Analysis of stable isotope ratios to investigate stock structure of red emperor and Rankin cod in northern Western Australia

The ratios of stable isotopes ¹⁸O/¹⁶O and ¹³C/¹²C, in sagittal otolith carbonate from two tropical demersal teleosts, red emperor Lutjanus sebae and Rankin cod Epinephelis multinotatus , from several locations in northern Western Australia, differed between sites. On a broad scale, fish from the four locations, Shark Bay, Ningaloo, Pilbara, and Broome had stable isotope values that were sufficiently different to indicate separate stocks, and it is appropriate to manage these populations of the two species independently in these areas. On a smaller scale, there may be limited mixing of these species between the Pilbara trawl fishery and the trap and line fisheries operating out of Onslow and Broome. Values of stable oxygen isotopes were strongly related to sea surface temperature, although there were some sites in shallow water where low values of stable oxygen isotopes indicated that fish were living in warm water. The use of stable oxygen and carbon isotope values is a valuable, cost effective method of determining the degree of mixing of fish stocks.     

Tracing carbon and oxygen isotope signals from newly assimilated sugars in the leaves to the tree-ring archive

The analysis of δ ¹³C and δ ¹⁸O in tree-ring archives offers retrospective insights into environmental conditions and ecophysiological processes. While photosynthetic carbon isotope discrimination and evaporative oxygen isotope enrichment are well understood, we lack information on how the isotope signal is altered by downstream metabolic processes.
In Pinus sylvestris , we traced the isotopic signals from their origin in the leaf water ( δ ¹⁸O) or the newly assimilated carbon ( δ ¹³C), via phloem sugars to the tree-ring, over a time-scale that ranges from hours to a growing season.
Seasonally, variable ¹³C enrichment of sugars related to phloem loading and transport did lead to uncoupling between δ ¹³C in the tree-ring, and the c _i/ c _a ratio at the leaf level. In contrast, the oxygen isotope signal was transferred from the leaf water to the tree-ring with an expected enrichment of 27‰, with time-lags of approximately 2 weeks and with a 40% exchange between organic oxygen and xylem water oxygen during cellulose synthesis.
This integrated overview of the fate of carbon and oxygen isotope signals within the model tree species P. sylvestris provides a novel physiological basis for the interpretation of δ ¹³C and δ ¹⁸O in tree-ring ecology.     

Relationships of grain δ13C and δ18O with wheat phenology and yield under water-limited conditions

Stable carbon isotope composition (δ¹³C) of dry matter has been widely investigated as a selection tool in cereal breeding programmes. However, reports on the possibilities of using stable oxygen isotope composition (δ¹⁸O) as a yield predictor are very scarce and only in the absence of water stress. Indeed, it remains to be tested whether changes in phenology and stomatal conductance in response to water stress overrule the use of either δ¹³C or δ¹⁸O when water is limited. To answer this question, a set of 24 genotypes of bread wheat ( Triticum aestivum ) were assayed in two trials with different levels of deficit irrigation and a third trial under rainfed conditions in a Mediterranean climate (northwest Syria). Grain yield (GY) and phenology (duration from planting to anthesis and from anthesis to maturity) were recorded, and the δ¹³C and δ¹⁸O of grains were analysed to assess their suitability as GY predictors. Both δ¹³C and δ¹⁸O showed higher broad-sense heritabilities ( H ²) than GY. Genotype means of GY across trials were negatively correlated with δ¹³C, as previously reported, but not with δ¹⁸O. Both isotopes were correlated with grain filling duration, whereas δ¹⁸O was also strongly affected by crop duration from planting to anthesis. We concluded that δ¹⁸O of grains is not a proper physiological trait to breed for suboptimal water conditions, as its variability is almost entirely determined by crop phenology. In contrast, δ¹³C of grains, despite being also affected by phenology, still provides complementary information associated with GY.     

