Mitochondrial diversity analysis of Glossina palpalis gambiensis from Mali and Senegal

West African riverine tsetse populations of Glossina palpalis gambiensis Vanderplank (Diptera: Glossinidae) were investigated for gene flow, inferred from mitochondrial diversity in samples of 69 flies from Senegal and 303 flies from three river drainages in Mali. Four polymorphic mitochondrial loci were scored. Mean haplotype diversities were 0.30 in Mali, 0 in Senegal and 0.18 over both Mali and Senegal. These diversities estimate the probabilities that two randomly chosen tsetse have different haplotypes. Substantial rates of gene flow were detected among flies sampled along tributaries belonging to the river basins of the Senegal, Niger, and Bani in Mali. There was virtually no gene flow between tsetse in Senegal and Mali. No seasonal effects on gene flow were detected. The implications of these preliminary findings for the implementation of area-wide integrated pest management (AW-IPM) programmes against riverine tsetse in West Africa are discussed.     

No suggestion of hybridization between the vulnerable black-faced impala (Aepyceros melampus petersi) and the common impala (A. m. melampus) in Etosha National Park, Namibia

There are two recognized subspecies of impala in sub-Saharan Africa: the common impala (Aepyceros melampus melampus) -- widespread in southern and east Africa -- and the vulnerable black-faced impala (A. m. petersi) -- found naturally in only a small enclave in southwest Africa. The Etosha National Park (NP) in Namibia harbours the largest and only protected-area population of black-faced impala, numbering some 1500 individuals. Due to translocations of the exotic common impala to commercial farms in Namibia during the past decades, the black-faced impala in Etosha is faced with the potentially serious threat of hybridization posed by secondary contact with the common impala inhabiting bordering farms. Using eight microsatellite DNA markers, we analysed 127 black-faced impala individuals from the five subpopulations in Etosha NP, to determine the degree, if any, of hybridization within the park. We found that (a) the black-faced impala were highly genetically differentiated from the common impala (pairwise theta-values ranged from 0.18 to 0.39 between subspecies; overall value = 0.27) and (b) black-faced samples showed high levels of genetic variability [average expected heterozygosity (H(E)) = 0.61 +/- 0.01 SE], although not as high as that observed in the common impala (average H(E) = 0.69 +/- 0.02 SE). (c) No hybridization between the subspecies in Etosha was suggested. A Bayesian Markov Chain Monte Carlo approach revealed clear distinction of individuals into groups according to their subspecies of origin, with a zero level of 'genetic admixture' among subspecies.     

The genetic status of naturally occurring black-nosed impala from northern South Africa

The impala (Aepyceros melampus ssp.) is a widespread antelope species occurring in sub-Saharan Africa. The two recognized subspecies have non-overlapping distribution ranges, with no known natural mixture of these subspecies until human interference. A number of common impala individuals (A. m. melampus) displaying phenotypic characteristics commonly observed in the black-faced impala (A. m. petersi), namely black facial markings, were seen on a farm in the Limpopo Province, South Africa. This farm falls outside the natural distribution range of A. m. petersi. We therefore aimed to identify the taxonomic placement of these individuals (i.e. A. m. melampus or A. m. petersi) through phylogenetic and molecular clock analyses using D-loop and cytochrome subunit b sequence data. Our results showed that these black-nosed impala from Limpopo are in fact A. m. melampus individuals. The existence of the black-nose phenotype in common impala could be more widespread than previously estimated. The occurrence of introgression between the two subspecies in this region could, however, not be fully excluded, and can only be fully assessed through the use of nuclear DNA analysis.     

