Cytological observations on the interaction between two inversions responsible for position-effect variegation in Drosophila melanogaster

The strain of Drosophila melanogaster In (1)m ^k ; In (2LR) Rev ^B shows more miniature variegation than the strain In(1)m ^K and less Revolute variegation than the strain In(2LR)Rev ^B . Observations on heterochromatisation in the larval salivary gland chromosomes of the three strains revealed that the m ^k chromosome is heterochromatised in a higher proportion of nuclei and the Rev ^B chromosome is heterochromatised in a lower proportion of nuclei in the double-inversion strain than in the corresponding single-inversion strain. Single-and double-inversion strains did not however differ in the mean number of bands heterochromatised per affected chromosome. The difference between incidence and extent of heterochromatisation was further exposed by comparisons between and within strains: the incidence of heterochromatisation in different chromosome regions within a nucleus was positively correlated, but a significant positive correlation was found in only one of the eight possible comparisons between extents of heterochromatisation in different chromosome regions in a given nucleus, two of the comparisons showing significantly negative correlations. The results in general are compatible with the view that the initiation and progression of heterochromatisation are distinct phenomena, under separate control.     

Isolation of telotertiary compensating trisomics from telocentric translocation trisomics and telo-substituted translocation heterozygotes of rye (Secale cereale L.)

Telotertiary compensating trisomics (CTs) of rye (Secale cereale L.), in which the absence of one normal chromosome is compensated by the presence of a telocentric and a translocation chromosome, were isolated in progenies of telocentric translocation trisomics, and telo-substituted translocation heterozygotes, respectively. These two sources were obtained from crosses between five interchanges of the Wageningen translocation tester set, and telocentric normal trisomics (for IRS, IRL and 5RS), or telocentric substitutions (for IR and 3R), respectively. In test crosses with normal male plants, CTs were identified using either critical meiotic configurations, the segregation of karyotypes in selfed trisomic progenies, or the segregation of a marker located on the compensated chromosome. CT yields ranged from 0.0–6.3%. These frequencies were concluded to be determined mainly by the frequency of the exchanged segment of the translocation chromosome involved in the CT complex being associated at first meiotic metaphase (MI) in the source plants. The lower association frequencies result in the higher CT yields. The correlation between high association frequency of this segment and low CT yield suggests that infrequent adjacent orientation of one critical segment is also responsible for the origin of CTs. This agrees with cytogenetic theory.     

Fragment responsible for translocation in the N-terminal domain of human topoisomerase I

The N-terminal domain is a fragment that binds proteins and anchors topoisomerase I in the nucleolus. As a separate polypeptide, it translocates from the nucleolus to nucleoplasm upon camptothecin treatment. In this paper, we show that the translocation depends on the short fragment of the domain (residues from 1 to 67). We also present a list of proteins that specifically bind to the fragment responsible for translocation.     

Activation tagging identifies a gene from Petunia hybrida responsible for the production of active cytokinins in plants

Cytokinins (CKs) are phytohormones that play an important role in plant growth and development. Although the first naturally produced CK, zeatin, was isolated almost four decades ago, no endogenous gene has been shown to produce active CKs in planta. In an activation tagging experiment we have identified a petunia line that showed CK-specific effects including enhanced shooting, reduced apical dominance and delayed senescence and flowering. This phenotype correlated with the enhanced expression of a gene we labelled Sho (Shooting). Sho, which encodes a protein with homology to isopentenyl transferases (IPTs), also causes CK-specific effects when expressed in other plant species. In contrast to the ipt gene from Agrobacterium, which primarily increases zeatin levels, Sho expression in petunia and tobacco especially enhances the levels of certain N6-(delta2-isopentenyl) adenosine (2iP) derivatives. Our data suggest that Sho encodes a plant enzyme whose activity is sufficient to produce active CKs in plants.     

