Comparative evolution of P-M system and infection by the sigma virus in French and Spanish populations of Drosophila melanogaster.

In 1983, an extensive survey of populations of D. melanogaster was started in a southern French region (Languedoc) in two non-Mendelian systems: the P-M system of transposable elements and the hereditary Rhabdovirus sigma. Unexpectedly fast-evolving phenomena were observed and interesting correlations were noted, giving similar geographical pattern to the region in both systems. For these reasons, the analysis was continued and extended towards the north (Rh?ne Valley) and the south (Spain). In the P-M system, all the Languedoc populations evolved from 1983 to 1991 towards the Q type which is characteristic of the Rh?ne Valley populations. In contrast, M' strains are currently observed in the southernmost French populations and in all Spanish ones, so that there is a clear pattern in their geographical distribution. The frequency of flies infected by the sigma virus dramatically increased from 1983 to 1988 in Languedoc; this increase was clearly correlated with some viral characteristics. But, in northern France, similar characteristics did not trigger any increase in the frequency of infected flies. The data presented here show that the distinctive features of Languedoc extend northwards through the Rh?ne Valley up to Lyon and disappears southwards before the Spanish border.     

Characterisation of the digital dermatoglyphic in a berber population of the high Atlas (Marrakesh, Morrocco)

With an aim of characterising the genetic structure of the Berber population, of the Western High Atlas (Marrakesh), and of locating it compared to the other known populations, a preliminary study of the digital dermatoglyphes relating to a sample of 100 individuals (50 men and 50 women) non related taken at random in the population of the commune of Asni (Wilaya de Marrakesh) was carried out. The frequencies of the digital figures obtained in this population are respectively 50.2% of the ulnar loops, 40.6% of the whorls, 7.7% of the archs and 1.5% of the radial loops. No significant difference between the two sexes has been observed. Compared with other Moroccan populations, while basing, oneself on the relatively frequency of the arch, one raises more resemblance of our population (9.2% among women and 6.2% among the men) to the Arab population of the region of Doukkala (8.85% at the men and 7.2% among women) that with the Berber population of the Middle Atlas (5.26% at the men and 5.63% among women). Compared with other Mediterranean populations, the Berber of the High-Atlas remain among the populations which present a higher arch percentage. The analysis of affinities of the digital figures between the population object, of the study and those of the Mediterranean by the Euclidean distances show that this one presents characteristics which differentiates, it from the other populations. One can not however, that conversely with other Moroccan populations analysed, the one becomes attached more to the group, of populations of south of the Mediterranean (Arab and Berber) than to the group of the north populations of mediterranean area (Spain, France and Italy).     

Selective sweeps and intercontinental migration in the cosmopolitan moss Ceratodon purpureus (Hedw.) Brid

The moss Ceratodon purpureus has long been used as a model system in plant development and physiology. However, the molecular population genetics of the species remains virtually unexplored. In this study, we used population genetic analyses of DNA sequence data from three unlinked loci (atpB-rbcL spacer, adk, and phy2) to examine biogeographical patterns in a global sample of this species. The three loci differed significantly in mutation frequency spectra and implied population structure. Pairs of haplotypes from single populations were frequently more divergent than haplotypes sampled from widely disjunct populations. In the atpB-rbcL spacer and adk samples, Australasian haplotypes were more closely related to Northern Hemisphere haplotypes than to haplotypes found in the equatorial regions. In contrast, the phy2 sample showed that the north and south temperate regions were genetically divergent, with the equatorial regions intermediate. Maximum-likelihood estimates (MLE) of the rates of migration between the two hemispheres were significantly different for the two nuclear genes. The frequency spectra of mutations indicated that differences in implied population structure among the three loci resulted from directional selection on the chloroplast genome and on the chromosomal segment containing adk. Collectively, these data suggest that long-distance migration within the Northern Hemisphere and Australasian regions is common (relative to the mutation rate) and that migration between these two regions, potentially via equatorial populations, is more frequent than migration among equatorial populations.     

