From Ethnobiology to Ecotoxicology: Fishers’ Knowledge on Trophic Levels as Indicator of Bioaccumulation in Tropical Marine and Freshwater Fishes

Information on fish trophic levels is important to assess fishing impacts and to better understand the bioaccumulation of pollutants within aquatic food chains. The local ecological knowledge held by small-scale fishers can fill knowledge gaps in fish trophic ecology. We estimated the trophic levels of 69 tropical and subtropical fish species (33 coastal and 36 freshwater species) using data on fish diets from the literature and obtained from interviews with Brazilian fishers. The fish trophic levels estimated from fishers’ knowledge were positively correlated with the trophic levels estimated using data from biological studies for both coastal and freshwater fish. The fishers’ knowledge also indicated bioaccumulation patterns, as the fish trophic levels estimated from fishers’ knowledge were positively related to the mercury (Hg) content in fish muscle (wet weight, from literature data) in 41 fish species (15 coastal and 26 freshwater). These findings reveal the potential for new applications of fishers’ knowledge to ecotoxicology, which could improve management of aquatic ecosystems and strengthen fishers’ political status.     

Feeding ecology of fish in a coastal river of the Atlantic Rain Forest

Feeding ecology of fish assemblage in a costal river of the Atlantic Rain Forest in Southern Brazil was investigated. Monthly samples using different fishing techniques were completed on a section of the river characterized as a freshwater environment, and an adjacent tide-influenced estuarine section. Species were grouped into three major Feeding Mode Functional Groups: Zoobenthivore, Omnivore and Detritivore. The river section with the greatest occurrence was the site where the most abundant species are likely to feed most intensively. Freshwater strangler species (Cyphocharax santacatarinae - detritivorous, Rhamdia quelen and Oligosarcus hepsetus - zoobenthivorous) presented higher stomach repletion in the freshwater environment while marine migrants (Genidens genidens and Etropus crossotus - zoobenthivorous) and estuarine residents (Bairdiella ronchus - zoobenthivorous) presented higher repletion in the tide-influenced estuarine stretch. Use of food resources was influenced by spatial and temporal variations linked to environmental characteristics such as salinity, habitat heterogeneity, life history evolution, feeding specialization and resource partitioning. Hypotheses concerning potential keystone species, ecosystem engineers or strong interactors were also discussed.     

Spatial and seasonal patterns in freshwater ichthyofaunal communities of a tropical high island in Fiji

We surveyed freshwater ichthyofaunal communities in streams of Vanua Levu, Fiji, under a range of land cover to assess differential, seasonal effects on fish abundance and diversity. We collected fish from 32 families, 19 genera and 87 species, representing approximately 50% of the known Fijian freshwater and estuarine fish fauna. Position in reach was the strongest overall factor influencing fish abundance and diversity, particularly in the larger, steeper catchments. However, fish communities exhibited strong seasonal specificity with over half (55%) of species observed in only one season. There were greater numbers of estuarine and marine migrants and fishes with poor swimming ability in the dry season, with more schooling species, large predators and fish that prefer muddy benthos in the wet. In the more pristine catchments of Kubulau District, higher species abundance and diversity were observed in the wet season and were associated with significantly greater flow, pH and dissolved oxygen. We observed the opposite pattern for fish diversity and abundance from the more degraded catchments of Macuata Province. These results suggest that the wet season is having a net positive effect on habitable space for fishes in Kubulau and a net negative effect in Macuata, as species may be lost due to increased runoff from heavily cleared and cultivated catchments. Integrated water resource management across the full range of habitats utilized by Fiji’s freshwater fishes is recommended in order to maintain species diversity and abundance.     

River flow influence on the fish community of the Tagus estuary (Portugal)