TatC-dependent translocation of pyoverdine is responsible for the microbial growth suppression

Infections are often not caused by a colonization of Pseudomonas aeruginosa alone but by a consortium of other bacteria. Little is known about the impact of P. aeruginosa on the growth of other bacteria upon coinfection. Here, cellree culture supernatants obtained from P. aeruginosa suppressed the growth of a number of bacterial strains such as Corynebacterium glutamicum, Bacillus subtilis, Staphylococcus aureus, and Agrobacterium tumefaciens, but had little effect on the growth of Escherichia coli and Salmonella Typhimurium. The growth suppression effect was obvious when P. aeruginosa was cultivated in M9 minimal media, and the suppression was not due to pyocyanin, a well-known antimicrobial toxin secreted by P. aeruginosa. By performing transposon mutagenesis, PA5070 encoding TatC was identified, and the culture supernatant of its mutant did not suppress the growth. HPLC analysis of supernatants showed that pyoverdine was a secondary metabolite present in culture supernatants of the wild-type strain, but not in those of the PA5070 mutant. Supplementation of FeCl₂ as a source of iron compromised the growth suppression effect of supernatants and also recovered biofilm formation of S. aureus, indicating that pyoverdine-mediated iron acquisition is responsible for the growth suppression. Thus, this study provides the action of TatC-dependent pyoverdine translocation for the growth suppression of other bacteria, and it might aid understanding of the impact of P. aeruginosa in the complex community of bacterial species upon coinfection.     

Homologous recombination involving cox2 is responsible for a mutation in the CMS-specific mitochondrial locus of Petunia

We have characterized the only mutation detected so far in S-Pcf, the mitochondrial cytoplasmic male sterility (CMS)-specific locus of petunia. This locus consists of three open reading frames (ORFs): the first contains part of atp9, an intron-less cox2 pseudogene (which does not contain the original cox2 ATG) and the unidentified reading frame urf-s; the second and third ORFs correspond to the only copies of nad3 and rps12 genes in the genome, respectively. In the cell line R13-138, which was generated from a male-sterile somatic hybrid (line SH13-138), a change in the first ORF of the S-Pcf locus has been characterized: the atp9 sequence has been lost, while exon1 of the normal copy of the cox2 gene (including the original ATG sequence) and the adjacent 5′ sequence of the petunia recombination repeat, have been introduced. The data suggest that this reorganization of mtDNA is the consequence of a homologous recombination event involving part of the cox2 coding region, and that the cox2 coding region may serve as an active site for inter- or intra-mtDNA homologous recombination. The results further suggest that in line SH13-138 (or during its maintenance in tissue culture), segregation of the S-Pcf-containing mtDNA molecules has occurred, and the mutant mtDNA is now predominant in the population.     

A model for estimating the extent of variegation in mosaic tissues

A method is described which allows the size of patches of like cells in mosaic tissues to be estimated from the frequency with which small samples taken from the tissue contain both of the mosaic cell types. The mosaic patches are represented as close-packed geometric figures arranged in twoor three-dimensional tissues. Small samples drawn at random from these tissues will include portions of one or more patches; only those samples which include portions of two or more dissimilar patches (mixed samples) will contain both cell types. The expected frequency of mixed samples is calculated as a function of the shape of the mosaic patches, the frequency of the two mosaic cell types and the sample to patch size ratio. This expected frequency is not strongly dependent on patch shape for triangular, square and hexagonal patches in two dimensions or for cubic and orthotetrakaidekahedral patches in three dimensions. Elongation of square patches along one axis or of cubic patches along one or two axes results in slight increases in the expected frequency of mixed samples for given sample to patch size ratio.     

Evidence for transposition in Petunia

Summary In Petunia interaction is described between a trans-regulatory genetic element Bi and responsive anthocyanin alleles, resulting in a variegated flower colour pattern. Crosses segregated white-flowering plants that had lost the Bi element and could be shown to contain a responsive allele by the colour pattern resulting from interaction with the standard variegated parent. A weak mutant of the Bi element is described. Some pure lines of Petunia contained the Bi element, others did not. In two lines it could be mapped to chromosome I.     

A model system for comparative research: Petunia

Research today aims to analyse the development of plant processes over evolutionary time. To obtain a representative view, a range of plant species covering at least the crucial nodes in phylogeny must be selected for an in depth analysis. Here we present Petunia as one of the available systems: as a representative of the Solanaceae it has the advantages of good culture conditions and the availability of a range of materials, techniques and strategies that can be used to research an interesting and diverse set of questions.     