Feather stable-isotope profiles reveal stopover habitat selection and site fidelity in nine migratory species moving through sub-Saharan Africa

Stable nitrogen (δ¹⁵N), carbon (δ¹³C) and hydrogen (δD) isotope profiles in feathers of nine migratory bird species trapped in Kenya were examined to test the extent to which they were segregated, geographically or by habitat, during an earlier autumn migration stopover in northeast Africa. We examined whether isotopic differences between species varied between years, and whether the isotope profiles of individual species appeared to be consistent. The relationship between mean feather δ¹³C, δ¹⁵N and δD assorted the migrants into several clustered groups. Similar feather isotope values among successive years revealed that each species tended to return to the same or similar stopover areas and selected habitat and diet that generated similar isotopic signatures. Possible explanations are discussed for the existence of these isotopic groups.     

四川裂腹鱼耳石碳、氧稳定同位素特征

为探讨耳石碳(δ¹³C)、氧(δ¹⁸O)稳定同位素在淡水鱼类群体识别中的作用,本研究以养殖条件下不同年龄组四川裂腹鱼为对象,采用稳定同位素质谱仪进行碳、氧同位素测定,揭示耳石中碳、氧稳定同位素特征,探讨其与环境间的关系. 结果表明:1⁺龄四川裂腹鱼δ¹³C和δ¹⁸O值均与耳石质量无显著相关关系,但在微耳石和星耳石之间存在显著差异;不同年龄四川裂腹鱼微耳石δ¹³C和δ¹⁸O平均值分别为(-9.58±0.06)‰、(-8.33±0.17)‰,其在雌雄个体之间均无显著性差异,但在不同年龄组间存在显著差异. 耳石δ¹⁸O和δ¹³C的关联分析能有效区分四川裂腹鱼不同养殖年龄群体,可作为一种识别淡水鱼类养殖群体的手段.     

Trophic relationships in a tropical stream food web assessed by stable isotope analysis

1. Stable isotope analysis, coupled with dietary data from the literature, was used to investigate trophic patterns of freshwater fauna in a tropical stream food web (Guadeloupe, French West Indies).
2. Primary producers (biofilm, algae and plant detritus of terrestrial origin) showed distinct δ¹³C signatures, which allowed for a powerful discrimination of carbon sources. Both autochthonous (¹³C-enriched signatures) and allochthonous (¹³C-depleted signatures) resources enter the food web. The migrating behaviour of fishes and shrimps between marine and freshwater during their life cycles can be followed by carbon isotopes. Here, shrimp δ¹³C signatures were shown to shift from −16‰ (for juveniles under marine influence) to −24.7‰ (for adults in freshwater habitats). For resident species, δ¹³C values partly reflected the species' habitat preferences along the river continuum : species living in river mouths were ¹³C-enriched in comparison with those collected upstream.
3. Nitrogen isotopic ratios were also discriminating and defined three main trophic guilds among consumers. The δ¹⁵N values of herbivores/detritivores were 5.0–8.4‰, omnivores 8.8–10.2‰ and carnivores 11–12.7‰.
4. Mixing model equations were employed to calculate the possible range of contribution made by respective food sources to the diet of each species. The results revealed the importance of omnivorous species and the dependence of riverine biota on terrestrial subsidies, such as leaf detritus and fruits. Finally, the abundance of shrimps and their feeding habits placed in relief their key role in tropical freshwater food webs. Isotopic analysis provides a useful tool for assessing animal feeding patterns.     

The diet of ruffe Gymnocephalus cernuus (L.) in northern lakes: new insights from stable isotope analyses

The diet of ruffe Gymnocephalus cernuus was studied in two native populations in lakes of different productivity in south-west Finland using both traditional stomach content analyses and stable isotopes. According to stomach content analyses, chironomids were the most important prey type in both lakes and the diversity of the other prey reflected the zoobenthos community in the lake. Stable isotope analyses of carbon and nitrogen showed distinctive lake-specific and total length ( L _T)-related patterns in both δ¹³C and δ¹⁵N values, which could not be explained solely with diet changes. In the large mesotrophic Pyhäjärvi, both ¹³C and ¹⁵N isotopes became slightly enriched with increasing ruffe L _T, although stomach contents analyses did not suggest any diet change in larger ruffe. In the hypereutrophic Köyliönjärvi, the carbon isotope signatures of ruffe especially showed wide variation (−33·5 to −24·1‰), which was probably due to variable consumption of prey items with highly negative carbon isotope signatures. Overall, this study emphasizes that the interpretation of stable isotope results requires extensive background data of the system and that even then the diet composition of a consumer may be very difficult to define due to large variation in the signatures.     