The influence of river flow on the fish community was assessed for the Tagus estuary (Portugal), based on sampling surveys carried out between 1979 and 2002. Four estuarine areas were sampled using similar fishing gear and effort in all the years considered in this study (1978–1980; 1995–1997; and 2001–2002). According to river freshwater flow values, sampling years were classified as wet (mean value of 714 m³ s⁻¹, sd = 110 m³ s⁻¹) or dry (mean value of 164 m³ s⁻¹, sd = 19m³ s⁻¹). Species richness varied between 22 and 39 according to the year, but no significant differences were related to river flow. The number of species per ecological guild was also similar in wet and dry years. Fish assemblage was dominated by marine occasional, estuarine resident and marine-estuarine opportunist species that represented near 90% of all fish species. The highest densities were represented by estuarine resident species. Fish density in dry and wet years differed significantly (mean density of 10.51 individuals 1,000 m⁻² and 3.62 individuals 1,000 m⁻², respectively), and the major differences were registered for estuarine resident, marine-estuarine opportunist and catadromous species. These differences probably reflected the estuarine habitat availability and also differences in fish densities in some estuarine areas under different flow conditions. The multivariate ordination analyses performed outlined both seasonal and spatial variation trends in fish distribution and abundance. The estuarine longitudinal gradient and its relationship with species distribution were less evident in dry years. Relationships between species abundance and river flow were different according to species, which is probably due to different needs in the timing and magnitude of river flow. Electronic supplementary material  The online version of this article (doi: ) contains supplementary material, which is available to authorized users.     

Movements of undersized spotted grunter (<Emphasis Type="Italic">Pomadasys commersonnii</Emphasis>) in the Great Fish Estuary,South Africa: implications for fisheries management

The purpose of this study was to test the hypothesis that an estuarine species as the spotted grunter Pomadasys commersonnii is evenly distributed within the estuary and uniformly exploited by different groups of fishers. This was done by investigating the movements and area use of spotted grunter in relation to the fisheries. The position of 20 acoustically tagged fish was recorded during 36 days in February and March 2003, by manual tracking and automated data logging receivers. Information on the fisheries in the estuary was collected through visual registration of fishing effort and interviews. The spotted grunter moved on average 1.0 km (SD ± 0.7) between positional fixes. Most of the fish were positioned in the lower part of the 12 km long estuary, as 70% of the positional fixes were within the first 3 km, and 89% within the first 6 km. Approximately half (49%) of all the fixes were between 1.0 and 1.5 km from the estuary mouth. The spotted grunter used on average 4.9 km (SD ± 4.9) of the length of the estuary, and there was no significant relationship between the length of the estuary used and the body length of the fish (26–39 cm TL). Subsistence fishers accounted for 73% of fishing lines in the water, while recreational fishers accounted for the rest. Ninety-three percent of the lines were recorded within the first 6 km from the estuary mouth, of which 80% were recorded within the first 3 km. Almost 1/3 of the fishing effort was recorded between 1.0 and 1.5 km from the mouth. The hypothesis that the estuarine dependent species spotted grunter was evenly distributed within the estuary was rejected. However, there was a significant relationship between the distribution of the fishing effort of the subsistence fishers and the fish, indicating that the spotted grunter was uniformly exploited within the estuary by this group of fishers. In contrast, there was no relationship between the distribution of fish and recreational anglers.     

Environmental variability and the fishery dynamics of the Okavango delta, Botswana: the case of subsistence fishing

The hydrological regime of the Okavango River Basin is the main driver of ecological change in the delta. The delta supports a small-scale fishery which is a source of livelihood for communities within its fringes. The fish resource is particularly important to subsistence fishers, who have limited access to socio-economic opportunities. However, fish availability is subject to 'concentration and dilution' effects because of the hydrological regime. As a copying strategy, fishers use a variety of fishing methods to effectively harvest the delta's fish community across all its trophic levels. This exploitation regime helps to maintain the delta's species diversity and only reduces fish biomass proportionally across the different trophical levels. Furthermore, fishers have developed different fish-processing techniques to preserve their harvest for low fishing season periods to cope with low food availability. The aim of this paper therefore, was to explore spatio-temporal variations in fish availability and to show how the delta's subsistence fishers cope with this dynamicity.     

Gear type,species composition and economic value of fisheries in the mangroves of Pak Phanang,Thailand

Fishing gear and methods, catch composition, annual catch numbers and the monetary value of fisheries based in the mangroves of Pak Phanang, Nakhon Si Thamarat province, Thailand, were studied from September 2004 to February 2005. The fishing gear and methods were surveyed by visual observation and interviews. Sample catches were taken for each type of fishing gear and method. Semi-closed questionnaire surveys were conducted among fishers, local traders, local administrative officers and related organizations to derive information on utilized species, gear and methods, fisher and fishery status, and trading and catch price. The Pak Phanang mangrove fishery has three types of multi-species capture gear: channel traps, gill nets and lift nets. It also has three kinds of single-species (group) gear/methods: crab traps, catfish hooks and hand capture using a long tail fishing boat. A total of 57 fish species in 27 families, and 23 shell fish species in 8 families were recorded from the catch samples. Penaeid shrimp (25%), and ambassid (31%) and mugilid (24%) fishes were the abundant groups in the channel traps, while ariid (36%) and mugilid (19%) fishes were abundant in the lift net catches. Ambassid (42%) fish dominated the gill net catches. Species richness (number of species) varied depending on sampling month and type of fishing gear. The total annual catch and its monetary value were estimated to be 442–551 tons and US $368,038–733,973, respectively. The estimated annual catch per unit area of mangrove was 63–79 kg ha⁻¹, which generated a market value of US $368,038–733,973, respectively. The estimated annual catch per unit area of mangrove was 63–79 kg ha⁻¹, which generated a market value of US 52–105.     