Integrative taxonomy of a poorly known Sahelian rodent, Gerbillus nancillus (Muridae,Gerbillinae)

Aridification processes that affected the Sahelian area of West Africa during the last decades have induced significant changes in plant and animal communities of this region. In rodents, the genus Gerbillus characteristic of North African and Asian arid habitats has been affected by this climatic and environmental trends. Several species of this genus showed a southward range expansion in recent years into the Sahelian bioclimatic zone. Recent sampling in several localities of West Africa (Mali, Niger and Senegal) enabled us to collect numerous specimens of small gerbils. An integrative study of these samples using molecular, morphological and cytogenetical methods revealed that many of them were attributable to Gerbillus nancillus, a secretive and poorly known species. Gerbillus nancillus appears characterized by a well differentiated karyotype with 2n = 56 chromosomes, and to represent a unique genetic lineage within this genus. Body and skull measurements of G. nancillus were compared with those of the morphologically similar Gerbillus henleyi, which provided diagnostic clues between them. These new data significantly expand the distribution area of G. nancillus, which now ranges from Sudan in the East to Senegal in the West. G. nancillus is here reported from numerous new localities in Niger and Mali, and for the first time in Senegal, which raises questions about the origin of its presence and the colonization routes it followed to get there. We also show that G. henleyi and G. nancillus are sympatric and apparently often syntopic in the sub-Saharan part of the distribution of G. henleyi.     

Modelling the winter distribution of a rare and endangered migrant, the Aquatic Warbler Acrocephalus paludicola

The Aquatic Warbler Acrocephalus paludicola is one of the most threatened Western Palearctic passerine species, classified as globally Vulnerable. With its breeding grounds relatively secure, a clear need remains for the monitoring and protection of the migration and wintering grounds of this rare and endangered migrant. Recent research has shown that the Aquatic Warbler migrates through northwest Africa in autumn and spring. The wintering grounds are apparently limited to wetlands of sub-Saharan West Africa, with records from only about 20 localities in Mauritania, Mali, Senegal and Ghana. Given the lack of knowledge of its whereabouts, we decided to use the available data to predict the wintering distribution of the Aquatic Warbler with the help of Geographic Information Systems (GIS). We used a novel approach to model the distribution of rarely recorded species, which is based on a combination of presence-only and presence–absence modelling techniques. Using the program BIOMOD, we thus generated four progressively more conservative predictions of where the Aquatic Warbler overwinters in Africa. Whereas the most permissive model predicts the Aquatic Warbler to be found in a latitudinal band stretching from the Senegal river delta all the way to the Red Sea coast, the most restrictive model suggests a much smaller area concentrated within the regions around the Senegal river delta in northern Senegal and southern Mauritania and around the Niger inundation zone in southern Mali and eastern Burkina Faso. Such model predictions may be useful guidelines to focus further field research on the Aquatic Warbler. Given the excellent model predictions in this study, this novel technique may prove useful to model the distribution of other rare and endangered species, thus providing a means to guide future survey efforts.     

Phylogeography of a Sahelian rodent species Mastomys huberti: a Plio-Pleistocene story of emergence and colonization of humid habitats

The multimammate rat Mastomys huberti is a Sahelian species restricted to West Africa. Throughout its distribution area, the species is associated with humid habitats, flood plains and ponds, which make its current distribution highly fragmented. Knowing that humid and dry climatic phases regularly alternated along the Quaternary in West Africa, it can be postulated that the evolutionary history of the species and its genetic variation largely reflect these climatic oscillations. We used mitochondrial cytochrome b sequences to investigate the phylogenetic relationships of M. huberti populations across the totality of the species' geographical range (Mali, Senegal, Guinea and Mauritania). We found that cytochrome b sequence variation is partitioned into four divergent clades (mean Kimura 2-parameter genetic distances varying from 0.57 to 3.08%) corresponding to distinct geographical regions. We dated the separation events of these clades between 0.93 and 0.17 million years ago, suggesting that M. huberti history was strongly influenced by the Quaternary climatic variations and related hydrographic network changes. Relationships between lineages and the partitioning of genetic diversity suggest the occurrence of two refuges along the Atlantic coast during arid periods. Moreover, the species' current range results from a stepwise colonization from west to east. M. huberti colonized recently the Inner Delta of Niger River in Mali, probably during a humid episode some 0.6 million years ago. Demographically stable and highly diversified populations were found in South Senegal and Guinea while populations in North Senegal and in Mali experienced low numbers followed by a demographic expansion during the African Humid Period (c. 14 800-5500 bp). During the last arid period (c. 23 000-18 000 years ago), Malian populations found refuge in the northern parts of the Inner Delta of the Niger River, then expended to the southern parts of the delta and along the course of the Niger River downstream Tombouctou. More recently, M. huberti would have rapidly expanded into irrigated areas along the Senegal River and along the Canal du Sahel, Mali, reflecting the invasive and the pest character of this species.     

