPR signals showing that the second electron is accommodated by the iron-sulfur cluster. The fully reduced complexes yield well resolved M?ssbauer spectra which were analyzed in the spin Hamiltonian formalism. The analysis shows that the cluster subsites are equivalent in pairs, one pair having properties reminiscent of ferric sites whereas the other pair has features more typical of ferrous sites. The M?ssbauer spectra of oxidized SiR kept in 60% (v/v) Me2SO are virtually identical with those observed for SiR in standard buffer, implying that the coupling is maintained in the presence of the chaotrope. Fully reduced SiR displays an EPR signal with g values of g = 2.53, 2.29, and 2.07. In 60% Me2SO, this signal vanishes and a g = 1.94 signal develops; this transition is accompanied by a change in the spin state of the heme iron from S = 1 (or 2) to S = O.     

An Efficient Method for the Synthesis of [4–15N]Cytidine, 2′-Deoxy[4–15N]Cytidine, [6–15N]adenosine,and 2′-Deoxy [6–15N]adenosine Derivatives

Abstract

Nucleophilic substitution reactions of 4-azolyl-1 β-P-D-ribofuranosylpyrimidin-2(1H)-one and 6-azolyl-9-β-D-ribofuranosyl-9H-purine derivatives, which were converted from uridine and inosine, with [¹⁵N]phthalimide in the presence of triethylamine or DBU gave N ⁴-phthaloyl[4-¹⁵N]cytidine and N ⁶-phthaloyl[6-¹⁵N]- adenosine derivatives, respectively, in high yields. Similar reactions of those azolyl derivatives with succinimide afforded N ⁴-succinylcytidine and N ⁶-succinyladenosine derivatives in high yields. The corresponding 2′-deoxyribonucleosides were also synthesized efficiently through the same procedure.

     

The Hypothetical Protein ‘All4779’, and Not the Annotated ‘Alr0088’ and ‘Alr7579’ Proteins,Is the Major Typical Single-Stranded DNA Binding Protein of the Cyanobacterium,Anabaena sp. PCC7120

Single-stranded DNA binding (SSB) proteins are essential for all DNA-dependent cellular processes. Typical SSB proteins have an N-terminal Oligonucleotide-Binding (OB) fold, a Proline/Glycine rich region, followed by a C-terminal acidic tail. In the genome of the heterocystous nitrogen-fixing cyanobacterium, Anabaena sp. strain PCC7120, alr0088 and alr7579 are annotated as coding for SSB, but are truncated and have only the OB-fold. In silico analysis of whole genome of Anabaena sp. strain PCC7120 revealed the presence of another ORF ‘all4779’, annotated as a hypothetical protein, but having an N-terminal OB-fold, a P/G-rich region and a C-terminal acidic tail. Biochemical characterisation of all three purified recombinant proteins revealed that they exist either as monomer or dimer and bind ssDNA, but differently. The All4779 bound ssDNA in two binding modes i.e. (All4779)₃₅ and (All4779)₆₆ depending on salt concentration and with a binding affinity similar to that of Escherichia coli SSB. On the other hand, Alr0088 bound in a single binding mode of 50-mer and Alr7579 only to large stretches of ssDNA, suggesting that All4779, in all likelihood, is the major typical bacterial SSB in Anabaena. Overexpression of All4779 in Anabaena sp. strain PCC7120 led to enhancement of tolerance to DNA-damaging stresses, such as γ-rays, UV-irradiation, desiccation and mitomycinC exposure. The tolerance appears to be a consequence of reduced DNA damage or efficient DNA repair due to increased availability of All4779. The ORF all4779 is proposed to be re-annotated as Anabaena ssb gene.     

The formation and reactivity of sulfito complexes of tetraethylenepentamine-cobalt(III): X-ray structure of αα-[co(tetren)SO3]ClO4

The synthesis of complexes of the type Co(tetren)-OH₂³⁺ (tetren = tetraethylenepentamine) and their reactions with sulfite to produce O- and S-bonded isomers were studied in detail. The linkage isomerization reaction of αβS-Co(tetren)OSO₂⁺ to αβS-Co(tetren)SO₃⁺ is accompanied by a geometrical isomerization to αα-Co(tetren)SO₃⁺. The latter species was isolated as pure crystals and an X-ray structure was determined. The structure data clearly show the strong trans effect of the sulfito ligand, which may account for the geometrical isomerization process.