Effects of water depth and livelihood activities on plant species composition and diversity in Nyando floodplain wetland,Kenya

The influence of water levels and livelihood activities on plant species composition, diversity and structuring of wetland ecosystem is a concern as wetlands undergo human exploitation and the increasing threat from climate change. To evaluate the effect of seasonal changes in water depth and human activities, plant density and species composition were assessed in wet and dry seasons and in natural and converted wetland zones of the Nyando papyrus wetland, Kenya. Three transects with different water regimes and livelihood activities were identified. Overall, 30 plant species were identified. In the less disturbed zone, differences between transects were small and 79 % (dry season) to 99 % (wet season) of the plant density consisted of obligate and facultative wetland plants. These groups were dominated by Cyperus papyrus and Vossia cuspidata. In the converted zone, facultative, facultative upland and upland plants became more important with 36 % of the plant density. The seasonally inundated zone had species diversity and species richness increased under dry conditions with more facultative upland species. In the converted zone, disturbance caused by vegetation removal, cropping and other livelihood activities lead to lower soil moisture and more colonization opportunity for facultative and upland species that are more adapted to dry conditions.     

Spatial and seasonal variations in fish assemblages of the Yangtze River estuary

This study aimed to test the hypothesis that biotic influences play a role in determining estuarine fish assemblages. Thus the mechanisms that regulate the observed spatial niche segregation between fish species with morphological and ecological similarities within estuaries were investigated. Fishes were sampled seasonally at 30 stations along an entire salinity gradient of the Yangtze River estuary from spring 2010 to winter 2011, using bottom trawling (10 mm mesh size in the cod end). A total of 62 species belonging to 28 families were collected. Marine migrants (21) and estuarine species (19) dominated the assemblage and accounted for the highest abundances (marine migrants = 42.5%, estuarine species = 38.3%), with the marine migrants having the highest biomass (57.2%). Canonical correspondence analyses indicated that chlorophyll a, salinity, temperature, and geographic distance were the four main variables influencing the occurrence of fishes within the system. A stable fish assemblage in the upper zone during the wet season (spring and summer) was more obvious than in the dry season. The Pianka index showed a clear spatial segregation in four pairs of tonguesoles species (Cygonobius), and in most pairs of gobiids (Gobiidae), and a high degree of overlapping (>0.60) in only four pairs of gobiid species during the wet season. However, according to the results of the null model the observed segregating or pattern sharing was not caused by interspecific competition.     

Characterization of the fishes and of subsistence fishing in the Pantanal of Mato Grosso, Brazil

Fishing is one of the oldest human activities in the Pantanal of Mato Grosso in Central Brazil. In the of Bento Gomes River Basin (Pantanal of Poconé) the presence of fishermen is very common. The objective of this study is to describe the fishing activity in the basin in view of the elaboration of proposals for the sustainable use of this natural resource. Of the 256 fishermen that were registered most are fishing for their subsistence (92%) and the rest (8%) are occasional fishermen (locally called "de lufada" fishermen). "Traíra" (Hoplias malabaricus) and "piranhas" (Serrasalmus marginatus, Serrasalmus spilopleura and Pygocentrus nattereri) were the species most frequently captured for human consumption. The fishing is more intensive during the ebb season and at the beginning of the drought season, when the waters begin to recede for the river channel, as the catch is facilitated by the concentration of fishes at the river margin. The fishermen and their families consume fish three to four times a week, twice a day. Fish meat is one of the only means of obtaining animal protein for dozens of poor families in the area. The number of fishermen, as well as the actual number of catches do not appear to compromise the natural fish stocks, although no specific capture criteria is obeyed by the fishing activity.     