NOTES ON BIRDS IN THE GAMBIA

Recent observations in The Gambia have shown that the status of many species has changed in the last forty or fifty years and have provided data on the local breeding seasons for a number of birds. Several species have been found for the first time in this part of West Africa. The various birds concerned are given in a systematic list, together with notes on all the Palaearctic migrants so far recorded from The Gambia. Organized research is recommended on several lines: on the sequence of food sources, especially through the long and severe dry season, when Palaearctic birds are added to resident and when some African species breed. The bird ecology of the mangroves remains to be worked out, and also the relative importance to birds of cleared ground and untouched "bush" at all seasons.     

Lichens from gambia,with a new black-fruiting isidiate caloplaca on savannah trees

Twenty-five lichen species are reported from Gambia. The corticolous isidiate Caloplaca gambiensis is described as new to science. It is characterized by a blackish, isidiate thallus and brown to black apothecia. It occurs on exposed trees in savannah area, where the lichen flora is dominated by Physciaceae. All 27 species mentioned are new records for Gambia; Trypethelium nigroporum is also new to Africa.     

Progress in controlling the reinvasion of windborne vectors into the western area of the Onchocerciasis Control Programme in West Africa

Since vector control began in 1975, waves of Simulium sirbanum and S. damnosum s.str., the principal vectors of severe blinding onchocerciasis in the West African savannas, have reinvaded treated rivers inside the original boundaries of the Onchocerciasis Control Programme in West Africa. Larviciding of potential source breeding sites has shown that these 'savanna' species are capable of travelling and carrying Onchocerca infection for at least 500 km northeastwards with the monsoon winds in the early rainy season. Vector control has, therefore, been extended progressively westwards. In 1984 the Programme embarked on a major western extension into Guinea, Sierra Leone, western Mali, Senegal and Guinea-Bissau. The transmission resulting from the reinvasion of northern C?te d'Ivoire and Burkina Faso has been reduced by over 95%, but eastern Mali has proved more difficult to protect because of sources in both Guinea and Sierra Leone. Rivers in Sierra Leone were treated for the first time in 1989 and biting and transmission rates in Sierra Leone and Guinea fell by over 90%. Because of treatment problems in some complex rapids and mountainous areas, flies still reinvaded Mali, though biting rates were approximately 70% lower than those recorded before anti-reinvasion treatments started. It was concluded that transmission in eastern Mali has now been reduced to the levels required to control onchocerciasis.     

Flexibility in the timing of post-nuptial moult among Red-billed Queleas Quelea quelea in Botswana in relation to the timing of breeding

The timing of primary moult of adult Red-billed Queleas Quelea quelea, captured as they were completing an unusually late breeding attempt at Francistown, northern Botswana, in June 2004, was compared with the timing of moult of birds breeding earlier in the season in north-west Botswana during two earlier years, 1971 and 1972. Differences between years in the dates when local colonies finished breeding (mid-March to late June) and between two localities in the same year (mid-March and late May) were matched by corresponding differences in the estimated dates of moult onset, ranging from mid-April to mid-June. Flexibility in the timing of moult among Red-billed Queleas in southern Africa evidently enables birds to take advantage of unusually late breeding opportunities by delaying moult onset and overlapping moult and breeding at the end of the nesting cycle. Such flexibility may also include moult interruption to permit late breeding, although its incidence in southern Africa is apparently low.     