Continuous variation in the pattern of marine v. freshwater foraging in brown trout Salmo trutta L. from Loch Lomond, Scotland

Carbon stable-isotope analysis showed that individual brown trout Salmo trutta in Loch Lomond adopted strategies intermediate to that of freshwater residency or anadromy, suggesting either repeated movement between freshwater and marine environments, or estuarine residency. Carbon stable-isotope (δ¹³C) values from Loch Lomond brown trout muscle tissue ranged from those indicative of assimilation of purely freshwater-derived carbon to those reflecting significant utilization of marine-derived carbon. A single isotope, two-source mixing model indicated that, on average, marine C made a 33% contribution to the muscle tissue C of Loch Lomond brown trout. Nitrogen stable isotope, δ¹⁵N, but not δ¹³C was correlated with fork length suggesting that larger fish were feeding at a higher trophic level but that marine feeding was not indicated by larger body size. These results are discussed with reference to migration patterns in other species.     

Physiological and isotopic (δ13C and δ18O) responses of three tropical tree species to water and nutrient availability

Water-use efficiency and stable isotope composition were studied in three tropical tree species. Seedlings of Tectona grandis , Swietenia macrophylla and Platymiscium pinnatum were grown at either high or low water supply, and with or without added fertilizer. These three species previously exhibited low, intermediate and high whole-plant water-use efficiency ( TE ) when grown at high water supply in unfertilized soil. Responses of TE to water and nutrient availability varied among species. The TE was calculated as experiment-long dry matter production divided by cumulative water use. Species-specific offsets were observed in relationships between TE and whole-plant ¹³C discrimination (Δ¹³C_p). These offsets could be attributed to a breakdown in the relationship between Δ¹³C_p and the ratio of intercellular to ambient CO₂ partial pressures ( c _i/ c _a) in P. pinnatum , and to variation among species in the leaf-to-air vapour pressure difference ( v ). Thus, a plot of v · TE against c _i/ c _a showed a general relationship among species. Relationships between δ ¹⁸O of stem dry matter and stomatal conductance ranged from strongly negative for S. macrophylla to no relationship for T. grandis . Results suggest inter-specific variation among tropical tree species in relationships between stable isotope ratios ( δ ¹³C and δ ¹⁸O) and the gas exchange processes thought to affect them.     

The effects of preservation on fish tissue stable isotope signatures

The effects of formalin and ethanol preservation on the δ¹³C and δ¹⁵N isotope signatures of Arctic charr Salvelinus alpinus muscle tissue were examined. The lipid content of the tissue samples studied ranged from 3·6 to 6·1% and was not correlated with the magnitude of observed isotopic shifts in preserved samples. Ethanol and formalin significantly depleted and enriched, respectively, the δ¹³C isotope signatures of preserved tissues when compared to control samples. Ethanol did not significantly enrich δ¹⁵N signatures in comparison to controls, whereas formalin did. A meta-analysis of multiple species effects further demonstrated significant preservation effects in fish tissue. Statistical analysis of data obtained by correcting preserved tissue isotope signatures with literature, bootstrapped or meta-analysis derived correction factors demonstrated significant differences between corrected and control sample isotope signatures or failure to produce a unity slope when the data sets were regressed against one another. Species-specific, bootstrapped linear correction models resulted in no such errors. Results suggest that species-specific correction methods should be used for fishes because of the known wide variation in fish tissue lipid content and composition. Accordingly, the use of pilot studies will be required to develop correction factors that properly adjust for preservation effects when interpreting temporal patterns in historic analyses of food webs.     