The icthyofauna of the Mhlathuze coastal lakes: some preliminary results

The fish faunas of the four Mhlathuze coastal lakes and the lower river comprise a diverse assortment of over fifty marine, estuarine and freshwater species. Three freshwater species are endemic to KwaZulu-Natal and nine estuarine species are endemic to southern Africa. Five species are of conservation significance. Species numbers in Lakes Mzingazi and Cubhu are similar historically and both lakes served as secondary nursery habitats for estuarine associated fishes. This role has been impacted by the construction of weirs at their outlets which prevent successful recruitment of estuarine species, especially during drought years when lake water levels are low. The fish faunas of Lakes Nsezi and Mangeza are depauperate and lack marine or estuarine components. In order that these systems fulfil their potential function as secondary nursery habitats to many estuarine fish species, minimum lake water levels must be set to ensure sufficient outflows at proposed fish ladders during critical spawning and migration times.     

Preliminary analysis of the fish species of the Pacific Central American Mangrove of Zancudo, Golfo Dulce, Costa Rica

The aim of the present paper is to provide first information on the mangrove fish community of the tropical fjord-like Golfo Dulce (GD), to study its importance for fish diversity and fisheries in the area and to give preliminary results on its spatial–temporal variation. Eighty-two species belonging to 30 families were identified. More than half of them belonged to the estuarine transient fish group and only 14 species were estuarine resident, highlighting the importance of the Zancudo mangrove as a transition area. The most diverse families were Sciaenidae, Carangidae and Haemulidae for both rainy and dry seasons. As much as 71% of the species captured were of first or second grade economic value and only 11% had no commercial value. Comparing our data with fisheries and scientific surveys inside and outside the gulf suggests the importance of the Zancudo mangrove for regional fisheries and fish diversity. Multidimensional scaling (MDS) indicated gradual changes in the fish community composition from the river mouth to the more internal sampling sites for rainy and dry seasons. Moreover, shifts in abundance and species composition between seasons were observed, mainly an increase in the differences between the boundaries and the central zones of the mangrove. These changes were attributed to the higher salinity differences between sites during the dry season forcing the occasional visitor fish downstream and freshwater fish taxa upstream. While the results contribute to initiatives for participative fisheries management in the region, further studies are needed to analyse the variations in detail.     

Seasonal variations in growth, condition and gonads of Dormitator latifrons (Richardson) in the Chone River Basin, Ecuador

Growth in length, condition, and gonads of a food fish, Dormitator latifrons , were studied in the Chone River basin, Ecuador, in 1981. The river was bordered by floodplains in the upstream freshwater zone, and by mangrove swamps and shrimp farms in the downstream estuarine zone. The climate was marked by wet (January to April) and dry (May to December) seasons. During the dry season, an earth dam in the river prevented movement of water and fish between upstream and downstream zones. At the end of the dry season, most of the upstream floodplains were dry, and the main fish refuges were in downstream areas in deep pools in the river upstream. During the floods, fish migrated from downstream areas towards upstream floodplains. Growth rates and condition increased when water levels were high or salinity was low and decreased when water levels were low or salinity was high. Seasonal changes in gonads and abundance of juveniles indicated that reproduction occurred during the floods, but there was some reproduction in the dry season. Reproduction occurred in upstream and downstream zones and appeared to be stimulated by a complex of factors, including water levels, currents and salinity. The yield in flood plain sites was estimated as c. 115 kg ha⁻¹ in 1981.     

Dynamics of artisanal fisheries in two Brazilian Amazonian reserves: implications to co-management

In this study we compare the dynamics of artisanal fishery in two adjacent reserves located in the Brazilian Amazon, Mamirauá (being managed for more than 12 years) and Amanã (initiating a management process), through the record of 485 fish landings in one fishing community in each reserve during high and low water seasons in 2003. Our goals were, first, to make a rapid and comparative assessment of some main aspects of fisheries in these two communities (fish species caught, CPUE, fishing gear and habitats exploited). Second, we used such data to evaluate if management strategies already in place in Mamirauá would be also valid for Amanã. Third, we compared fishing CPUE between the two communities, in order to check if co-management measures have contributed, at least partially, to preclude over-fishing, maintaining a higher fishing reward in Mamirauá reserve. We analyzed fisheries directed to the two most important marketable fishes in the region: the pirarucu (Arapaimas gigas) and the tambaqui (Colossoma macropomum), besides those fisheries aimed to subsistence and lower valued fishes. Our results indicated that the tambaqui was intensively fished year-round in Mamirauá, while Amanã fishers caught a higher variety of fishes, including catfishes and migratory scale fishes. Such differences might reflect differences in gear used and habitat exploited by fishers during the high water season. Mamirauá fishers caught a higher fish biomass considering both marketable and all fishes. Differences in gear used, habitats exploited and fishes caught during high water season indicate that distinct management initiatives might apply for each reserve. Notwithstanding their differences, both communities exploited the commercial fishes (tambaqui and pirarucu) in a similar way during the low water season. Therefore, the higher mean fishing yield (CPUE) observed in Mamirauá may be partially attributable to co-management measures, considering that Mamirauá has possibly been experiencing a higher fishing intensity than Amanã. Fishing related data are seldom available in Brazil and other tropical developing countries. We thus provided a framework of fast assessment of fishing dynamics, which may represent a first and useful step for management initiatives in the absence of more detailed data.     