Directional dispersal between mid-ocean ridges: deep-ocean circulation and gene flow in Ridgeia piscesae

This study examined relationships between bathymetrically induced deep-ocean currents and the dispersal of the hydrothermal vent tubeworm Ridgeia piscesae along the northeast Pacific ridge system. A robust diagnostic model of deep-ocean circulation in this region predicted strong southeasterly currents following contours of the Blanco Transform Fault, a 450-km lateral offset that separates the Gorda and Juan de Fuca ridge systems. Such currents should facilitate the southward dispersal of R. piscesae larvae. Immigration rates for populations north and south of the Blanco Transform Fault were estimated from molecular population genetic data. Mitochondrial DNA evidence revealed population subdivision across the Blanco Transform Fault, and a strong directional bias in gene flow that was consistent with predictions of the circulation model. The distribution of mitochondrial diversity between the northern and southern populations of R. piscesae suggests that the Gorda Ridge tubeworms have maintained larger effective population sizes than the northern populations, a pattern that also exists in co-occurring limpets. Together, these data suggest that the northern vent fields may experience a higher frequency of habitat turnover and consequently more rapid losses of genetic diversity.     

PI and TF subtypes in Chuetas (Majorcan Jews).

PI and TF subtypes were studied in a sample of 137 individuals of the Chueta population. In addition to the PI*M alleles, PI*S, PI*Z, and PI*F were observed in the PI system. In the TF system no TF*B or TF*D alleles were found. PI results were compared with those of some Jewish and non-Jewish populations. The relatively high frequency of PI*S is indicative of a substantial Spanish influence. There are no previous data available on TF*C subtypes in Jews. The very low TF*C3 frequency in Chuetas (lower than in Spain) indicates that this allele may be extremely rare or absent in other Jewish populations.     

Vertebral pathologies and related activity patterns in two mediaeval populations from Spain

The main aim of this study was to explore the usefulness of several types of vertebral pathology as activity markers in osteological populations. A total of 2165 vertebrae from 124 individuals were studied. They were derived from cemeteries in two villages: Villanueva de Soportilla (Burgos, north of Spain), with a Christian population, and La Torrecilla (Granada, south of Spain), inhabited by Muslims. Degenerative joint diseases, Schmorl's nodes, compression fractures and spondylolysis with spondylolisthesis were analysed in individuals and separate vertebral pieces. All pathological conditions, except compression fractures, were significantly more frequent in males than in females, reflecting more intensive labour conditions for males. They were significantly more frequent in males from Villanueva, a border population of peasant-soldiers, than in males from La Torrecilla. They were also significantly more frequent in females from Christian Villanueva than in those from Muslim La Torrecilla, where the women mainly worked at home. The benefits and limitations of the study of these vertebral pathologies are discussed.     

Phylogeography of the invasive weed Hypochaeris radicata (Asteraceae): from Moroccan origin to worldwide introduced populations

In an attempt to delineate the area of origin and migratory expansion of the highly successful invasive weedy species Hypochaeris radicata, we analysed amplified fragment length polymorphisms from samples taken from 44 populations. Population sampling focused on the central and western Mediterranean area, but also included sites from Northern Spain, Western and Central Europe, Southeast Asia and South America. The six primer combinations applied to 213 individuals generated a total of 517 fragments of which 513 (99.2%) were polymorphic. The neighbour-joining tree presented five clusters and these divisions were supported by the results of Bayesian analyses: plants in the Moroccan, Betic Sierras (Southern Spain), and central Mediterranean clusters are all heterocarpic. The north and central Spanish, southwestern Sierra Morena, and Central European, Asian and South American cluster contain both heterocarpic (southwestern Sierra Morena) and homocarpic populations (all other populations). The Doñana cluster includes two homocarpic populations. Analyses of fragment parameters indicate that the oldest populations of H. radicata are located in Morocco and that the species expanded from this area in the Late Quaternary via at least three migratory routes, the earliest of which seems to have been to the southwestern Iberian Peninsula, with subsequent colonizations to the central Mediterranean area and the Betic Sierras. Homocarpic populations originated in the southwestern Iberian Peninsula and subsequently spread across north and central Spain, Central Europe and worldwide, where they became a highly successful weed.     