Stable isotopes identify the natal origins of a generalist brood parasite, the brown-headed cowbird Molothrus ater

Identifying the natal origins of brood parasites is a major challenge that usually requires labor-intensive searching for nests of host species. Stable isotope analysis of feathers and other body tissues of parasitic young could be a possible tool for determining natal origins if tissues reflect the isotopic composition of the diet fed to nestlings. We measured the carbon (¹³C) and nitrogen (¹⁵N) isotope compositions of feathers for two age-classes of brown-headed cowbirds Molothrus ater at the Konza Prairie Biological Station near Manhattan, Kansas: nestlings raised by five species of songbird hosts in two different habitats, and juveniles captured after independence. Isotope values from cowbird nestlings did not differ among host species and we were unable to assign juvenile cowbirds to their natal hosts. However, nestlings raised in grassland habitat had feathers that contained significantly higher δ¹³C values and lower δ¹⁵N values than nestlings raised in shrub habitats. In addition, independent juveniles had isotopic signatures that were similar to cowbird nestlings raised on shrub habitats. Although dickcissel Spiza americana comprised the majority of samples from shrub habitats, our conclusions reflect the natural pattern of parasitism at the site and should be representative of cowbirds raised at Konza. We conclude that stable isotope analysis of feathers is effective for determining the natal origins of parasitic young if isotope values from nestlings are isotopically distinct among habitats.     

Bulk leaf δ18O and δ13C reflect the intensity of intraspecific competition for water in a semi-arid tussock grassland

We investigated the extent to which plant water and nutrient status are affected by intraspecific competition intensity and microsite quality in a monodominant tussock grassland. Leaf gas exchange and stable isotope measurements were used to assess the water relations of Stipa tenacissima tussocks growing along a gradient of plant cover and soil depth in a semi-arid catchment of Southeast Spain. Stomatal conductance and photosynthetic rate decreased with increasing intensity of competition during the wet growing season, leading to foliar δ ¹⁸O and δ ¹³C enrichment. A high potential for runoff interception by upslope neighbours exerted strong detrimental effects on the water and phosphorus status of downslope S. tenacissima tussocks. Foliar δ ¹⁵N values became more enriched with increasing soil depth. Multiple stepwise regression showed that competition potential and/or rhizosphere soil depth accounted for large proportions of variance in foliar δ ¹³C, δ ¹⁸O and δ ¹⁵N among target tussocks (57, 37 and 64%, respectively). The results presented here highlight the key role that spatial redistribution of resources (water and nutrients) by runoff plays in semi-arid ecosystems. It is concluded that combined measurement of δ ¹³C, δ ¹⁸O and nutrient concentrations in bulk leaf tissue can provide insight into the intensity of competitive interactions occurring in natural plant communities.     

Natural 13C and 15N abundance of field-collected fungi and their ecological implications

The natural abundance of ¹³C and ¹⁵N was measured in basidiocarps of at least 115 species in 88 genera of ectomycorrhizal, wood-decomposing and litter-decomposing fungi from Japan and Malaysia. The natural abundance of ¹³C and ¹⁵N was also measured in leaves, litter, soil and wood from three different sites. ¹⁵N and ¹³C were enriched in ectomycorrhizal and wood-decomposing fungi, respectively, relative to their substrates. Ectomycorrhizal and wood-decomposing fungi could be distinguished on the basis of their δ¹³C and δ¹⁵N signatures. Although there was high variability in the isotopic composition of fungi, the following isotope- enrichment factors (ε, mean±SD) of the fungi relative to substrates were observed:
ε_{ectomycorrhizal fungi/litter} = 6.1±0.4‰¹⁵N
ε_{ectomycorrhizal fungi/wood} = 1.4±0.8‰¹³C
ε_{wood-decomposing fungi/wood} = −0.6±0.7‰¹⁵N
ε_{wood-decomposing fungi/wood} = 3.5±0.9‰¹³C
The basis of isotope fractionation in C metabolism from wood to wood-decomposing fungus is discussed.     