Genetic differentiation between Príncipe Island and mainland populations of the grey parrot (Psittacus erithacus), and implications for conservation

The range of the grey parrot (Psittacus erithacus), one of the most heavily harvested bird species for the international pet trade, spans the forest belt of Central and West Africa and includes the oceanic island of Príncipe (Gulf of Guinea). Morphological variation led to the recognition of two mainland subspecies (P. e. erithacus and P. e. timneh). The population from Príncipe was originally described as a separate species (P. princeps) but is currently included in the nominate race. We used 1932 bp of the mitochondrial genome to clarify the genealogical affinities between the two currently-recognized mainland subspecies and the Príncipe population. Sampling included 20 individuals from Príncipe, 17 from P. e. erithacus, and 13 from P. e. timneh. We found that the two mainland subspecies form two independent lineages, having diverged up to 2.4 million years ago (Ma), and that the Príncipe population is composed of two lineages that diverged in allopatry. The most common lineage is descended from the first colonizers and evolved in isolation for up to 1.4 Ma. Contrary to current understanding, this 'Príncipe lineage' is more closely related to the timneh than to the erithacus subspecies. The second lineage consists of P. e. erithacus birds from the nearby mainland that colonized the island in recent times. The evolutionary dynamics of the grey parrot population of Príncipe are primarily characterized by isolation, with new genetic variation being added through rare immigration events. The heavily harvested Príncipe grey parrot population should therefore be treated as an independent conservation unit.     

DISTRIBUTION,POPULATION SIZE AND CONSERVATION OF THE SWIFT TERN STERNA BERGII IN SOUTHERN AFRICA

Cooper, J., Crawford, R. J. M., Suter, W. & Williams, A. J. 1990. Distribution, population size and conservation of the Swift Tern Sterna bergü in southern Africa. Ostrich 61: 56–65.

The Swift Tern Srerna bergü occurs commonly in coastal southern Africa, with a nonbreeding distribution extending the length of the southern African coast and into southern Angola. The known nonbreeding distribubon of the nominate subspecies S. b. bergü extends from Swakomund, Namibia to Kosi Bay, Natal, South Africa. In Natal its nonbreeding distribution overlaps with that of the subspecies S. b. enigma. The species very rarely occurs inland or far out to sea. The geedin distribution of tre nominate subspecies extends from Swakopmund to Algoa Bay, eastern Cape, South Afcnca.

Twenty-two breeding localities are known in southern Africa, but usually only six to seven are occupied. in any one year. Most breeding localities are marine islands where Swift Terns often breed in muted colonies with Hartlaub's Gulls Lorus hartloubii. In 1984 a complete breeding ansus estimated a breeding population of 4835 pairs. However, 6088 pairs were counted at only three localities in 1988. The size of the annual breeding population varies by a factor of as much as 1,6; although the overall size of the adult population is thought to be reasonably stable with no temporal trends evident. Thirteen breeding localities which are legally proclaimed nature reserves supported 72% of the 1984 breeding population. Existing and perceived threats to the Swift Tern are discussed in detail. To improve further tRe conservation status of the Swift Tern in southern Africa, it is recommended that: unprotected breeding localities be proclaimed reserves, also protecting those not on islands with adequate fences; feral cats be removed from breeding islands where they are present; and fisherman be educated to release entangled terns and not to discard lines and nets.     

An assessment of West African seahorses in fisheries catch and trade

This study provides the first assessment of a heavily traded West African seahorse species, Hippocampus algiricus, and the first information on short‐snouted seahorse Hippocampus hippocampus biology in Africa. A total of 219 seahorses were sampled from fisher catch in Senegal and The Gambia, with estimated height at reproductive activity for H. algiricus (161 mm) larger than mean ± s.d . catch height (150 ± 31 mm). Catch composition, height at reproductive activity and potential biases in fishery retention are discussed with regard to the current Convention on International Trade of Endangered Species (CITES) guidelines.     