On the origin of telocentric chromosomes in mammals

The origin of mammalian telocentric chromosomes is considered under the classical (fusion) and fission hypotheses using both theoretical analyses of the mechanisms proposed under the two hypotheses, and the published chromosomal data for 723 mammal species. Telocentrics are defined on the basis of short arm size (S_w) as chromosomes with S_w < 0·1(Imai, 1976). The fusion hypothesis lacks adequate models for producing these telocentrics, but their origin is readily understood under the fission hypothesis. Based on these analyses, I propose a cyclical model of chromosome change, symbolized:

in which T, A, and $\text{M}$ are, respectively, telocentric, acrocentric, and meta-, submeta- and subtelocentric chromosomes. The chief elements of this model are centric fission $\text{(}\text{M}\text{→ T + T)}$, tandem growth of constitutive heterochromatin (T → A), and pericentric inversion $\text{(A →}\text{M}\text{)}$. Under this model, therefore, mammalian karyotypes have an overall tendency, with occasional reversals, to evolve higher numbers of both chromosomes and chromosome arms.     

Conformational change of 23S RNA in 50S ribosome is responsible for translocation in protein synthesis

Since the recognition of the ‘translocation’ phenomenon during protein synthesis several theories have been proposed, without much success, to explain the translocation of peptidyl tRNA from the aminoacyl site to the peptidyl site. The involvement of L7/L12 proteins and therefore the L7/L12 stalk region of 50S ribosomes in the translocation process has been widely accepted. The mobility of the stalk region, as recognised by many workers, must be of physiological significance. It has recently been shown in this laboratory that 50S ribosomes derived from tight and loose couple 70S ribosomes differ markedly in quite a few physical and biological properties and it appears that these differences are due to the different conformations of 23S RNAs. It has also been possible to interconvert tight and loose couple 50S ribosomes with the help of the agents, elongation factor -G, GTP (and its analogues) which are responsible for translocation. Thus loose couple 70S ribosomes so long thought to be inactive ribosomes are actually products of translocation. Further, the conformational change of 23S RNA appears to be responsible for the interconversion of tight and loose couple 50S ribosomes and thus the process of translocation. A model has been proposed for translocation on the basis of the direct experimental evidences obtained in this laboratory.     

Position effect variegation in yeast

Classically, position effect variegation has been studied in Drosophila and results when a euchromatic gene is placed adjacent to either centromeric heterochromatin or to a telomeric domain. In such a circumstance expression of the locus variegates, being active in some cells and silent in others. Over the last few years a comparable phenomenon in yeast has been discovered. This system promises to tell us much about this curious behaviour. Indeed, experiments reported recently⁽¹⁾ indicate that the variegation of a yeast telomeric gene is cell-cycle regulated. The results suggest the following model. During DNA replication there is a disassembly of chromatin that allows a competition between silencing factors and trans-activators to take place. Thus, reassembly of the domain may result in either the repression or the expression of the affected gene and, hence, produce a variegating phenotype.     

On variegation in Primula sinensis

Ohne Zusammenfassung     

PE is a functional domain responsible for protein translocation and localization on mycobacterial cell wall

The PE family of Mycobacterium tuberculosis includes 98 proteins which share a highly homologous N-terminus sequence of about 110 amino acids (PE domain). Depending on the C-terminal domain, the PE family can be divided in three subfamilies, the largest of which is the PE_PGRS with 61 members. In this study, we determined the cellular localization of three PE proteins by cell fractionation and immunoelectron microscopy by expressing chimeric epitope-tagged recombinant proteins in Mycobacterium smegmatis. We demonstrate that the PE domain of PE_PGRS33 and PE11 (a protein constituted by the only PE domain) contains the information necessary for cell wall localization, and that they can be used as N-terminal fusion partners to deliver a sufficiently long C-terminus-linked protein domain on the mycobacterial cell surface. Indeed, we demonstrate that PE_PGRS33 and Rv3097c (a lipase belonging to the PE family) are surface exposed and localize in the mycobacterial cell wall. Moreover, we found that PE_PGRS33 is easily extractable by detergents suggesting its localization in the mycobacterial outer membrane. Beyond defining the cellular localization of these proteins, and a function for their PE domains, these data open the interesting possibility to construct recombinant mycobacteria expressing heterologous antigens on their surface for vaccine purposes.