The retreat of large brown seaweeds on the north coast of Spain: the case of Saccorhiza polyschides

Recent changes in kelp distribution along the north coast of Spain are described and analysed through a long-term population study focused on Saccorhiza polyschides. The main purpose of this work was to understand which population processes are more sensitive to increased sea surface temperatures and reductions in the intensity of upwelling episodes in the current scenario of global warming. Data on the distribution of kelp species (old and recent data) were obtained from the literature and compared with current species distributions assessed by field sampling between 2007 and 2010 and covering a transition coastline of 200 km. The long-term population study of Saccorhiza polyschides was conducted at a site close to the edge of its current distribution. Data for recruitment, growth and survival, as well as density and supported biomass of populations collected since the 1990s were analysed using data from the late 1970s for comparison. Kelps on the north coast of Spain have shown a westward retreat since the 1980s. Dense populations of Saccorhiza polyschides, the most important species, and Laminaria ochroleuca have been reduced to small patches and isolated individuals east of Peñas Cape (43° 39.4′ N; 5° 50.8′ W). The long-term study of Saccorhiza polyschides populations showed a collapse in the growth of the sporophyte and very low recruitment from the beginning of this century. The possible causal factors of this population decline and its consequences are considered, suggesting that long warm summer periods (more than 30 consecutive days of seawater temperature?>?20°C) could alter kelp performance.     

Influence of spatial structure on genetic isolation in Plebejus argus populations (Lepidoptera: Lycaenidae)

Populations of Plebejus argus were sampled in southwest Finland, both on the mainland and on islands, and in and around the Do?ana National Park in southwest Spain. A total of 453 individuals coming from 14 locations were investigated using allozyme electrophoresis on a total of 10 polymorphic allozyme loci. Contrary to earlier studies, all conducted in Britain, our samples showed little differentiation between sampled locations. In Spain, the populations of the Dona?a area showed no differentiation despite being up to 36 km apart; only the population to the south of the Guadalquivir river showed a significant difference to the others. In Finland the population on one island showed marked genetic differentiation from all the others, which showed little or no difference from each other. No isolation-by-distance effect could be detected in either system. We hypothesise that emigration-immigration events are more frequent in the Spanish and Finnish populations than in the British ones. We did, however, find two isolated populations, one in Spain and one in Finland; both were small and geographically isolated and shared evident drift.     

Multiple genetic divergences and population expansions of a Mediterranean sandfly,Phlebotomus ariasi,in Europe during the Pleistocene glacial cycles

Phlebotomus ariasi is one of the two sandflies transmitting the causative agent of zoonotic leishmaniasis, Leishmania infantum, in France and Iberia, and provides a rare case study of the postglacial re-colonization of France by a Mediterranean species. Four DNA sequences were analysed—mitochondrial cytochrome b (cyt b), nuclear elongation factor-1α (EF-1α) and two anonymous nuclear loci—for 14–15 French populations and single populations from northeast Spain, northwest Spain, Portugal and Morocco. The presence of cryptic sibling species was not revealed by phylogenetic analyses and testing for reproductive isolation between sympatric populations defined by the two most divergent cyt b haplogroups. No locus was shown to be under positive directional or balancing selection and, therefore, molecular variation was explained demographically. Each nuclear locus showed shallow isolation by distance from Portugal to the French Pyrenees, but for both cyt b and EF-1α there was then a step change to the upland Massif Central, where leading-edge populations showed low diversity at all loci. Multiple genetic divergences and population expansions were detected by analyses of cyt b and dated to the Pleistocene. Endemicity of one cyt b sub-lineage suggested the presence of a refuge north of the Pyrenees during the last glacial period. Monopolization of the Massif Central by genetically differentiated populations of P. ariasi might possibly hinder the northwards spread of leishmaniasis.     