The small-scale urban reservoir fisheries of Lago Paranoá, Brasília, DF, Brazil.

In many cases in large urban centers, which have appropriate waterbodies, small-scale fisheries are the only source of cheap protein for the poor. In Lago Paranoá, located in Brasília, the capital city of Brazil, fishing was studied by conducting interviews with 53 fishers filling in logbooks from March, 1999 to March, 2000 in three fishing communities. The fishers come from the poorest towns around Brasília, known as satellite-towns. They have been living there on average for 21.7 years (s = 9.6 years), their families have 4.9 members (s = 3.6) on average and 44.2% do not have a basic education. However, such characteristics are similar to the socioeconomic indices of the metropolis where they live. In spite of being illegal between 1966 and 2000, fishing generated an average monthly income of U 239.00 dollars (s = U 171.77 dollars). The Nile Tilapia Oreocrhromis niloticus is the main captured species (85% of a total number of landings in weight of 62.5 t.). Fishing is carried out in rowing boats, individually or in pairs. The fishing equipment used are gillnets and castnets. Gillnets were used actively, whereby the surface of the water is beaten with a stick to drive Tilapias towards nets as they have the ability to swim backwards. This fishing strategy was used in 64.7% of the fisheries, followed by castnets (31.1%) and by gillnets which were used less (4.2%). The fish is sold directly in the streets and fairs of the satellite-towns to middlemen or to bar owners. Three communities have different strategies in terms of fishing equipments, fishing spots and commercialization. Consequently, there are statistically significant differences in relation to the monthly income for each one of these communities.     

Small fish, big fish, red fish, blue fish: size-biased extinction risk of the world's freshwater and marine fishes

Aim  In light of the current biodiversity crisis, there is a need to identify and protect species at greatest risk of extinction. Ecological theory and global-scale analyses of bird and mammal faunas suggest that small-bodied species are less vulnerable to extinction, yet this hypothesis remains untested for the largest group of vertebrates, fish. Here, we compare body-size distributions of freshwater and marine fishes under different levels of global extinction risk (i.e. listed as vulnerable, endangered or critically endangered according to the IUCN Red List of Threatened Species ) from different major sources of threat (habitat loss/degradation, human harvesting, invasive species and pollution).
Location  Global, freshwater and marine.
Methods  We collated maximum body length data for 22,800 freshwater and marine fishes and compared body-size frequency distributions after controlling for phylogeny.
Results  We found that large-bodied marine fishes are under greater threat of global extinction, whereas both small- and large-bodied freshwater species are more likely to be at risk. Our results support the notion that commercial fishing activities disproportionately threaten large-bodied marine and freshwater species, whereas habitat degradation and loss threaten smaller-bodied marine fishes.
Main conclusions  Our study provides compelling evidence that global fish extinction risk does not universally scale with body size. Given the central role of body size for trophic position and the functioning of food webs, human activities may have strikingly different effects on community organization and food web structure in freshwater and marine systems.     

Age, growth and mortality of Clarias gariepinus (Siluriformes: Clariidae) in the Mid-Cross River-Floodplain ecosystem, Nigeria