Stable isotope variability of meso-zooplankton along a gradient of dissolved organic carbon

1.  The δ¹³C and δ¹⁵N signatures of zooplankton vary with dissolved organic carbon (DOC), but inconsistent and limited taxonomic resolution of previous studies have masked differences that may exist among orders, genera or species and are attributable to dietary and/or habitat differences. Here we investigate differences among the isotopic signatures of five zooplankton taxa ( Daphnia , Holopedium , large Calanoida, small Calanoida and Cyclopoida) in Precambrian shield lakes with a sixfold range of DOC concentration.
2.  δ¹³C signatures of Daphnia , small calanoids and large calanoids became more depleted with increasing lake DOC, whereas Holopedium and cyclopoid δ¹³C became enriched with increasing DOC concentration.
3.  The variability of δ¹³C and δ¹⁵N isotopic signatures among zooplankton groups was reduced in high-DOC, compared to low-DOC lakes, especially for δ¹³C. Differences in δ¹³C and POM-corrected δ¹⁵N accounted for up to 33.7% and 19.5% of the variance, respectively, among lakes of varying DOC concentration.
4.  The narrow range of signatures found in higher DOC lakes suggests that different taxa have similar food sources and/or habitats. In contrast, the wide range of signatures in low-DOC lakes suggests that different taxa are exploiting different food sources and/or habitats. Together with the variable trends in zooplankton isotopic signatures along our DOC gradient, these results suggest that food web dynamics within the zooplankton community of temperate lakes will change as climate and lake DOC concentrations change.     

Evidence for secondary planktonic transport of post‐larvae of seagrass‐associated King George whiting

Stomach contents and stable isotope analyses were used to determine if secondary planktonic dispersal of King George whiting Sillaginodes punctata post‐larvae from shallow inshore habitats in a large embayment in south‐eastern Australia was initiated by wave disturbance. Benthic harpacticoid copepods, which live in and amongst seagrass shoots, were found in the stomachs of S. punctata caught offshore in the plankton only during rough weather. Stable isotope analyses showed that the base of nutritional support, estimated from values of δ¹³C, of S. punctata collected in the plankton changed significantly during rough (waves > 0·25 m) compared to calm (waves < 0·25 m) weather conditions. Values of δ¹³C collected from S. punctata in the plankton during rough weather were more consistent with S. punctata values found in the seagrass. Sillaginodes punctata collected in the plankton and seagrass during rough and calm weather failed to show differences in δ¹⁵N values. Dietary and isotope analyses support a model whereby newly arrived S. punctata larvae can be resuspended from seagrass beds and dispersed offshore by wave action during onshore winds. Secondary planktonic dispersal in S. punctata would provide a mechanism by which seagrass beds further inside Port Phillip Bay are colonized.     

Effects of water stress and nocturnal temperature on carbon allocation in the perennial grass, Leymus chinensis

Water deficit and high temperature often occur simultaneously, but their effects on plants are usually investigated separately. The aim of this study was to test how interactions between water stress and nocturnal warming affect carbon allocation in the perennial grass, Leymus chinensis . Plant biomass, dry mass allocation, ¹⁴C partitioning and carbon isotope composition (δ¹³C) were measured. Severe and extreme water stress during nocturnal warming decreased the allocation of dry mass and ¹⁴C partitioning below ground to the roots, but moderate water stress significantly increased the below-ground allocation of dry mass and ¹⁴C, especially at the lower night temperature. The δ¹³C values were more positive at day/night temperatures of 30/20°C than at 30/25°C, and greater in the roots than in the leaves. By plotting the δ¹³C values of the leaves against the δ¹³C values of the roots, the slopes of regressions were steeper at low than at high night temperature, also indicating that nocturnal warming reduces carbon allocation below ground to the roots. The results suggest that nocturnal warming may weaken acclimation during water stress in this species by regulating carbon allocation between source and sink organs.     