Distinctive KIR and HLA diversity in a panel of north Indian Hindus

HLA and KIR are diverse and rapidly evolving gene complexes that work together in human immunity mediated by cytolytic lymphocytes. Understanding their complex immunogenetic interaction requires study of both HLA and KIR diversity in the same human population. Here a panel of 72 unrelated north Indian Hindus was analyzed. HLA- A, B, C, DRB1, DQA1, and DQB1 alleles and their frequencies were determined by sequencing or high-resolution typing of genomic DNA; KIR genotypes were determined by gene-specific typing and by allele-level DNA typing for KIR2DL1, 2DL3, 2DL5, 3DL1, and 3DL2. From HLA analysis, the north Indian population is seen to have several characteristics shared either with Caucasian or East Asian populations, consistent with the demographic history of north India, as well as specific features, including several alleles at high frequency that are rare or absent in other populations. A majority of the north Indian KIR gene profiles have not been seen in Caucasian and Asian populations. Most striking is a higher frequency of the B group of KIR haplotypes, resulting in equal frequencies for A and B group haplotypes in north Indians. All 72 members of the north Indian panel have different HLA genotype and different KIR genotype.     

Genetic evidence for multiple introduction events of raccoons (Procyon lotor) in Spain

The common raccoon (Procyon lotor) is endemic to Central and North America, although non-native populations have become established around the world. In Spain, growing evidence of the introduction of raccoons has been reported across the country in the last decade, especially in Central Spain where the largest population is thought to occur. We used mitochondrial and microsatellite DNA data to investigate the genetics of invasive raccoons in Central Spain and to infer: the number of introduction events, the number of founders and the genetic variability of the introduced populations compared to a native population. We found that at least two introduction events have occurred along the Jarama and Henares Rivers in Central Spain, which currently constitute two genetically differentiated subpopulations. In both localities the number of effective founders from a native population was estimated as 2–4 individuals. These newly founded populations have expanded and show evidence of incipient contact and reproduction between them. This may allow for an increase in the genetic variability and adaptive potential of the population(s), possibly increasing the difficulty of controlling this invasive species. Our results reveal the ability to longitudinally monitor the genetics of the raccoon range expansion and emphasize the urgent need to control the pet trade of potentially invasive species.     

Gene flow in great bustard populations across the Strait of Gibraltar as elucidated from excremental PCR and mtDNA sequencing

Recent advances in molecular biology have made it possible to use the trace amounts of DNA in faeces to non-invasively sample endangered species for genetic studies. Here we use faeces as a source of DNA and mtDNA sequence data to elucidate the relationship among Spanish and Moroccan populations of great bustards. 834 bp of combined control region and cytochrome-b mtDNA fragments revealed four variable sites that defined seven closely related haplotypes in 54 individuals. Morocco was fixed for a single mtDNA haplotype that occurs at moderate frequency (28%) in Spain. We could not differentiate among the sampled Spanish populations of Cáceres and Andalucía but these combined populations were differentiated from the Moroccan population. Estimates of gene flow (Nm = 0.82)are consistent with extensive observations on the southern Iberian peninsular indicating that few individuals fly across the Strait of Gibraltar. We demonstrate that both this sea barrier and mountain barriers in Spain limit dispersal among adjacent great bustard populations to a similar extent. The Moroccan population is of high ornithological significance as it holds the only population of great bustards in Africa. This population is critically small and genetic and observational data indicate that it is unlikely to be recolonised via immigration from Spain should it be extirpated. In light of the evidence presented here it deserves the maximum level of protection. This revised version was published online in July 2006 with corrections to the Cover Date.     