Clarias gariepinus is a threatened highly prized species used for some elite ceremonies by the local communities. Artisanal fishers take advantage of this species annual breeding migration from the lower Cross River to the floodplain lakes in Mid-Cross River during the rainy season, and some migrant stocks are not able to spawn. Since there is a lack of information on this species population dynamics in the Mid-Cross area, this study aimed to evaluate the age, growth and mortality to support the development of effective management plans. For this, monthly overnight gill net catches (from 6 to 72mm mesh sizes) were developed between March 2005 and February 2007. Growth parameters were determined using the FiSAT II length-frequency distribution. A total of 1 421 fish were collected during the survey. The asymptotic growth (L(infinity)) was 80.24cm, growth rate (K) was 0.49/year while the longevity was 6.12 years. The annual instantaneous rate of total mortality (Z) was 2.54/year and the natural mortality (M) was 0.88. Fishing mortality (1.66/year) was higher than the biological reference points (F(opt) = 0.83 and F(limit) = 1.11) and the exploitation rate (0.66) was higher than the predicted value (E(max) = 0.64) indicating that C. gariepinus was over exploited in the Mid-Cross River-Floodplain ecosystem. Some recommended immediate management actions are to strengthen the ban of ichthyocide fishing, closure of the floodplain lakes for most of the year, restricted access to the migratory path of the fish during the flood period and vocational training to the fishers. In order to recover and maintain a sustainable harvest, I suggest that a multi-sector stakeholder group should be formed with governmental agents, community leaders, fishers, fisheries scientists and non-governmental organizations. These short and long term measures, if carefully applied, will facilitate recovery of the fishery.     

基于环境DNA宏条形码技术的北京地区鱼类多样性调查和外来鱼种入侵风险评估

[目的]调查北京地区鱼类多样性和群落分布及评估外来鱼种的入侵风险.[方法]选取北京地区水库、湖泊和河流3种水体类型共33个采样点,于2020年6月10—17日开展水生态监测,利用环境DNA宏条形码技术对各样点的鱼类多样性和群落结构进行监测和分析,对目前北京地区水生态系统中本地鱼种和外来鱼种进行分类汇总,并评估典型外来入...     

The influence of freshwater flows on two estuarine resident fish species show differential sensitivity to the impacts of drought,flood and climate change

Estuaries are particularly susceptible to climate change and drought resulting in atypical changes to freshwater flows. How such changes in flow impact on the ecology of estuarine fishes may depend on how a species moves in response to changing flow conditions. Acoustic telemetry was used to interpret fine-scale movements of two co-inhabiting estuarine fish species, black bream, Acanthopagrus butcheri and estuary perch, Macquaria colonorum in relation to freshwater flows, season and moon phase. We found black bream to be highly mobile, regularly travelling the length of the estuary and into the neighbouring estuaries. In contrast, estuary perch had particular home ranges and made occasional, upstream or downstream movements. Possibly influenced by freshwater flows, estuary perch moved at greater rates in the Tambo compared to fish in the Mitchell. Black bream resided in the upper estuary during winter and spring and the lower estuary during summer and autumn, whereas estuary perch remained in the upper estuary throughout the year, with occasional downstream movements in winter and spring. This study revealed 1) significantly large increases in freshwater flows result in mass downstream movements in both species, 2) fish moved upstream during full moons and 3) there are contrasting spatio-temporal patterns in movement between species. The results from this study highlight that estuarine fishes are likely to show differential sensitivity to the impacts of drought and climate change and illustrate how acoustic telemetry methods can be used to determine the environmental needs of fishes and help efforts to conserve and manage estuaries worldwide.     

Seasonal and environmental influences on recruitment patterns and habitat usage among resident and transient fishes in a World Heritage Site subtropical estuary

This study investigated whether the fish communities inhabiting shallow non‐vegetated habitats in two divergent bays in a subtropical World Heritage Site estuarine system differed according to wet (spring–summer) and dry (autumn–winter) seasons or polyhaline and mesohaline zones, within the broader objective of facilitating spatio‐temporal management. Species richness (total of 74 taxa; total length, L_T = 11–552 mm) and abundance (51 109 individuals) were mostly greater in the wet than dry season and in polyhaline than mesohaline areas. There was a major effect of rainfall on recruitment, particularly among transient fishes, which could be the result of enhanced survival of young via greater productivity (food resources) and protection from predators (via turbidity reducing visual cues). Salinity had strong interactive effects with rainfall and temperature in one bay, with greater species richness and overall abundances as well as large abundances of four key species [Anchoa januaria and Atherinella brasiliensis (pelagic residents), Cetengraulis edentulus (pelagic transient) and Diapterus rhombeus (demersal transient)] during the wet season in polyhaline areas; possibly reflecting a biodiversity hotspot that might be affected by distance to the estuary mouth and convergence hydrology. Regionally, the results support enforcing spatio‐temporal restrictions to minimize anthropogenic activities within statutory (but not always enforced) protected areas. Globally, the data reiterate the need to identify and understand biotic and abiotic effects on estuarine ichthyofaunal distributions and abundances as a precursor to their management.