Stable Isotopes and Carbon Cycle Processes in Forests and Grasslands

Abstract: Scaling and partitioning are frequently two difficult challenges facing ecology today. With regard to ecosystem carbon balance studies, ecologists and atmospheric scientists are often interested in asking how fluxes of carbon dioxide scale across the landscape, region and continent. Yet at the same time, physiological ecologists and ecosystem ecologists are interested in dissecting the net ecosystem CO₂ exchange between the biosphere and the atmosphere to achieve a better understanding of the balance between photosynthesis and respiration within a forest. In both of these multiple-scale ecological questions, stable isotope analyses of carbon dioxide can play a central role in influencing our understanding of the extent to which terrestrial ecosystems are carbon sinks. In this synthesis, we review the theory and present field evidence to address isotopic scaling of CO₂ fluxes. We first show that the ¹³C isotopic signal which ecosystems impart to the atmosphere does not remain constant over time at either temporal or spatial scales. The relative balances of different biological activities and plant responses to stress result in dynamic changes in the ¹³C isotopic exchange between the biosphere and atmosphere, with both seasonal and stand-age factors playing major roles influencing the ¹³C biosphere-atmosphere exchange. We then examine how stable isotopes are used to partition net ecosystem exchange fluxes in order to calculate shifts in the balance of photosynthesis and respiration. Lastly, we explore how fundamental differences in the ¹⁸O isotopic gas exchange of forest and grassland ecosystems can be used to further partition terrestrial fluxes.     

13C/12C isotope fractionation of aromatic hydrocarbons during microbial degradation

The influence of microbial degradation on the ¹³C/¹²C isotope composition of aromatic hydrocarbons is presented using toluene as a model compound. Four different toluene-degrading bacterial strains grown in batch culture with oxygen, nitrate, ferric iron or sulphate as electron acceptors were studied as representatives of different environmental redox conditions potentially prevailing in contaminated aquifers. The biological degradation induced isotope shifts in the residual, non-degraded toluene fraction and the kinetic isotope fractionation factors αC for toluene degradation by Pseudomonas putida (1.0026 ± 0.00017), Thauera aromatica (1.0017 ± 0.00015), Geobacter metallireducens (1.0018 ± 0.00029) and the sulphate-reducing strain TRM1 (1.0017 ± 0.00016) were in the same range for all four species, although they use at least two different degradation pathways. A similar ¹³C/¹²C isotope fractionation factor (αC = 1.0015 ± 0.00015) was observed in situ in a non-sterile soil column in which toluene was degraded under sulphate-reducing conditions. No carbon isotope shifts resulting from soil–hydrocarbon interactions were observed in a non-degrading soil column control with aquifer material under the same conditions. The results imply that microbial degradation of toluene can produce a ¹³C/¹²C isotope fractionation in the residual hydrocarbon fraction under different environmental conditions.     

Seasonal and annual changes in leaf δ13C in two co-occurring Mediterranean oaks: relations to leaf growth and drought progression

1. Changes of δ¹³C and its relation to leaf development, biochemical content and water stress were monitored over a 2 year period in two co-occurring Mediterranean oak species: the deciduous Quercus pubescens and the evergreen Quercus ilex .
2. The time course of leaf δ¹³C showed different patterns in the two species. Young Q. pubescens leaves had a high δ¹³C and a marked decrease occurred during leaf growth. In contrast, leaves at budburst and maturity did not differ significantly in the case of Q. ilex . We suggest that the difference between δ¹³C of young leaves was linked to differential use of reserves of carbon compounds in the two species.
3. δ¹³C values of mature leaves were negatively correlated with minimum seasonal values of predawn water potential, suggesting that a functional adjustment to water resources occurred.
4. There was a significant correlation between individual δ¹³C values for two successive years. This interannual dependence showed that δ¹³C rankings between trees were constant through time.     

Photosynthesis in Salsola Species (Chenopodiaceae) from Southern Africa Relative to their C4 Syndrome Origin and their African-Asian Arid Zone Migration Pathways

Abstract: Over 60 Salsola species of Chenopodiaceae from South Africa were studied for their photosynthesis type, using δ¹³C analysis and light microscopy of leaf anatomy. These species cover about 70 % of the total list of Southern African Salsola species and grow naturally in South and Southwest African desert regions. All species are shrubby forms and belong to the single subsection Caroxylon. Only C₄ photosynthesis was found in the Salsola species determined with ¹³C/¹²C carbon isotope discrimination values that ranged from - 11.04 to - 14.03 % (PDB), plus the presence of a Kranz type assimilation tissue anatomy. The apparent absence of C₃ in Salsola in South and Southwest Africa and the known presence of C₃ and C₃ - C₄ intermediate photosynthesis in Caroxylon, Salsola species in Asia strongly indicate that the genus Salsola originated in Asia and later migrated to South Africa.