The timing of breeding and moult of the Lesser Striped Swallow Hirundo abyssinica

The Lesser Striped Swallow seems to have two different breeding populations. The birds south of 10°S breed largely during the spring and summer (July to April) and moult from about April to August. Birds further north breed throughout the year, but mainly during the first seven months of the year. Moult in the birds north of 10°S is from July to February when few birds are breeding. There seem to be two clearly defined moulting populations, with the southern breeding population moulting largely south of 10°S and the east African breeding population moulting largely north of the equator. In both populations moult and breeding seem to be separated in time, at least at the individual level.     

Phylogeography of Iberian Discoglossus (Anura: Discoglossidae)

The genus Discoglossus (Anura, Discoglossidae) comprises five morphologically similar species. Molecular analyses have found high values of genetic differentiation among these cryptic taxa and confirmed the existence of two Iberian endemic lineages ( Discoglossus galganoi and D. jeanneae ) and a distinct lineage of uncertain origin representing a third species in NE Spain. In order to analyse the pattern of geographical distribution of haplotype diversity within Iberian Discoglossus and test the hypothesis of an Algerian origin for populations in NE Spain sequence data has been resolved from 35 populations of D. galganoi and D. jeanneae on the Iberian Peninsula and samples from NE Spain and north Africa. I analysed 959 bp corresponding to partial sequences of cytochrome b and nad 4 and found extremely low values of sequence divergence among populations of D. jeanneae . Three clades can be recognized within D. galganoi , however, and a statistically significant association with geography can be explained as a result of past fragmentation. Sequence data strongly support an Algerian origin for populations of Discoglossus from NE Spain. Finally, the taxonomic status of Discoglossus in Morocco is discussed and its elevation to species status as Discoglossus scovazzi Camerano, 1878 is suggested.     

Physical mapping of rDNA and satDNA in A and B chromosomes of the grasshopper Eyprepocnemis plorans from a Greek population

Adult males and females of the grasshopper Eyprepocnemis plorans from a Greek population were analysed by C-banding, silver impregnation and double FISH for two DNA probes, i.e. ribosomal DNA (rDNA) and a 180-bp tandem repeat DNA (satDNA). This population shows characteristics of rDNA location in A chromosomes that are intermediate between those previously reported for eastern (Caucasus) and western (Spain and Morocco) populations. The four rDNA clusters revealed by FISH in chromosomes X, 9, 10 and 11 in Greek specimens imply two more than the two observed in chromosomes 9 and 11 in the Caucasus, but less than the 12 observed in all chromosomes in Morocco. Remarkably, the X chromosome bears one of the new rDNA locations in Greece with respect to the Caucasus, but it appears to be inactive, in contrast to X chromosomes in western populations, which are usually active. B chromosomes were very frequent in the Greek population, and three variants differing in size were observed, all of these being largely composed of rDNA, with the exception of a small pericentromeric satDNA cluster. The high B frequency suggests that B chromosomes in this population might behave parasitically, in resemblance to Bs in western populations.     

Impact of mountain chains, sea straits and peripheral populations on genetic and taxonomic structure of a freshwater turtle, Mauremys leprosa (Reptilia, Testudines, Geoemydidae)