High variation reduces the value of feather stable isotope ratios in identifying new wintering areas for aquatic warblers Acrocephalus paludicola in West Africa

Stable isotope analysis of feathers can be useful in the study of seasonal interactions and migratory connectivity in birds. For the Palaearctic–African migration system, however, the lack of isotope data from feathers of known origin in Africa renders the geographic assignment of birds captured on European breeding grounds to potential wintering areas problematic. Rectrices of the threatened aquatic warbler Acrocephalus paludicola grown in Africa were sampled across six European countries to assess whether birds in different breeding populations shared similar isotopic signatures and so were likely to have wintered in the same region in Africa. Freshly grown feathers of aquatic warblers collected at the only known wintering site in Senegal showed high variation in carbon, nitrogen, and hydrogen isotope ratios. Due to similarly high variation in isotope ratios of African‐grown feathers within all breeding populations, it was not possible to determine whether different populations wintered in different regions. However, isotope signatures of 20% of birds captured on European breeding grounds fell outside the range of those captured in Senegal, suggesting a wider wintering distribution than is currently known. We therefore assessed whether the origin of these feathers could be estimated by trying to establish isotopic gradients across sub‐Saharan West Africa. Feathers of three ecologically similar surrogate species were sampled from wetlands across a 3000 km east‐west and a 2000 km north–south transect. Within‐site variation in feather isotope ratios was frequently larger than the difference predicted by gradients across West Africa. Thus, predicting the origin of individual feathers using single‐isotope gradients was not reliable. The large within‐site variability of feather isotope ratios of a habitat specialist species like the aquatic warbler indicates that using feather isotope ratios will require large sample sizes from many locations, and may thus not be an efficient tool in identifying wintering areas of Palaearctic–African migrants.     

Patterns of stable isotope signatures in willow warbler Phylloscopus trochilus feathers collected in Africa

We conducted stable isotope analyses of nitrogen and carbon on feathers obtained from willow warblers in Africa to find an explanation for a previously observed pattern of different δ¹⁵N and δ¹³C values across a migratory divide in central Scandinavia. A new data set confirms that north Scandinavian birds of the subspecies P. t. acredula have higher δ¹⁵N values than south Scandinavian birds of the subspecies P. t. trochilus . In Africa, we found significant differences for both δ¹⁵N and δ¹³C values among feathers collected from major geographical regions as well as between countries within regions. Isotope signatures of δ¹⁵N and δ¹³C in Scandinavian acredula matched well with those of willow warblers sampled in southern parts of Africa, but differed from samples obtained in East and West Africa. Isotope signatures in Scandinavian trochilus did not agree with the pattern in any of the three African regions (West, East or South). However, a more detailed analysis of the isotopic data in feathers from countries within West Africa, which is the wintering region of Swedish trochilus based on ringing recoveries, revealed a correspondence with samples from Liberia, the Ivory Coast and Nigeria.     

3. NOTES ON THE BIRDS AROUND RICHARDS BAY—ZULULAND

Clancey, P. A. 1982. The Little Tern in Southern Africa. Ostrich 53:102-106

Since the latter part of last century two subspecies of the wide ranging Little Tern Sterna albifrons have been listed as wintering in the Afrotropics as far south as the Cape and Natal respectively, these being the nominate race and S. a. snundersi. A re-examination of material shows that in southern Africa only the nominate race occurs and that the alleged records of saundersi are based on misidentifications. S. a. albifrons has been recorded as far north as Kenya. The form occurring in Madagascar and Mauritius will probably prove to be the last-named subspecies. The three races occurring in the Afrotropics are redescribed and it is suggested that the presently understood nominate race is composite.