Mauremys leprosa, distributed in Iberia and North‐west Africa, contains two major clades of mtDNA haplotypes. Clade A occurs in Portugal, Spain and Morocco north of the Atlas Mountains. Clade B occurs south of the Atlas Mountains in Morocco and north of the Atlas Mountains in eastern Algeria and Tunisia. However, we recorded a single individual containing a clade B haplotype in Morocco from north of the Atlas Mountains. This could indicate gene flow between both clades. The phylogenetically most distinct clade A haplotypes are confined to Morocco, suggesting both clades originated in North Africa. Extensive diversity within clade A in south‐western Iberia argues for a glacial refuge located there. Other regions of the Iberian Peninsula, displaying distinctly lower haplotype diversities, were recolonized from within south‐western Iberia. Most populations in Portugal, Spain and northern Morocco contain the most common clade A haplotype, indicating dispersal from the south‐western Iberian refuge, gene flow across the Strait of Gibraltar, and reinvasion of Morocco by terrapins originating in south‐western Iberia. This hypothesis is consistent with demographic analyses, suggesting rapid clade A population increase while clade B is represented by stationary, fragmented populations. We recommend the eight, morphologically weakly diagnosable, subspecies of M. leprosa be reduced to two, reflecting major mtDNA clades: Mauremys l. leprosa (Iberian Peninsula and northern Morocco) and M. l. saharica (southern Morocco, eastern Algeria and Tunisia). Peripheral populations could play an important role in evolution of M. leprosa because we found endemic haplotypes in populations along the northern and southern range borders. Previous investigations in another western Palearctic freshwater turtle (Emys orbicularis) discovered similar differentiation of peripheral populations, and phylogeographies of Emys orbicularis and Mauremys rivulata underline the barrier status of mountain chains, in contrast to sea straits, suggesting common patterns for western Palearctic freshwater turtles.     

The neo-XY system of Catantops humilis (Acrididae: Catantopinae) in Malaysia

Catantops humilis lives on the leguminous covercrop in young rubber and oil palm plantations on the coastal plains of Peninsular Malaysia. The grasshopper has high dispersal capability, and migrates when the trees mature, so distribution of populations changes regularly. Southern populations have normal 2 n =23, XO/24, XX complements. In Selangor State two morphologically indistinguishable chromosomal forms comprising XO and neo-XY males with basic homozygote and fusion heterozygote females, exist sympatrically in the same microhabitat in eight localities. In one population where occasional sharp reduction in numbers and migration occur, the centric rearrangement has attained a 40–50% frequency. A further mixed population was found 300 km north. Consideration is given to the possibilities that these mixed populations are part of a broad region of hybridization between two chromosomal races, or that they represent a widespread polymorphism.     

中国银额果蝇自然群体B染色体的分布

经对我国银额果蝇自然群体Ｂ染色体（Ｂｓ）的分布进行多年广泛地调查,共作过２４个群体,５７２个单雌系,６７３８只个体的观察。从细胞和群体水平研究Ｂｓ的地理分布。结果发现,中国（除台湾省外）银额果蝇自然群体中普遍存在Ｂｓ。结合前人报道得出。Ｂｓ的地理分布出现了由东向西和由南向北的规律性的依次升高趋势。这种跨越不同地理环境的区域性梯度变异与其宿主向大陆内地扩散的推论相符。Ｂｓ频率最高（８７．７％）的是海     

First evidence of pupal summer diapause in Pieris brassicae L.: the evolution of local adaptedness

Pieris brassicae L. is adapted to a wide variety of local climates throughout the Palaeartic by means of geographic variation in daylengths and temperatures triggering winter diapause. We report for the first time a population from Sotogrande in southern Spain (strain S) that additionally exhibits a pronounced summer diapause in the pupal stage as a response to long daylengths. As well as having diapause triggered by long daylengths, this population develops directly at short, ecologically relevant daylengths. This unusual short-day type response is expressed at temperatures of 21 degrees C and above. The absence of cryptic summer diapause in a population from southern France indicates that this summer diapause evolved locally in Spain or Northern Africa in a population of P. brassicae which lacked this trait. The PPRs of strains S, H (Denmark) and B (France) and crosses between them suggest that summer diapause is inherited as a recessive allele which has a clinal decrease of frequency in populations northwards. The population from southern France shows that this simple pattern of inheritance is further modified by an unknown genetic mechanism controlling the expression of summer diapause near the border between aestivating and non-aestivating populations. On the basis of the photoperiodic response and climatic data we predict P. brassicae to have five or more generations each year in southern Spain.